View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14512_low_21 (Length: 223)
Name: NF14512_low_21
Description: NF14512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14512_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 40260540 - 40260729
Alignment:
| Q |
19 |
catacacagtccaatttttcacatttcacggccgaatgacatctataaacagaaacaaattcatatgatcacacaccttattgataaatattaatgcacc |
118 |
Q |
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| T |
40260540 |
catacacagtccaatttttcacatttcacggctgaatgacatctacaaacagaaacaaattcatatgatcacacaccttattgataaatattaatgcacc |
40260639 |
T |
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| Q |
119 |
ttttaattttggggtgacatttttctcattatgttcgataaactgcacatcatcctagtattacatatagctacaatacaacaatattct |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
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| T |
40260640 |
ttttaattttggggtgacatttttctcattatgttcgataaactgcacatcatcctagtattacatatagctacaatacaatattattct |
40260729 |
T |
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