View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14513_high_9 (Length: 213)
Name: NF14513_high_9
Description: NF14513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14513_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 3622529 - 3622714
Alignment:
| Q |
19 |
ttatcgacttgacgctgacgtacatagcaattcaaaagagcaccgtgtgtcttttcatttctttctatatccttcaagctattaaaataggtttctgcag |
118 |
Q |
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| T |
3622529 |
ttatcgacttgacgctgacgtacatagcaattcaaaagagcaccgtgtgtcttctcatttctttctatatccttcaagctattaaaataggtttctgcag |
3622628 |
T |
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| Q |
119 |
cataaaaaccgtgaacccttccagtaagatccaaatgcaccgcgtgttcaactggagaaaatatgcacacaccattcttattcatc |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
3622629 |
cataaaaaccgtgaacccttccagtaagatccaaatgcaccgcgtgttcaactggagaaaatatgcacacaccaatcttattcatc |
3622714 |
T |
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