View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1450_low_32 (Length: 204)

Name: NF1450_low_32
Description: NF1450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1450_low_32
NF1450_low_32
[»] chr7 (31 HSPs)
chr7 (1-204)||(23313265-23313468)
chr7 (1-200)||(23108029-23108229)
chr7 (1-142)||(22083204-22083345)
chr7 (98-204)||(3862007-3862114)
chr7 (43-134)||(16547229-16547321)
chr7 (43-134)||(16618341-16618433)
chr7 (43-134)||(17152181-17152273)
chr7 (23-78)||(26808520-26808575)
chr7 (1-78)||(1636702-1636779)
chr7 (1-78)||(5189465-5189542)
chr7 (1-71)||(24423216-24423286)
chr7 (1-78)||(44672797-44672874)
chr7 (20-78)||(20436933-20436992)
chr7 (20-78)||(1633475-1633534)
chr7 (118-200)||(33313036-33313118)
chr7 (23-65)||(5241959-5242001)
chr7 (7-71)||(22952824-22952888)
chr7 (1-65)||(17731104-17731164)
chr7 (1-39)||(1960306-1960344)
chr7 (1-56)||(10345469-10345520)
chr7 (1-65)||(11397830-11397891)
chr7 (118-184)||(23759730-23759795)
chr7 (1-74)||(48645742-48645811)
chr7 (118-204)||(11279529-11279614)
chr7 (1-65)||(35961384-35961444)
chr7 (1-38)||(4595779-4595816)
chr7 (1-38)||(26557806-26557843)
chr7 (1-38)||(33844390-33844427)
chr7 (69-117)||(6214132-6214180)
chr7 (23-55)||(26075463-26075495)
chr7 (23-55)||(26099250-26099282)
[»] chr1 (23 HSPs)
chr1 (1-204)||(34066382-34066584)
chr1 (1-197)||(8435280-8435476)
chr1 (1-187)||(23990140-23990325)
chr1 (1-174)||(22456498-22456671)
chr1 (1-145)||(49147993-49148138)
chr1 (1-112)||(22447954-22448065)
chr1 (1-112)||(22453188-22453299)
chr1 (1-115)||(17618867-17618981)
chr1 (41-204)||(16190222-16190385)
chr1 (5-111)||(3087513-3087619)
chr1 (101-204)||(1936664-1936770)
chr1 (1-78)||(25662860-25662937)
chr1 (1-78)||(28138613-28138690)
chr1 (1-78)||(28141863-28141940)
chr1 (20-78)||(14159085-14159144)
chr1 (1-78)||(21911049-21911126)
chr1 (1-65)||(2405808-2405868)
chr1 (1-47)||(34732111-34732157)
chr1 (1-38)||(49852903-49852940)
chr1 (98-204)||(39546280-39546387)
chr1 (1-37)||(45941738-45941774)
chr1 (1-38)||(21110923-21110960)
chr1 (98-165)||(21153331-21153399)
[»] chr6 (36 HSPs)
chr6 (14-204)||(16883713-16883903)
chr6 (1-197)||(11183841-11184037)
chr6 (1-204)||(20527166-20527371)
chr6 (1-142)||(28118049-28118190)
chr6 (1-174)||(12983385-12983558)
chr6 (5-142)||(9313551-9313687)
chr6 (1-200)||(12980498-12980696)
chr6 (1-134)||(15578676-15578810)
chr6 (1-78)||(16731609-16731686)
chr6 (1-110)||(2773166-2773275)
chr6 (43-134)||(12747035-12747127)
chr6 (1-111)||(20189191-20189301)
chr6 (1-111)||(22146690-22146800)
chr6 (43-133)||(28894281-28894372)
chr6 (98-204)||(19664767-19664873)
chr6 (101-199)||(32427344-32427441)
chr6 (1-65)||(28111578-28111640)
chr6 (1-78)||(965027-965104)
chr6 (1-65)||(6514283-6514345)
chr6 (1-57)||(13005488-13005542)
chr6 (1-65)||(14281291-14281353)
chr6 (98-199)||(15540613-15540713)
chr6 (5-61)||(28107530-28107584)
chr6 (1-63)||(5260099-5260159)
chr6 (98-193)||(15535105-15535199)
chr6 (118-204)||(13017311-13017397)
chr6 (118-204)||(30978333-30978419)
chr6 (1-70)||(17733258-17733328)
chr6 (1-56)||(17106394-17106445)
chr6 (1-38)||(10290296-10290333)
chr6 (1-47)||(2372642-2372686)
chr6 (1-65)||(20186031-20186091)
chr6 (1-65)||(22149900-22149960)
chr6 (118-201)||(22221765-22221845)
chr6 (118-201)||(22247600-22247680)
chr6 (43-134)||(35026933-35027026)
[»] chr8 (26 HSPs)
chr8 (1-204)||(41778748-41778949)
chr8 (1-204)||(13097058-13097265)
chr8 (5-200)||(44008337-44008525)
chr8 (98-204)||(12575401-12575507)
chr8 (1-132)||(12820650-12820783)
chr8 (5-134)||(587537-587666)
chr8 (5-134)||(626256-626385)
chr8 (43-134)||(5828253-5828345)
chr8 (1-78)||(2847590-2847667)
chr8 (1-78)||(5952394-5952471)
chr8 (1-134)||(27805369-27805503)
chr8 (98-197)||(41836294-41836394)
chr8 (1-62)||(45155042-45155101)
chr8 (1-76)||(12104223-12104298)
chr8 (1-60)||(37681293-37681350)
chr8 (1-78)||(33383628-33383705)
chr8 (1-57)||(25231374-25231428)
chr8 (1-65)||(36710410-36710472)
chr8 (120-204)||(14418503-14418585)
chr8 (1-65)||(33883124-33883185)
chr8 (1-38)||(5538545-5538582)
chr8 (5-57)||(14349290-14349342)
chr8 (1-84)||(29612958-29613041)
chr8 (1-38)||(12583328-12583365)
chr8 (1-38)||(43681660-43681697)
chr8 (49-97)||(14627589-14627637)
[»] chr3 (26 HSPs)
chr3 (1-197)||(50096825-50097020)
chr3 (1-113)||(9155053-9155165)
chr3 (1-113)||(9158235-9158347)
chr3 (1-78)||(10557812-10557889)
chr3 (20-78)||(19194008-19194067)
chr3 (118-204)||(22626434-22626518)
chr3 (1-133)||(18551893-18552026)
chr3 (119-201)||(39563633-39563715)
chr3 (118-204)||(11138692-11138776)
chr3 (57-134)||(36036772-36036850)
chr3 (1-56)||(52309384-52309435)
chr3 (1-38)||(16244278-16244315)
chr3 (5-65)||(32287081-32287139)
chr3 (1-74)||(52200279-52200348)
chr3 (1-65)||(10881862-10881922)
chr3 (1-65)||(10902322-10902382)
chr3 (98-157)||(20536437-20536496)
chr3 (1-44)||(25260985-25261028)
chr3 (1-57)||(55034683-55034735)
chr3 (4-56)||(47051877-47051926)
chr3 (1-65)||(10960181-10960243)
chr3 (1-65)||(10963688-10963750)
chr3 (1-38)||(41977406-41977443)
chr3 (1-37)||(23298377-23298413)
chr3 (1-37)||(25585082-25585118)
chr3 (1-37)||(49742672-49742708)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-142)||(7453-7594)
[»] chr5 (27 HSPs)
chr5 (1-142)||(17944837-17944978)
chr5 (5-130)||(35432242-35432373)
chr5 (105-203)||(11988974-11989072)
chr5 (43-133)||(9690989-9691080)
chr5 (43-113)||(33320725-33320795)
chr5 (1-63)||(18239278-18239340)
chr5 (1-78)||(22036126-22036203)
chr5 (1-78)||(22039352-22039429)
chr5 (5-85)||(36357012-36357093)
chr5 (118-204)||(33575127-33575212)
chr5 (24-78)||(36700728-36700783)
chr5 (20-78)||(43103683-43103742)
chr5 (118-204)||(15532322-15532408)
chr5 (118-204)||(15542504-15542590)
chr5 (1-74)||(21332450-21332519)
chr5 (1-65)||(7271315-7271375)
chr5 (1-78)||(13423289-13423366)
chr5 (1-56)||(28787095-28787146)
chr5 (1-37)||(32838188-32838224)
chr5 (1-65)||(4099301-4099361)
chr5 (119-201)||(26712465-26712547)
chr5 (119-201)||(26982203-26982285)
chr5 (5-38)||(21335473-21335506)
chr5 (24-80)||(32228164-32228221)
chr5 (83-134)||(26338209-26338261)
chr5 (8-65)||(33552418-33552471)
chr5 (1-37)||(34832084-34832120)
[»] chr4 (33 HSPs)
chr4 (1-142)||(24605009-24605149)
chr4 (1-134)||(7394632-7394765)
chr4 (1-200)||(26060653-26060850)
chr4 (1-111)||(26703246-26703356)
chr4 (98-199)||(26062793-26062894)
chr4 (43-134)||(37176863-37176955)
chr4 (98-184)||(2541941-2542027)
chr4 (9-64)||(2436966-2437021)
chr4 (98-197)||(11649305-11649405)
chr4 (1-78)||(54900045-54900122)
chr4 (1-65)||(53094796-53094860)
chr4 (5-64)||(19859280-19859337)
chr4 (23-79)||(22884191-22884248)
chr4 (23-79)||(22935855-22935912)
chr4 (1-65)||(12786409-12786469)
chr4 (4-62)||(19864172-19864228)
chr4 (1-65)||(3797589-3797650)
chr4 (1-65)||(15811910-15811971)
chr4 (1-56)||(19821010-19821061)
chr4 (1-39)||(40795321-40795359)
chr4 (1-65)||(56199140-56199201)
chr4 (1-38)||(44165099-44165136)
chr4 (1-37)||(48415290-48415326)
chr4 (1-65)||(3720647-3720707)
chr4 (1-56)||(19827717-19827768)
chr4 (1-39)||(56195836-56195874)
chr4 (1-38)||(5681736-5681773)
chr4 (118-183)||(12172031-12172095)
chr4 (1-56)||(15404856-15404908)
chr4 (1-38)||(35510301-35510338)
chr4 (1-38)||(49270993-49271030)
chr4 (1-38)||(52006296-52006333)
chr4 (1-65)||(18860059-18860117)
[»] chr2 (28 HSPs)
chr2 (1-142)||(30719991-30720132)
chr2 (98-204)||(23673446-23673552)
chr2 (101-204)||(36326964-36327067)
chr2 (1-78)||(35077184-35077261)
chr2 (1-78)||(35080442-35080519)
chr2 (144-204)||(13710109-13710169)
chr2 (1-78)||(16881561-16881638)
chr2 (1-78)||(17039251-17039328)
chr2 (1-65)||(43723979-43724039)
chr2 (1-56)||(25138703-25138754)
chr2 (118-204)||(31528427-31528513)
chr2 (120-204)||(40018017-40018099)
chr2 (1-70)||(6276932-6277002)
chr2 (118-201)||(31626590-31626673)
chr2 (1-70)||(33749695-33749764)
chr2 (1-38)||(5666819-5666856)
chr2 (1-56)||(31427316-31427368)
chr2 (1-74)||(15470728-15470797)
chr2 (1-74)||(25820619-25820688)
chr2 (1-65)||(36808218-36808279)
chr2 (20-57)||(38132791-38132829)
chr2 (1-65)||(45457431-45457492)
chr2 (1-38)||(13971677-13971714)
chr2 (1-38)||(38460592-38460629)
chr2 (1-45)||(23259076-23259119)
chr2 (1-37)||(31585708-31585744)
chr2 (1-37)||(40781774-40781810)
chr2 (1-37)||(43207662-43207698)
[»] scaffold0043 (2 HSPs)
scaffold0043 (43-134)||(13818-13910)
scaffold0043 (43-134)||(11475-11567)
[»] scaffold0045 (2 HSPs)
scaffold0045 (43-130)||(90344-90432)
scaffold0045 (1-38)||(90080-90117)
[»] scaffold0401 (1 HSPs)
scaffold0401 (43-113)||(4507-4577)
[»] scaffold0083 (1 HSPs)
scaffold0083 (43-113)||(42849-42919)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-78)||(4299-4376)
[»] scaffold0996 (1 HSPs)
scaffold0996 (1-65)||(1693-1755)
[»] scaffold1657 (1 HSPs)
scaffold1657 (1-71)||(236-306)
[»] scaffold2073 (1 HSPs)
scaffold2073 (1-65)||(638-700)
[»] scaffold2047 (1 HSPs)
scaffold2047 (20-78)||(563-622)
[»] scaffold0146 (1 HSPs)
scaffold0146 (20-78)||(36107-36166)
[»] scaffold0440 (1 HSPs)
scaffold0440 (122-204)||(9901-9982)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-78)||(157365-157424)
[»] scaffold0363 (1 HSPs)
scaffold0363 (120-204)||(133-215)
[»] scaffold0352 (1 HSPs)
scaffold0352 (98-175)||(2719-2797)
[»] scaffold0330 (1 HSPs)
scaffold0330 (2-47)||(14235-14280)
[»] scaffold1063 (1 HSPs)
scaffold1063 (1-65)||(2784-2844)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-65)||(27408-27468)
[»] scaffold0757 (1 HSPs)
scaffold0757 (1-67)||(5647-5709)
[»] scaffold0520 (1 HSPs)
scaffold0520 (1-38)||(1314-1351)
[»] scaffold0496 (1 HSPs)
scaffold0496 (12-57)||(10153-10198)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-74)||(198432-198501)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-37)||(99009-99044)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 7e-88; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 23313265 - 23313468
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| |||    
T  23313265 ttagcaagtgtactaaaaatatatcgaaataataaaatttataagttcatatccacagggactgtttcaatttctactcggcataagcgttaaaataaag 23313364  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaa 200  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  23313365 gatgtattaaattcaagggtgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggttttagaaaattagagagaa 23313464  T
Q  201 gtat 204  Q
    ||||    
T  23313465 gtat 23313468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 23108229 - 23108029
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaa- 99  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||  ||| |||||||||||||||||||| | ||||||| ||||||| ||     
T  23108229 ttagcaactgtactaaaaatatatcaaagtaataaaatttataagtttgtatttacatggactgtttcaatttctactcgacaaaagccttaaaataaaa 23108130  T
Q  100 ggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagaga 199  Q
    ||||||||| |||||| || || ||||| ||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  23108129 ggatgtatttaattcaaggatgtcctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagaga 23108030  T
Q  200 a 200  Q
    |    
T  23108029 a 23108029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22083204 - 22083345
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  22083204 ttagcaagtgtactaaaattatatcgaagcaataaaatttataagttcgtatccacagggactgtttcaatttctactcggcaaaagcattaaaataaag 22083303  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatt 142  Q
