View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1450_low_24 (Length: 250)

Name: NF1450_low_24
Description: NF1450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1450_low_24
NF1450_low_24
[»] scaffold0347 (2 HSPs)
scaffold0347 (18-239)||(14441-14663)
scaffold0347 (138-239)||(13639-13740)
[»] chr1 (70 HSPs)
chr1 (69-235)||(25065858-25066024)
chr1 (127-232)||(25064970-25065075)
chr1 (137-239)||(13295165-13295267)
chr1 (111-183)||(34850335-34850407)
chr1 (129-239)||(46282753-46282863)
chr1 (169-239)||(49093071-49093141)
chr1 (32-81)||(25065797-25065846)
chr1 (188-236)||(32619417-32619465)
chr1 (188-236)||(32622375-32622423)
chr1 (111-179)||(37578462-37578530)
chr1 (111-178)||(24009811-24009878)
chr1 (189-239)||(50062968-50063018)
chr1 (111-178)||(14879062-14879129)
chr1 (127-178)||(32917351-32917402)
chr1 (188-231)||(46282109-46282152)
chr1 (188-231)||(49093832-49093875)
chr1 (189-239)||(32238729-32238779)
chr1 (137-178)||(1841550-1841591)
chr1 (113-178)||(6367653-6367718)
chr1 (188-233)||(51935218-51935263)
chr1 (134-178)||(1103552-1103596)
chr1 (169-232)||(2829539-2829602)
chr1 (111-178)||(4960631-4960698)
chr1 (162-233)||(6345630-6345701)
chr1 (132-183)||(10304009-10304060)
chr1 (132-183)||(10304146-10304197)
chr1 (120-183)||(34849097-34849160)
chr1 (127-178)||(40210656-40210707)
chr1 (111-178)||(46163121-46163188)
chr1 (124-175)||(48691242-48691293)
chr1 (169-239)||(10019657-10019727)
chr1 (137-179)||(31514582-31514624)
chr1 (137-178)||(183487-183528)
chr1 (137-178)||(4716733-4716774)
chr1 (188-233)||(6344291-6344336)
chr1 (111-183)||(9443658-9443731)
chr1 (122-183)||(13245936-13245997)
chr1 (113-178)||(13914339-13914404)
chr1 (137-178)||(24905432-24905473)
chr1 (137-178)||(25647975-25648016)
chr1 (111-196)||(27999121-27999206)
chr1 (137-178)||(28011454-28011495)
chr1 (137-178)||(33442859-33442900)
chr1 (137-178)||(36694544-36694585)
chr1 (137-178)||(36710645-36710686)
chr1 (137-178)||(42248564-42248605)
chr1 (138-183)||(42267389-42267434)
chr1 (140-184)||(16970834-16970878)
chr1 (190-226)||(50062246-50062282)
chr1 (127-178)||(17662136-17662187)
chr1 (192-239)||(28534820-28534867)
chr1 (139-178)||(40772598-40772637)
chr1 (111-178)||(41098824-41098891)
chr1 (111-178)||(43758913-43758980)
chr1 (111-178)||(44523406-44523473)
chr1 (169-239)||(5183790-5183860)
chr1 (197-239)||(13295608-13295650)
chr1 (189-235)||(24701573-24701619)
chr1 (113-178)||(19017901-19017966)
chr1 (137-178)||(19515910-19515951)
chr1 (122-183)||(21444680-21444741)
chr1 (122-183)||(22103787-22103848)
chr1 (137-178)||(26024514-26024555)
chr1 (137-178)||(30711418-30711459)
chr1 (137-178)||(34464745-34464786)
chr1 (137-178)||(35152434-35152475)
chr1 (137-178)||(47999388-47999429)
chr1 (137-178)||(52134159-52134200)
chr1 (169-233)||(2828229-2828293)
chr1 (111-179)||(35152613-35152681)
[»] chr7 (47 HSPs)
chr7 (127-239)||(38643580-38643692)
chr7 (69-239)||(38644571-38644730)
chr7 (111-239)||(45915750-45915878)
chr7 (133-239)||(47558060-47558166)
chr7 (137-237)||(12644101-12644201)
chr7 (129-239)||(4227132-4227242)
chr7 (137-239)||(12643130-12643232)
chr7 (137-239)||(4226155-4226257)
chr7 (169-239)||(7158261-7158331)
chr7 (169-239)||(12929317-12929387)
chr7 (137-239)||(45914556-45914656)
chr7 (188-239)||(37284139-37284190)
chr7 (169-239)||(12930802-12930872)
chr7 (188-239)||(37289329-37289380)
chr7 (32-85)||(43123398-43123451)
chr7 (111-178)||(2640448-2640515)
chr7 (111-178)||(5457177-5457244)
chr7 (188-239)||(22661387-22661438)
chr7 (127-178)||(32053429-32053480)
chr7 (137-239)||(27480017-27480119)
chr7 (111-178)||(23181264-23181331)
chr7 (111-178)||(24388910-24388977)
chr7 (111-178)||(28469278-28469345)
chr7 (111-178)||(40379860-40379927)
chr7 (113-178)||(3914229-3914294)
chr7 (133-178)||(6571104-6571149)
chr7 (137-178)||(17102111-17102152)
chr7 (137-178)||(27396891-27396932)
chr7 (137-178)||(27991830-27991871)
chr7 (137-178)||(30948425-30948466)
chr7 (137-178)||(32680860-32680901)
chr7 (137-178)||(42731510-42731551)
chr7 (137-178)||(45010900-45010941)
chr7 (100-156)||(22539252-22539308)
chr7 (111-178)||(10935885-10935952)
chr7 (116-183)||(11397464-11397531)
chr7 (188-239)||(27480766-27480817)
chr7 (188-239)||(37563657-37563708)
chr7 (169-239)||(43937924-43937994)
chr7 (137-178)||(22871573-22871614)
chr7 (137-178)||(32299001-32299042)
chr7 (137-178)||(34928915-34928956)
chr7 (111-172)||(37656949-37657010)
chr7 (137-178)||(39686799-39686840)
chr7 (137-178)||(45010689-45010730)
chr7 (169-233)||(12931022-12931086)
chr7 (131-183)||(13311323-13311375)
[»] chr5 (57 HSPs)
chr5 (137-239)||(22870430-22870532)
chr5 (137-239)||(22869635-22869737)
chr5 (137-239)||(20856962-20857064)
chr5 (137-239)||(20857515-20857617)
chr5 (129-239)||(36476795-36476905)
chr5 (169-233)||(14744730-14744794)
chr5 (192-239)||(31107961-31108008)
chr5 (137-239)||(20072151-20072253)
chr5 (149-239)||(36477356-36477446)
chr5 (169-231)||(39402148-39402210)
chr5 (111-183)||(14848976-14849049)
chr5 (188-236)||(21978036-21978084)
chr5 (111-178)||(13962955-13963022)
chr5 (188-239)||(16532923-16532974)
chr5 (111-178)||(19892578-19892645)
chr5 (188-231)||(20072888-20072931)
chr5 (127-178)||(35512239-35512290)
chr5 (111-178)||(38442159-38442226)
chr5 (188-231)||(39181095-39181138)
chr5 (188-231)||(39181815-39181858)
chr5 (113-178)||(29646634-29646699)
chr5 (113-178)||(32242333-32242398)
chr5 (134-178)||(8322495-8322539)
chr5 (191-239)||(8654137-8654185)
chr5 (134-178)||(35920477-35920521)
chr5 (127-178)||(5024304-5024355)
chr5 (111-178)||(11047528-11047595)
chr5 (111-178)||(13362498-13362565)
chr5 (188-239)||(16533644-16533695)
chr5 (111-178)||(39453391-39453458)
chr5 (169-235)||(21978971-21979037)
chr5 (132-178)||(38475290-38475336)
chr5 (137-178)||(297279-297320)
chr5 (137-178)||(3529138-3529179)
chr5 (137-178)||(5993980-5994021)
chr5 (137-178)||(6758130-6758171)
chr5 (137-178)||(14194719-14194760)
chr5 (137-178)||(28269684-28269725)
chr5 (137-178)||(28771134-28771175)
chr5 (137-178)||(31482667-31482708)
chr5 (137-178)||(41930607-41930648)
chr5 (127-183)||(12904840-12904896)
chr5 (169-233)||(31108338-31108402)
chr5 (188-239)||(8673777-8673828)
chr5 (111-178)||(10684030-10684097)
chr5 (200-239)||(33735343-33735382)
chr5 (140-178)||(6150545-6150583)
chr5 (169-239)||(14745478-14745548)
chr5 (169-239)||(21260895-21260965)
chr5 (190-236)||(21972123-21972168)
chr5 (128-178)||(24547412-24547462)
chr5 (169-239)||(37945024-37945094)
chr5 (137-178)||(1506058-1506099)
chr5 (137-178)||(27587239-27587280)
chr5 (138-178)||(186510-186550)
chr5 (169-233)||(25253122-25253186)
chr5 (169-233)||(25316912-25316976)
[»] chr2 (47 HSPs)
chr2 (137-239)||(25623318-25623420)
chr2 (129-239)||(25624393-25624503)
chr2 (169-239)||(24387381-24387451)
chr2 (188-239)||(20101800-20101851)
chr2 (137-231)||(29958515-29958609)
chr2 (186-239)||(20103161-20103214)
chr2 (168-232)||(24388255-24388319)
chr2 (188-239)||(20982554-20982605)
chr2 (188-239)||(29957847-29957898)
chr2 (113-178)||(36755184-36755249)
chr2 (188-231)||(20983280-20983323)
chr2 (169-239)||(19620793-19620863)
chr2 (122-183)||(11721371-11721432)
chr2 (113-178)||(37895619-37895684)
chr2 (127-178)||(15848179-15848230)
chr2 (132-183)||(17266484-17266535)
chr2 (91-178)||(25893468-25893555)
chr2 (111-178)||(36382252-36382319)
chr2 (111-178)||(39423606-39423673)
chr2 (196-239)||(43236534-43236577)
chr2 (121-183)||(10840562-10840624)
chr2 (133-178)||(1696001-1696046)
chr2 (137-178)||(6657969-6658010)
chr2 (137-178)||(11163319-11163360)
chr2 (137-178)||(14900748-14900789)
chr2 (137-178)||(16099146-16099187)
chr2 (137-178)||(33739794-33739835)
chr2 (113-178)||(34447904-34447968)
chr2 (137-178)||(39498401-39498442)
chr2 (137-178)||(44714057-44714098)
chr2 (135-183)||(17266624-17266672)
chr2 (91-154)||(6573656-6573719)
chr2 (111-178)||(10712814-10712881)
chr2 (200-239)||(21103111-21103150)
chr2 (196-239)||(43237747-43237790)
chr2 (169-239)||(10446862-10446932)
chr2 (169-239)||(16367247-16367317)
chr2 (113-178)||(2318249-2318314)
chr2 (133-178)||(6573137-6573182)
chr2 (113-186)||(11349477-11349550)
chr2 (122-183)||(11689627-11689688)
chr2 (137-178)||(13995938-13995979)
chr2 (137-178)||(33062315-33062356)
chr2 (137-178)||(36479809-36479850)
chr2 (137-178)||(41248824-41248865)
chr2 (191-239)||(9694048-9694096)
chr2 (111-179)||(44044204-44044272)
[»] chr3 (51 HSPs)
chr3 (133-239)||(29192957-29193063)
chr3 (137-239)||(32717073-32717175)
chr3 (137-239)||(29192065-29192167)
chr3 (188-236)||(44476082-44476130)
chr3 (188-239)||(22736709-22736760)
chr3 (111-178)||(33156264-33156331)
chr3 (188-239)||(45279303-45279354)
chr3 (188-239)||(48188408-48188459)
chr3 (137-239)||(2943944-2944045)
chr3 (137-231)||(11025975-11026069)
chr3 (149-239)||(37249229-37249319)
chr3 (113-178)||(23458251-23458316)
chr3 (188-236)||(44481972-44482020)
chr3 (188-239)||(1756580-1756631)
chr3 (188-239)||(1757323-1757374)
chr3 (188-239)||(2944685-2944736)
chr3 (111-178)||(9294228-9294295)
chr3 (188-239)||(11026651-11026702)
chr3 (127-178)||(26463884-26463935)
chr3 (111-178)||(33689649-33689716)
chr3 (188-239)||(37249817-37249868)
chr3 (188-239)||(43105263-43105314)
chr3 (188-239)||(43105853-43105904)
chr3 (111-178)||(43384374-43384441)
chr3 (188-239)||(45278574-45278625)
chr3 (188-239)||(48189118-48189169)
chr3 (137-178)||(19741188-19741229)
chr3 (153-234)||(32716284-32716365)
chr3 (127-183)||(41988048-41988104)
chr3 (111-178)||(40758235-40758302)
chr3 (132-178)||(40033747-40033793)
chr3 (128-178)||(51994173-51994223)
chr3 (137-178)||(2796270-2796311)
chr3 (137-178)||(8041707-8041748)
chr3 (137-178)||(10770756-10770797)
chr3 (40-85)||(21783621-21783666)
chr3 (137-178)||(36314563-36314604)
chr3 (137-178)||(48322642-48322683)
chr3 (137-178)||(54466514-54466555)
chr3 (134-178)||(40506080-40506124)
chr3 (111-178)||(25108365-25108432)
chr3 (128-183)||(44654790-44654845)
chr3 (112-178)||(25107304-25107370)
chr3 (122-183)||(20704608-20704669)
chr3 (188-225)||(22735403-22735440)
chr3 (137-178)||(46474906-46474947)
chr3 (127-183)||(39399378-39399434)
chr3 (191-239)||(46670561-46670609)
chr3 (127-183)||(54317917-54317973)
chr3 (167-239)||(55036699-55036771)
chr3 (138-178)||(55052545-55052585)
[»] chr6 (32 HSPs)
chr6 (129-239)||(4117507-4117617)
chr6 (169-239)||(33401126-33401196)
chr6 (131-239)||(4116829-4116937)
chr6 (169-239)||(17784385-17784455)
chr6 (137-231)||(14656518-14656612)
chr6 (188-239)||(8427384-8427435)
chr6 (188-239)||(33399996-33400047)
chr6 (192-239)||(1661453-1661500)
chr6 (188-239)||(14657228-14657279)
chr6 (111-178)||(21627983-21628050)
chr6 (111-178)||(30803952-30804019)
chr6 (111-178)||(33517625-33517692)
chr6 (111-178)||(33647054-33647121)
chr6 (169-239)||(23291774-23291844)
chr6 (137-178)||(12080727-12080768)
chr6 (137-178)||(28000650-28000691)
chr6 (137-178)||(30337540-30337581)
chr6 (111-179)||(679956-680024)
chr6 (169-233)||(5064371-5064435)
chr6 (111-178)||(30725850-30725917)
chr6 (169-239)||(13480238-13480308)
chr6 (169-239)||(13480492-13480562)
chr6 (137-178)||(363095-363136)
chr6 (122-183)||(1215147-1215208)
chr6 (137-178)||(3059348-3059389)
chr6 (137-178)||(14196880-14196921)
chr6 (137-178)||(17734459-17734500)
chr6 (111-179)||(680998-681066)
chr6 (169-233)||(20994975-20995039)
chr6 (122-178)||(26463270-26463326)
chr6 (114-178)||(28498298-28498362)
chr6 (114-178)||(29810709-29810773)
[»] chr4 (60 HSPs)
chr4 (137-239)||(23455657-23455759)
chr4 (153-239)||(23454984-23455070)
chr4 (113-183)||(48528558-48528628)
chr4 (149-239)||(38982576-38982666)
chr4 (169-239)||(53477080-53477150)
chr4 (111-179)||(16605692-16605760)
chr4 (111-178)||(35028268-35028335)
chr4 (188-239)||(38813584-38813635)
chr4 (188-238)||(38814346-38814396)
chr4 (188-233)||(54591597-54591642)
chr4 (111-178)||(14801827-14801894)
chr4 (188-239)||(52816442-52816493)
chr4 (188-239)||(56556612-56556663)
chr4 (188-239)||(56557344-56557395)
chr4 (91-177)||(54435347-54435433)
chr4 (137-178)||(37976449-37976490)
chr4 (133-178)||(50418929-50418974)
chr4 (127-175)||(17356208-17356256)
chr4 (127-183)||(52298112-52298168)
chr4 (111-178)||(15507943-15508010)
chr4 (127-178)||(34765666-34765717)
chr4 (120-183)||(48529855-48529918)
chr4 (188-239)||(52815693-52815744)
chr4 (137-179)||(4982991-4983033)
chr4 (132-178)||(16005929-16005975)
chr4 (132-178)||(44967329-44967375)
chr4 (113-171)||(53129778-53129836)
chr4 (112-178)||(53701903-53701969)
chr4 (169-239)||(54590173-54590243)
chr4 (137-178)||(9145031-9145072)
chr4 (137-178)||(13058128-13058169)
chr4 (194-239)||(13336863-13336908)
chr4 (137-178)||(18831440-18831481)
chr4 (137-178)||(23613400-23613441)
chr4 (137-178)||(27934623-27934664)
chr4 (137-178)||(32950233-32950274)
chr4 (137-178)||(36009109-36009150)
chr4 (137-178)||(37248327-37248368)
chr4 (137-178)||(42738296-42738337)
chr4 (137-178)||(43155792-43155833)
chr4 (137-178)||(49879472-49879513)
chr4 (127-179)||(10781770-10781822)
chr4 (127-179)||(24349764-24349816)
chr4 (138-178)||(24711202-24711242)
chr4 (138-178)||(54086992-54087032)
chr4 (188-239)||(55013108-55013158)
chr4 (169-239)||(12691436-12691506)
chr4 (137-178)||(5369038-5369079)
chr4 (137-178)||(9400784-9400825)
chr4 (137-178)||(22566890-22566931)
chr4 (194-239)||(22882352-22882397)
chr4 (194-239)||(22934016-22934061)
chr4 (137-178)||(33247538-33247579)
chr4 (137-178)||(34837339-34837380)
chr4 (137-178)||(35508536-35508577)
chr4 (137-178)||(38012261-38012302)
chr4 (137-178)||(52909344-52909385)
chr4 (32-84)||(55866333-55866386)
chr4 (199-239)||(9254436-9254476)
chr4 (134-178)||(51692644-51692688)
[»] chr8 (52 HSPs)
chr8 (137-239)||(34213794-34213896)
chr8 (169-239)||(38598994-38599064)
chr8 (169-239)||(1231556-1231626)
chr8 (169-239)||(25288076-25288146)
chr8 (192-239)||(7393168-7393215)
chr8 (188-239)||(34665800-34665851)
chr8 (188-239)||(34666559-34666610)
chr8 (169-239)||(1232799-1232867)
chr8 (111-178)||(16388796-16388863)
chr8 (188-239)||(33497635-33497686)
chr8 (129-239)||(34214488-34214599)
chr8 (133-178)||(23698536-23698581)
chr8 (113-178)||(36928567-36928632)
chr8 (112-183)||(2693787-2693859)
chr8 (111-179)||(30711987-30712055)
chr8 (111-179)||(30719764-30719832)
chr8 (127-178)||(4405946-4405997)
chr8 (192-227)||(7392250-7392285)
chr8 (132-179)||(12199210-12199257)
chr8 (132-179)||(12443638-12443685)
chr8 (127-178)||(13186151-13186202)
chr8 (188-239)||(33497046-33497097)
chr8 (111-178)||(35756673-35756740)
chr8 (127-177)||(31608799-31608849)
chr8 (132-178)||(38862709-38862755)
chr8 (137-178)||(1425318-1425359)
chr8 (137-178)||(3041721-3041762)
chr8 (198-239)||(4463455-4463496)
chr8 (188-233)||(4970161-4970206)
chr8 (137-178)||(23663810-23663851)
chr8 (192-233)||(24377217-24377258)
chr8 (188-233)||(24379015-24379060)
chr8 (113-178)||(36186339-36186404)
chr8 (137-178)||(36325325-36325366)
chr8 (137-178)||(38845564-38845605)
chr8 (137-178)||(39071767-39071808)
chr8 (137-178)||(40775915-40775956)
chr8 (137-178)||(44407122-44407163)
chr8 (111-179)||(20385658-20385726)
chr8 (111-179)||(20386700-20386768)
chr8 (111-179)||(30710945-30711013)
chr8 (122-177)||(22890275-22890330)
chr8 (196-239)||(36574847-36574890)
chr8 (137-178)||(2266583-2266624)
