View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14514_low_8 (Length: 268)
Name: NF14514_low_8
Description: NF14514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14514_low_8 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 4123486 - 4123743
Alignment:
| Q |
11 |
catcatcactatactccaacataaaatcgtcttccatttcctcgccctcgtgaaaaaacaaaacatcaccaaaatcatccattgttgtcgatgttgaatt |
110 |
Q |
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| T |
4123486 |
catcatcactatactccaacataaaatcgtcttccatttcctcgccctcgtgaaaaaacaacacatcaccaaaatcatccattgttgtggatgttgaatt |
4123585 |
T |
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| Q |
111 |
tgttcttcttctatctctattcctaggaatcaaatccatatccataacctcaccattctcaacagcattccacggcacccacaaatcagcatgcctccct |
210 |
Q |
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| T |
4123586 |
tgttcttcttctatctctattcctaggaatcaaatccatatccataacctcaccattctcaacagcattccacggcacccacaaatcagcatgcctccct |
4123685 |
T |
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| Q |
211 |
aaagccctatcaacatccccaacaacaacagtacctaaattagcctctctagccttcc |
268 |
Q |
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| T |
4123686 |
aaagccctatcaacatccccaacaacaacagtacctaaattagcctctctagccttcc |
4123743 |
T |
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