    ||| |||||||||||  |||||||||||||||||| ||||||    
T  22083304 gatatattaaattcaatggtgccctaggcagttgagttgatt 22083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 3862007 - 3862114
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttt-tgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagag 196  Q
    ||||||||||||||||||  | |||||||||||||| |||||||||| ||||||||||||  ||||||||| |||||| |||||||||| ||||||||||    
T  3862007 aaggatgtattaaattcaatgatgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggttttataaaattagag 3862106  T
Q  197 agaagtat 204  Q
    ||||||||    
T  3862107 agaagtat 3862114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 16547321 - 16547229
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaa-ttcaggggtgccctaggcagttg 134  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||| || |||| |||||||||||||||    
T  16547321 aagttcgtatccacaaggattgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatttaagggttgccctaggcagttg 16547229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 16618341 - 16618433
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaa-ttcaggggtgccctaggcagttg 134  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||| || |||| |||||||||||||||    
T  16618341 aagttcgtatccacaaggattgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatttaagggttgccctaggcagttg 16618433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 17152273 - 17152181
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||    
T  17152273 aagtttgtatccacagagactgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatttatgggttgccctaggcagttg 17152181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 26808520 - 26808575
Alignment:
Q  23 atcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  26808520 atcgaagtaataaattttataagttcgtatccacagagactgtttcaatttctact 26808575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1636702 - 1636779
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  1636702 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 1636779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5189465 - 5189542
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  5189465 ttagcaagtgtactaact-tatatcgaagtaataaactttataagattcgtatccacagggactgtttcaacttctact 5189542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24423216 - 24423286
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaat 71  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| | | |||||||||    
T  24423216 ttagcaagtgtactaaaaatacattgaagtaataaaatttataagttcgtctccacatgaattgtttcaat 24423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44672797 - 44672874
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  44672797 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 44672874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 20436992 - 20436933
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  20436992 tatatcgaagtaataaaatttataacattcgtatccacagagactgtttcaatttctact 20436933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 1633475 - 1633534
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||||||||| |||||||    
T  1633475 tatatcgaagtaataaaatttataagattcgtttccaaagggactgtttcaacttctact 1633534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 33313118 - 33313036
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaac-gaattaaaaactataaaaaattggttttagaaaattagagagaa 200  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||||||  |||||  ||||||||||||||||  |||||||    
T  33313118 ggtgccctaggcagttgagttga-ttttgtaacataaacggaattaaaaataataaaggattggttttagaaaatctgagagaa 33313036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 5241959 - 5242001
Alignment:
Q  23 atcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  5241959 atcgaagtaataaaatttataagtttgtatccacagggactgt 5242001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 22952888 - 22952824
Alignment:
Q  7 agtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaat 71  Q
    ||||||||||||||  ||||||||||||||||||||||||| |  |||||| ||| |||||||||    
T  22952888 agtgtactaaaaatgcatcgaagtaataaaatttataagtttgcctccacatggattgtttcaat 22952824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17731164 - 17731104
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||    ||||||||||||||||| |||||||    
T  17731164 ttagcaagtgtactaaaaatgcatcgaagtaataaa----ataagttcgtatccacaaggactgt 17731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1960344 - 1960306
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatt 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  1960344 ttagcaagtgtactaaaaatatatcaaagtaataaaatt 1960306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10345520 - 10345469
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||    
T  10345520 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccac 10345469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11397830 - 11397891
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||  |||||||    
T  11397830 ttagcaagtgtactaaaaatgcatcgaagtaataaaat---taagttcgtatccacgaggactgt 11397891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 23759730 - 23759795
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt 184  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| ||||||||||    
T  23759730 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttt 23759795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48645811 - 48645742
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttc 74  Q
    ||||||||||||||||||||  ||||||||||||||    ||||||||||||||||  ||||||| | ||||||    
T  48645811 ttagcaagtgtactaaaaatgcatcgaagtaataaa----ataagttcgtatccacgaggactgtgttaatttc 48645742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 11279614 - 11279529
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattgg-ttttagaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||| |||||||||||||||  ||||||||| |  ||| ||||| |||||||| ||| |||||||||||    
T  11279614 ggtgccctaggcagttgagttga-ttttgtaacataaactgattaaaaacgaataaagattggtttttagaagatt-gagagaagtat 11279529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35961444 - 35961384
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||| ||||||||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  35961444 ttagaaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 35961384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4595779 - 4595816
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  4595779 ttagcaagtgtactaaaaatgcatcgaagtaataaaat 4595816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26557843 - 26557806
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||||||  |||||||||||||||||    
T  26557843 ttagcaagtgtactaaaaacgtatcgaagtaataaaat 26557806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33844390 - 33844427
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  33844390 ttagcaagtgtgctaaaaatgtatcgaagtaataaaat 33844427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 6214132 - 6214180
Alignment:
Q  69 aatttctacttggcaaaagcgttaaaatgaaggatgtattaaattcagg 117  Q
    |||||||||| | |||||| |||||||| ||| ||||||||||||||||    
T  6214132 aatttctactcgacaaaagtgttaaaataaagaatgtattaaattcagg 6214180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 26075463 - 26075495
Alignment:
Q  23 atcgaagtaataaaatttataagttcgtatcca 55  Q
    |||||| ||||||||||||||||||||||||||    
T  26075463 atcgaaataataaaatttataagttcgtatcca 26075495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 26099250 - 26099282
Alignment:
Q  23 atcgaagtaataaaatttataagttcgtatcca 55  Q
    |||||| ||||||||||||||||||||||||||    
T  26099250 atcgaaataataaaatttataagttcgtatcca 26099282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 34066584 - 34066382
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||||| |||    
T  34066584 ttagtaagtgtactaaaa-tatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcggaaaaaactttaaaataaag 34066486  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaa 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  34066485 gatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaa 34066386  T
Q  201 gtat 204  Q
    ||||    
T  34066385 gtat 34066382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 8435476 - 8435280
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||| |||    
T  8435476 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgcatccacatggactgtttcaatttctactctgcaaaagcgttaaaataaag 8435377  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||  | ||||||| ||||||  | | |||||||||||||||||    
T  8435376 gatgtattaaattcaagagtgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaaagttggtttttagaaaattagaga 8435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 23990140 - 23990325
Alignment:
Q  1 ttagcaagtgtactaaaaa-tatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaa 99  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  || ||| |||||||||| | |||| |||||||||||||| ||    
T  23990140 ttagcaagtgtactaaaaaatatatcgaagtaatcaaatttataagttcgtatcca--ggaactatttcaatttcaaattggaaaaagcgttaaaataaa 23990237  T
Q  100 ggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttaga 187  Q
    |||||||||||||||||   ||| |||||||||||| || |||||||||||||| ||| ||||||||| |||||| || |||||||||    
T  23990238 ggatgtattaaattcagtaatgctctaggcagttgagttaatttttgtaacatatacggattaaaaacaataaaagataggttttaga 23990325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22456498 - 22456671
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||| |||    
T  22456498 ttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcagcaaaaacgataaaataaag 22456597  T
Q  101 gatgtattaaattc-aggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaa 174  Q
    |||||||||||||| |  | |||| |||||||||| |||| ||||| ||| |||||| | |||||||| ||||||    
T  22456598 gatgtattaaattcaaaagttgccataggcagttggattggtttttataa-ataaactatttaaaaacgataaaa 22456671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 49148138 - 49147993
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||    
T  49148138 ttagtaagtgtactaaaaataaatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcagcaaaaacgttaaaataaag 49148039  T
Q  101 gatgtattaaattc-aggggtgccctaggcagttgaattgattttt 145  Q
    |||||||||||||| |  | ||||||||||||||| |||| |||||    
T  49148038 gatgtattaaattcaaaagttgccctaggcagttggattggttttt 49147993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22447954 - 22448065
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||| |||    
T  22447954 ttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcatatccacagggactgtttcaatttctactcagcaaaaacgttaaaataaag 22448053  T
Q  101 gatgtattaaat 112  Q
    ||||||||||||    
T  22448054 gatgtattaaat 22448065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22453188 - 22453299
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||| |||    
T  22453188 ttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcatatccacagggactgtttcaatttctactcagcaaaaacgttaaaataaag 22453287  T
Q  101 gatgtattaaat 112  Q
    ||||||||||||    
T  22453288 gatgtattaaat 22453299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17618867 - 17618981
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  17618867 ttagcaaatgtactaaaaatatatcgaagtaataaaatttataagttcatattcacagggactgtttcaatttctacttgacaaaaacgttaaaataaag 17618966  T
Q  101 gatgtattaaattca 115  Q
     || |||||||||||    