chr8 (137-178)||(8316884-8316925)
chr8 (137-178)||(12273149-12273190)
chr8 (186-239)||(20096325-20096378)
chr8 (137-178)||(22915654-22915695)
chr8 (122-183)||(24085860-24085921)
chr8 (137-178)||(35449874-35449915)
chr8 (191-239)||(9632358-9632406)
chr8 (111-183)||(31873169-31873241)
[»] scaffold0009 (2 HSPs)
scaffold0009 (167-239)||(262439-262511)
scaffold0009 (169-239)||(261031-261101)
[»] scaffold1493 (1 HSPs)
scaffold1493 (169-239)||(623-693)
[»] scaffold0182 (2 HSPs)
scaffold0182 (192-239)||(14400-14447)
scaffold0182 (188-239)||(13164-13215)
[»] scaffold0018 (1 HSPs)
scaffold0018 (188-236)||(73142-73190)
[»] scaffold0008 (1 HSPs)
scaffold0008 (111-178)||(239821-239888)
[»] scaffold0005 (1 HSPs)
scaffold0005 (111-178)||(37833-37900)
[»] scaffold0031 (1 HSPs)
scaffold0031 (114-178)||(69056-69120)
[»] scaffold0220 (1 HSPs)
scaffold0220 (99-178)||(23322-23401)
[»] scaffold0020 (1 HSPs)
scaffold0020 (137-179)||(139762-139804)
[»] scaffold0559 (1 HSPs)
scaffold0559 (137-178)||(1324-1365)
[»] scaffold0027 (1 HSPs)
scaffold0027 (111-183)||(14060-14132)
[»] scaffold0024 (1 HSPs)
scaffold0024 (137-178)||(141859-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (137-178)||(1860-1901)
[»] scaffold0295 (1 HSPs)
scaffold0295 (137-178)||(2234-2275)
[»] scaffold0205 (1 HSPs)
scaffold0205 (137-178)||(21234-21275)
[»] scaffold0206 (1 HSPs)
scaffold0206 (169-233)||(10361-10425)
[»] scaffold0201 (1 HSPs)
scaffold0201 (169-233)||(14177-14241)


Alignment Details
Target: scaffold0347 (Bit Score: 183; Significance: 4e-99; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 14441 - 14663
Alignment:
Q  18 cagagaagtgaagt-agtgaaggagggaagattttgagaagatgaacacagaggtataatggtcttttcgcaactcatttaaccaataaacagagccacg 116  Q
    |||||||||||||| |  |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14441 cagagaagtgaagtgaaggaaggagggaagattttgagaagatggacacaggggtataatggtcttttcgcaactcatttaaccaataaacagagccacg 14540  T
Q  117 tcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcag 216  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  14541 tcagctaatcagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatgggaggattagtaagctcag 14640  T
Q  217 ggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||    
T  14641 ggatgaaaaatcaaatggcctat 14663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 13740 - 13639
Alignment:
Q  138 agtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcct 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  13740 agtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcct 13641  T
Q  238 at 239  Q
    ||    
T  13640 at 13639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 7e-61; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 25065858 - 25066024
Alignment:
Q  69 ggtataatggtcttttcgcaactcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatctt 168  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  25065858 ggtataatggttttttcgcaactcatttaacaaataaatagagccacgtcagctaatcagtgaggtggcagtgattaagtggagagagggacgaaatctt 25065957  T
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggc 235  Q
    |||||||||||||||| | ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  25065958 aaatgattaatttttacaggggtaaaatggaaggattagtaagctcagggatgaaaaatcaaatggc 25066024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 25065075 - 25064970
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaa 226  Q
    ||||| ||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| ||||||||||||||    
T  25065075 agtgacgtggcagtgatcaagtgaggagagggacgaaatcttaaatgattaatttttatagggacagaatgggaggattagtaagatcagggatgaaaaa 25064976  T
Q  227 tcaaat 232  Q
    ||||||    
T  25064975 tcaaat 25064970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 13295267 - 13295165
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| ||||| || |||||||||||||||||| | ||||||||||| |||||||||||| |||||| |||||||||||||| ||    
T  13295267 cagtgattaaccgggaagagggacgacattttaaatgattaatttttacaagggcaaaatggaaggattagtaagctcaggggtgaaaaatcaaatgacc 13295168  T
Q  237 tat 239  Q
    |||    
T  13295167 tat 13295165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 34850335 - 34850407
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||| ||||    
T  34850335 gccacgtcagctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaatttt 34850407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 46282753 - 46282863
Alignment:
Q  129 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 228  Q
    ||||||| |||||||||   ||| |||| |||||| | | ||||||||| |  ||| | ||||||||||| |||||||||||||||||||||||||||||    
T  46282753 tgatgtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatc 46282852  T
Q  229 aaatggcctat 239  Q
    ||| |||||||    
T  46282853 aaacggcctat 46282863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 49093141 - 49093071
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||| |  ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  49093141 aaatgattagtaattacatgggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 49093071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 25065797 - 25065846
Alignment:
Q  32 agtgaaggagggaagattttgagaagatgaacacagaggtataatggtct 81  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25065797 agtgaaggagggaagattttgagaagatgaacacaggggtataatggtct 25065846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 32619465 - 32619417
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32619465 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 32619417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 32622375 - 32622423
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32622375 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 32622423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 37578462 - 37578530
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  37578462 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaat 37578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 24009811 - 24009878
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  24009811 gccacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24009878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 50062968 - 50063018
Alignment:
Q  189 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  50062968 ggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 50063018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 14879129 - 14879062
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  14879129 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 14879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 32917402 - 32917351
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  32917402 agtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 46282152 - 46282109
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  46282152 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 46282109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 49093832 - 49093875
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  49093832 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 49093875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 32238779 - 32238729
Alignment:
Q  189 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  32238779 ggcaaaatgggaggattagtaagttcagggatgaaatttcaaatagcctat 32238729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 1841591 - 1841550
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  1841591 cagtgattaagtggggagagtgacgaaattttaaatgattaa 1841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 6367718 - 6367653
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  6367718 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 51935218 - 51935263
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  51935218 gggcaaaatgggaggattagaaagctcagggatgaaaaatcaaatg 51935263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 1103596 - 1103552
Alignment:
Q  134 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  1103596 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 1103552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 2829539 - 2829602
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 232  Q
    ||||||||||| |||  | ||| |||||||||||||||||||| ||| ||||||||||||||||    
T  2829539 aaatgattaatatttgcaggggtaaaatgggaggattagtaagctcaaggatgaaaaatcaaat 2829602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 4960698 - 4960631
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  4960698 gccacgtcatcaaattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 4960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 6345630 - 6345701
Alignment:
Q  162 aaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    |||| ||||||| ||||| |||  | ||||||||||| |||||||||||||||||||||||||  |||||||    
T  6345630 aaattttaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatg 6345701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 10304060 - 10304009
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  10304060 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaaatttt 10304009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 10304146 - 10304197
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  10304146 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 10304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 34849160 - 34849097
Alignment:
Q  120 gctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||||| |||| ||| ||||||||||| |||||||| |||||||| |||||||||||| ||||    
T  34849160 gctaatcggtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaatttt 34849097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 40210656 - 40210707
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  40210656 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40210707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 46163188 - 46163121
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  ||||||| ||||||||||||||| |||||||| ||||||||||||    
T  46163188 gccacgtcatcaaattagtgacatgacagtaattaagtggggagagagacgaaattttaaatgattaa 46163121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 48691293 - 48691242
Alignment:
Q  124 atcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgat 175  Q
    |||||||| ||| |||||||||||||||||||||||| |||| |||||||||    
T  48691293 atcagtgacgtggcagtgattaagtggggagagtgacaaaattttaaatgat 48691242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 10019657 - 10019727
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||||||||||||| ||||||| |||||    
T  10019657 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatgacctat 10019727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 31514582 - 31514624
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  31514582 cagtgattaagtggggagagggacgaaattttaaatgattaat 31514624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 183487 - 183528
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  183487 cagtgattaagtggggagagggacgaaattttaaatgattaa 183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 4716733 - 4716774
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  4716733 cagtgattaagtggggagagagacgaaattttaaatgattaa 4716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 6344336 - 6344291
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||    
T  6344336 gggcaaaatgggaggattagtaagttcatggatgaaatttcaaatg 6344291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 9443731 - 9443658
Alignment:
Q  111 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||||||||||||||| |||||  ||||| ||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  9443731 gccacgtcagctaatctagtgacttgacaatgattaagtggggggagggaccaaattttaaatgattaaatttt 9443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 13245997 - 13245936
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| |||||||||||||||||||||||| ||| |||| |||| ||||||| ||||    
T  13245997 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaatttt 13245936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 13914339 - 13914404
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||| ||| |||||||| ||||||||||| |||||||| ||||||||||||    
T  13914339 cacgtcatcaaattagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaa 13914404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 24905432 - 24905473
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  24905432 cagtgattaagtggggagagggacgaaattttaaatgattaa 24905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 25648016 - 25647975
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  25648016 cagtgattaagtggggagagggacgaaattttaaatgattaa 25647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 27999121 - 27999206
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaat 196  Q
    ||||| ||||| ||| ||||| ||| ||||||||||||||| |||| |||||||| | |||||||||| |||| ||  ||||||||    
T  27999121 gccacatcagcaaattagtgaggtggcagtgattaagtgggaagagagacgaaatttaaaatgattaaattttgtagtggcaaaat 27999206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 28011495 - 28011454
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28011495 cagtgattaagtggggagagggacgaaattttaaatgattaa 28011454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 33442859 - 33442900
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  33442859 cagtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 36694544 - 36694585
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36694544 cagtgattaagtggggagagagacgaaattttaaatgattaa 36694585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 36710645 - 36710686
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36710645 cagtgattaagtggggagagagacgaaattttaaatgattaa 36710686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 42248605 - 42248564
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42248605 cagtgattaagtggggagagggacgaaattttaaatgattaa 42248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 42267434 - 42267389
Alignment:
Q  138 agtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  42267434 agtgattaagtggggagagagacgaaatattaaatgattaaatttt 42267389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 16970834 - 16970878
Alignment:
Q  140 tgattaagtggggagagtgacgaaatcttaaatgattaattttta 184  Q
    ||||||||||||||||| |||||||| |||||||||||| |||||    
T  16970834 tgattaagtggggagagggacgaaattttaaatgattaaatttta 16970878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 50062282 - 50062246
Alignment:
Q  190 gcaaaatgggaggattagtaagttcagggatgaaaaa 226  Q
    ||||||||| |||||||||||||||||||||||||||    
T  50062282 gcaaaatggaaggattagtaagttcagggatgaaaaa 50062246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 17662136 - 17662187
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  17662136 agtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 17662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 28534820 - 28534867
Alignment:
Q  192 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||| |||||||||||||||||||||||||  ||||||| |||||    
T  28534820 aaaatggaaggattagtaagttcagggatgaaatttcaaatgccctat 28534867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 40772637 - 40772598
Alignment:
Q  139 gtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  40772637 gtgattaagtggggagagggacgaaattttaaatgattaa 40772598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 41098891 - 41098824
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||||||  ||||||||||||||||| | ||| |||| ||||||||||||    
T  41098891 gccacgtcatcaaattagtgatgtggtagtgattaagtggggagggggacaaaattttaaatgattaa 41098824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 43758980 - 43758913
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||||||| ||||| |||||||| ||||||||||||    
T  43758980 gccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 43758913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 44523406 - 44523473
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||| ||||| ||| |||||||||||||  | ||| || ||||| ||||||||||||    
T  44523406 gccacgtcagctaattagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaa 44523473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 5183790 - 5183860
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||||| ||| |||||| |||| |||||||| ||||| |||||||||||||    
T  5183790 aaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctat 5183860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 13295608 - 13295650
Alignment:
Q  197 gggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||| |||||||| |||| ||||||||||||||||||||||    
T  13295608 gggagggttagtaagctcagagatgaaaaatcaaatggcctat 13295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 24701573 - 24701619
Alignment:
Q  189 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggc 235  Q
    |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  24701573 ggcaaaatggaaggattagtaacttcagggacgaaaattcaaatggc 24701619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 19017901 - 19017966
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||||| | ||||||||||||||| |||| ||| |||| ||||||||||||    
T  19017901 cacgtcatcaaattagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaa 19017966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 19515951 - 19515910
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| |||||| |||||    
T  19515951 cagtgattaagtggggagagggacgaaattttaaataattaa 19515910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 21444741 - 21444680
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| ||| |||||||||||||||||||  |||||||| |||| ||||||| ||||    
T  21444741 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 21444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 22103787 - 22103848
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| ||| |||||||||||||| ||||| |||||||| |||| ||||||| ||||    
T  22103787 taattagtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaatttt 22103848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 26024555 - 26024514
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||| | ||||||||||||    
T  26024555 cagtgattaagtggggagagggacgaacttttaaatgattaa 26024514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 30711459 - 30711418
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  30711459 cagtgattaagtggggcgagggacgaaattttaaatgattaa 30711418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 34464745 - 34464786
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  34464745 cagtgattaagtggggagagggacaaaattttaaatgattaa 34464786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 35152475 - 35152434
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  35152475 cagtgattaagtggggagagggacaaaattttaaatgattaa 35152434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 47999388 - 47999429
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||||| || ||||||||||||    
T  47999388 cagtgattaagtggggagagggacgatattttaaatgattaa 47999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 52134200 - 52134159
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  52134200 cagtgattaagtggggagagggacgaaattttaaacgattaa 52134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 2828293 - 2828229
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  |  |||||||| | |||||||||||||| | |||||||||||||||||    
T  2828293 aaatgattaatatttgcagaggcaaaatagaaggattagtaagtttatggatgaaaaatcaaatg 2828229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 35152613 - 35152681
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||| | ||| |||||||||||||||||||||| ||   |  |||||||| |||||||||||||    
T  35152613 gccacgtcatcgaattagtgatgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaat 35152681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 38643692 - 38643580
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaa 226  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||| ||||||||||    
T  38643692 agtgacgtgacagtaattaagtggggagagggacgaaatcttaaatgattaatttttacaggagcaaaatgggaggattagtaaggtcaaggatgaaaaa 38643593  T
Q  227 tcaaatggcctat 239  Q
    |||||||||||||    
T  38643592 tcaaatggcctat 38643580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 38644571 - 38644730
Alignment:
Q  69 ggtataatggtcttttcgcaactcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatctt 168  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||           |||||||||||||||| || ||||||||    
T  38644571 ggtataatggtctttttgcaactcatttaaccattaaacagagtcacgtcagctaatcagt-----------gattaagtggggagagggatgaaatctt 38644659  T
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||| | || |||||||| ||||||| |||| | |||||| |||||||||||| |||||    
T  38644660 aaatgattaatttttacaaggtcaaaatggaaggattaataagcttagggataaaaaatcaaatgacctat 38644730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 111 - 239
Target Start/End: Original strand, 45915750 - 45915878
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaa 210  Q
    ||||||||||||||||||||| ||| ||||||||||  ||  |||| |||| ||| |||||||||||||||||| | ||| ||||| |||||||||||||    
T  45915750 gccacgtcagctaatcagtgacgtggcagtgattaatcggaaagagggacggaattttaaatgattaatttttacaggggtaaaataggaggattagtaa 45915849  T
Q  211 gttcagggatgaaaaatcaaatggcctat 239  Q
    | | |||||||||||||||||||||||||    
T  45915850 gcttagggatgaaaaatcaaatggcctat 45915878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 47558166 - 47558060
Alignment:
Q  133 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 232  Q
    ||||||||||||||  ||| |||| |||||||| ||||||| |||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  47558166 gtgacagtgattaatcgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaaactcagggatgaaaaatcaaat 47558067  T
Q  233 ggcctat 239  Q
     ||||||    
T  47558066 agcctat 47558060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 12644101 - 12644201
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | | | |||||||||||||||||||| ||||||||||||||||||||||||    
T  12644101 cagtgattaaccgggaagagggacgaaattttaaatgattaatttttacaggagtaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 12644200  T
Q  237 t 237  Q
    |    
T  12644201 t 12644201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 4227132 - 4227242
Alignment:
Q  129 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 228  Q
    ||||||| ||||||||||  ||  |||| |||||||| ||||||| |||||||||| | || ||||||||||||||||||||| ||| ||||||||||||    
T  4227132 tgatgtggcagtgattaaccggaaagagggacgaaattttaaatggttaatttttacagggacaaaatgggaggattagtaagctcaaggatgaaaaatc 4227231  T
Q  229 aaatggcctat 239  Q
    |||||||||||    
T  4227232 aaatggcctat 4227242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 12643232 - 12643130
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| ||||||| |||||||||  | ||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  12643232 cagtgattaatcgggaagagggacgaaattttaaatggttaatttttgcaggggtaaaatgggaggattagtaagctcagagatgaaaaatcaaatggcc 12643133  T
Q  237 tat 239  Q
    |||    
T  12643132 tat 12643130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 4226257 - 4226155
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||  |||||||| |||||||||||||||||| | ||||||||||| |||||||||||| ||| || |||| ||||||||||||    
T  4226257 cagtgattaaccgggaagaaggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagctcatggttgaagaatcaaatggcc 4226158  T
Q  237 tat 239  Q
    |||    
T  4226157 tat 4226155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 7158331 - 7158261
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  7158331 aaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatggcctat 7158261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 12929387 - 12929317
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12929387 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatagcctat 12929317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 45914656 - 45914556
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  45914656 cagtgattaatcgggaagagggacgaaattttaaatgattaatttttaca-gggcaaaatgagag-attagtaagcttagggatgaaaaatcaaatggcc 45914559  T
Q  237 tat 239  Q
    |||    
T  45914558 tat 45914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 37284190 - 37284139
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37284190 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctat 37284139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 12930872 - 12930802
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  12930872 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaatgacctat 12930802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 37289329 - 37289380
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  37289329 gggcaaaatgggaggattagtaagctcagggatgaaaaaccaaatggcctat 37289380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 43123451 - 43123398
Alignment:
Q  32 agtgaaggagggaagattttgagaagatgaacacagaggtataatggtcttttc 85  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  43123451 agtgaaggagggaagattttaagaagatgaacacatgggtataatggtcttttc 43123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 2640448 - 2640515
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  2640448 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 2640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 5457177 - 5457244
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||| ||| |||||||||| ||||  ||| |||||||| ||||||||||||    
T  5457177 gccacgtcagctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaa 5457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 22661438 - 22661387
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  22661438 gggcaaaatggaaggattagtaagttcaaggatgaaaaatcaaacggcctat 22661387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 32053429 - 32053480
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  32053429 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 32053480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 27480119 - 27480017
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | ||||||||| |||||||||||||| ||||||||||||||||||  ||||    
T  27480119 cagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaagcggcc 27480020  T
Q  237 tat 239  Q
    |||    
T  27480019 tat 27480017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 23181264 - 23181331
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  23181264 gccacgtcatcaaattagtgacatgacagtgattaagtggagagagggacgaaattttaaatgattaa 23181331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 24388977 - 24388910
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | |||  |||||||| |||||||||||||||||||| |||||||| |||| |||||||    
T  24388977 gccacgtcatcaaattggtgatgtggcagtgattaagtggggagagggacgaaattttaagtgattaa 24388910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 28469278 - 28469345
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| |||||||| ||||||||||||    
T  28469278 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 28469345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 40379927 - 40379860
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| || ||||||||||||||||| |||||||| ||||||||||||    
T  40379927 gccacgtcatcaaattagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaa 40379860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 3914294 - 3914229
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||||||| |||||||||||| || |||| |||||||| ||||||||||||    
T  3914294 cacgtcatcaaattagtgatgtggcagtgattaagttggaagagggacgaaattttaaatgattaa 3914229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 6571149 - 6571104
Alignment:
Q  133 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||    
T  6571149 gtgacagtgattaagtggggagagggacaaaattttaaatgattaa 6571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 17102152 - 17102111
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  17102152 cagtgattaagtggggagagggacgaaattttaaatgattaa 17102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 27396891 - 27396932
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27396891 cagtgattaagtggggagagggacgaaattttaaatgattaa 27396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 27991871 - 27991830
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27991871 cagtgattaagtggggagagggacgaaattttaaatgattaa 27991830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 30948425 - 30948466
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  30948425 cagtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 32680860 - 32680901
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  32680860 cagtgattaagtggggagagggacgaaattttaaatgattaa 32680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 42731551 - 42731510
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42731551 cagtgattaagtggggagagggacgaaattttaaatgattaa 42731510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 45010900 - 45010941
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  45010900 cagtgattaagtggggagagagacgaaattttaaatgattaa 45010941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 22539252 - 22539308
Alignment:
Q  100 caataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagag 156  Q
    |||| ||||| || |||||||||||| ||||| |||| |||||||||||||||||||    
T  22539252 caatcaacagtgctacgtcagctaataagtgacgtgagagtgattaagtggggagag 22539308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 10935952 - 10935885
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||||||| ||||| |||||||| ||||||||||||    
T  10935952 gccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 10935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 11397531 - 11397464
Alignment:
Q  116 gtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||||||||| ||||| |||||||||||||| ||||  ||| ||| |||| |||||||||||| ||||    
T  11397531 gtcagctaattagtgacgtgacagtgattaattgggatgagagactaaattttaaatgattaaatttt 11397464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 27480766 - 27480817
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||| |||||||    
T  27480766 gggcaaaatggaaggattagtaaaatcaaggatgaaaaatcaaacggcctat 27480817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 37563657 - 37563708
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||| ||| ||||||||||| |||||||| ||||| |||||||||||||    
T  37563657 gggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctat 37563708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 43937994 - 43937924
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| ||||||| |||||    
