View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14515_high_2 (Length: 433)

Name: NF14515_high_2
Description: NF14515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14515_high_2
NF14515_high_2
[»] chr3 (44 HSPs)
chr3 (16-421)||(7476902-7477307)
chr3 (16-421)||(7493592-7493997)
chr3 (215-421)||(31284306-31284513)
chr3 (215-416)||(25248020-25248222)
chr3 (230-421)||(41472225-41472416)
chr3 (249-415)||(8067223-8067390)
chr3 (227-371)||(12820565-12820710)
chr3 (305-416)||(25230283-25230394)
chr3 (305-416)||(25237870-25237981)
chr3 (216-408)||(41473907-41474100)
chr3 (305-421)||(28561746-28561862)
chr3 (305-416)||(30529687-30529798)
chr3 (240-421)||(27187360-27187542)
chr3 (305-421)||(14813949-14814065)
chr3 (305-421)||(16811381-16811497)
chr3 (216-339)||(32388843-32388967)
chr3 (305-421)||(39653164-39653280)
chr3 (305-416)||(20885152-20885263)
chr3 (305-408)||(25230748-25230851)
chr3 (305-408)||(25238335-25238438)
chr3 (305-416)||(25239112-25239223)
chr3 (313-421)||(11180064-11180172)
chr3 (313-416)||(32227256-32227359)
chr3 (305-416)||(39640937-39641048)
chr3 (336-422)||(32386763-32386849)
chr3 (313-416)||(50347754-50347857)
chr3 (313-422)||(13150128-13150237)
chr3 (305-421)||(16810925-16811041)
chr3 (305-421)||(25803034-25803150)
chr3 (305-416)||(32796970-32797081)
chr3 (305-415)||(14820154-14820264)
chr3 (348-421)||(13150584-13150657)
chr3 (344-421)||(29224363-29224440)
chr3 (341-421)||(25802578-25802658)
chr3 (341-421)||(32227536-32227616)
chr3 (305-416)||(37045035-37045146)
chr3 (345-416)||(25238719-25238790)
chr3 (357-416)||(4067395-4067454)
chr3 (316-392)||(31104019-31104095)
chr3 (305-408)||(2911095-2911198)
chr3 (352-416)||(26310024-26310088)
chr3 (239-274)||(29224233-29224268)
chr3 (239-280)||(33466904-33466945)
chr3 (308-393)||(45047071-45047156)
[»] chr7 (46 HSPs)
chr7 (214-421)||(9124867-9125075)
chr7 (216-414)||(11517426-11517624)
chr7 (215-415)||(5406624-5406824)
chr7 (216-421)||(13125166-13125372)
chr7 (216-408)||(42515002-42515195)
chr7 (216-421)||(18833196-18833402)
chr7 (230-393)||(13124759-13124923)
chr7 (251-421)||(2941787-2941958)
chr7 (264-415)||(25182320-25182471)
chr7 (305-421)||(42515544-42515660)
chr7 (305-416)||(2193256-2193367)
chr7 (305-416)||(35474156-35474267)
chr7 (305-416)||(6747633-6747744)
chr7 (305-421)||(6719104-6719220)
chr7 (305-421)||(28495854-28495970)
chr7 (305-421)||(34405621-34405737)
chr7 (313-421)||(36422260-36422368)
chr7 (305-421)||(2189144-2189260)
chr7 (305-416)||(2611687-2611798)
chr7 (305-408)||(36015454-36015557)
chr7 (315-421)||(29357486-29357592)
chr7 (305-421)||(46425741-46425857)
chr7 (305-408)||(679817-679919)
chr7 (305-416)||(28495643-28495754)
chr7 (305-405)||(26957603-26957703)
chr7 (305-421)||(31743854-31743970)
chr7 (305-416)||(29039055-29039166)
chr7 (246-421)||(31406614-31406790)
chr7 (305-415)||(43233413-43233523)
chr7 (305-422)||(22529264-22529381)
chr7 (305-422)||(35527150-35527267)
chr7 (349-421)||(2465777-2465849)
chr7 (341-421)||(2465960-2466040)
chr7 (334-408)||(33316757-33316831)
chr7 (336-421)||(26421790-26421875)
chr7 (335-416)||(6585638-6585721)
chr7 (305-416)||(9623208-9623319)
chr7 (308-416)||(1628719-1628824)
chr7 (307-393)||(11372453-11372539)
chr7 (336-392)||(16811905-16811961)
chr7 (336-408)||(37672191-37672263)
chr7 (341-408)||(20966087-20966154)
chr7 (337-402)||(2490071-2490136)
chr7 (355-408)||(26421348-26421401)
chr7 (307-381)||(11372901-11372975)
chr7 (354-416)||(16192368-16192430)
[»] chr5 (40 HSPs)
chr5 (214-421)||(22556444-22556652)
chr5 (216-421)||(2473869-2474075)
chr5 (216-421)||(2474315-2474521)
chr5 (216-421)||(3887087-3887293)
chr5 (231-421)||(22556894-22557085)
chr5 (216-421)||(3886631-3886837)
chr5 (228-416)||(1821828-1822017)
chr5 (305-421)||(8642064-8642180)
chr5 (216-421)||(188990-189184)
chr5 (305-421)||(21886176-21886292)
chr5 (305-421)||(34867790-34867906)
chr5 (305-416)||(10926981-10927092)
chr5 (305-416)||(10927438-10927549)
chr5 (239-381)||(22975080-22975223)
chr5 (246-408)||(2058699-2058862)
chr5 (305-416)||(17445490-17445601)
chr5 (305-416)||(27646870-27646981)
chr5 (305-421)||(34371612-34371728)
chr5 (305-408)||(20039517-20039620)
chr5 (216-421)||(30719835-30720041)
chr5 (313-421)||(2193824-2193932)
chr5 (307-407)||(16370752-16370852)
chr5 (305-421)||(42788676-42788792)
chr5 (305-416)||(39146939-39147050)
chr5 (310-408)||(11160724-11160822)
chr5 (269-421)||(30684586-30684739)
chr5 (305-421)||(8391352-8391467)
chr5 (305-421)||(34372068-34372184)
chr5 (319-421)||(18750226-18750328)
chr5 (305-416)||(24182280-24182391)
chr5 (305-421)||(18304431-18304547)
chr5 (305-416)||(15513047-15513159)
chr5 (275-416)||(4658028-4658167)
chr5 (279-416)||(43356655-43356790)
chr5 (305-408)||(5066934-5067037)
chr5 (334-415)||(32574694-32574774)
chr5 (305-393)||(4102812-4102895)
chr5 (305-405)||(42429146-42429245)
chr5 (315-416)||(29680142-29680236)
chr5 (306-339)||(11757354-11757387)
[»] chr6 (48 HSPs)
chr6 (216-421)||(13492699-13492905)
chr6 (216-421)||(16519879-16520084)
chr6 (216-421)||(9351973-9352178)
chr6 (228-409)||(17731155-17731337)
chr6 (249-421)||(7911821-7911994)
chr6 (216-421)||(13191543-13191749)
chr6 (231-421)||(7912235-7912426)
chr6 (305-422)||(20896717-20896834)
chr6 (265-393)||(9440486-9440614)
chr6 (305-421)||(17027561-17027677)
chr6 (283-421)||(9440339-9440477)
chr6 (313-415)||(2720600-2720702)
chr6 (279-415)||(32292859-32292995)
chr6 (305-416)||(20126217-20126328)
chr6 (305-421)||(6330942-6331058)
chr6 (305-421)||(20850321-20850437)
chr6 (313-408)||(14771762-14771857)
chr6 (269-422)||(9440886-9441037)
chr6 (305-421)||(23986347-23986463)
chr6 (305-421)||(27334161-27334277)
chr6 (305-421)||(27394901-27395017)
chr6 (305-416)||(3652486-3652597)
chr6 (337-416)||(21312003-21312082)
chr6 (305-415)||(31821728-31821838)
chr6 (305-421)||(2681246-2681362)
chr6 (307-415)||(28065874-28065982)
chr6 (305-416)||(17850918-17851029)
chr6 (305-416)||(17851374-17851485)
chr6 (305-416)||(21311515-21311626)
chr6 (305-421)||(15929582-15929698)
chr6 (341-421)||(20735731-20735811)
chr6 (313-421)||(23776449-23776557)
chr6 (341-416)||(11062321-11062396)
chr6 (336-422)||(2890868-2890954)
chr6 (240-363)||(13490055-13490179)
chr6 (307-377)||(3652981-3653051)
chr6 (316-390)||(9441061-9441135)
chr6 (305-413)||(28582964-28583071)
chr6 (344-415)||(3885123-3885194)
chr6 (340-399)||(20732613-20732672)
chr6 (336-407)||(33775048-33775119)
chr6 (339-421)||(1991587-1991669)
chr6 (305-416)||(12194330-12194439)
chr6 (340-402)||(10964339-10964401)
chr6 (334-404)||(30729886-30729956)
chr6 (342-415)||(17205376-17205449)
chr6 (341-421)||(15929235-15929315)
chr6 (366-421)||(13492393-13492448)
[»] chr2 (38 HSPs)
chr2 (216-421)||(30966144-30966350)
chr2 (216-421)||(30966600-30966806)
chr2 (216-415)||(24818236-24818436)
chr2 (216-421)||(29259650-29259856)
chr2 (215-421)||(5399847-5400054)
chr2 (227-416)||(1953078-1953266)
chr2 (305-421)||(25338027-25338143)
chr2 (305-416)||(33174958-33175069)
chr2 (305-421)||(41754289-41754405)
chr2 (305-416)||(18098913-18099024)
chr2 (305-421)||(33174505-33174619)
chr2 (305-421)||(29804682-29804798)
chr2 (309-416)||(15619902-15620009)
chr2 (305-416)||(16379393-16379504)
chr2 (239-408)||(82953-83120)
chr2 (305-415)||(18447954-18448064)
chr2 (313-421)||(8256534-8256642)
chr2 (307-408)||(20502023-20502126)
chr2 (305-416)||(1912525-1912636)
chr2 (306-416)||(16378938-16379048)
chr2 (305-414)||(25434093-25434202)
chr2 (305-421)||(11388189-11388303)
chr2 (305-416)||(1707042-1707152)
chr2 (305-416)||(27882961-27883072)
chr2 (314-416)||(30963755-30963857)
chr2 (341-421)||(33771037-33771117)
chr2 (305-408)||(38898955-38899058)
chr2 (307-415)||(30963299-30963407)
chr2 (341-416)||(13191010-13191085)
chr2 (336-421)||(11394566-11394650)
chr2 (231-408)||(30961926-30962111)
chr2 (305-408)||(16541985-16542088)
chr2 (356-416)||(36924457-36924519)
chr2 (315-416)||(8073902-8074003)
chr2 (356-408)||(8181394-8181446)
chr2 (352-416)||(15639781-15639845)
chr2 (41-135)||(35494341-35494434)
chr2 (315-408)||(9909102-9909195)
[»] scaffold0007 (1 HSPs)
scaffold0007 (216-416)||(142309-142510)
[»] chr8 (44 HSPs)
chr8 (216-421)||(25147446-25147652)
chr8 (216-422)||(27819275-27819481)
chr8 (216-421)||(34308509-34308715)
chr8 (215-421)||(34308965-34309176)
chr8 (216-415)||(22705090-22705282)
chr8 (227-421)||(25144693-25144888)
chr8 (216-421)||(12100602-12100807)
chr8 (215-422)||(21316138-21316346)
chr8 (305-421)||(41659135-41659251)
chr8 (305-421)||(10844883-10844999)
chr8 (305-421)||(27925899-27926015)
chr8 (231-421)||(25147892-25148083)
chr8 (315-421)||(27021909-27022015)
chr8 (316-421)||(28375084-28375189)
chr8 (300-408)||(2044053-2044161)
chr8 (305-421)||(22026379-22026495)
chr8 (305-408)||(8080385-8080488)
chr8 (304-421)||(22548579-22548696)
chr8 (305-421)||(22549025-22549141)
chr8 (310-421)||(17103086-17103197)
chr8 (308-421)||(10844645-10844758)
chr8 (305-416)||(32292397-32292508)
chr8 (305-415)||(27022374-27022484)
chr8 (313-421)||(12827284-12827392)
chr8 (305-408)||(6464953-6465056)
chr8 (305-416)||(28453338-28453449)
chr8 (305-416)||(22840564-22840675)
chr8 (305-408)||(33852301-33852404)
chr8 (216-361)||(9250913-9251057)
chr8 (305-421)||(30334938-30335054)
chr8 (305-416)||(15567591-15567702)
chr8 (338-408)||(1297040-1297110)
chr8 (338-408)||(41913003-41913073)
chr8 (308-416)||(3745104-3745212)
chr8 (305-418)||(17429501-17429613)
chr8 (334-405)||(3744667-3744738)
chr8 (305-402)||(29971450-29971547)
chr8 (343-408)||(36968438-36968503)
chr8 (345-421)||(15819045-15819121)
chr8 (216-283)||(31283365-31283432)
chr8 (343-416)||(30527517-30527589)
chr8 (279-415)||(6466686-6466820)
chr8 (305-369)||(25307765-25307829)
chr8 (356-415)||(15568041-15568100)
[»] chr4 (61 HSPs)
chr4 (216-421)||(23350307-23350513)
chr4 (216-408)||(35871538-35871731)
chr4 (216-421)||(49998546-49998752)
chr4 (217-422)||(27578932-27579137)
chr4 (228-421)||(44471349-44471543)
chr4 (216-415)||(13266002-13266196)
chr4 (216-421)||(27578481-27578683)
chr4 (216-421)||(15306115-15306326)
chr4 (240-416)||(44470903-44471080)
chr4 (305-421)||(12692023-12692139)
chr4 (305-421)||(50398562-50398678)
chr4 (305-416)||(9423887-9423998)
chr4 (251-416)||(14572179-14572345)
chr4 (249-422)||(14571744-14571918)
chr4 (305-421)||(4127913-4128029)
chr4 (305-421)||(24629457-24629573)
chr4 (305-421)||(50399017-50399133)
chr4 (305-421)||(51331305-51331421)
chr4 (305-416)||(14351795-14351906)
chr4 (305-416)||(21067282-21067393)
