View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14510_low_4 (Length: 270)
Name: NF14510_low_4
Description: NF14510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14510_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 8 - 270
Target Start/End: Original strand, 7108253 - 7108515
Alignment:
| Q |
8 |
agataatactcacttttaaaactactcgataaagaggagaaaatatgataagaaatacatctatcgttttttaaaactctagaccttaacatctttgccc |
107 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
7108253 |
agattatactcacttttaaaactactcgataaagaggagaaaatatgataagaaatacatctatcattttttaaaactctagaccttaacatctttgccc |
7108352 |
T |
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| Q |
108 |
gatccgtatcagaagacgccattctctcaacaaagcttaagattataagcttcattaagatggattagatatctaatacctaaccctccctcctctaatg |
207 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
7108353 |
aatccgtatcagaagacgccattctcccaacaaagcttaagattataagcttcattaagatggattagatatctaatacctaaccctccttcctctaatg |
7108452 |
T |
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| Q |
208 |
gcttacaaattttttccatgccacaatgactaatttcctcttctcaatgtccccactccaaat |
270 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7108453 |
gcttacaaatttttttcatgccacaatgactaatttcctcttctcaatgtccccactccaaat |
7108515 |
T |
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