T  43937994 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctat 43937924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 22871573 - 22871614
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  22871573 cagtgattaagtggggagagggaagaaattttaaatgattaa 22871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 32299001 - 32299042
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| || |||||||||    
T  32299001 cagtgattaagtggggagagggacgaaattttcaatgattaa 32299042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 34928915 - 34928956
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  34928915 cagtgattaagtggggagagggacgaaattttaaacgattaa 34928956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 37657010 - 37656949
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaat 172  Q
    ||||||||| | ||| ||||| ||| | |||||||||||||||||| |||||||| ||||||    
T  37657010 gccacgtcatcaaattagtgacgtgccggtgattaagtggggagagggacgaaattttaaat 37656949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 39686799 - 39686840
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  39686799 cagtgattaagtggggagagggacgaaattttaaacgattaa 39686840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 45010730 - 45010689
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  45010730 cagtgattaagtggggagatggacgaaattttaaatgattaa 45010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 12931022 - 12931086
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  ||||||| | ||| ||||||||||| |||||||| ||||| |||||||    
T  12931022 aaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatg 12931086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 13311323 - 13311375
Alignment:
Q  131 atgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||| |||||||||||| ||||||| |||||||| |||||| ||||| ||||    
T  13311323 atgtggcagtgattaagtcgggagagggacgaaattttaaattattaaatttt 13311375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 22870430 - 22870532
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22870430 cagtgattaatcgggaagagagacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 22870529  T
Q  237 tat 239  Q
    |||    
T  22870530 tat 22870532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 22869737 - 22869635
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| ||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22869737 cagtgattaaccgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 22869638  T
Q  237 tat 239  Q
    |||    
T  22869637 tat 22869635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 20857064 - 20856962
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20857064 cagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcc 20856965  T
Q  237 tat 239  Q
    |||    
T  20856964 tat 20856962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 20857515 - 20857617
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| | |||||||||| ||||| | |||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  20857515 cagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagcttaggaatgaaaaatcaaacggcc 20857614  T
Q  237 tat 239  Q
    |||    
T  20857615 tat 20857617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 36476905 - 36476795
Alignment:
Q  129 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 228  Q
    ||||||| |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||||||||||||||||    
T  36476905 tgatgtggcagtgattatctgggaagagggacgaactttcaaatgattagtaattacaagggcaaaatgggaggattagtaagctcagggatgaaaaatc 36476806  T
Q  229 aaatggcctat 239  Q
    ||| |||||||    
T  36476805 aaacggcctat 36476795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 14744730 - 14744794
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  14744730 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 14744794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 31108008 - 31107961
Alignment:
Q  192 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31108008 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 31107961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 20072253 - 20072151
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | ||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  20072253 cagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcc 20072154  T
Q  237 tat 239  Q
    |||    
T  20072153 tat 20072151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 36477356 - 36477446
Alignment:
Q  149 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  36477356 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaacggcctat 36477446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 39402148 - 39402210
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||| |||  | ||||||||||||||||||||||||| ||||||||||||||||||    
T  39402148 aaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaa 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 14848976 - 14849049
Alignment:
Q  111 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  14848976 gccacgtcagctaatctagtgatgtggcagtgattaagtggggtgagggaccaaattttaaatgattaaatttt 14849049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 21978036 - 21978084
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21978036 gggcaaagtgggaggattagtaagctcagggatgaaaaatcaaatggcc 21978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 13963022 - 13962955
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||||||||||||||||| |||||| |||||||| ||||||||||||    
T  13963022 gccacgtcatcaaattagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaa 13962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 16532974 - 16532923
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  16532974 gggcaaaatggaaggattaataagttcagggatgaaaaatcaaacggcctat 16532923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 19892578 - 19892645
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  19892578 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaa 19892645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 20072888 - 20072931
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  20072888 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 20072931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 35512290 - 35512239
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  35512290 agtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 35512239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 38442226 - 38442159
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38442226 gccacgtcatcaaattagttatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38442159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 39181138 - 39181095
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  39181138 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 39181095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 39181815 - 39181858
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  39181815 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 39181858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 29646634 - 29646699
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  29646634 cacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 29646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 32242398 - 32242333
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  32242398 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32242333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 8322539 - 8322495
Alignment:
Q  134 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  8322539 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 8322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 8654185 - 8654137
Alignment:
Q  191 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  8654185 caaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctat 8654137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 35920477 - 35920521
Alignment:
Q  134 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  35920477 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 35920521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 5024304 - 5024355
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| ||||||||||||||||||||  ||||||| ||||||||||||    
T  5024304 agtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaa 5024355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 11047595 - 11047528
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  11047595 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaa 11047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 13362498 - 13362565
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||||||  |||||||||||||||||||| ||| |||| ||||||||||||    
T  13362498 gccacgtcatcaaattagtgatgtagcagtgattaagtggggagagagactaaattttaaatgattaa 13362565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 16533644 - 16533695
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||| |||||||    
T  16533644 gggcaaaatggaaggattaataagttcagagatgaaaaatcaaacggcctat 16533695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 39453458 - 39453391
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  39453458 gccacgtcatcaaattagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaa 39453391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 21978971 - 21979037
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggc 235  Q
    |||| ||||||||||| | ||  ||||| |||||||||||||||||  |||||||||||||||||||    
T  21978971 aaattattaatttttacagggataaaataggaggattagtaagttcgaggatgaaaaatcaaatggc 21979037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 38475290 - 38475336
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38475290 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38475336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 297279 - 297320
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  297279 cagtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 3529138 - 3529179
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  3529138 cagtgattaagtggggagagggacgaaattttaaatgattaa 3529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 5994021 - 5993980
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  5994021 cagtgattaagtggggagagggacgaaattttaaatgattaa 5993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 6758130 - 6758171
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  6758130 cagtgattaagtggggagagggacgaaattttaaatgattaa 6758171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 14194719 - 14194760
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14194719 cagtgattaagtggggagagggacgaaattttaaatgattaa 14194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 28269684 - 28269725
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28269684 cagtgattaagtggggagagggacgaaattttaaatgattaa 28269725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 28771134 - 28771175
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28771134 cagtgattaagtggggagagggacgaaattttaaatgattaa 28771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 31482667 - 31482708
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  31482667 cagtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 41930648 - 41930607
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  41930648 cagtgattaagtggggagagggacgaaattttaaatgattaa 41930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 12904896 - 12904840
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||| |||||| ||||||||||||||||| |||||||| |||||| ||||| ||||    
T  12904896 agtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaatttt 12904840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 31108338 - 31108402
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||| | ||  ||||||| | |||||||||||||| |||||||||||||||||    
T  31108338 aaatgattaatatttacagggataaaatggaaagattagtaagttcatggatgaaaaatcaaatg 31108402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 8673777 - 8673828
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||| ||||| ||||||| ||||||||  |||||||||||||    
T  8673777 gggcaaaatgggagaattagcaagttcaaggatgaaatttcaaatggcctat 8673828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 10684097 - 10684030
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  |||||||||||||||| ||| |||||| |||| ||||||||||||    
T  10684097 gccacgtcatcaaattagtgacatgacagtgattaagtgaggaaagtgacaaaattttaaatgattaa 10684030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 33735382 - 33735343
Alignment:
Q  200 aggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  33735382 aggattagtaatttcagggacgaaaaatcaaatggcctat 33735343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 6150583 - 6150545
Alignment:
Q  140 tgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  6150583 tgattaagtggggagagggacgaaattttaaatgattaa 6150545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 14745548 - 14745478
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| ||||||| |||||    
T  14745548 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctat 14745478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 21260965 - 21260895
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||||||| ||||| ||||||| |||||    
T  21260965 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctat 21260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 21972168 - 21972123
Alignment:
Q  190 gcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||    
T  21972168 gcaaaatgggaggattagtaagctga-ggatgaaaaatcaaatggcc 21972123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 24547412 - 24547462
Alignment:
Q  128 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||| ||| ||||| |||||||||||||| |||||||| ||||||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaa 24547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 37945094 - 37945024
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| ||||||| |||||    
T  37945094 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctat 37945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 1506099 - 1506058
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  1506099 cagtgattaagtggggagagggacgaaattttaaacgattaa 1506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 27587280 - 27587239
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||| ||||||||| |||||||| ||||||||||||    
T  27587280 cagtgattaaatggggagagggacgaaattttaaatgattaa 27587239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 186550 - 186510
Alignment:
Q  138 agtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||| ||| |||||||| ||||||||||||    
T  186550 agtgattaagtggggggagggacgaaattttaaatgattaa 186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 25253186 - 25253122
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||    
T  25253186 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 25253122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 25316976 - 25316912
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||    
T  25316976 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 25316912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 25623420 - 25623318
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25623420 cagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 25623321  T