chr4 (305-408)||(29628704-29628807)
chr4 (305-421)||(4127461-4127577)
chr4 (305-416)||(23942818-23942929)
chr4 (215-422)||(41869829-41870035)
chr4 (305-421)||(31817876-31817992)
chr4 (305-416)||(1645778-1645889)
chr4 (305-416)||(3169206-3169317)
chr4 (279-421)||(8467824-8467964)
chr4 (305-422)||(24629000-24629120)
chr4 (336-412)||(21067765-21067841)
chr4 (305-416)||(21220360-21220471)
chr4 (305-421)||(31817422-31817538)
chr4 (305-393)||(53854859-53854947)
chr4 (338-421)||(27029310-27029393)
chr4 (305-416)||(53996144-53996255)
chr4 (279-408)||(17028849-17028977)
chr4 (341-421)||(7678646-7678726)
chr4 (316-416)||(43928992-43929092)
chr4 (337-415)||(27026535-27026613)
chr4 (307-420)||(52048691-52048804)
chr4 (305-421)||(1464147-1464263)
chr4 (312-392)||(2499647-2499727)
chr4 (309-408)||(17029334-17029433)
chr4 (354-421)||(17628560-17628627)
chr4 (283-398)||(17628946-17629061)
chr4 (307-408)||(24271587-24271690)
chr4 (305-416)||(13613926-13614037)
chr4 (354-416)||(23943271-23943333)
chr4 (343-412)||(53391925-53391994)
chr4 (309-404)||(17506389-17506484)
chr4 (341-416)||(23976248-23976323)
chr4 (338-416)||(4185748-4185826)
chr4 (314-416)||(4186176-4186278)
chr4 (365-415)||(20306191-20306241)
chr4 (276-352)||(33987164-33987239)
chr4 (322-378)||(34801394-34801450)
chr4 (343-415)||(42838661-42838733)
chr4 (305-368)||(2682707-2682770)
chr4 (371-421)||(50814849-50814899)
chr4 (307-392)||(26200338-26200425)
chr4 (305-357)||(35477803-35477855)
[»] scaffold0040 (2 HSPs)
scaffold0040 (216-421)||(2240-2446)
scaffold0040 (216-268)||(2554-2606)
[»] scaffold0018 (1 HSPs)
scaffold0018 (216-415)||(10210-10410)
[»] chr1 (40 HSPs)
chr1 (230-421)||(20061221-20061413)
chr1 (218-416)||(35760949-35761148)
chr1 (216-421)||(35759638-35759844)
chr1 (249-421)||(46693765-46693940)
chr1 (216-416)||(2328225-2328426)
chr1 (305-421)||(20054110-20054226)
chr1 (305-421)||(20054566-20054682)
chr1 (305-421)||(20055022-20055138)
chr1 (305-421)||(20055478-20055594)
chr1 (305-421)||(20055934-20056050)
chr1 (305-421)||(20056390-20056506)
chr1 (305-421)||(20057293-20057409)
chr1 (305-421)||(38340906-38341022)
chr1 (305-421)||(43057553-43057669)
chr1 (227-408)||(23180652-23180833)
chr1 (305-421)||(20845691-20845807)
chr1 (305-421)||(50002737-50002853)
chr1 (305-421)||(20057749-20057865)
chr1 (279-422)||(16907209-16907351)
chr1 (305-421)||(50002315-50002431)
chr1 (305-416)||(30872985-30873096)
chr1 (305-421)||(2634924-2635040)
chr1 (305-421)||(16451963-16452079)
chr1 (305-421)||(16461116-16461232)
chr1 (305-421)||(31822693-31822809)
chr1 (305-421)||(43057095-43057210)
chr1 (305-422)||(50003104-50003221)
chr1 (305-421)||(52250206-52250322)
chr1 (341-421)||(20056846-20056926)
chr1 (305-408)||(12883524-12883627)
chr1 (315-415)||(51372910-51373010)
chr1 (349-415)||(10820636-10820702)
chr1 (360-421)||(20060370-20060431)
chr1 (305-408)||(7548091-7548194)
chr1 (305-421)||(2634465-2634582)
chr1 (341-421)||(12728027-12728108)
chr1 (42-141)||(27795950-27796048)
chr1 (316-392)||(842992-843068)
chr1 (341-405)||(2739558-2739622)
chr1 (343-415)||(16410759-16410831)
[»] scaffold0020 (1 HSPs)
scaffold0020 (216-421)||(107493-107699)
[»] scaffold0022 (2 HSPs)
scaffold0022 (215-421)||(162708-162915)
scaffold0022 (268-415)||(69851-69998)
[»] scaffold0024 (1 HSPs)
scaffold0024 (216-421)||(105630-105836)
[»] scaffold0322 (2 HSPs)
scaffold0322 (305-421)||(18966-19082)
scaffold0322 (234-369)||(18203-18339)
[»] scaffold0499 (1 HSPs)
scaffold0499 (305-421)||(2081-2197)
[»] scaffold0005 (2 HSPs)
scaffold0005 (251-416)||(245031-245197)
scaffold0005 (249-422)||(245458-245632)
[»] scaffold0088 (1 HSPs)
scaffold0088 (305-416)||(23673-23784)
[»] scaffold0333 (2 HSPs)
scaffold0333 (305-421)||(4561-4677)
scaffold0333 (305-421)||(5016-5137)
[»] scaffold0243 (1 HSPs)
scaffold0243 (305-421)||(1220-1336)
[»] scaffold0168 (1 HSPs)
scaffold0168 (305-421)||(2742-2858)
[»] scaffold0047 (2 HSPs)
scaffold0047 (305-415)||(18170-18280)
scaffold0047 (309-404)||(17645-17740)
[»] scaffold0664 (1 HSPs)
scaffold0664 (305-416)||(4017-4128)
[»] scaffold0002 (1 HSPs)
scaffold0002 (313-422)||(154765-154874)
[»] scaffold0391 (1 HSPs)
scaffold0391 (305-413)||(14741-14849)
[»] scaffold0036 (2 HSPs)
scaffold0036 (309-416)||(26074-26181)
scaffold0036 (309-404)||(16038-16135)
[»] scaffold0557 (1 HSPs)
scaffold0557 (354-416)||(2154-2216)
[»] scaffold0101 (1 HSPs)
scaffold0101 (305-418)||(45387-45499)
[»] scaffold1126 (1 HSPs)
scaffold1126 (337-386)||(981-1030)


Alignment Details
Target: chr3 (Bit Score: 374; Significance: 0; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 16 - 421
Target Start/End: Original strand, 7476902 - 7477307
Alignment:
Q  16 atttttgttgtttaaacattaaaacaattctacttgatcaacaactaaaaattgctaaactacattttcaaaccctcaaccaattctacttgatcgacaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7476902 atttttgttgtttaaacattaaaacaattctacttgatcaacaactaaaaattgctaaactacattttcaaaccctcaaccaattctacttgatcgacaa 7477001  T
Q  116 ctaaaaactccaaccttcaacaaaaattaatgagaggaaatttaacacttattgggtttgagaagaaatttgcaacaaatacaatgtctttggcgttagt 215  Q
    |||||||||| ||||||||||||||||||||     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7477002 ctaaaaactctaaccttcaacaaaaattaattttttgtaatttaacacttattgggtttgagaagaaatttgcaacaaatacaatgtctttggcgttagt 7477101  T
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7477102 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 7477201  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7477202 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 7477301  T
Q  416 catttc 421  Q
    | ||||    
T  7477302 cttttc 7477307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 16 - 421
Target Start/End: Original strand, 7493592 - 7493997
Alignment:
Q  16 atttttgttgtttaaacattaaaacaattctacttgatcaacaactaaaaattgctaaactacattttcaaaccctcaaccaattctacttgatcgacaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7493592 atttttgttgtttaaacattaaaacaattctacttgatcaacaactaaaaattgctaaactacattttcaaaccctaaaccaattctacttgatcgacaa 7493691  T
Q  116 ctaaaaactccaaccttcaacaaaaattaa-tgagaggaaatttaacacttattgggtttgagaagaaatttgcaacaaatacaatgtctttggcgttag 214  Q
    |||||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7493692 ctaaaaactctaaccttcaacaaaaattaaatgagaggaaatt-aacacttatcgggtttgagaagaaatttgcaacaaatacaatgtctttggcgttag 7493790  T
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcg 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||||||||    
T  7493791 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccggcttctggcggcttctaggcaaaacataatcacatcg 7493890  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7493891 gaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatct 7493990  T
Q  415 tcatttc 421  Q
    || ||||    
T  7493991 tcttttc 7493997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 215 - 421
Target Start/End: Complemental strand, 31284513 - 31284306
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatc 313  Q
    ||||||||||| ||||| ||||| |||||  || |||||||||||||| |||||||||||||||||||||||| | |||||||||||||  |||||||||    
T  31284513 ttgtaacgcctccgcttagtgggcatgtatcgcccgaggctgatgagggcggggagtggtccgactcctggcatgcttctaggcaaaactgaatcacatc 31284414  T
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatc 413  Q
    ||||||||||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  31284413 ggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 31284314  T
Q  414 ttcatttc 421  Q
    ||| ||||    
T  31284313 ttcttttc 31284306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 215 - 416
Target Start/End: Original strand, 25248020 - 25248222
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatc 313  Q
    ||||||||||| |||||| |||||  |||| || ||||||| ||||||  ||||||||||| | ||||||||| | || ||||||||||  |||||||||    
T  25248020 ttgtaacgcctccgcttgatgggttagtaacgcccgaggctaatgagggtggggagtggtcaggctcctggcatgcttataggcaaaactgaatcacatc 25248119  T
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatc 413  Q
    |||||||||||||| |||| | |||||||||||| |||||||||||| |||||| | ||||||||||| ||||||||||| |||||||||||||| ||||    
T  25248120 ggaatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatc 25248219  T
Q  414 ttc 416  Q
    |||    
T  25248220 ttc 25248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 230 - 421
Target Start/End: Original strand, 41472225 - 41472416
Alignment:
Q  230 ttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatc 328  Q
    |||||||| |||||| || | ||||||| ||||  || |||||||||| ||||||||| |  ||||||||| ||  ||||||||||||||||||||||||    
T  41472225 ttggtgggcatgtaacgcccaaggctgaagagggtggtgagtggtccggctcctggcatgcatctaggcaagactgaatcacatcggaatgagagggatc 41472324  T
Q  329 ctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    || | ||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  41472325 ctgaggtcgtacaggtatgagactgcatggttgaaggaa-gcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttc 41472416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 249 - 415
Target Start/End: Original strand, 8067223 - 8067390
Alignment:
Q  249 cgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatg 347  Q
    |||||||||||||| |||||||||||||| ||||||||| | ||||| ||||||   |||||||||||||||||||||| ||| | | ||||||||||||    
T  8067223 cgaggctgatgagggcggggagtggtccggctcctggcatgcttctaagcaaaattgaatcacatcggaatgagagggaccctgaggccgtgcaggtatg 8067322  T
Q  348 agactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
     || ||||||||||||||  |||||||||||||| ||| ||||||| |||||||||||||| ||||||    
T  8067323 ggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaacaagatgcatctt 8067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 227 - 371
Target Start/End: Original strand, 12820565 - 12820710
Alignment:
Q  227 cgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagaggg 325  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||| ||| | |||||||||||||  |||||||||||||||||||||    
T  12820565 cgcttggtgggcatgtaacgctcgaggctgatgagggcggggagtggtccggctccttgcatgcttctaggcaaaactgaatcacatcggaatgagaggg 12820664  T
Q  326 atcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggct 371  Q
    || |||| | ||| |||||||| |||||||||||||||| ||||||    
T  12820665 attctaaggccgtacaggtatgggactgcatggttgaagaaaggct 12820710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 25230394 - 25230283
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||| |||||||||||| | |||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  25230394 aatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaaca 25230295  T