T  17618967 aatatattaaattca 17618981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 41 - 204
Target Start/End: Original strand, 16190222 - 16190385
Alignment:
Q  41 ataagttcgtatccacagggactgtt-tcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattcaggggtgccctaggcagttgaattg 139  Q
    |||| |||||||||||  |||||||| | ||||| || | | ||||| ||||||||| ||||||||||||||||||  ||||||||||| | |||| |||    
T  16190222 ataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaaataaaggatgtattaaattcaatggtgccctaggaaattgagttg 16190321  T
Q  140 atttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaagtat 204  Q
    || ||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||    
T  16190322 atgtttgtaacataaacgaattaaaaacaat-aaagattggttttagaaaattaaagagaagtat 16190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 3087513 - 3087619
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcg-ttaaaatgaaggat 103  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||| |||| ||||||| ||||||||||| |||||  || ||||||| ||||||    
T  3087513 caagtgtactaaaa-tatatcgaagtaataaaatttataagtttgtatccgcaggaactgttttaatttctacttagcaaagacgtttaaaattaaggat 3087611  T
Q  104 gtattaaa 111  Q
    || |||||    
T  3087612 gtgttaaa 3087619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 1936770 - 1936664
Alignment:
Q  101 gatgtattaaattca--ggggtgccctaggcagttgaattgatttttgtaacataaac-gaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    |||||||||||||||  ||| || ||||||||||||| |||||| ||||| ||||||| |||||||||||  |||||  |||||||||||||||||||||    
T  1936770 gatgtattaaattcaatgggttgacctaggcagttgagttgattgttgtatcataaactgaattaaaaacggtaaaattttggttttagaaaattagaga 1936671  T
Q  198 gaagtat 204  Q
    |||||||    
T  1936670 gaagtat 1936664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25662860 - 25662937
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  25662860 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatccacatggactgtttcaacttctact 25662937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28138613 - 28138690
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  28138613 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 28138690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28141863 - 28141940
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  28141863 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 28141940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 14159085 - 14159144
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  14159085 tatatcgaagtaataaaatttataagattcgtatctacagggactgtttcaacttctact 14159144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21911049 - 21911126
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||| |||||||||| |||| |||||||||||| |||||||||||| |||||||    
T  21911049 ttagcaagtgtactaact-tatatcgaagaaataaaatttgtaagattcgtatccacatggactgtttcaacttctact 21911126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2405868 - 2405808
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  2405868 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 2405808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34732111 - 34732157
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagtt 47  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||    
T  34732111 ttagcaagtgtactaaaaatgaaccgaagtaataaaatttataagtt 34732157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 49852903 - 49852940
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  49852903 ttagcaagtgtactaaaaatgtatcgaagtaataaaat 49852940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 39546387 - 39546280
Alignment:
Q  98 aaggatgtattaaattcaggggt-gccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaa-attaga 195  Q
    ||||||||||||||||||   || |||||||||||||| |||| |||||||||| |||||| |   ||||| || |||| ||||||||| ||| ||||||    
T  39546387 aaggatgtattaaattcaattgttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaat-aaaagttggttttaaaaatattaga 39546289  T
Q  196 gagaagtat 204  Q
    |||||||||    
T  39546288 gagaagtat 39546280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45941774 - 45941738
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  45941774 ttagcaagtgtactaaaaatgtatcgaagtaataaaa 45941738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21110923 - 21110960
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  21110923 ttagcaagtgtactaaaaatgcatcgaagtaataaaat 21110960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 21153399 - 21153331
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaatt-gatttttgtaacataaacgaattaaaa 165  Q
    |||||||||||||||| | || ||||||||||||||| ||| | |||||||||||| ||| | ||||||    
T  21153399 aaggatgtattaaatttatggttgccctaggcagttggattagttttttgtaacattaactatttaaaa 21153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 7e-85; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 14 - 204
Target Start/End: Complemental strand, 16883903 - 16883713
Alignment:
Q  14 taaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaatt 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  16883903 taaaaatatatcgaagtaataaaatttataagttcgtatccgcagggactgtttcaatttctactcggtaaaagcgttaaaataaaggatgtattaaatt 16883804  T
Q  114 caggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaagtat 204  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  16883803 caagggttccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtat 16883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 11183841 - 11184037
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| |||    
T  11183841 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcatatccacagggactgtttcaatttctacttggaaaaaacgttaaaataaag 11183940  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    ||||||||||||||| | || |||||||||||||| ||||||||||||||||||||| | ||||||| ||||||  | | |||||||||||||||||    
T  11183941 gatgtattaaattcaagagttccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaagttggtttttagaaaattagaga 11184037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 20527166 - 20527371
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||| ||     
T  20527166 ttagcaagtgtactacaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcgatttctactcgataaaagcgttaaaataaat 20527265  T
Q  101 gatgtattaaattc-aggggtgccctaggcagttgaattgatttttgtaacataaac-gaattaaaaactataaaaaattggtttt-agaaaattagaga 197  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||| |||||  || ||||||| || |||| |||||||| |||| ||||||||    
T  20527266 gatgtattaaattcaaaggttgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaat-aaaagttggttttaagaatattagaga 20527364  T
Q  198 gaagtat 204  Q
    |||||||    
T  20527365 gaagtat 20527371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28118190 - 28118049
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  28118190 ttagcaagtgtattaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcggcaaaagcgttaaaataaag 28118091  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatt 142  Q
    ||| |||||||||||  |||||||||||||||||| ||||||    
T  28118090 gatatattaaattcaatggtgccctaggcagttgagttgatt 28118049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 12983385 - 12983558
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||| ||||||||| |||    
T  12983385 ttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcgtatccacaggggctgtttcaatttctactcagcaaaaacgttaaaataaag 12983484  T
Q  101 gatgtattaaattc-aggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaa 174  Q
    |||||||||||||| |  | ||||||||||||||| |||| ||||| ||| |||||| | |||||||| ||||||    
T  12983485 gatgtattaaattcaaatgttgccctaggcagttggattggtttttataa-ataaactatttaaaaacgataaaa 12983558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 9313551 - 9313687
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||||||     
T  9313551 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacaaggactgtttcaatttctactcagcaaaagcgttaaaataaaggata 9313650  T
Q  105 tattaaattcaggggtgccctaggcagttgaattgatt 142  Q
    |||||||||||  || ||||||||||||||| ||||||    
T  9313651 tattaaattcaatgg-gccctaggcagttgagttgatt 9313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12980498 - 12980696
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||    
T  12980498 ttagcaagtgtactaaaaataaattgaagtaataaaatttataagttcgtatccacatggactgtttcaatttctactcagcaaaaacgttaaaataaag 12980597  T
Q  101 gatgtattaaattc-aggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagaga 199  Q
    |||||||||||||| |  | ||||||||||||||| |||| ||||| ||| |||||| | |||||||| ||||||  |||||| | |||||||| |||||    
T  12980598 gatgtattaaattctaaagttgccctaggcagttggattggtttttataa-ataaactatttaaaaacgataaaagcttggttct-gaaaattaaagaga 12980695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 15578676 - 15578810
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||    
T  15578676 ttagcaagtgtattaaaaatatatcgaaggaataaaatttataagttcgtatctacagggactatttcaatttctactcggcaaaagcgttaaaataaag 15578775  T
Q  101 gatgtattaaattca-ggggtgccctaggcagttg 134  Q
    ||||||||||||| | ||| |||||||||||||||    
T  15578776 gatgtattaaatttatgggttgccctaggcagttg 15578810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16731686 - 16731609
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16731686 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctact 16731609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2773166 - 2773275
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||   |||||||| |||    
T  2773166 ttagcaagtgtactaaaaatgaatcgaagtaatataatttataagttcgtatccactgggattgtttcaatttctactcggcaaagatgttaaaataaag 2773265  T
Q  101 gatgtattaa 110  Q
    ||||| ||||    
T  2773266 gatgtgttaa 2773275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 12747127 - 12747035
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||    
T  12747127 aagttcgtatccacaaggactgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatttatgggttgccctaggcagttg 12747035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20189191 - 20189301
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||| ||||   |||||| |||||||| |||    
T  20189191 ttagcaagtgtattaaaaatatatcgaagtaataaaatttataagttcgtatctatagaaactgtttcaatttatactccacaaaagagttaaaataaag 20189290  T
Q  101 gatgtattaaa 111  Q
    ||||| |||||    
T  20189291 gatgtgttaaa 20189301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22146800 - 22146690
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||| ||||   |||||| |||||||| |||    
T  22146800 ttagcaagtgtattaaaaatatatcgaagtaataaaatttataagttcgtatctatagaaactgtttcaatttatactccacaaaagagttaaaataaag 22146701  T
Q  101 gatgtattaaa 111  Q
    ||||| |||||    
T  22146700 gatgtgttaaa 22146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 28894281 - 28894372
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagtt 133  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| | ||| ||||||||||||||    
T  28894281 aagttcgtatccacatggactgtttcaatttctactcggcaaaaacgttaaaataaaggatgtattaaatttatgggttgccctaggcagtt 28894372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 19664767 - 19664873
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    |||||||||||||||||| || ||||||||||||||| |||| | ||||||| ||||||| ||||||||| ||||||  ||||||| |||||||||||||    
T  19664767 aaggatgtattaaattcaaggttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaagaaaattagaga 19664866  T
Q  198 gaagtat 204  Q
    || ||||    