Q  237 tat 239  Q
    |||    
T  25623320 tat 25623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 25624393 - 25624503
Alignment:
Q  129 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 228  Q
    ||||||| ||||||||||  ||| |||| |||||||| |||||||||||||||||| | ||| |||||||||||||||||||| ||||||||||||||||    
T  25624393 tgatgtggcagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggaaaaatgggaggattagtaagctcagggatgaaaaatc 25624492  T
Q  229 aaatggcctat 239  Q
    ||||| |||||    
T  25624493 aaatgacctat 25624503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 24387451 - 24387381
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24387451 aaatgattaatttttacatggacaaaatgggaggattagtaagctcagggatgaaaaattaaatggcctat 24387381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 20101851 - 20101800
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20101851 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctat 20101800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 29958515 - 29958609
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||  ||| |||| |||||| | | ||||||||| |  ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29958515 cagtgattaaccgggaagagagacgaactttcaaatgattagtaattataggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 29958609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 20103161 - 20103214
Alignment:
Q  186 atgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  20103161 atgggcaaaatgggaggattagtaagctcagggatgaaaaatctaatggcctat 20103214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 24388255 - 24388319
Alignment:
Q  168 taaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 232  Q
    ||||||||||||||||| |  |||||||||| |||||||||||| ||||||||||||||||||||    
T  24388255 taaatgattaatttttacaatggcaaaatggaaggattagtaagctcagggatgaaaaatcaaat 24388319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 20982605 - 20982554
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  20982605 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 20982554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 29957898 - 29957847
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  29957898 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 29957847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 36755249 - 36755184
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  36755249 cacgtcatcaaattagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaa 36755184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 20983280 - 20983323
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  20983280 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 20983323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 19620793 - 19620863
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||||||||| |||||||||||||||||||||||||  ||||||| |||||    
T  19620793 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacctat 19620863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 11721371 - 11721432
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| |||||||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  11721371 taattagtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaatttt 11721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 37895619 - 37895684
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37895619 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37895684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 15848230 - 15848179
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  15848230 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 15848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 17266535 - 17266484
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||| ||||    
T  17266535 tgtgacagtgattaagtggggagagggaccaaattttaaatgattaaatttt 17266484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 25893468 - 25893555
Alignment:
Q  91 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||| || ||| ||||| ||||||||||||||| || || ||| ||||||||||| ||||||||  ||||| | ||||||||||||    
T  25893468 tcatttgactaattaacagcgccacgtcagctaattagggacgtggcagtgattaaggggggagagaaacgaatttttaaatgattaa 25893555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 36382319 - 36382252
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||    
T  36382319 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 36382252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 39423673 - 39423606
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  39423673 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 39423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 43236577 - 43236534
Alignment:
Q  196 tgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  43236577 tgggaggattagtaagttcagggatgaaatttcaaatggcctat 43236534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 10840624 - 10840562
Alignment:
Q  121 ctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||| ||||| ||||||||||||||||||| |||| |||||||  |||||||||||| ||||    
T  10840624 ctaattagtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 10840562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 1696001 - 1696046
Alignment:
Q  133 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||    
T  1696001 gtgacagtgattaagtggggagagggacgaaattttaaacgattaa 1696046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 6658010 - 6657969
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  6658010 cagtgattaagtggggagagggacgaaattttaaatgattaa 6657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 11163319 - 11163360
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  11163319 cagtgattaagtggggagagggacgaaattttaaatgattaa 11163360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 14900748 - 14900789
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14900748 cagtgattaagtggggagagggacgaaattttaaatgattaa 14900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 16099187 - 16099146
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  16099187 cagtgattaagtggggagagggacgaaattttaaatgattaa 16099146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 33739835 - 33739794
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  33739835 cagtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 34447968 - 34447904
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  34447968 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagagacgaaat-ttaaattattaa 34447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 39498442 - 39498401
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  39498442 cagtgattaagtggggagagggacgaaattttaaatgattaa 39498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 44714057 - 44714098
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  44714057 cagtgattaagtggggagagggacgaaattttaaatgattaa 44714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 17266624 - 17266672
Alignment:
Q  135 gacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| |||||||||||||||| ||||||||| |||||||||||| ||||    
T  17266624 gacaatgattaagtggggagaatgacgaaattttaaatgattaaatttt 17266672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 6573719 - 6573656
Alignment:
Q  91 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggag 154  Q
    |||||| |||||| ||||| ||||||||||||||| || || ||| ||||||||||| ||||||    
T  6573719 tcatttgaccaattaacagcgccacgtcagctaattagggacgtggcagtgattaaggggggag 6573656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 10712881 - 10712814
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| || ||||| ||||||||||||    
T  10712881 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaa 10712814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 21103150 - 21103111
Alignment:
Q  200 aggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  21103150 aggattagtaagttcagggatgaaaaaccaaacggcctat 21103111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 43237747 - 43237790
Alignment:
Q  196 tgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||||||||||| |||  |||||||||||||    
T  43237747 tgggaggattagtaagttcagggataaaatttcaaatggcctat 43237790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 10446932 - 10446862
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctat 10446862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 16367247 - 16367317
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||    
T  16367247 aaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctat 16367317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 2318314 - 2318249
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||| ||| || | ||||||||||||||| |||||||| ||||||||||||    
T  2318314 cacgtcatcaaattagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaa 2318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 6573182 - 6573137
Alignment:
Q  133 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||| |||||||| |||||| | ||||||||||||    
T  6573182 gtgacagtgattaaggggggagagggacgaatttttaaatgattaa 6573137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 11349477 - 11349550
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttata 186  Q
    |||||||||||||||  || ||| || ||||||| ||||  ||| |||||||| |||||||||||| |||||||    
T  11349477 cacgtcagctaatcaaagacgtggcactgattaactgggttgagggacgaaattttaaatgattaaattttata 11349550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 11689688 - 11689627
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| ||| |||||||||||||||||||  |||||||| |||| ||||||| ||||    
T  11689688 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 11689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 13995938 - 13995979
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  13995938 cagtgattaagtggggagagggacgaaattttaaacgattaa 13995979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 33062315 - 33062356
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||||||||  |||||||||||    
T  33062315 cagtgattaagtggggagagggacgaaattataaatgattaa 33062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 36479850 - 36479809
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  36479850 cagtgattaagtggggagatggacgaaattttaaatgattaa 36479809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 41248824 - 41248865
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  41248824 cagtgattaagtggggagagggacgaaattttaaacgattaa 41248865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 9694048 - 9694096
Alignment:
Q  191 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||| |||||    
T  9694048 caaaatggaaggattagtaacttcagggacgaaaattcaaatgacctat 9694096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 44044272 - 44044204
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    |||| |||||||||||||||| ||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  44044272 gccatgtcagctaatcagtgacgtggcagtaattaattgggctcagggacgaaattttaaatgattaat 44044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 29192957 - 29193063
Alignment:
Q  133 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 232  Q
    ||||||||||||||  ||| |||| ||| |||| |||||| ||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||    
T  29192957 gtgacagtgattaatcgggaagagggacaaaattttaaataattaatttttacaggggcgaaatgggaggattagtaagctcagggatgaaaaatcaaat 29193056  T
Q  233 ggcctat 239  Q
    |||||||    
T  29193057 ggcctat 29193063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 32717073 - 32717175
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||| ||||| |||| |||| |||||||| |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  32717073 cagtaattaattgggaagagggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagtttagggatgaaaaatcaaatgacc 32717172  T
Q  237 tat 239  Q
    |||    
T  32717173 tat 32717175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 29192167 - 29192065
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||| || |||||||||||| ||||| ||||||||||||||||||    
T  29192167 cagtgattaatcgggaagagggacgaaattttaaatgattaatttttacaggggcaaaacggaaggattagtaagctcaggaatgaaaaatcaaatggcc 29192068  T
Q  237 tat 239  Q
    |||    
T  29192067 tat 29192065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 44476130 - 44476082
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44476130 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 44476082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 22736709 - 22736760
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  22736709 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctat 22736760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 33156264 - 33156331
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||    
T  33156264 gccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaa 33156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 45279303 - 45279354
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  45279303 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 45279354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 48188459 - 48188408
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  48188459 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 48188408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 2944045 - 2943944
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  2944045 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctca-ggatgaaaaatcaaacggcc 2943947  T
Q  237 tat 239  Q
    |||    
T  2943946 tat 2943944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 11026069 - 11025975
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||  ||| |||| |||||| | | ||||||||| |  |||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  11026069 cagtgattaaccgggaagagggacgaactttcaaatgattagtaattatagaggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 11025975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 37249319 - 37249229
Alignment:
Q  149 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||| |||||| | | ||||||||| |  ||| | ||||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  37249319 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattaataagctcagggatgaaaaatcaaacggcctat 37249229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 23458251 - 23458316
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  23458251 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23458316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 44481972 - 44482020
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  44481972 gggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatggcc 44482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 1756631 - 1756580
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  1756631 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctat 1756580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 1757323 - 1757374
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  1757323 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctat 1757374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 2944685 - 2944736
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  2944685 gggcaaaatggatggattagtaagttcagggatgaaaaatcaaacggcctat 2944736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 9294228 - 9294295