Q  405 agatacatcttc 416  Q
    ||||||||||||    
T  25230294 agatacatcttc 25230283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 25237981 - 25237870
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||| |||||||||||| | |||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  25237981 aatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaaca 25237882  T
Q  405 agatacatcttc 416  Q
    ||||||||||||    
T  25237881 agatacatcttc 25237870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 408
Target Start/End: Original strand, 41473907 - 41474100
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| |||||| |||| |||||| ||  ||||||||||||| |||||||||||||| ||||| ||| | |||| ||||| ||  ||||||||||    
T  41473907 tgtaacgcctccgcttgatgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctagcatgcttctcggcaagactgaatcacatcg 41474006  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
     ||||||||||||| | | ||||| |||||||| ||||| |||||| ||||||| |||||||||||| |||| |||| | ||||||||||||||    
T  41474007 aaatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaacaagat 41474100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 28561746 - 28561862
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  28561746 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 28561845  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  28561846 agatgcatcttcttttc 28561862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 30529687 - 30529798
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | |  ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  30529687 aatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaaca 30529786  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  30529787 agatgcatcttc 30529798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 421
Target Start/End: Complemental strand, 27187542 - 27187360
Alignment:
Q  240 tgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgt 338  Q
    ||||| || |||||||||||||| |||  ||||||||| ||||| ||| | ||||||| ||||   |||||||| ||||||||||||||||| | |  ||    
T  27187542 tgtaacgcccgaggctgatgagggcggcaagtggtccggctcctagcaagcttctaggaaaaattgaatcacattggaatgagagggatcctgaggctgt 27187443  T
Q  339 gcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||| ||||| |||||||||||| || ||||||||||||||||| ||||||||||| |||||||  ||||| ||||||| ||||    
T  27187442 gcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcactaagatgcatcttcttttc 27187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 14813949 - 14814065
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||||| |    
T  14813949 aatcacaccggaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaata 14814048  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  14814049 agatgcatcttcttttc 14814065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 16811381 - 16811497
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | |||| |||| || |||| |||||||||||||||||||||||||||| || |||||||| ||| ||||||    
T  16811381 aatcacatcggaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaaca 16811480  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  16811481 agatgcatcttcttttc 16811497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 339
Target Start/End: Complemental strand, 32388967 - 32388843
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||| ||||| |||||| || |||||||||||||| |||||||||||||| ||||||||| | ||||||||||||   ||||||||||    
T  32388967 tgtaacgcctccgcttagtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaattgaatcacatcg 32388868  T
Q  315 gaatgagagggatcctaaagtcgtg 339  Q
    |||||||||||||||| | ||||||    
T  32388867 gaatgagagggatcctgaggtcgtg 32388843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 39653164 - 39653280
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||    
T  39653164 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaaca 39653263  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  39653264 agatgcatcttcttttc 39653280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 20885263 - 20885152
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||| ||||||||||||| | | |||||| ||||||| |||| ||||||||||||||| |||||||||||| |||| |||||| ||||||||||    
T  20885263 aatcacatcgcaatgagagggatcttgaggtcgtgtaggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaaca 20885164  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  20885163 agatgcatcttc 20885152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 25230851 - 25230748
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| ||||||||||||||||| | | | || |||||||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  25230851 aatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaaca 25230752  T
Q  405 agat 408  Q
    ||||    
T  25230751 agat 25230748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 25238438 - 25238335
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| ||||||||||||||||| | | | || |||||||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  25238438 aatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaaca 25238339  T
Q  405 agat 408  Q
    ||||    
T  25238338 agat 25238335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 25239223 - 25239112
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||| ||||||||||| || | |||||| ||||||| ||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  25239223 aatcacaccggtatgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaaca 25239124  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  25239123 agatgcatcttc 25239112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 421
Target Start/End: Complemental strand, 11180172 - 11180064
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||||| | | | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  11180172 cggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 11180073  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  11180072 cttcttttc 11180064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 416
Target Start/End: Complemental strand, 32227359 - 32227256
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||||||| | | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||||| |||    
T  32227359 cggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcat 32227260  T
Q  413 cttc 416  Q
    ||||    
T  32227259 cttc 32227256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 39640937 - 39641048
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| ||||||||| |||||| | | |||| |||||||||||| ||||||||||||||| ||||||||| || ||||||||||| |||||||| |    
T  39640937 aatcacatcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaata 39641036  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  39641037 agatgcatcttc 39641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 32386849 - 32386763
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttca 422  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||| |||||    
T  32386849 cgtgcaggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttca 32386763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 416
Target Start/End: Original strand, 50347754 - 50347857
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||||| | | | || | |||||||||| | |||||||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  50347754 cggaatgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 50347853  T
Q  413 cttc 416  Q
    ||||    
T  50347854 cttc 50347857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 313 - 422
Target Start/End: Complemental strand, 13150237 - 13150128
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    ||||||||||||| |||| | | | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| | |||||||||||| |||    
T  13150237 cggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcat 13150138  T
Q  413 cttcatttca 422  Q
    |||| |||||    
T  13150137 cttcttttca 13150128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 16810925 - 16811041
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | | |||| || |||| |||||||||||||| |||||||||||||||||| ||  ||||||  |||||| |||    
T  16810925 aatcacatcggaatgagagggatcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctaca 16811024  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  16811025 agatgcatcttcttttc 16811041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 25803150 - 25803034
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| |||||||| |||||| |||||| |||||| ||||||| |||||||||||||||| ||| ||| |||||||| ||||||||||| ||||  ||||    
T  25803150 aatcatatcggaataagagggttcctaatgtcgtgtaggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataaaaaca 25803051  T
Q  405 agatacatcttcatttc 421  Q
    ||||  |||||| ||||    
T  25803050 agatgtatcttcttttc 25803034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 32797081 - 32796970
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||| ||| ||||||||||| |   | || |||||||| ||| ||||||||||| ||| |||||||||||| ||||||||||| ||||||||||    
T  32797081 aatcacatcgaaataagagggatcctgagaccatgtaggtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatcaaca 32796982  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  32796981 agatgcatcttc 32796970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 305 - 415
Target Start/End: Original strand, 14820154 - 14820264
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| || |||||||||| |||| |   |||| ||||||| | ||||| || | |||||||||||||||||||| ||||||||||||||||||||||    
T  14820154 aatcacaccgcaatgagagggttcctgagcccgtgtaggtatggggctgcacggctaaaggaaggcttataagaattgtttggtactacttatatcaaca 14820253  T
Q  405 agatacatctt 415  Q
    |||| ||||||    
T  14820254 agatgcatctt 14820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 421
Target Start/End: Complemental strand, 13150657 - 13150584
Alignment:
Q  348 agactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||| ||||||| ||||    
T  13150657 agactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttc 13150584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 421
Target Start/End: Original strand, 29224363 - 29224440
Alignment:
Q  344 tatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||  |||||||| ||||||| ||||    
T  29224363 tatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttcttttc 29224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 25802658 - 25802578
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||||||||||||||| | |||||||| ||||||||  ||||||||||| |||||||||||||| ||||||| ||||    