T  19664867 gatgtat 19664873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 32427441 - 32427344
Alignment:
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagaga 199  Q
    ||||||||||||||| || |||||||| |||||| |||| | ||||||| ||||||||||||||||| || |||  |||||||||||||||||||||||    
T  32427441 gatgtattaaattcaaggttgccctag-cagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggttttagaaaattagagaga 32427344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28111578 - 28111640
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||||    
T  28111578 ttagcaagtgtactaaaactat--cgaagtaataaaatttataagttcgtatccacatggactgt 28111640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 965104 - 965027
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||  ||||||| ||||||||||||||||| |||||||    
T  965104 ttagcaagtgtactaact-tatatcgaagtaataaaatttataaaattcgtattcacagggactgtttcaacttctact 965027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6514345 - 6514283
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||| |||||||    
T  6514345 ttagcaagtgtactaaaactat--cgaagtaataaaatttataagttcgtatctacaaggactgt 6514283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13005542 - 13005488
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccaca 57  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  13005542 ttagcaagtgtactaaaactat--cgaagtaataaaatttataagttcgtatccaca 13005488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14281291 - 14281353
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||| ||||||    
T  14281291 ttagcaagtgtactaaaactata--gaagtaataaaatttataagtttgtatccacagagactgt 14281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 15540713 - 15540613
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    |||||||||||||||||| || | |||||||||||||| |||| |||| ||| ||||| | ||||||||| ||||||  || |||||||||||||| |||    
T  15540713 aaggatgtattaaattcaaggtttccctaggcagttgagttga-ttttctaaaataaagggattaaaaacaataaaagtttagttttagaaaattaaaga 15540615  T
Q  198 ga 199  Q
    ||    
T  15540614 ga 15540613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 28107530 - 28107584
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacaggga 61  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||    
T  28107530 caagtgtactaaaactat--cgaagtaataaaatttataagttcgtatccacaggga 28107584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5260159 - 5260099
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggact 63  Q
    ||||||| |||||||||| |||  ||||||||||||||||||||||||||||||||| |||||    
T  5260159 ttagcaaatgtactaaaactat--cgaagtaataaaatttataagttcgtatccacaaggact 5260099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 15535199 - 15535105
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaatta 193  Q
    |||||||||||||||||| || |||||||||||||||| |||| |||||||| | |||   ||||||||| ||||||  ||||||||| |||||||    
T  15535199 aaggatgtattaaattcaaggttgccctaggcagttgagttga-ttttgtaaaacaaatagattaaaaacaataaaagtttggttttacaaaatta 15535105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 13017311 - 13017397
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt--agaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| ||||||||||  |||||||| |||||||||||    
T  13017311 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttcagaaaatt-gagagaagtat 13017397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 30978333 - 30978419
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt--agaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| ||||||||||  |||||||| |||||||||||    
T  30978333 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtat 30978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17733258 - 17733328
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataa--gttcgtatccacagggactgtttcaa 70  Q
    ||||||||||||||||   |||||||||||||||||||||||||   |||||||||| ||||||||||||||    
T  17733258 ttagcaagtgtactaact-tatatcgaagtaataaaatttataaagattcgtatccatagggactgtttcaa 17733328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17106394 - 17106445
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||    
T  17106394 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccac 17106445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10290333 - 10290296
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  10290333 ttagcaagtgtactaaaaatgtatcgaagtaataaaat 10290296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2372686 - 2372642
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagtt 47  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  2372686 ttagcaagtgtactaaaactat--cgaagtaataaaatttataagtt 2372642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20186091 - 20186031
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||| ||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  20186091 ttagcaagtgcactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 20186031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22149900 - 22149960
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||| ||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  22149900 ttagcaagtgcactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 22149960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 22221845 - 22221765
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattgg-ttttagaaaattagagagaag 201  Q
    |||||||||||||||||| |||| ||| |||  |||||| |||||||||| ||||| |||||| |||||||||||| ||||||||    
T  22221845 ggtgccctaggcagttgagttga-tttagta--ataaactaattaaaaacaataaagaattggtttttagaaaatt-gagagaag 22221765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 22247680 - 22247600
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattgg-ttttagaaaattagagagaag 201  Q
    |||||||||||||||||| |||| ||| |||  |||||| |||||||||| ||||| |||||| |||||||||||| ||||||||    
T  22247680 ggtgccctaggcagttgagttga-tttagta--ataaactaattaaaaacaataaagaattggtttttagaaaatt-gagagaag 22247600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 35026933 - 35027026
Alignment:
Q  43 aagttcgtatccacagggactgtt-tcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    ||||||||||||||| |||  ||| | |||||||||||  |||   ||||||||| |||||||||||||||| | ||| |||||||||||||||    
T  35026933 aagttcgtatccacaaggaacgttgttaatttctacttaacaagttcgttaaaataaaggatgtattaaatttatgggttgccctaggcagttg 35027026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 4e-71; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 41778748 - 41778949
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| ||||||| ||||||||| ||     
T  41778748 ttagcaactgtactaaaaatatatcgaagtaataaaatttataagttcgtatt-acaaggactgtttcaatttctactcggcaaaaacgttaaaataaaa 41778846  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaa 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||| |||| ||||||    
T  41778847 gatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagatt-gatttagaagattaaagagaa 41778945  T
Q  201 gtat 204  Q
    ||||    
T  41778946 gtat 41778949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13097265 - 13097058
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||||| ||||||||| |||    
T  13097265 ttagcaagtgtactaaaaatatatcgaagtaataaaatttata-gttcgtattcacagggactatttcaatttctactcggcaaaaacgttaaaataaag 13097167  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacg----aat-taaaaactataaaaaattggttttagaaaattaga 195  Q
    |||||||||||||||  |||| |||| | |||||||||| ||| ||||||||||| |    |||  |||||| |||||| ||| ||||||||||||||||    
T  13097166 gatgtattaaattcaatggtggcctatggagttgaattggtttgtgtaacataaaagtgataataaaaaaacaataaaagattagttttagaaaattaga 13097067  T
Q  196 gagaagtat 204  Q
    |||||||||    
T  13097066 gagaagtat 13097058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 44008525 - 44008337
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatg 104  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||| ||  |||    
T  44008525 caagtgtactaaaaatatatcaaagtaataaaatttataagttcgtatttacatggactgtttcaatttctacttggcaaaaacgttaaaataaattatg 44008426  T
Q  105 tattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaa 200  Q
    |||||||||||  |||||||||| ||||||| ||||||| ||||||| ||| | ||||||| |       ||||||||||||||||||||| ||||    
T  44008425 tattaaattcaatggtgccctagacagttgatttgatttatgtaacaaaaaaggattaaaagc-------aattggttttagaaaattagaaagaa 44008337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 12575401 - 12575507
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||   ||||||||| |||||| ||||||||||||||||||||||    
T  12575401 aaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggttttagaaaattagaga 12575500  T
Q  198 gaagtat 204  Q
    |||||||    
T  12575501 gaagtat 12575507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 12820650 - 12820783
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttat-aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaa 99  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||   |||||||| ||    
T  12820650 ttagcaagtgtgctaaaaatatatcgaagtaataaaatttataaagttcgtatccacatggactgtttcaatttctactcggcaaagatgttaaaataaa 12820749  T
Q  100 ggatgtattaaattca-ggggtgccctaggcagt 132  Q
    |||||| |||| || | ||| |||||||||||||    
T  12820750 ggatgtgttaagtttatgggttgccctaggcagt 12820783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 587666 - 587537
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatg 104  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| | ||||  ||||||||  |||||||    
T  587666 caagtgtattaaaaatataacgaagtaataaaatttataagttcgtatccgcatggactgtttcaatttctactcgacaaagacgttaaaactaaggatg 587567  T
Q  105 tattaaattcaggggtgccctaggcagttg 134  Q
    | ||||| | | || | |||||||||||||    
T  587566 tgttaaaattatggttaccctaggcagttg 587537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 626256 - 626385
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatg 104  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| | || |  ||||||||  |||||||    
T  626256 caagtgtattaaaaatataacgaagtaataaaatttataagttcgtatccgcatggactgtttcaatttctactcgtcatagacgttaaaactaaggatg 626355  T
Q  105 tattaaattcaggggtgccctaggcagttg 134  Q
    | ||||| | | || | |||||||||||||    
T  626356 tgttaaaattatggttaccctaggcagttg 626385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 5828345 - 5828253
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    ||||||||||||||| |||||||||||||||||||| | ||||||||||||||| ||||||| |||||||| | ||| |||||||||||||||    
T  5828345 aagttcgtatccacatggactgtttcaatttctactcgtcaaaagcgttaaaataaaggatgcattaaatttatgggttgccctaggcagttg 5828253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2847590 - 2847667
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  2847590 ttagcaagtgtactaact-tatatcgaagtaataacatttataagattcgtatccacagggactgtttcaacttctact 2847667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5952471 - 5952394
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  5952471 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatccacaaggactgtttcaacttctact 5952394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 27805369 - 27805503
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaa 99  Q
    ||||||||||||||||||||  ||| || |||||||||||||||| ||||| | |||||||| |||||||||||||||| | ||| |  ||||  || ||    
T  27805369 ttagcaagtgtactaaaaatgcatcaaaataataaaatttataagattcgtcttcacagggattgtttcaatttctactcgacaataatgttatcattaa 27805468  T
Q  100 ggatgtattaaattcaggggtgccctaggcagttg 134  Q
    |||||||||||| |  ||| || ||||||||||||    