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  9294228 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 9294295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 11026651 - 11026702
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  11026651 gggcaaaatggaaggattggtaagttcagggatgaaaaatcaaacggcctat 11026702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 26463884 - 26463935
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  26463884 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 26463935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 33689649 - 33689716
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  33689649 gccacgtcatcgaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33689716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 37249817 - 37249868
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  37249817 gggcagaatgggaggattagtaagctcagggatgaaaaatcaaacggcctat 37249868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 43105314 - 43105263
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  43105314 gggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctat 43105263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 43105853 - 43105904
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  43105853 gggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctat 43105904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 43384441 - 43384374
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  43384441 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 43384374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 45278625 - 45278574
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  45278625 gggcaaaatggaaggattagtaaattcagggatgaaaaatcaaacggcctat 45278574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 48189118 - 48189169
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  48189118 gggcaaaatggaaggattagtaagctcagggatgaaaaatcaaacggcctat 48189169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 19741188 - 19741229
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  19741188 cagtgattaagtggggagagtgacgaaattttaaatgattaa 19741229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 32716365 - 32716284
Alignment:
Q  153 agagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgg 234  Q
    |||| |||||||| ||||||| |||||||||| | ||| |||||| ||||||||||||  ||| |||| |||||||||||||    
T  32716365 agagggacgaaattttaaatggttaatttttacaagggtaaaatgagaggattagtaaactcaaggataaaaaatcaaatgg 32716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 41988104 - 41988048
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  41988104 agtgatgtggcagtgattaagtgaggagagagacgaaattttaaatgattaaatttt 41988048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 40758302 - 40758235
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| |||||||| ||||||||||||    
T  40758302 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 40758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 40033747 - 40033793
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  40033747 tgtgacagtgattaagtggggagagggacaaaattttaaatgattaa 40033793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 51994173 - 51994223
Alignment:
Q  128 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 51994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 2796311 - 2796270
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  2796311 cagtgattaagtggggagagggacgaaattttaaatgattaa 2796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 8041748 - 8041707
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  8041748 cagtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 10770756 - 10770797
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  10770756 cagtgattaagtggggagagggacgaaattttaaatgattaa 10770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 21783666 - 21783621
Alignment:
Q  40 agggaagattttgagaagatgaacacagaggtataatggtcttttc 85  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  21783666 agggaagattttaagaagatgaacacatgggtataatggtcttttc 21783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 36314563 - 36314604
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36314563 cagtgattaagtggggagagggacgaaattttaaatgattaa 36314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 48322642 - 48322683
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  48322642 cagtgattaagtggggagagggacgaaattttaaatgattaa 48322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 54466555 - 54466514
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  54466555 cagtgattaagtggggagagggacgaaattttaaatgattaa 54466514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 40506080 - 40506124
Alignment:
Q  134 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||    
T  40506080 tgacagtgattaagtgcggagagagacgaaattttaaatgattaa 40506124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 25108365 - 25108432
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||| ||| |||||||||| || |  ||  |||||||| ||||||||||||    
T  25108365 gccacgtcagctaatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaa 25108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 44654790 - 44654845
Alignment:
Q  128 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| |||||||||||||| ||||||||| |||||||| |||| ||||||| ||||    
T  44654790 gtgacgtgacagtgattaaatggggagagggacgaaattttaagtgattaaatttt 44654845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 25107370 - 25107304
Alignment:
Q  112 ccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||| ||| ||| |||||||||| || |  ||| |||||||| ||||||||||||    
T  25107370 ccacgtcagctaatcactgacgtggcagtgattaactgtgatgagggacgaaattttaaatgattaa 25107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 20704608 - 20704669
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| ||||| ||||||||||||| |||| |||||||| |||| ||||||| ||||    
T  20704608 taattagtgacgtgactgtgattaagtgggaagagggacgaaattttaagtgattaaatttt 20704669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 22735440 - 22735403
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaa 225  Q
    |||||||||||||||||||||||| | |||||||||||    
T  22735440 gggcaaaatgggaggattagtaagcttagggatgaaaa 22735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 46474947 - 46474906
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  46474947 cagtgattaagtggggagagggacaaaattttaaatgattaa 46474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 39399378 - 39399434
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||| ||| |||||||||| ||||||||| || ||||| |||||||||||| ||||    
T  39399378 agtgacgtggcagtgattaactggggagagagatgaaattttaaatgattaaatttt 39399434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 46670561 - 46670609
Alignment:
Q  191 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||| || |||||||| |||||||||||||| ||||||| |||||    
T  46670561 caaaatggaagaattagtaacttcagggatgaaaattcaaatgacctat 46670609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 54317917 - 54317973
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||| ||| |||||||||| | ||||||| |||||||| |||||||||||| ||||    
T  54317917 agtgacgtggcagtgattaattagggagagagacgaaattttaaatgattaaatttt 54317973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 55036771 - 55036699
Alignment:
Q  167 ttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||| |||  | ||||| | ||| ||||||||||| |||||| ||||||| ||||||| |||||    
T  55036771 ttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctat 55036699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 55052545 - 55052585
Alignment:
Q  138 agtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| ||||||||| |||||||| ||||||||||||    
T  55052545 agtgattaaatggggagagggacgaaattttaaatgattaa 55052585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 4117507 - 4117617
Alignment:
Q  129 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 228  Q
    ||||||| ||||||||||  | | |||| |||||| | | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  4117507 tgatgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatc 4117606  T
Q  229 aaatggcctat 239  Q
    ||| |||||||    
T  4117607 aaacggcctat 4117617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 33401126 - 33401196
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33401126 aaatgattaacttttacaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaacggcctat 33401196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 4116937 - 4116829
Alignment:
Q  131 atgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaa 230  Q
    ||||| ||||||||||  | | |||| |||||| | | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  4116937 atgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaa 4116838  T
Q  231 atggcctat 239  Q
    | |||||||    
T  4116837 acggcctat 4116829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 17784385 - 17784455
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatggcctat 17784455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 14656612 - 14656518
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 231  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| |||||||||||||||||||    
T  14656612 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaa 14656518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 8427384 - 8427435
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  8427384 gggcaaaatgggaggattagtaagtccagggatgaaaaatcaaatgacctat 8427435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 33400047 - 33399996
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  33400047 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 33399996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 1661453 - 1661500
Alignment:
Q  192 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  1661453 aaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 1661500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 14657228 - 14657279
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||| |||||||| |||||||||| |||||||    
T  14657228 gggcaaaatggaaggattagtaaggtcagggataaaaaatcaaacggcctat 14657279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 21627983 - 21628050
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| ||| |||| ||||||||||||    
T  21627983 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaa 21628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 30804019 - 30803952
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  30804019 gccacgtcatcaaattagtgagatggcagtgattaagtggggagagggacgaaattttaaatgattaa 30803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 33517692 - 33517625
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||  |||||||||||||||||||| |||||||| ||||||||||||    
T  33517692 gccacgtcatcaaattagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaa 33517625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 33647121 - 33647054
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  33647121 gccacgtcatcaaattagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaa 33647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 23291844 - 23291774
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| |||||||||||||    
T  23291844 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctat 23291774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 12080768 - 12080727
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  12080768 cagtgattaagtggggagagggacgaaattttaaatgattaa 12080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 28000650 - 28000691
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28000650 cagtgattaagtggggagagggacgaaattttaaatgattaa 28000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 30337581 - 30337540
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  30337581 cagtgattaagtggggagagggacgaaattttaaatgattaa 30337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 680024 - 679956
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   |  |||||||| |||||||||||||    
T  680024 gccacgtcagctaatcagtgatgtggcagtaattaactgggctcatggacgaaattttaaatgattaat 679956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 5064435 - 5064371
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  | ||||||| ||||||||||||||| |||||||| ||||| |||||||    
T  5064435 aaatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatg 5064371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 30725917 - 30725850
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||| ||||||||| |||||||| ||||||||||||    
T  30725917 gccacgtcatcaaattagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaa 30725850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 13480308 - 13480238
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||    
T  13480308 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctat 13480238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 13480492 - 13480562
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| ||| || ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||    
T  13480492 aaatgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctat 13480562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 363095 - 363136
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  363095 cagtgattaagtggggagagggacgaaattttaaacgattaa 363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 1215147 - 1215208
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| ||| ||||||||||||||||| || |||||||| |||| ||||||| ||||    
T  1215147 taattagtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaatttt 1215208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 3059389 - 3059348
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  3059389 cagtgattaagtgaggagagggacgaaattttaaatgattaa 3059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 14196880 - 14196921
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| | |||||| ||||||||||||    
T  14196880 cagtgattaagtggggagaggggcgaaattttaaatgattaa 14196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 17734459 - 17734500
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  17734459 cagtgattaagtggggagagggacaaaattttaaatgattaa 17734500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 680998 - 681066
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||   |  |||||||| |||||||||||||    
T  680998 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcatggacgaaattttaaatgattaat 681066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 20994975 - 20995039
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| |||||||    
T  20994975 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatg 20995039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 26463326 - 26463270
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||| ||| |||||||||| ||||  ||| |||||||| ||||||||||||    
T  26463326 taatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaa 26463270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 28498298 - 28498362
Alignment:
Q  114 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||| ||| |||||||||| ||||   || ||| |||| ||||||||||||    