T  25802658 aggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttcttttc 25802578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 32227536 - 32227616
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||| |||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||||| ||||||| ||||    
T  32227536 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttc 32227616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 37045035 - 37045146
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||||| | | |||| |||| || |||| ||||  |||||||| ||||||||||||| ||||||| ||| ||||||||||    
T  37045035 aatcacatctgaatgagagggatcctgaggccgtgtaggtgtgggactacatgaatgaaggaatgcttataagaattgtttggtaatacctatatcaaca 37045134  T
Q  405 agatacatcttc 416  Q
    || | |||||||    
T  37045135 aggtgcatcttc 37045146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 25238790 - 25238719
Alignment:
Q  345 atgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||  | |||||||||||| |||||||    
T  25238790 atgagactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttc 25238719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 4067454 - 4067395
Alignment:
Q  357 ggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||||||||||| ||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttc 4067395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 31104095 - 31104019
Alignment:
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtacta 392  Q
    ||||| ||||||| ||| || || ||||||||||| ||||||||| ||||||| |||||||||||| |||| |||||    
T  31104095 aatgatagggatcttaaggttgtacaggtatgagattgcatggttcaaggaagacttataagaattgtttgatacta 31104019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 2911095 - 2911198
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| | |||||||||||||||  | | |||||||||||| |||  |||||||||| ||| | |||||| |||| |||| || ||| ||||||||||    
T  2911095 aatcacacctgaatgagagggatcccgaggccgtgcaggtatgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaaca 2911194  T
Q  405 agat 408  Q
    ||||    
T  2911195 agat 2911198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 26310088 - 26310024
Alignment:
Q  352 tgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    ||||||||||||||| |  |||||||||||||||| |||||| |||| ||| ||||| |||||||    
T  26310088 tgcatggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttc 26310024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 29224233 - 29224268
Alignment:
Q  239 atgtaatgctcgaggctgatgaggacggggagtggt 274  Q
    |||||| |||||||||||||||||||||||||||||    
T  29224233 atgtaacgctcgaggctgatgaggacggggagtggt 29224268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 33466945 - 33466904
Alignment:
Q  239 atgtaatgctcgaggctgatgaggacggggagtggtccgact 280  Q
    ||||||||| |||||||||||||| ||||||||||| |||||    
T  33466945 atgtaatgcccgaggctgatgagggcggggagtggttcgact 33466904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 45047156 - 45047071
Alignment:
Q  308 cacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactac 393  Q
    ||||||| ||||| || |||||| |  ||||||  ||||||||||| ||| |||||| ||  |||||||||||| |||||||||||    
T  45047156 cacatcgaaatgatagtgatcctcagatcgtgcgagtatgagactgtatgattgaagaaaaacttataagaattatttggtactac 45047071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 8e-62; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 214 - 421
Target Start/End: Original strand, 9124867 - 9125075
Alignment:
Q  214 gttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacat 312  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||| | |||||||||||||  ||||||||    
T  9124867 gttgtaacgccttcgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 9124966  T
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    ||||||||||| |||| | | | |||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||| |||||||||||||| |||    
T  9124967 cggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 9125066  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  9125067 cttcttttc 9125075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 216 - 414
Target Start/End: Complemental strand, 11517624 - 11517426
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || ||||| |||||||| |||||||||||||| ||||||||| | |||||||||||||  ||||||||||    
T  11517624 tgtaacgcctccgcttggtgggcatgtaacgcccgaggttgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 11517525  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | ||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  11517524 gaatgagagggatcctgaggccgtacaggtatgggactgcatgg-tgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 11517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 215 - 415
Target Start/End: Complemental strand, 5406824 - 5406624
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcg 314  Q
    ||||||||||| ||||| ||||| |||||| |||||||||||||||||  || |||||||||| ||| || ||| ||||| |||||||  ||||||||||    
T  5406824 ttgtaacgcctccgcttcgtgggcatgtaacgctcgaggctgatgagggtggagagtggtccggctcatgacagcttctaagcaaaactgaatcacatcg 5406725  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||| ||||||| ||| |||||||||||||| |||||    
T  5406724 gaatgatagggatcctaaagtcgtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatct 5406625  T
Q  415 t 415  Q
    |    
T  5406624 t 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 13125372 - 13125166
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || |||||| ||||||| |||||||||||| | ||||||||| | |||||||||||||  ||||| ||||    
T  13125372 tgtaacgcctccgcttggtgggcatgtaacgcccgaggcggatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcatatcg 13125273  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||| | | | | |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||    
T  13125272 gaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatct 13125173  T
Q  415 tcatttc 421  Q
    || ||||    
T  13125172 tcttttc 13125166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 216 - 408
Target Start/End: Original strand, 42515002 - 42515195
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    ||||||| || ||||||||||| |||||| || ||||||||||||||  || |||||||||| ||||||||| | ||||||||||||   ||||||||||    
T  42515002 tgtaacgtctccgcttggtgggcatgtaacgcccgaggctgatgagggtggagagtggtccggctcctggcatgcttctaggcaaaattgaatcacatcg 42515101  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||||||||||||| | | |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  42515102 gaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagat 42515195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 18833196 - 18833402
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||  ||||||||||| |||||| ||||  ||||||||||| ||||||||||||||  |||||||| | |||||||||||||  ||||||||||    
T  18833196 tgtaacgcccccgcttggtgggcatgtaacgctcagggctgatgagggcggggagtggtccggttcctggcatgcttctaggcaaaactgaatcacatcg 18833295  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||||| |||| | | ||| ||||||||  ||||||||||||| |||| ||||||| ||||| ||| ||||||| |||||||||||||| |||||    
T  18833296 gaatgagagggttcctgaggccgtacaggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatct 18833395  T
Q  415 tcatttc 421  Q
    || ||||    
T  18833396 tcttttc 18833402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 230 - 393
Target Start/End: Complemental strand, 13124923 - 13124759
Alignment:
Q  230 ttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatc 328  Q
    |||||||| |||||| || |||||||||||||| |||||||||||| | ||||||||| | |||||||||||||  ||||| || |||||||||||||||    
T  13124923 ttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcatattggaatgagagggatc 13124824  T
Q  329 ctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactac 393  Q
     | | | |||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  13124823 ttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtactac 13124759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 251 - 421
Target Start/End: Complemental strand, 2941958 - 2941787
Alignment:
Q  251 aggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgag 349  Q
    |||||||||||| || ||||||| ||| |||| | || | |||||||||||||  ||||||||| |||||||||||||||| | | ||| |||||||| |    
T  2941958 aggctgatgagggcgaggagtggcccggctcccgccatgcttctaggcaaaactgaatcacatcagaatgagagggatcctgaggccgtacaggtatggg 2941859  T
Q  350 actgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  2941858 actgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttcttttc 2941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 264 - 415
Target Start/End: Original strand, 25182320 - 25182471
Alignment:
Q  264 cggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaa 363  Q
    |||||||||||| | ||||| |||| |||||||||||    | ||||||||||||||||| |||||| |    ||||| |||||||||||||||||||||    
T  25182320 cggggagtggtcaggctcctagcagcttctaggcaaagacgagtcacatcggaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaa 25182419  T
Q  364 ggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  25182420 ggaagacttataagaattgtttggtactacctatatcaacaagatacatctt 25182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 42515544 - 42515660
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||||| | | |||| |||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  42515544 aatcacatcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaaca 42515643  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  42515644 agatgcatcttcttttc 42515660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 2193256 - 2193367
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| |   |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  2193256 aatcacaccggaatgagagggttcctgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 2193355  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  2193356 agatgcatcttc 2193367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 35474267 - 35474156
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||| | |||||| |||||||||||| ||||||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  35474267 aatcacaccggaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaaca 35474168  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  35474167 agatgcatcttc 35474156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 6747744 - 6747633
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| ||||||||||||||||| | | |||| |||||||| ||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  6747744 aatcacattggaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaaca 6747645  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  6747644 agatgcatcttc 6747633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 6719220 - 6719104