T  27805469 ggatgtattaaaatgggggttgtcctaggcagttg 27805503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 41836294 - 41836394
Alignment:
Q  98 aaggatgtattaaattca--ggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattaga 195  Q
    |||||||||| |||||||  || ||||||||||||||||| |||| |||||||| ||||||||| ||||||| || |||| |||||||||||||||| ||    
T  41836294 aaggatgtataaaattcaatggtgtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaat-aaaagttggttttagaaaatttga 41836392  T
Q  196 ga 197  Q
    ||    
T  41836393 ga 41836394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45155042 - 45155101
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggac 62  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  45155042 ttagcaagtgtactaaaactat--cgaagtaataaaatttataagttcgtatccacagggac 45155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12104223 - 12104298
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttcta 76  Q
    ||||||||||| |||||  |||||||||||||||||||||||||| || ||||||| |||||||||||||| |||||    
T  12104223 ttagcaagtgtgctaaac-tatatcgaagtaataaaatttataagatttgtatccatagggactgtttcaacttcta 12104298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37681293 - 37681350
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacaggg 60  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||| ||||||||||||    
T  37681293 ttagcaagtgtactaataatat--cgaagtaataaaatttataagtttgtatccacaggg 37681350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33383705 - 33383628
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   ||||| |||||||||| ||||||||| |||||||||||| |||||||||||| |||||||    
T  33383705 ttagcaagtgtactaact-tatatggaagtaataatatttataagattcgtatccacaaggactgtttcaacttctact 33383628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25231428 - 25231374
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccaca 57  Q
    |||||||||||||||||| |||  |||||||||||| ||||||||||||||||||||    
T  25231428 ttagcaagtgtactaaaactat--cgaagtaataaattttataagttcgtatccaca 25231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36710410 - 36710472
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||| | |||  | |||||||||| ||||||||||||||||||||||||||||    
T  36710410 ttagcaagtgtactaagactat--caaagtaataaagtttataagttcgtatccacagggactgt 36710472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 14418585 - 14418503
Alignment:
Q  120 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttta-gaaaattagagagaagtat 204  Q
    |||||||||||||||| ||| |||||  ||||||||| |||||||||| ||||||  ||||||||| ||| |||||||||||||||    
T  14418585 tgccctaggcagttgagttggttttt--aacataaacaaattaaaaacaataaaag-ttggttttaagaatattagagagaagtat 14418503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33883124 - 33883185
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||  |||||||    
T  33883124 ttagcaagtgtactaaaaatgcatcgaagtaataaaat---taagttcgtatccacgaggactgt 33883185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5538545 - 5538582
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5538545 ttagcaagtgtactaaaaatgtatcgaagtaataaaat 5538582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 14349342 - 14349290
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccaca 57  Q
    |||||||||||||||| ||||||||||||||  |||||||||| || ||||||    
T  14349342 caagtgtactaaaaatgtatcgaagtaataatttttataagtttgtctccaca 14349290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 29612958 - 29613041
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaa 84  Q
    |||||||||||| |||||||  ||| |||| ||||||||||||| || || || ||| ||| ||||||||| || |||||||||    
T  29612958 ttagcaagtgtattaaaaatgcatcaaagtgataaaatttataaatttgtttcaacatggattgtttcaatctcaacttggcaa 29613041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12583365 - 12583328
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  12583365 ttagcaagtgtactaaaaatgtatcgaaataataaaat 12583328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43681660 - 43681697
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  43681660 ttagcaagtgtactaaaaatgcatcgaagtaataaaat 43681697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 14627637 - 14627589
Alignment:
Q  49 gtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatg 97  Q
    |||||||| |||| |||||||||||||||| | |||||| |||||||||    
T  14627637 gtatccactgggagtgtttcaatttctactcgacaaaagtgttaaaatg 14627589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 1e-64; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 50097020 - 50096825
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||| |||    
T  50097020 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcgg-aaaaaagttaaaataaag 50096922  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    ||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||| | |||||||  |||||  | | |||||||||||||||||    
T  50096921 gatgtattaaattcaagagtgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaagttggtttttagaaaattagaga 50096825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9155165 - 9155053
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  9155165 ttagcaagtgtactaaaaataaatcgaaataataaaatttataagttcgtatccacagggactgtttcaatttctactcggcaaaaacgttaaaatcaag 9155066  T
Q  101 gatgtattaaatt 113  Q
    |||||||||||||    
T  9155065 gatgtattaaatt 9155053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9158347 - 9158235
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  ||||  |||||||||||||||||||||||| ||||||| ||||||||| |||    
T  9158347 ttagcaagtgtactaaaaataaatcgaagtaataaaatttataagtatgtatttacagggactgtttcaatttctactcggcaaaaacgttaaaatcaag 9158248  T
Q  101 gatgtattaaatt 113  Q
    |||||||||||||    
T  9158247 gatgtattaaatt 9158235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10557812 - 10557889
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  10557812 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 10557889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 19194067 - 19194008
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  19194067 tatatcgaagtaataaaatttataagattcgtatccacaaggactgtttcaatatctact 19194008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 22626434 - 22626518
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| |||||| ||||||||||| |||||||||||    
T  22626434 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggatttagaaaatt-gagagaagtat 22626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 18552026 - 18551893
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||| ||||||   || |||||||||||||| | ||||||||||| ||  ||||||||| |||||||||  ||||||  | ||||||| |||    
T  18552026 ttagcaagtgtaataaaaaagaattgaagtaataaaattcacaagttcgtatcaactaggactgttttaatttctacaaggcaaagacattaaaattaag 18551927  T
Q  101 gatgtattaaattca-ggggtgccctaggcagtt 133  Q
    ||||| ||||||| | ||| ||| ||||||||||    
T  18551926 gatgtgttaaatttatgggttgctctaggcagtt 18551893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 39563633 - 39563715
Alignment:
Q  119 gtgccctaggcagttgaattgatttttgtaacataaac-gaattaaaaactataaaaaattggttttagaaaattagagagaag 201  Q
    ||||||||||||||||| |||| |||||||||||||||  |||||||||   ||||| ||||||||||||||||  ||||||||    
T  39563633 gtgccctaggcagttgagttga-ttttgtaacataaacaaaattaaaaatagtaaaagattggttttagaaaatctgagagaag 39563715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 11138692 - 11138776
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||| ||| |||||||||||  ||||||||| ||| | |||||| || |||||||| |||||||||||    
T  11138692 ggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaatatagaattggattcagaaaatt-gagagaagtat 11138776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 36036772 - 36036850
Alignment:
Q  57 agggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattc-aggggtgccctaggcagttg 134  Q
    |||||||||||||||||||| |   ||||||||||||||| ||  ||||||||||||| | || |||||||||||||||    
T  36036772 agggactgtttcaatttctattcaacaaaagcgttaaaataaattatgtattaaattcaatggttgccctaggcagttg 36036850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52309384 - 52309435
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||    
T  52309384 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccac 52309435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16244315 - 16244278
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  16244315 ttagcaagtgtactaaaaatacatcgaagtaataaaat 16244278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 32287081 - 32287139
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||| |||  ||||||||||||||||||||||| ||||||| ||| |||||    
T  32287081 caagtgtactaaaactat--cgaagtaataaaatttataagtttgtatccataggaactgt 32287139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52200348 - 52200279
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttc 74  Q
    |||||||||||| ||||||| |||||||||||||||    ||||||||||||||||  ||||||| | ||||||    
T  52200348 ttagcaagtgtattaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgtgttaatttc 52200279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10881922 - 10881862
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||| ||||||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  10881922 ttagcatgtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 10881862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10902382 - 10902322
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||||| |||| ||||||||||    ||||||||||||||||  |||||||    
T  10902382 ttagcaagtgtactaaaaatgtatctaagtaataaa----ataagttcgtatccacgaggactgt 10902322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 20536437 - 20536496
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacg 157  Q
    ||||||||| |||||||| ||||||||||||||||||  |||| || ||||||| |||||    
T  20536437 aaggatgtagtaaattcaagggtgccctaggcagttgggttgacttgtgtaacacaaacg 20536496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25261028 - 25260985
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataa 44  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||    
T  25261028 ttagcaagtgtactaaaaatgcatcaaagtaataaaatttataa 25260985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 55034683 - 55034735
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccaca 57  Q
    ||||||||||||||||||||  ||||||||||||||    |||||||||||||||||    
T  55034683 ttagcaagtgtactaaaaatgcatcgaagtaataaa----ataagttcgtatccaca 55034735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 47051926 - 47051877
Alignment:
Q  4 gcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    |||||||||||||||||  ||||||||||||||||   |||||||||||||||    
T  47051926 gcaagtgtactaaaaatgcatcgaagtaataaaat---taagttcgtatccac 47051877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10960243 - 10960181
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||| ||||||||| |||  ||||||||||||| | ||||||||||||||||  |||||||    
T  10960243 ttagcaagcgtactaaaactat--cgaagtaataaaaataataagttcgtatccacgaggactgt 10960181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10963750 - 10963688
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||| ||||||||| |||  ||||||||||||| | ||||||||||||||||  |||||||    
T  10963750 ttagcaagcgtactaaaactat--cgaagtaataaaaataataagttcgtatccacgaggactgt 10963688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41977443 - 41977406
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  41977443 ttagcaagtgtattaaaaatgtatcgaagtaataaaat 41977406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23298377 - 23298413