T  28498298 acgtcagctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaa 28498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 29810709 - 29810773
Alignment:
Q  114 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||| ||| |||||||||| ||||   || ||| |||| ||||||||||||    
T  29810709 acgtcagctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaa 29810773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 23455657 - 23455759
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||||| | |||||||||||||||| |  ||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  23455657 cagtgattaatcgggaagagggacgaaatttgaaatgattaatttttacagtggcaaaatgggaggattagtaagctcaggaatgaaaaatcaaatgacc 23455756  T
Q  237 tat 239  Q
    |||    
T  23455757 tat 23455759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 23455070 - 23454984
Alignment:
Q  153 agagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||| |||| ||| |||||||  ||||||||| | ||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  23455070 agagggacggaattttaaatgggtaatttttacaggggcaaaatgggatgattagtaagctcagggatgaaaaatcaaatggcctat 23454984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 48528628 - 48528558
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  48528628 cacgtcagctaatcagtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaatttt 48528558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 38982576 - 38982666
Alignment:
Q  149 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  38982576 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctat 38982666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 53477080 - 53477150
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  53477080 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatgacctat 53477150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 16605760 - 16605692
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| ||| |||||||| |||||||||||||    
T  16605760 gccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaat 16605692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 35028268 - 35028335
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  35028268 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 35028335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 38813635 - 38813584
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  38813635 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 38813584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 38814346 - 38814396
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggccta 238  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  38814346 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggccta 38814396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 54591597 - 54591642
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  54591597 gggcaaaatgggaggtttagtaagttcagggatgaaaaatcaaatg 54591642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 14801894 - 14801827
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  14801894 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 14801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 52816442 - 52816493
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  52816442 gggcaaaatggaaggattagtaagttcagagatgaaaaatcaaacggcctat 52816493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 56556663 - 56556612
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  56556663 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctat 56556612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 56557344 - 56557395
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  56557344 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctat 56557395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 54435347 - 54435433
Alignment:
Q  91 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 177  Q
    |||||| |||||| ||||| || |||||||||||| |||||||||  |||||||||| ||| |||| |||||||| |||||| ||||    
T  54435347 tcatttgaccaattaacagtgcgacgtcagctaattagtgatgtgttagtgattaagggggaagagggacgaaattttaaataatta 54435433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 37976449 - 37976490
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  37976449 cagtgattaagtggggagagtgacgaaattttaaatgattaa 37976490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 50418929 - 50418974
Alignment:
Q  133 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  50418929 gtgacagtgattaagtggggagagggacgaaattttaaatgattaa 50418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 17356208 - 17356256
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgat 175  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  17356208 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgat 17356256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 52298168 - 52298112
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||| ||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  52298168 agtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 52298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 15507943 - 15508010
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| | | |||||||||||||||||||| |||||||| ||||||||||||    
T  15507943 gccacgtcatcaaattagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaa 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 34765666 - 34765717
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  34765666 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 34765717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 48529855 - 48529918
Alignment:
Q  120 gctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||||||||||| ||| |||||||||||||| ||||| ||| |||| |||||||||||| ||||    
T  48529855 gctaatcagtgacgtggcagtgattaagtggagagagggacaaaattttaaatgattaaatttt 48529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 52815744 - 52815693
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| |||||||    
T  52815744 gggcaaaatgaaaggattagtaagttcagggataaaaaatcaaacggcctat 52815693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 4982991 - 4983033
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  4982991 cagtgattaagtggggagagggacgaaattttaaatgattaat 4983033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 16005975 - 16005929
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  16005975 tgtgacagtgattaagtagggagagggacgaaattttaaatgattaa 16005929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 44967329 - 44967375
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  44967329 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44967375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 53129778 - 53129836
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaa 171  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| |||||    
T  53129778 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaa 53129836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 53701969 - 53701903
Alignment:
Q  112 ccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||| | ||| ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||    
T  53701969 ccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaa 53701903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 54590243 - 54590173
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| ||| ||  |||||||||| || |||||||||||||  |||||||||||||||| |||||    
T  54590243 aaatgattaatatttgtagaggcaaaatggaagaattagtaagttcaaagatgaaaaatcaaatgacctat 54590173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 9145031 - 9145072
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  9145031 cagtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 13058169 - 13058128
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  13058169 cagtgattaagtggggagagggacgaaattttaaatgattaa 13058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 13336863 - 13336908
Alignment:
Q  194 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||    
T  13336863 aatgggaggattagtaagttcagggatgaaatttcaaatgacctat 13336908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 18831481 - 18831440
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  18831481 cagtgattaagtggggagagagacgaaattttaaatgattaa 18831440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 23613441 - 23613400
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  23613441 cagtgattaagtggggagagggacgaaattttaaatgattaa 23613400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 27934664 - 27934623
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27934664 cagtgattaagtggggagagggacgaaattttaaatgattaa 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 32950274 - 32950233
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  32950274 cagtgattaagtggggagagagacgaaattttaaatgattaa 32950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 36009109 - 36009150
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36009109 cagtgattaagtggggagagggacgaaattttaaatgattaa 36009150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 37248368 - 37248327
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  37248368 cagtgattaagtggggagagcgacgaaattttaaatgattaa 37248327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 42738296 - 42738337
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42738296 cagtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 43155792 - 43155833
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  43155792 cagtgattaagtggggagagggacgaaattttaaatgattaa 43155833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 49879472 - 49879513
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  49879472 cagtgattaagtggggagagggacgaaattttaaatgattaa 49879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 10781770 - 10781822
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||| ||||||||| |||| ||||||||| |||||||| |||||||||||||    
T  10781770 agtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaat 10781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 24349816 - 24349764
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||| ||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  24349816 agtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaat 24349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 24711242 - 24711202
Alignment:
Q  138 agtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  24711242 agtgattaagtggggagagggacgaaattttaaatgattaa 24711202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 54086992 - 54087032
Alignment:
Q  138 agtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  54086992 agtgattaagtggggagagagacgaaattttaaatgattaa 54087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 55013108 - 55013158
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||| ||||||    
T  55013108 gggcaaactgggaggattagtaagctca-ggatgaaaaatcaaatagcctat 55013158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 12691506 - 12691436
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| ||| || || || | ||| ||||||||||| |||||||| ||||| |||||||||||||    
T  12691506 aaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctat 12691436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 5369079 - 5369038
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  5369079 cagtgattaagtggggagagggacaaaattttaaatgattaa 5369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 9400784 - 9400825
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  9400784 cagtgattaagtggggagagggatgaaattttaaatgattaa 9400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 22566931 - 22566890
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  22566931 cagtgattaagtggggagagggatgaaattttaaatgattaa 22566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 22882352 - 22882397
Alignment:
Q  194 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||| |||||||||||||||||  ||||||| |||||    
T  22882352 aatgggaggattattaagttcagggatgaaatttcaaatgacctat 22882397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 22934016 - 22934061
Alignment:
Q  194 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||| |||||||||||||||||  ||||||| |||||    
T  22934016 aatgggaggattattaagttcagggatgaaatttcaaatgacctat 22934061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 33247538 - 33247579
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  33247538 cagtgattaagtggggagagggatgaaattttaaatgattaa 33247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 34837339 - 34837380
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  34837339 cagtgattaagtggggagagggacgaaattttaaacgattaa 34837380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 35508536 - 35508577
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||  ||||||| ||||||||||||    
T  35508536 cagtgattaagtggggagagatacgaaattttaaatgattaa 35508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 38012302 - 38012261
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  38012302 cagtgattaagtggggagagagacgaaattttaaacgattaa 38012261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 52909385 - 52909344
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  52909385 cagtgattaagtggggagatggacgaaattttaaatgattaa 52909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 55866386 - 55866333
Alignment:
Q  32 agtgaaggagggaagattttgagaaga-tgaacacagaggtataatggtctttt 84  Q
    |||||||||||||||||||| |||||| ||||||||  ||||| ||||||||||    
T  55866386 agtgaaggagggaagattttaagaagattgaacacatgggtatgatggtctttt 55866333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 9254476 - 9254436
Alignment:
Q  199 gaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||| ||||||||  |||||||||||||    
T  9254476 gaggattagtaagttcaaggatgaaatttcaaatggcctat 9254436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 51692688 - 51692644
Alignment:
Q  134 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||| |||||||||||| |||||||| |||| |||||||    
T  51692688 tgacagtgatcaagtggggagagggacgaaattttaagtgattaa 51692644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 34213896 - 34213794
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  34213896 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacggcc 34213797  T
Q  237 tat 239  Q
    |||    
T  34213796 tat 34213794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 38599064 - 38598994
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38599064 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatggcctat 38598994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 1231626 - 1231556
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||| | ||| |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  1231626 aaatgattaatttttacaggggtaaaatgggaggattagtaagctcatggatgaaaaatcaaagggcctat 1231556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 25288076 - 25288146
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | |||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  25288076 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctat 25288146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 7393168 - 7393215
Alignment:
Q  192 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  7393168 aaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctat 7393215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 34665851 - 34665800