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| ||||||||||||||||| | |  ||| ||||||| |||| |||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  6719220 aatcacattggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaaca 6719121  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  6719120 agatgcatcttcttttc 6719104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 28495854 - 28495970
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | | |||| ||||||| |||| |||||||||||||||||||||||||| | || |||||||| ||||||||||    
T  28495854 aatcacatcggaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaaca 28495953  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  28495954 agatgcatcttcttttc 28495970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 34405737 - 34405621
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||||| | | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  34405737 aatcacaccggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaaca 34405638  T
Q  405 agatacatcttcatttc 421  Q
     ||| ||||||| ||||    
T  34405637 ggatgcatcttcttttc 34405621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 36422260 - 36422368
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||||||| | | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  36422260 cggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 36422359  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  36422360 cttcttttc 36422368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 2189144 - 2189260
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | |  |||||||| || ||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||    
T  2189144 aatcacaccggaatgagagggttcctgaggctgtgcaggtgtgggactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaaca 2189243  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  2189244 agatgcatcttcttttc 2189260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 2611798 - 2611687
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||||| |||| | ||| || ||||||||||||  ||||| ||||||||||||||||||||| ||||||||||  |||| |||||    
T  2611798 aatcacatcggaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaaca 2611699  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  2611698 agatgcatcttc 2611687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 36015557 - 36015454
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||||||| || |  ||||| |||||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  36015557 aatcacaccggaatgagagggatcccaaggcagtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaaca 36015458  T
Q  405 agat 408  Q
    ||||    
T  36015457 agat 36015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 421
Target Start/End: Complemental strand, 29357592 - 29357486
Alignment:
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||| ||||  | |||||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||  |||||||||||||| |||||    
T  29357592 gaatgagaggtatcccgaggtcgtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatct 29357493  T
Q  415 tcatttc 421  Q
    || ||||    
T  29357492 tcttttc 29357486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 46425741 - 46425857
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| |   | || ||||||| |||| ||||||||||  |||||||||||||||| ||||||| ||| ||||||||||    
T  46425741 aatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataaggcttataagaattgtttggtattacctatatcaaca 46425840  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  46425841 agatgcatcttcttttc 46425857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 679817 - 679919
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||||| | |||||| ||||||| || | ||||| |||||||||||||||||||| || |||||||||| ||||||||||    
T  679817 aatcacatcagaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataagaa-ttgttggtactacctatatcaaca 679915  T
Q  405 agat 408  Q
    ||||    
T  679916 agat 679919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 28495754 - 28495643
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||| ||||||||||||||||||||| | |||||| ||||||| |||| ||||||||||||||| |||||||||||| ||  ||  ||| ||||||||||    
T  28495754 aatcccatcggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaaca 28495655  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  28495654 agatgcatcttc 28495643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 405
Target Start/End: Complemental strand, 26957703 - 26957603
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | |  ||| |||||||  ||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  26957703 aatcacatcggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaaca 26957604  T
Q  405 a 405  Q
    |    
T  26957603 a 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 31743970 - 31743854
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| |||| ||||||| ||||| | || ||||||| | ||||||||||||||||||||||| ||||||||||||  |||||| |||  ||||||||||    
T  31743970 aatcatatcgaaatgagatggatcttgaaatcgtgcaagcatgagactgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaaca 31743871  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  31743870 agatgcatcttcttttc 31743854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 29039166 - 29039055
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||||| | | |||| || |||| |||| |||||||||| | ||||||| ||||||| ||||||||||| ||||||||||    
T  29039166 aatcacatcggaatgagaggcatcctgaggccgtgtagatatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 29039067  T
Q  405 agatacatcttc 416  Q
    | || |||||||    
T  29039066 acatgcatcttc 29039055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 421
Target Start/End: Complemental strand, 31406790 - 31406614
Alignment:
Q  246 gctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacat--aatcacatcggaatgagagggatcctaaagtcgtgcagg 343  Q
    ||||||||||||||||| ||||||||||| |  ||| ||| || |||||  ||||| ||  |||||||||  ||||||||||||||| ||| |||||||     
T  31406790 gctcgaggctgatgagggcggggagtggttcagctcttggaagcttctaaacaaaa-atcgaatcacatcaaaatgagagggatcctgaagccgtgcaga 31406692  T
Q  344 tatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    | || ||||| ||||||||| || | ||||| |||||| ||||||  ||| |||||||||||||| ||||||| ||||    
T  31406691 tctgggactgaatggttgaaagatgacttattagaattgtttggtgttacctatatcaacaagatgcatcttcttttc 31406614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 305 - 415
Target Start/End: Original strand, 43233413 - 43233523
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| || ||||||||||||| | | | |||| ||||||| ||||| |||||| ||||||| |||||||||||| ||||||||||  ||||||||||    
T  43233413 aatcacaccgaaatgagagggatcatgaggccgtgtaggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaaca 43233512  T
Q  405 agatacatctt 415  Q
    |||| ||||||    
T  43233513 agatgcatctt 43233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 422
Target Start/End: Complemental strand, 22529381 - 22529264
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| ||| |||||||||||||||| | ||| || | ||||| | || |||||||||||||||||||||||||| | ||||||||||  ||||| ||||    
T  22529381 aatcatatccgaatgagagggatcctgaggtcatgtaagtatgggcctacatggttgaaggaaggcttataagaaatgtttggtactatctatataaaca 22529282  T
Q  405 agatacatcttcatttca 422  Q
    |||| ||||||| |||||    
T  22529281 agatgcatcttcttttca 22529264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 422
Target Start/End: Complemental strand, 35527267 - 35527150
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| || ||||||||||||||  | ||||||||  |||| |||||  |||||||| ||||||||||||||||| |||||| |||| ||||||||||    
T  35527267 aatcacaccgaaatgagagggatcccgaggtcgtgcaaatatgggactggttggttgaaagaaggcttataagaattgtttggtgctacctatatcaaca 35527168  T
Q  405 agatacatcttcatttca 422  Q
    |||| ||| ||| |||||    
T  35527167 agatgcatattcttttca 35527150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 2465777 - 2465849
Alignment:
Q  349 gactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||||    
T  2465777 gactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttc 2465849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 2465960 - 2466040
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||| |||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||| | ||||||| ||||    
T  2465960 aggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttc 2466040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 33316757 - 33316831
Alignment:
Q  334 gtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||||||||||||| ||||||||||||||   ||||||||||| ||||  | ||||||||||||||||||    
T  33316757 gtcgtgcaggtatgagactacatggttgaaggaaaaattataagaattgtttgacaatacttatatcaacaagat 33316831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 421
Target Start/End: Complemental strand, 26421875 - 26421790
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||| || |||||| | |||| |||||||||  |||||| ||||    
T  26421875 cgtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttc 26421790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 6585638 - 6585721
Alignment:
Q  335 tcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaac--aagatacatcttc 416  Q
    |||||||| ||||||| |||||| ||||| |||| ||||||| |||| ||||||||||| |||||||||  |||||||||||||    
T  6585638 tcgtgcagatatgagattgcatgattgaaagaagacttataaaaattgtttggtactacctatatcaacaaaagatacatcttc 6585721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 9623208 - 9623319
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||  ||||||||||||||||  | || ||||| | |||||||| |||||| ||||||   |||||||||||| |||| ||| || ||||||||||    
T  9623208 aatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaaca 9623307  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  9623308 agatgcatcttc 9623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 416
Target Start/End: Original strand, 1628719 - 1628824
Alignment:
Q  308 cacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaaga 407  Q
    ||||| ||||||||||||||  | ||| ||||||| |||| || ||||||||||||| |||||||||   |||| ||||||||||   ||||||||||||    
T  1628719 cacattggaatgagagggatgttgaagccgtgcagatatgggattgcatggttgaagaaaggcttat---aattgtttggtactatcgatatcaacaaga 1628815  T
Q  408 tacatcttc 416  Q
    | |||||||    
T  1628816 tgcatcttc 1628824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 11372453 - 11372539
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactac 393  Q