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||| |||||||||| |||||    
T  23298377 ttagcaagtgtactaaaaatgtatcgaagtagtaaaa 23298413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25585118 - 25585082
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  25585118 ttagcaagtgtactaaaaacgtatcgaagtaataaaa 25585082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49742672 - 49742708
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  49742672 ttagcaagtgtactaaaaacgtatcgaagtaataaaa 49742708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7594 - 7453
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||    
T  7594 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacaaggactgtttcaatttctactcggaaaaagcgttaaaataaag 7495  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatt 142  Q
    ||| |||||||||||  |||||||||||||||||| ||||||    
T  7494 gatatattaaattcaatggtgccctaggcagttgagttgatt 7453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17944978 - 17944837
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| |||    
T  17944978 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagagactgtttcaatttctactcggcaaaagcattaaaataaag 17944879  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatt 142  Q
    ||| |||||||||||  |||||||||||||||||| ||||||    
T  17944878 gatatattaaattcaatggtgccctaggcagttgagttgatt 17944837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 35432242 - 35432373
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaa-----atttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaa 99  Q
    |||||||| |||||||  ||||||||||||||     ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||    
T  35432242 caagtgtattaaaaatgcatcgaagtaataaattaaaatttataagttcgtatccacagggactgtttcaatttttactcgacaaaagcgttaaaataaa 35432341  T
Q  100 ggatgtattaaattca-ggggtgccctaggca 130  Q
     ||||||||||||| | ||| |||||||||||    
T  35432342 tgatgtattaaatttatgggttgccctaggca 35432373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 11988974 - 11989072
Alignment:
Q  105 tattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaagta 203  Q
    |||||||||||  ||| |||||||||||||| ||||||||||||||||||||  ||||||||| |||||| |||| |||||||||||||||||||||||    
T  11988974 tattaaattcaatggtcccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgattttagaaaattagagagaagta 11989072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 43 - 133
Target Start/End: Complemental strand, 9691080 - 9690989
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagtt 133  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||    
T  9691080 aagttcgtatccacagagattgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatttatgggttgccctaggcagtt 9690989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 33320725 - 33320795
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaatt 113  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  33320725 aagttcgtatccacagggactgcttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatt 33320795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18239278 - 18239340
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggact 63  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  18239278 ttagcaagtgtattaaaaatgaatcgaagtaataaaatttataagttcgtatccacatggact 18239340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22036203 - 22036126
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  22036203 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 22036126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22039429 - 22039352
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| |||| |||||||||||||| |||||||    
T  22039429 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccatagggactgtttcaacttctact 22039352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 36357093 - 36357012
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctacttggcaaa 85  Q
    ||||||||||||||||  ||||||||||||| ||||||||| ||||| |||||| |||| ||||||||||||| | ||||||    
T  36357093 caagtgtactaaaaatgcatcgaagtaataatatttataagattcgtctccacatggaccgtttcaatttctattcggcaaa 36357012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 33575212 - 33575127
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt-agaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| |||||||||| |||||||| |||||||||||    
T  33575212 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttagaaaatt-gagagaagtat 33575127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 36700783 - 36700728
Alignment:
Q  24 tcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  36700783 tcgaagtaataaaatttataagattcatatccacagggactgtttcaacttctact 36700728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 43103683 - 43103742
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||||||| |||||||| | |||||||||||||| |||||||    
T  43103683 tatatcgaagtaataaaatttataagattcgtatctatagggactgtttcaacttctact 43103742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 15532322 - 15532408
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt--agaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| ||||||||||  |||||||| |||||||||||    
T  15532322 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtat 15532408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 15542504 - 15542590
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt--agaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| ||||||||||  |||||||| |||||||||||    
T  15542504 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtat 15542590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21332450 - 21332519
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttc 74  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||  ||||||| | ||||||    
T  21332450 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgtgttaatttc 21332519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7271375 - 7271315
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  7271375 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 7271315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13423289 - 13423366
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||| ||||||||||||  ||||| |||||||||||||||||||| |||||||| |||  ||||||||||| |||||||    
T  13423289 ttagtaagtgtactaaac-tatattgaagtaataaaatttataagattcgtatctacaaagactgtttcaacttctact 13423366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28787095 - 28787146
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||    
T  28787095 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccac 28787146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32838224 - 32838188
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32838224 ttagcaagtgtactaaaaatgtatcgaagtaataaaa 32838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4099301 - 4099361
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||    ||||||||||||||||  |||||||    
T  4099301 ttagcaagtgtactaaaaatgcatcgaagtaataaa----ataagttcgtatccacgaggactgt 4099361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 26712465 - 26712547
Alignment:
Q  119 gtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacta-taaaaaattggttttagaaaattagagagaag 201  Q
    ||||||||| ||||||| |||||||| ||||||||||| || | |||| || ||||| ||||||||||||||||  ||||||||    
T  26712465 gtgccctagacagttgagttgatttt-gtaacataaacaaaattaaaaatagtaaaagattggttttagaaaatctgagagaag 26712547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 26982203 - 26982285
Alignment:
Q  119 gtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacta-taaaaaattggttttagaaaattagagagaag 201  Q
    ||||||||| ||||||| |||||||| ||||||||||| || | |||| || ||||| ||||||||||||||||  ||||||||    
T  26982203 gtgccctagacagttgagttgatttt-gtaacataaacaaaattaaaaatagtaaaagattggttttagaaaatctgagagaag 26982285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 21335473 - 21335506
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||| |||||||||||||||||    
T  21335473 caagtgtactaaaaatgtatcgaagtaataaaat 21335506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 32228221 - 32228164
Alignment:
Q  24 tcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctacttg 80  Q
    |||||||||| ||||||||||  |||||||||||| | ||||||||||||| ||||||    
T  32228221 tcgaagtaatcaaatttataaacttcgtatccacatgaactgtttcaatttttacttg 32228164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 26338261 - 26338209
Alignment:
Q  83 aaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    |||||||||| ||| |||||||||||||||| | ||| |||||||||||||||    
T  26338261 aaaagcgttagaataaaggatgtattaaatttatgggttgccctaggcagttg 26338209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 33552471 - 33552418
Alignment:
Q  8 gtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  33552471 gtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 33552418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34832120 - 34832084
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  34832120 ttagcaagtgtactaaaaacgtatcgaagtaataaaa 34832084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 3e-53; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24605009 - 24605149
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  24605009 ttagcaagtgtactaaaaatatatcgaagtaataaaatctataagttcgtatccacaaggactgtttcaatttctacttggcaaaaacgttaaaataaag 24605108  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatt 142  Q
    |||||||||||||||  |||| ||||||||||||| ||||||    
T  24605109 gatgtattaaattcaatggtg-cctaggcagttgagttgatt 24605149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 7394632 - 7394765
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||  | ||||||| |||    
T  7394632 ttagcaagtgtactaaaagtatatcgaagtaataaaatttataagttcgtatccacatggactgtttcaatttctactcagcaaagacattaaaattaag 7394731  T
Q  101 gatgtattaaattcaggggtgccctaggcagttg 134  Q
    ||||| ||||| | | || |||||||||||||||    
T  7394732 gatgtgttaaaattatggttgccctaggcagttg 7394765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 26060850 - 26060653
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||||||||  ||||| | | ||| || | || |||| |  ||||| ||  ||    
T  26060850 ttagcaagtgtactaaaaatgtatcgaagtaataaaa---ataagttcgtatccacgaggactatgttaatctcaagttagcaataaggttaatatttag 26060754  T
Q  101 gatgtattaaattca--ggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagag 198  Q
     |||||| |||||||  || ||||||||||||| ||| ||||||||||||| ||||| ||| ||||||| || |||| |||||||||||||||| |||||    
T  26060753 aatgtataaaattcaatggtgtgccctaggcaggtgagttgatttttgtaatataaatgaaataaaaacaat-aaaagttggttttagaaaatttgagag 26060655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26703246 - 26703356
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||   ||||||||| |||    
T  26703246 ttagcaagtatactaaaaatgcatcaaagtaataaaatttataacttcgtatctacaggaaccgtttcaatttctacttggcaaggacgttaaaattaag 26703345  T
Q  101 gatgtattaaa 111  Q
    ||||| |||||    
T  26703346 gatgtgttaaa 26703356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 26062793 - 26062894
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    |||||||||||||||||| || ||||||||| ||||| |||| | ||||||| ||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  26062793 aaggatgtattaaattcaaggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagaga 26062892  T
Q  198 ga 199  Q
    ||    