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  34665851 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 34665800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 34666559 - 34666610
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  34666559 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctat 34666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 1232799 - 1232867
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||| | |||||||||||||||||    ||| |||||||||||||||||||||||||||    
T  1232799 aaatgattaatttttacaggggcaaaatgggaggat--acaagctcagggatgaaaaatcaaatggcctat 1232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 16388796 - 16388863
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  16388796 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 16388863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 33497635 - 33497686
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  33497635 gggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatgccctat 33497686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 34214488 - 34214599
Alignment:
Q  129 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcaggga-tgaaaaat 227  Q
    ||||||| |||||||||   ||| |||| |||||| | | ||||||||| |  ||| | ||||||||||| |||||||||||||||||||| ||||||||    
T  34214488 tgatgtggcagtgattattcgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggattgaaaaat 34214587  T
Q  228 caaatggcctat 239  Q
    |||| |||||||    
T  34214588 caaacggcctat 34214599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 23698536 - 23698581
Alignment:
Q  133 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  23698536 gtgacagtgattaagtggggagagggacgaaattttaaatgattaa 23698581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 36928632 - 36928567
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  36928632 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36928567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 2693787 - 2693859
Alignment:
Q  112 ccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||||||| |||||| ||||| |||||||||||||||||||| |||| || |||| |||||||||||| ||||    
T  2693787 ccacgtcatctaatctagtgacgtgacagtgattaagtggggggagtaaccaaattttaaatgattaaatttt 2693859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 30711987 - 30712055
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  30711987 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 30719764 - 30719832
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  30719764 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30719832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 4405946 - 4405997
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  4405946 agtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaa 4405997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 7392285 - 7392250
Alignment:
Q  192 aaaatgggaggattagtaagttcagggatgaaaaat 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  7392285 aaaatgggaggattagtaagttcagggatgaaaaat 7392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 12199210 - 12199257
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  12199210 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12199257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 12443638 - 12443685
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  12443638 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12443685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 13186202 - 13186151
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  13186202 agtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 13186151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 33497097 - 33497046
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||| |||||    
T  33497097 gggcaaaatggaaggattagtaagttcaagaatgaaaaatcaaatgacctat 33497046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 35756740 - 35756673
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  35756740 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 35756673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 31608799 - 31608849
Alignment:
Q  127 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 177  Q
    ||||| ||| |||||||||||||||||||| |||||||| |||||||||||    
T  31608799 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgatta 31608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 38862755 - 38862709
Alignment:
Q  132 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38862755 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38862709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 1425318 - 1425359
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1425318 cagtgattaagtggggagagggacgaaattttaaatgattaa 1425359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 3041721 - 3041762
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  3041721 cagtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 4463455 - 4463496
Alignment:
Q  198 ggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  4463455 ggaggattagtaagttcagggatgaaatttcaaatggcctat 4463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 4970206 - 4970161
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||    
T  4970206 gggcaaaatggaaggattagtaagttcagggatgaaatttcaaatg 4970161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 23663810 - 23663851
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  23663810 cagtgattaagtggggagagggacgaaattttaaatgattaa 23663851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 24377258 - 24377217
Alignment:
Q  192 aaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  24377258 aaaatgggaggattagtaagttcagggatgaaacttcaaatg 24377217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 24379015 - 24379060
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||    
T  24379015 gggcaaaataggaggattagtaagttcaaggatgaaatatcaaatg 24379060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 36186339 - 36186404
Alignment:
Q  113 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||| | ||| ||| ||||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  36186339 cacgtcatcaaattagtaatgtggcagtgattaagtagggagagggacgaaattttaaatgattaa 36186404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 36325366 - 36325325
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36325366 cagtgattaagtggggagagggacgaaattttaaatgattaa 36325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 38845564 - 38845605
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  38845564 cagtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 39071808 - 39071767
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  39071808 cagtgattaagtggggagagggacgaaattttaaatgattaa 39071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 40775915 - 40775956
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  40775915 cagtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 44407122 - 44407163
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  44407122 cagtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 20385726 - 20385658
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  20385726 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcagggacgaaattttaaatgattaat 20385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 20386700 - 20386768
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||||||||||||||||||| ||||  |||| ||||   || |||||||| |||||||||||||    
T  20386700 gccacgtcagctaatcagtgatgtggcagtagttaactgggctcagggacgaaattttaaatgattaat 20386768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 30711013 - 30710945
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    ||||||||| ||||||||||| |||||||| ||||| ||||   || |||||||| |||||||||||||    
T  30711013 gccacgtcaactaatcagtgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaat 30710945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 22890275 - 22890330
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 177  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| |||| ||||||    
T  22890275 taattagtgatgtgacagtgattaagtgggaagagggacaaaattttaagtgatta 22890330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 36574890 - 36574847
Alignment:
Q  196 tgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||||||||||||  ||||||| |||||    
T  36574890 tgggaggattagtaagttcagggatgaaatttcaaatgccctat 36574847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 2266624 - 2266583
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  2266624 cagtgattaagtggggagagggacgaaattttaaacgattaa 2266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 8316884 - 8316925
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  8316884 cagtgattaagtggggagatggacgaaattttaaatgattaa 8316925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 12273149 - 12273190
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||| |||| |||||||| ||||||||||||    
T  12273149 cagtgattaagtgggaagagggacgaaattttaaatgattaa 12273190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 20096325 - 20096378
Alignment:
Q  186 atgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||    
T  20096325 atgggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctat 20096378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 22915654 - 22915695
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
T  22915654 cagtgattaagtggggagagggacggaattttaaatgattaa 22915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 24085921 - 24085860
Alignment:
Q  122 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||| ||||| |||||||||||||||||||||||| ||| |||| ||||  |||||| ||||    
T  24085921 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagcgattaaatttt 24085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 35449874 - 35449915
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||| ||||||||| |||||||| ||||||||||||    
T  35449874 cagtgattaaatggggagagggacgaaattttaaatgattaa 35449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 9632406 - 9632358
Alignment:
Q  191 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||| |||||    
T  9632406 caaaatggaaggattagtaacttcagggacgaaaattcaaatgacctat 9632358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 31873169 - 31873241
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    ||||||||| | ||| ||||||||  ||||||||||||||| ||||  || |||| |||||||||||| ||||    
T  31873169 gccacgtcatcaaattagtgatgtagcagtgattaagtgggaagaggaacaaaattttaaatgattaaatttt 31873241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 262439 - 262511
Alignment:
Q  167 ttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||| |||  | ||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  262439 ttaaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctat 262511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 261101 - 261031
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | ||||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  261101 aaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatgacctat 261031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 693 - 623
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||| |||  | |||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  693 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctat 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 14400 - 14447
Alignment:
Q  192 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  14400 aaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctat 14447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 13215 - 13164
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctat 239  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||| ||||    
T  13215 gggcaaaatgggaggattactaaactcagagatgaaaaatcaaatggtctat 13164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 73190 - 73142
Alignment:
Q  188 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 236  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  73190 gggcaaaatgggaggattagtaagctcagggatgaaaagtcaaatggcc 73142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 239821 - 239888
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||||||||||||||||||| |||| ||||||||||   || |||||||| ||||||||||||    
T  239821 gccacgtcagctaatcagtgatgtggcagtaattaagtgggtgtagggacgaaattttaaatgattaa 239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 37833 - 37900
Alignment:
Q  111 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37833 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 69120 - 69056
Alignment:
Q  114 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  69120 acgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 69056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 23401 - 23322
Alignment:
Q  99 ccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    ||||| ||||||||||||||||| ||| | ||| ||| |||||||||||||||| |||  || |||| ||||||||||||    
T  23401 ccaattaacagagccacgtcagcaaattactgacgtggcagtgattaagtggggggagaaaccaaattttaaatgattaa 23322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 139804 - 139762
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 179  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  139804 cagtgattaagtggggagagggacgaaattttaaatgattaat 139762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 1365 - 1324
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1365 cagtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 14060 - 14132
Alignment:
Q  111 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 183  Q
    |||||||||||||||| ||||| |||||| ||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  14060 gccacgtcagctaatctagtgacgtgacaatgattaagtgggg-gagggaccaaattttaaatgattaaatttt 14132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 141859 - 141900
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  141859 cagtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 1901 - 1860
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1901 cagtgattaagtggggagagggacgaaattttaaatgattaa 1860  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 2275 - 2234
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  2275 cagtgattaagtggggagagggacaaaattttaaatgattaa 2234  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 21234 - 21275
Alignment:
Q  137 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 178  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
T  21234 cagtgattaagtggggagagggacggaattttaaatgattaa 21275  T

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Target: scaffold0206 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 10425 - 10361
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||    
T  10425 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 10361  T

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Target: scaffold0201 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 14177 - 14241
Alignment:
Q  169 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 233  Q
    ||||||||||| ||| || ||||| | ||| ||||||||||| ||||| |||||||| |||||||    
T  14177 aaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaatg 14241  T

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