    |||||| |||| ||||||| ||| || | | || |||||||| | || ||||||||||||||||||||||||||| |||||||||||    
T  11372453 tcacattggaacgagagggttcccaaggccatgtaggtatgaaattgtatggttgaaggaaggcttataagaattgtttggtactac 11372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 16811961 - 16811905
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtacta 392  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||| ||| ||||||    
T  16811961 cgtgtaggtatgagactacatggttgaaggaatgcttataagaattgttttgtacta 16811905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 37672191 - 37672263
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||||| |||||||||||||| |  |||| |||||| |||| ||||||||||||| || |||||||||    
T  37672191 cgtgcaggtataagactgcatggttgcaaaaaggtttataataattgtttggtactacttgtaccaacaagat 37672263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 20966087 - 20966154
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||||||||||| |||||||| | |||||||||||| ||| ||| ||| |||| |||||||||    
T  20966087 aggtatgagactgcatgattgaaggatgacttataagaattattttgtaatacctataccaacaagat 20966154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 2490071 - 2490136
Alignment:
Q  337 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaa 402  Q
    ||||| ||||| ||||||||| ||||||||| ||||||||||| | |||| |||||| ||||||||    
T  2490071 gtgcacgtatgtgactgcatgattgaaggaatgcttataagaagtgtttgttactacctatatcaa 2490136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 408
Target Start/End: Complemental strand, 26421401 - 26421348
Alignment:
Q  355 atggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||||||||||| ||||||||||||  ||| |||||| ||||||||||||||    
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagat 26421348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 11372901 - 11372975
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaatt 381  Q
    |||||||  |||||||||| |||||| | | || |||||||||| |||||||||||| |||| ||| ||||||||    
T  11372901 tcacatcaaaatgagagggttcctaaggccatgtaggtatgagattgcatggttgaatgaagacttgtaagaatt 11372975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 16192368 - 16192430
Alignment:
Q  354 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||| ||||| ||||| ||||||||||| ||||||| ||| || ||||||||||| |||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttc 16192430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 8e-62; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 214 - 421
Target Start/End: Original strand, 22556444 - 22556652
Alignment:
Q  214 gttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacat 312  Q
    |||||||||||| ||||||||||| |||||| || ||||||| |||||| |||||||||||||| ||||||||| | |||||||||||||  ||||||||    
T  22556444 gttgtaacgcctccgcttggtgggcatgtaacgcccgaggctaatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 22556543  T
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||    
T  22556544 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcat 22556643  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  22556644 cttcttttc 22556652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 2473869 - 2474075
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||| ||| ||||||||||| |||||| || ||| |||||||||| |||||||||||||||||||||||| | || |||| |||||  ||||||||||    
T  2473869 tgtaacacctccgcttggtgggcatgtaacgcccgaagctgatgagggcggggagtggtccgactcctggcatgcttttaggaaaaactgaatcacatcg 2473968  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||    
T  2473969 gaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatct 2474068  T
Q  415 tcatttc 421  Q
    || ||||    
T  2474069 tcttttc 2474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 2474315 - 2474521
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || |||||||||||||| |||||||||||||||||||||||| | ||||||| |||||  ||||||||||    
T  2474315 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccgactcctggcatgcttctaggaaaaactgaatcacatcg 2474414  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||| |||||||| ||||| ||| |||| |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||||| |||||    
T  2474415 gaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatct 2474514  T
Q  415 tcatttc 421  Q
    || ||||    
T  2474515 tcttttc 2474521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 3887293 - 3887087
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || |||||||||||||| |||||||||||||  ||||||||| | || ||||||||||  ||||||||||    
T  3887293 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccagctcctggcatgcttttaggcaaaactgaatcacatcg 3887194  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||| |||||| | | ||| |||||||| |||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||| |||||    
T  3887193 gaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatct 3887094  T
Q  415 tcatttc 421  Q
    || ||||    
T  3887093 tcttttc 3887087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 231 - 421
Target Start/End: Original strand, 22556894 - 22557085
Alignment:
Q  231 tggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcc 329  Q
    ||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||| | |||| ||||||||  ||||||||||||||||||| | ||     
T  22556894 tggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttcttggcaaaactgaatcacatcggaatgagagagttca 22556993  T
Q  330 taaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    | | | |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||||||| ||||||| ||||    
T  22556994 tgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttcttttc 22557085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 3886837 - 3886631
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||| ||| ||||||||||| |||||| || |||||||||||||| |||||| ||||||| ||||| ||| | ||||||| ||||   ||||||||||    
T  3886837 tgtaacacctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggaatggtccggctcctagcatgcttctaggaaaaattgaatcacatcg 3886738  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | ||||| || ||||| ||||||||||| ||||||| ||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  3886737 gaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatct 3886638  T
Q  415 tcatttc 421  Q
    || ||||    
T  3886637 tcttttc 3886631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 228 - 416
Target Start/End: Original strand, 1821828 - 1822017
Alignment:
Q  228 gcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagaggga 326  Q
    |||||||||| |||||| |   |||||||| ||||  ||||||||||||| ||| ||||| | |||||||||||    ||| ||||||||||||||| ||    
T  1821828 gcttggtgggcatgtaacgtctgaggctgacgagggtggggagtggtccggctcatggcatgcttctaggcaaagttgaattacatcggaatgagagaga 1821927  T
Q  327 tcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  1821928 tcttaaggtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 1822017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 8642180 - 8642064
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  8642180 aatcacatcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaaca 8642081  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  8642080 agatgcatcttcttttc 8642064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 188990 - 189184
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||||||| ||||||||||| || |||  | ||||||||||||||||||| |||||||||            |||||||||||||  |||||||||||    
T  188990 tgtaacgcctccgcttggtgggcatataacacccgaggctgatgaggacgggaagtggtccgg-----------ttctaggcaaaactgaatcacatcgg 189078  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||||| | | ||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||    
T  189079 aatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgtatctt 189178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 21886292 - 21886176
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | || ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  21886292 aatcacaccggaatgagagggttcctgaggttgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaaca 21886193  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  21886192 agatgcatcttcttttc 21886176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 34867790 - 34867906
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  34867790 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 34867889  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  34867890 agatgcatcttcttttc 34867906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 10927092 - 10926981
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||||| | |||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  10927092 aatcacatcagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 10926993  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  10926992 agatgcatcttc 10926981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 10927549 - 10927438
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | | |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  10927549 aatcacatcggaatgagagggatcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 10927450  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  10927449 agatgcatcttc 10927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 239 - 381
Target Start/End: Complemental strand, 22975223 - 22975080
Alignment:
Q  239 atgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcg 337  Q
    |||||| || |||||||||||||| || ||||||||||  ||| ||||| | |||||||||||||  |||||||||||||||||||||||||| | | ||    
T  22975223 atgtaacgcccgaggctgatgagggcgaggagtggtccagctcttggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccg 22975124  T
Q  338 tgcaggtatgagactgcatggttgaaggaaggcttataagaatt 381  Q
    |||||||||| |||||||||||||||| || |||||||||||||    
T  22975123 tgcaggtatgtgactgcatggttgaagaaaagcttataagaatt 22975080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 2058862 - 2058699
Alignment:
Q  246 gctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaa-cataatcacatcggaatgagagggatcctaaagtcgtgcaggt 344  Q
    |||| ||| |||||||| | | ||||||| ||||||||| ||  |||||||||||| |  |||||||||||| |||||| |||||| ||||| ||||| |    
T  2058862 gctcaagggtgatgagggcagagagtggttcgactcctgtcatcttctaggcaaaaaccgaatcacatcggattgagagagatcctgaagtcatgcagct 2058763  T
Q  345 atgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||| ||| |||||||||| |||||| ||||| ||||||||||| ||||||||||||||    
T  2058762 atgagactggatgattgaaggaagacttatatgaattgtttggtactacctatatcaacaagat 2058699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 17445601 - 17445490