T  26062893 ga 26062894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 37176955 - 37176863
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| | ||| |||||||| ||||||    
T  37176955 aagttcgtatccacaaggactgtttcaatttctactcggcaaaagctttaaaataaaggatgtattaaatttatgggttgccctagacagttg 37176863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 2542027 - 2541941
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt 184  Q
    ||||||||||||||||||  |||||||||||||||||| || ||| |||||||||||||| ||||||||| |||||| || ||||||    
T  2542027 aaggatgtattaaattcaatggtgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggtttt 2541941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 2437021 - 2436966
Alignment:
Q  9 tgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  2437021 tgtactaaaaatatatcgaagtaataaaatttataagttcatatccacaaggactg 2436966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 11649305 - 11649405
Alignment:
Q  98 aaggatgtattaaattca--ggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattaga 195  Q
    |||||||||| |||||||  || ||||||||||||||||| |||| |||||||| ||||||||| ||||||| || |||| |||||||||||||||| ||    
T  11649305 aaggatgtataaaattcaatggtgtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaat-aaaagttggttttagaaaatttga 11649403  T
Q  196 ga 197  Q
    ||    
T  11649404 ga 11649405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 54900122 - 54900045
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  54900122 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatccacatggactgtttcaacttctact 54900045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53094860 - 53094796
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||| || ||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  53094860 ttagcaagtgtattataaatgaatcgaagtaataaactttataagttcgtatccacagggactgt 53094796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 19859280 - 19859337
Alignment:
Q  5 caagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactg 64  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||||    
T  19859280 caagtgtactaaaactata--gaagtaataaaatttataagttcgtatccaaagggactg 19859337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 22884191 - 22884248
Alignment:
Q  23 atcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctactt 79  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| || |||||    
T  22884191 atcgaagtaataaaatttataagattcgtatccacagtgactgtttcaacttttactt 22884248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 22935855 - 22935912
Alignment:
Q  23 atcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctactt 79  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| || |||||    
T  22935855 atcgaagtaataaaatttataagattcgtatccacagtgactgtttcaacttttactt 22935912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12786469 - 12786409
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  12786469 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 12786409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 19864172 - 19864228
Alignment:
Q  4 gcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggac 62  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||| || ||||||    
T  19864172 gcaagtgtactaaaactat--cgaagtaataaaatttataagttcgtattcagagggac 19864228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3797589 - 3797650
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||  |||||||    
T  3797589 ttagcaagtgtactaaaaatgcatcgaagtaataaaat---taagttcgtatccacgaggactgt 3797650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15811910 - 15811971
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||  |||||||    
T  15811910 ttagcaagtgtactaaaaatgcatcgaagtaataaaat---taagttcgtatccacgaggactgt 15811971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19821061 - 19821010
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||    
T  19821061 ttagcaagtgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccac 19821010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40795359 - 40795321
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatt 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  40795359 ttagcaagtgtactaaaaatgtatcgaagtaataaaatt 40795321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 56199201 - 56199140
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||  |||||||    
T  56199201 ttagcaagtgtactaaaaatgcatcgaagtaataaaat---taagttcgtatccacgaggactgt 56199140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44165136 - 44165099
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  44165136 ttagcaagtgtactaaaaatgtatcgaagtaataaaat 44165099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 48415290 - 48415326
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48415290 ttagcaagtgtactaaaaacatatcgaagtaataaaa 48415326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3720707 - 3720647
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||| |||||||||||| |||||||||||||||    ||||||||||||||||  |||||||    
T  3720707 ttagcaaatgtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgt 3720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19827768 - 19827717
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    |||||||||||||||||||| | |||||||||||||    ||||||||||||||||    
T  19827768 ttagcaagtgtactaaaaatgtctcgaagtaataaa----ataagttcgtatccac 19827717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 56195874 - 56195836
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatt 39  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  56195874 ttagcaagtgtactaaaaatgcatcgaagtaataaaatt 56195836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5681773 - 5681736
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  5681773 ttagcaagtgtactaaaaatgcatcgaagtaataaaat 5681736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 12172095 - 12172031
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttt 183  Q
    |||||||||||||||||| |||| ||| |||||||||||  ||||||||| ||||| | |||||||    
T  12172095 ggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagatttggttt 12172031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15404856 - 15404908
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    ||||||||||||||||| ||  ||||||||||||||||   |||||||||||||||    
T  15404856 ttagcaagtgtactaaatatgcatcgaagtaataaaat---taagttcgtatccac 15404908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35510338 - 35510301
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  35510338 ttagcaagtgtactaaaaatgtatccaagtaataaaat 35510301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49271030 - 49270993
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  49271030 ttagtaagtgtactaaaaatatattgaagtaataaaat 49270993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 52006296 - 52006333
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  52006296 ttagcaagtgtactaaaaatgaatcgaagtaataaaat 52006333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18860117 - 18860059
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||  ||||||||||||||||    ||||||||||||||||  |||||||    
T  18860117 ttagcaagtgtactaaaa--atatcgaagtaataaa----ataagttcgtatccacgaggactgt 18860059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30720132 - 30719991
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |||    
T  30720132 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagtttgtatccacaggggctgtttcaatttctactcggcaaaagcgttaaaataaag 30720033  T
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatt 142  Q
    ||| |||||||||||  |||||| ||||||||||| ||||||    
T  30720032 gatatattaaattcaatggtgccttaggcagttgagttgatt 30719991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 23673446 - 23673552
Alignment:
Q  98 aaggatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagaga 197  Q
    |||||||||||||||||| || ||||||||||||||| ||||   ||||||| ||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  23673446 aaggatgtattaaattcaaggttgccctaggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagaga 23673545  T
Q  198 gaagtat 204  Q
    || ||||    
T  23673546 gatgtat 23673552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 36327067 - 36326964
Alignment:
Q  101 gatgtattaaattcaggggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaa 200  Q
    |||||||||||||||  | ||||||||| ||||  |||| | ||||||| ||||||| ||||||||| ||||||  |||||||||||||||||||||||     
T  36327067 gatgtattaaattcaaagttgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagagagat 36326968  T
Q  201 gtat 204  Q
    ||||    
T  36326967 gtat 36326964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35077261 - 35077184
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  35077261 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 35077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35080519 - 35080442
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  35080519 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctact 35080442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 13710169 - 13710109
Alignment:
Q  144 ttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaagtat 204  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||| |||||||||||    
T  13710169 ttgtaacataaacggattaaaaacaataaaagattggttttagaaaatttgagagaagtat 13710109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16881638 - 16881561
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||    
T  16881638 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatttacagggactgtttcaacttctact 16881561  T

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Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17039328 - 17039251
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||    
T  17039328 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatttacagggactgtttcaacttctact 17039251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43724039 - 43723979
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||  |||||||    
T  43724039 ttagcaagtgtactaaaaatatatcgaagtaataaa----ataagttcgtatccacgaggactgt 43723979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25138703 - 25138754
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||    
T  25138703 ttagcaagtgtactaaaaatatatcgaagtaataaa----ataagttcgtatccac 25138754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 31528513 - 31528427
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt--agaaaattagagagaagtat 204  Q
    |||||||||||||||||| |||||||  |||||||||||  ||||||||| ||||| ||||||||||  |||||||| |||||||||||    
T  31528513 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtat 31528427  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 40018099 - 40018017
Alignment:
Q  120 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggttttagaaaattagagagaagtat 204  Q
    |||||||||||||||| |||||||  |||||||||||| ||||||||| |||| | | |||||| |||||| | |||||||||||    
T  40018099 tgccctaggcagttgagttgattt--gtaacataaacggattaaaaacaataagagactggtttaagaaaaattgagagaagtat 40018017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6276932 - 6277002
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataa--gttcgtatccacagggactgtttcaa 70  Q
    ||||||||||||||||   |||||||||||||||||||||||||   |||||||||| ||||||||||||||    
T  6276932 ttagcaagtgtactaact-tatatcgaagtaataaaatttataaagattcgtatccatagggactgtttcaa 6277002  T