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||| ||||||||||||||| | | |||| ||| ||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  17445601 aatcacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 17445502  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  17445501 agatgcatcttc 17445490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 27646981 - 27646870
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||||  | |||| ||||||| | || |||||||||||||||||||||||||||| ||||||||||| |||| |||||    
T  27646981 aatcacatcggaatgagagggatcctagggccgtgtaggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctataacaaca 27646882  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  27646881 agatgcatcttc 27646870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 34371612 - 34371728
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| ||| || | ||| ||||| || ||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  34371612 aatcacaccggaatgagagggttcccaaggccgtacaggtgtgggactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaaca 34371711  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  34371712 agatgcatcttcttttc 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 20039620 - 20039517
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | | |||| ||||||  |||| ||| |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20039620 aatcacatcggaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20039521  T
Q  405 agat 408  Q
    ||||    
T  20039520 agat 20039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 30720041 - 30719835
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| | ||||||||| |||||| |  |||| ||||  ||| |  | |||||||||||||||| || | || | ||||||||  |||||||||     
T  30720041 tgtaacgcctccacttggtgggcatgtaacgtccgagactgacaagggcatgtagtggtccgactcctgacacgcttattggcaaaaccgaatcacatca 30719942  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | || ||||| ||||| |||  ||| |||||||||||||||||| ||||| ||||||||||| ||||  |||||||| |||||    
T  30719941 gaatgagagggatcctgaggttgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatct 30719842  T
Q  415 tcatttc 421  Q
    || ||||    
T  30719841 tcttttc 30719835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 2193824 - 2193932
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||| | | | | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  2193824 cggaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 2193923  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  2193924 cttcttttc 2193932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 407
Target Start/End: Complemental strand, 16370852 - 16370752
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaag 406  Q
    |||||||| |||||||||| |||| | | | || |||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  16370852 tcacatcgaaatgagagggttcctgatgccatgtaggtataagactgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaag 16370753  T
Q  407 a 407  Q
    |    
T  16370752 a 16370752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 42788792 - 42788676
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||| | | |||| |||  || |||| |||||||||| |||| |||||||||||| ||||||||||| ||||||||||    
T  42788792 aatcacaacggaatgagagggatcctgaggccgtgtaggattgggactacatggttgaaagaagacttataagaattgtttggtactacctatatcaaca 42788693  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  42788692 agatgcatcttcttttc 42788676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 39146939 - 39147050
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||| ||||||||||||| | | | |||| ||||||| |||| |||||||||||| || |||||||||||| |||| |||||||||||| ||||    
T  39146939 aatcacatcgaaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaaca 39147038  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  39147039 agatgcatcttc 39147050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 11160822 - 11160724
Alignment:
Q  310 catcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||||||||||||| | |||||||| |||||||| ||| ||| ||||||||||||||||||| |||| ||||||||||  ||| ||||||||||    
T  11160822 catcggaatgagagggatcatgaagtcgtgtaggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagat 11160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 269 - 421
Target Start/End: Complemental strand, 30684739 - 30684586
Alignment:
Q  269 agtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaa 367  Q
    ||||||||||||||||||| | || ||||||||||  ||||||||||||||||| |||||||| | || ||||| |||||  ||  ||| |||||||| |    
T  30684739 agtggtccgactcctggcatgcttataggcaaaaccaaatcacatcggaatgagggggatcctgaggttgtgcaagtatggaacatcattgttgaaggga 30684640  T
Q  368 ggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||| ||||| ||||||||||  ||||  |||||||| ||||||| ||||    
T  30684639 ggcttatatgaattgtttggtactatctataaaaacaagatgcatcttcttttc 30684586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 8391467 - 8391352
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||||||| || | | |||| ||| |||||||| |||| |||||||||| |||||||||||| ||||||||| | | ||||||||    
T  8391467 aatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggtact-cctgtatcaaca 8391369  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  8391368 agatgcatcttcttttc 8391352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 34372068 - 34372184
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| | ||||||||||| ||| || | ||| || ||||| |||| |||||||||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  34372068 aatcacaccagaatgagagggttcccaaggccgtacaagtatgggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaaca 34372167  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  34372168 agatgcatcttcttttc 34372184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 421
Target Start/End: Complemental strand, 18750328 - 18750226
Alignment:
Q  319 gagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcat 418  Q
    ||||| |||||| ||||||||||||| ||  |||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| ||||| ||||||| |    
T  18750328 gagagagatcctgaagtcgtgcaggtttggaactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttctt 18750229  T
Q  419 ttc 421  Q
    |||    
T  18750228 ttc 18750226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 24182391 - 24182280
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||  |||||||||||||| | |   |||||| |||||||||   ||||||||||||||||||||||||||| ||||||||||  |||| |||||    
T  24182391 aatcacattagaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatctataccaaca 24182292  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  24182291 agatgcatcttc 24182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 18304431 - 18304547
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||| ||||||| | |||||| ||||||| |||| ||||| ||| | || |||||||  |||| ||||||||||| ||||||||||    
T  18304431 aatcacaacggaatgagaaggatcctgaggtcgtgtaggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaaca 18304530  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||| ||| ||||    
T  18304531 agatgcatattcttttc 18304547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 15513159 - 15513047
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaagga--aggcttataagaattttttggtactacttatatcaa 402  Q
    |||||||||||||||||||||||| | | |  ||| ||||||| |||| |||||||||||||  | ||||||||||| || ||||||||||  |||||||    
T  15513159 aatcacatcggaatgagagggatcattaggctgtgtaggtatgggactacatggttgaaggaatatgcttataagaa-ttgttggtactaccaatatcaa 15513061  T
Q  403 caagatacatcttc 416  Q
    |||||| |||||||    
T  15513060 caagatgcatcttc 15513047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 416
Target Start/End: Complemental strand, 4658167 - 4658028
Alignment:
Q  275 ccgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttat 374  Q
    |||||||||| |||  |||||||||| |  |||||||||| ||| ||||||||| | ||  ||||||||||||||||| |||||||||| ||| | ||||    
T  4658167 ccgactcctgacagcctctaggcaaa-ctgaatcacatcgaaataagagggatcttgaaaccgtgcaggtatgagacttcatggttgaacgaa-gattat 4658070  T
Q  375 aagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||| || |||| |||||| |||| |||||| || |||||||    
T  4658069 aagacttgtttgatactacctataacaacaacatgcatcttc 4658028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 416
Target Start/End: Complemental strand, 43356790 - 43356655
Alignment:
Q  279 ctcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 378  Q
    |||||||| |||||||||| ||  | | ||||||||||||||||||| |||| |  || |||||||||||||||||||| ||| |||| | |||||||||    
T  43356790 ctcctggcggtttctaggcgaactaaattcacatcggaatgagaggg-tcctgagatcatgcaggtatgagactgcatgattg-aggatgacttataaga 43356693  T
Q  379 attttttggtactacttatatcaacaagatacatcttc 416  Q
    ||| |||||||| || || | |||||| || |||||||    
T  43356692 attgtttggtacaacctaaaccaacaatatgcatcttc 43356655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 5067037 - 5066934
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| | ||||||||| |||||  | | |||||| ||||||||||| ||| || ||||||  |||||||||||| ||||||| ||  ||||||||||    
T  5067037 aatcacaccagaatgagagagatcccgaggccgtgcatgtatgagactgtatgattaaaggaaaacttataagaattgtttggtattatctatatcaaca 5066938  T
Q  405 agat 408  Q
    ||||    
T  5066937 agat 5066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 32574774 - 32574694
Alignment:
Q  334 gtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    |||||| ||||||||||||||| |||| ||| |||||||||| ||||| ||||||||||| ||||  ||||| || ||||||    
T  32574774 gtcgtgtaggtatgagactgcacggttaaag-aaggcttataggaattgtttggtactacctatacaaacaaaatgcatctt 32574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 4102812 - 4102895
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactac 393  Q
    ||||||||| ||||||||||||| || |   ||||||||||||||||||     ||||| ||| ||||||||||||| |||||||||||    
T  4102812 aatcacatctgaatgagagggattctgataccgtgcaggtatgagactg-----ttgaaagaatgcttataagaattgtttggtactac 4102895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 405
Target Start/End: Original strand, 42429146 - 42429245
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||| ||||| ||||| |   |||| ||||||| ||   ||||||||||||| | |||||||||||| ||||||||||| | ||||||||    
T  42429146 aatcacatcggaataagagg-atcctgagaccgtgtaggtatgtgaacacatggttgaaggaggacttataagaattgtttggtactacctttatcaaca 42429244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 416
Target Start/End: Complemental strand, 29680236 - 29680142
Alignment:
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||| |||| | | | |||| ||||||| |||| ||||||||||||||||||||||||       ||||| ||| |||||||||||||| |||||    