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Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 31626673 - 31626590
Alignment:
Q  118 ggtgccctaggcagttgaattgatttttgtaacat-aaacgaattaaaaactataaaaaattggttttagaaaattagagagaag 201  Q
    |||||||||||||||||| |||| ||||||||||| ||| ||||||||||  |||||  ||||||||||||||||  ||||||||    
T  31626673 ggtgccctaggcagttgagttga-ttttgtaacataaaaggaattaaaaataataaaggattggttttagaaaatctgagagaag 31626590  T

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Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33749764 - 33749695
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaa 70  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||| |||||| | ||||||||||    
T  33749764 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtgtccacatgtactgtttcaa 33749695  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5666856 - 5666819
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  5666856 ttagcaagtgtattaaaaatatatcgaagtaataaaat 5666819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31427316 - 31427368
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccac 56  Q
    ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||    
T  31427316 ttagcaagtgtactaaaaatgcatcgaagtaataaaat---taagttcgtatccac 31427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15470797 - 15470728
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttc 74  Q
    |||||||| ||||||||||| |||||||||||||||    ||||||||||||||||  ||||||| | ||||||    
T  15470797 ttagcaagggtactaaaaatgtatcgaagtaataaa----ataagttcgtatccacgaggactgtgttaatttc 15470728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25820619 - 25820688
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttc 74  Q
    ||||||||||||||||||||  ||||||||||||||    ||||||||||||||||  ||||||| | ||||||    
T  25820619 ttagcaagtgtactaaaaatgcatcgaagtaataaa----ataagttcgtatccacgaggactgtgttaatttc 25820688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36808218 - 36808279
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||| | ||| |||||||||||||||||||   |||||||||||||||  |||||||    
T  36808218 ttagcaagtgtatttaaactatatcgaagtaataaaat---taagttcgtatccacgaggactgt 36808279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 38132829 - 38132791
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccaca 57  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  38132829 tatatcgaagtaataaaatttataagattcgtatccaca 38132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45457492 - 45457431
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||| ||  ||||||||||||||||   |||||||||||||||  |||||||    
T  45457492 ttagcaagtgtactaaatatgcatcgaagtaataaaat---taagttcgtatccacgaggactgt 45457431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13971677 - 13971714
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  13971677 ttagcaagtgtactaaaaatgcatcgaagtaataaaat 13971714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38460592 - 38460629
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  38460592 ttagcaagtgtactaaaaatacatcgaagtagtaaaat 38460629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23259119 - 23259076
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag 45  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||    
T  23259119 ttagcaagtgtactaaac-tatatcgaaataataaaatttataag 23259076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31585708 - 31585744
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  31585708 ttagcaagtgtactaaaaacgtatcgaagtaataaaa 31585744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40781810 - 40781774
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  40781810 ttagcaagtgtactaaaaacgtatcgaagtaataaaa 40781774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43207662 - 43207698
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  43207662 ttagcaagtgtactaaaaacgtatcgaagtaataaaa 43207698  T

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Target: scaffold0043 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 13910 - 13818
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||    
T  13910 aagttcgtatccacagggactgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaattgatgggttgccctaggcagttg 13818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 11567 - 11475
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggcagttg 134  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| | ||| | |||||||||||||    
T  11567 aagttcgtatccacagggactgtttcaatttatactcggcaaaagcgttaaaataaaggatgtattaaatttatgggtttccctaggcagttg 11475  T

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Target: scaffold0045 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 90344 - 90432
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaattca-ggggtgccctaggca 130  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||| |||||||||||    
T  90344 aagttcgtatccacatggactgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatttatgggttgccctaggca 90432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 90117 - 90080
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  90117 ttagcaagtgtactaaaaatgcatcgaagtaataaaat 90080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 4577 - 4507
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaatt 113  Q
    ||||| ||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||    
T  4577 aagtttgtatccacagggactgtatcaatttctactcggaaaaagcgttaaaataaaggatgtattaaatt 4507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 42919 - 42849
Alignment:
Q  43 aagttcgtatccacagggactgtttcaatttctacttggcaaaagcgttaaaatgaaggatgtattaaatt 113  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||    
T  42919 aagttcgtattcacagggactgtttcaacttctactcggcaaaaacgttaaaataaaggatgtattaaatt 42849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4299 - 4376
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  4299 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtattcacagggactgtttcaacttctact 4376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1693 - 1755
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||||    
T  1693 ttagcaagtgtactaaaactat--cgaagtaataaaatttataagttcgtatccacaaggactgt 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 236 - 306
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaat 71  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||  || |||||||||    
T  236 ttagcaagtgtattaaaaatgcatcgaagtaataaaatttataagttcgtctccacaaagattgtttcaat 306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 638 - 700
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    |||||||||||||||||| |||  |||||| |||||||||| |||||||||||||||||||||||    
T  638 ttagcaagtgtactaaaactat--cgaagtgataaaatttacaagttcgtatccacagggactgt 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2047 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold2047
Description:

Target: scaffold2047; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 563 - 622
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||| ||||||||||||||||||| |||||||||||||||| |||||||| |||||||    
T  563 tatatcaaagtaataaaatttataagattcgtatccacagggattgtttcaacttctact 622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 36166 - 36107
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||| |||||||    
T  36166 tatatcgaagtaataaaatttataagatttgtatccacagggagtgtttcaacttctact 36107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 9982 - 9901
Alignment:
Q  122 ccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttt-agaaaattagagagaagtat 204  Q
    |||||||||||||| |||||||  |||||||||||  ||||||||| ||||| |||||||||| |||||||| |||||||||||    
T  9982 ccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaataattggtttttagaaaatt-gagagaagtat 9901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 157424 - 157365
Alignment:
Q  20 tatatcgaagtaataaaatttataag-ttcgtatccacagggactgtttcaatttctact 78  Q
    |||||||||||||||||||||||||| |||| ||| || ||||||||||||| |||||||    
T  157424 tatatcgaagtaataaaatttataagattcgaatctacggggactgtttcaacttctact 157365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 133 - 215
Alignment:
Q  120 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaaattggtttta-gaaaattagagagaagtat 204  Q
    |||||||||||||||| ||| |||||  ||||||||| |||||||||| ||||||  ||||||||| ||| |||||||||||||||    
T  133 tgccctaggcagttgagttggttttt--aacataaacaaattaaaaacaataaaag-ttggttttaagaatattagagagaagtat 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 2719 - 2797
Alignment:
Q  98 aaggatgtattaaattcaggggt-gccctaggcagttgaattgatttttgtaacataaacgaattaaaaactataaaaa 175  Q
    ||||||||||||||||||   || |||| ||| ||||| |||| |||||||||||| |||| |||||||||||||||||    
T  2719 aaggatgtattaaattcaattgttgcccaaggaagttggattggtttttgtaacatgaacggattaaaaactataaaaa 2797  T

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Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 14280 - 14235
Alignment:
Q  2 tagcaagtgtactaaaaatatatcgaagtaataaaatttataagtt 47  Q
    |||||||| |||||||||| |||||||||||||| |||||||||||    
T  14280 tagcaagtatactaaaaatgtatcgaagtaataagatttataagtt 14235  T

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Target: scaffold1063 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2844 - 2784
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||    ||||||||||||||||  |||||||    
T  2844 ttagcaagtgtactaaaaatgcatcgaagtaataaa----ataagttcgtatccacgaggactgt 2784  T

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Target: scaffold0080 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27468 - 27408
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgt 65  Q
    ||||||||||||||||||||  ||||||||||||||    ||||||||||||||||  |||||||    
T  27468 ttagcaagtgtactaaaaatgcatcgaagtaataaa----ataagttcgtatccacgaggactgt 27408  T

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Target: scaffold0757 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5709 - 5647
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgttt 67  Q
    |||||||||||||||||| |  ||||||||||||||    ||||||||||||||||  |||||||||    
T  5709 ttagcaagtgtactaaaactgcatcgaagtaataaa----ataagttcgtatccacgaggactgttt 5647  T

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Target: scaffold0520 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1314 - 1351
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaat 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  1314 ttagcaagtgtactaaaaatgcatcgaagtaataaaat 1351  T

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Target: scaffold0496 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 10153 - 10198
Alignment:
Q  12 actaaaaatatatcgaagtaataaaatttataagttcgtatccaca 57  Q
    |||||||||  |||||||||||||||||||||| ||||| ||||||    
T  10153 actaaaaatgcatcgaagtaataaaatttataaattcgtctccaca 10198  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 198501 - 198432
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttc 74  Q
    ||||||||||||||||||||  ||| ||||||||||    ||||||||||||||||  ||||||| | ||||||    
T  198501 ttagcaagtgtactaaaaatgcatcaaagtaataaa----ataagttcgtatccacgaggactgtgttaatttc 198432  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 99009 - 99044
Alignment:
Q  1 ttagcaagtgtactaaaaatatatcgaagtaataaaa 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  99009 ttagcaagtgtactaaaaat-tatcgaagtaataaaa 99044  T

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