T  29680236 gaatgagagagatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataag-------tggtaatacctatatcaacaagatgcatct 29680144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 11757387 - 11757354
Alignment:
Q  306 atcacatcggaatgagagggatcctaaagtcgtg 339  Q
    ||||||||||||||||||||||||||||| ||||    
T  11757387 atcacatcggaatgagagggatcctaaagccgtg 11757354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 1e-60; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 13492699 - 13492905
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||| | |||||||||||||  ||||| ||||    
T  13492699 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcatatcg 13492798  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||| ||||||| | |  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||||    
T  13492799 gaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatct 13492898  T
Q  415 tcatttc 421  Q
    || ||||    
T  13492899 tcttttc 13492905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 16519879 - 16520084
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||||||| | ||||||||| |||||| || |||||||||||||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||    
T  16519879 tgtaacgcctccacttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcagcttctaggcaaaacagaatcacatcgg 16519978  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||||| | |  ||| |||||||||||| |||||| |||||||||||||| ||| || ||||||||||| |||||||||||||| ||||||    
T  16519979 aatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaacaagatgcatctt 16520078  T
Q  416 catttc 421  Q
    | ||||    
T  16520079 cttttc 16520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 9351973 - 9352178
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||||||| ||||||||||| ||||||  | |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||     
T  9351973 tgtaacgcctccgcttggtgggcatgtaacacccgaggctgatgagggcggggagtggtccggctcctggcagcttctaggcaaaacataatcacatcga 9352072  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||||| | |  ||| |||||||||||| |||||| ||||| || ||||||| | || ||||||||||| ||||| |||||||| ||||||    
T  9352073 aatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaacaagatgcatctt 9352172  T
Q  416 catttc 421  Q
    | ||||    
T  9352173 cttttc 9352178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 228 - 409
Target Start/End: Complemental strand, 17731337 - 17731155
Alignment:
Q  228 gcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagaggga 326  Q
    |||||||||| |||||| ||  ||||||||||||| |||||||||||||| ||||| ||| | ||||||||||||   ||||||||||||||||||||||    
T  17731337 gcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctagcatgcttctaggcaaaattgaatcacatcggaatgagaggga 17731238  T
Q  327 tcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagata 409  Q
    |||| | | ||| |||||||| |||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  17731237 tcctgaggccgttcaggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaacaagata 17731155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 249 - 421
Target Start/End: Original strand, 7911821 - 7911994
Alignment:
Q  249 cgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatg 347  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||   | | |||||||||||     
T  7911821 cgaggctgatgagagcggggagtggtccgactcctggcatgtttctaggaaaaactgaatcacatcggaatgagagggatctcgaggccgtgcaggtata 7911920  T
Q  348 agactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
     |||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  7911921 ggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttc 7911994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 13191749 - 13191543
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    ||||| |||| ||||||||||| |||||| ||  ||||||||||||| ||| |||| ||||| ||| ||| | | ||| ||| |||||  ||||||||||    
T  13191749 tgtaatgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggcgagtagtccggctcttggtatgcttcgaggaaaaactaaatcacatcg 13191650  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||||||||||||     || ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  13191649 gaatgagagggatcctaagactatgtaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 13191550  T
Q  415 tcatttc 421  Q
    || ||||    
T  13191549 tcttttc 13191543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 231 - 421
Target Start/End: Original strand, 7912235 - 7912426
Alignment:
Q  231 tggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcc 329  Q
    ||||||| |||||| || ||| || ||||||| |||||||||||||| ||||||||| | ||||||| |||||  ||||||||||||||||||||||||     
T  7912235 tggtgggcatgtaacgcccgacgcagatgagggcggggagtggtccggctcctggcatgcttctaggaaaaactgaatcacatcggaatgagagggatct 7912334  T
Q  330 taaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
      | | |||||||||||| |||||||||||||||||||  |||||| ||||| ||||||||||| |||||||||||||| ||| ||| ||||    
T  7912335 cgaggccgtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagatgcattttcttttc 7912426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 305 - 422
Target Start/End: Complemental strand, 20896834 - 20896717
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20896834 aatcacatcggaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20896735  T
Q  405 agatacatcttcatttca 422  Q
    |||| ||||||| |||||    
T  20896734 agatgcatcttcttttca 20896717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 9440614 - 9440486
Alignment:
Q  265 ggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaag 364  Q
    ||||||||||||| ||| | |||| ||||||| |||||  |||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||     
T  9440614 ggggagtggtccggctctttgcagcttctagggaaaactgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgggacttcatggttgaat 9440515  T
Q  365 gaaggcttataagaattttttggtactac 393  Q
    ||||||||||||||||| |||||||||||    
T  9440514 gaaggcttataagaattgtttggtactac 9440486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 17027677 - 17027561
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||  | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  17027677 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 17027578  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  17027577 agattcatcttcttttc 17027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 283 - 421
Target Start/End: Complemental strand, 9440477 - 9440339
Alignment:
Q  283 tggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattt 382  Q
    |||||| ||||||| || ||  |||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| ||| |||||||||||||     
T  9440477 tggcagcttctagggaagaccgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaatgaaagcttataagaattg 9440378  T
Q  383 tttggtactacttatatcaacaagatacatcttcatttc 421  Q
    || ||||||||||||||||||||||| ||| ||| ||||    
T  9440377 ttcggtactacttatatcaacaagatgcattttcttttc 9440339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 2720702 - 2720600
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||| ||||    
T  2720702 cggaatgagagggatcccaaggtcgtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagacacat 2720603  T
Q  413 ctt 415  Q
    |||    
T  2720602 ctt 2720600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 32292859 - 32292995
Alignment:
Q  279 ctcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 378  Q
    |||||||||  ||||||||||| || | |||||| ||||||||||  ||||| |  ||||||||||||||||||||||||||||| ||||||||||||||    
T  32292859 ctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatccttagatcgtgcaggtatgagactgcatggttgaatgaaggcttataaga 32292958  T
Q  379 attttttggtactacttatatcaacaagatacatctt 415  Q
    ||| ||||||||||| |||| |||||| |||||||||    
T  32292959 attgtttggtactacctataccaacaaaatacatctt 32292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 20126328 - 20126217
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||||| |  ||| |||||||||||| |||||||||||||||||||||||||||  |||| |||||| ||||||||||    
T  20126328 aatcacatcggaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaaca 20126229  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  20126228 agatgcatcttc 20126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 6331058 - 6330942
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||| ||||||| | | |||| |||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  6331058 aatcacatcggaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 6330959  T
Q  405 agatacatcttcatttc 421  Q
    | || ||||||| ||||    
T  6330958 atatgcatcttcttttc 6330942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 20850321 - 20850437
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| || | | | |||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  20850321 aatcacaccggaatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaaca 20850420  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20850421 agatgcatcttcttttc 20850437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 14771857 - 14771762
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||||||||||||||  ||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  14771857 cggaatgagagggatcccgaagccgtgtaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 14771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 422
Target Start/End: Complemental strand, 9441037 - 9440886
Alignment:
Q  269 agtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaag 368  Q
    ||||||||| |||||||||| |||||||||||||  |||||||||  |||   |||||||||||  ||||||||| |||  ||| ||||||||||||||     
T  9441037 agtggtccggctcctggcagcttctaggcaaaactgaatcacatcaaaatagaagggatcctaa--tcgtgcaggcatggaactacatggttgaaggaat 9440940  T
Q  369 gcttataagaattttttggtactacttatatcaacaagatacatcttcatttca 422  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||    
T  9440939 gcttataagaattctttggtactacttttatcaacaagatgcattttcttttca 9440886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 23986463 - 23986347
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||  | | |||| ||||||| |||| |||||||||||| ||||||||||||||| ||||||||||| ||||| ||||    
T  23986463 aatcacatcggaatgagagggatccggaggccgtgtaggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaaca 23986364  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  23986363 agatgcatcttcttttc 23986347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 27334161 - 27334277
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||| ||||||| |||| | ||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  27334161 aatcacaccggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 27334260  T
Q  405 agatacatcttcatttc 421  Q
    ||||  |||||| ||||    
T  27334261 agatgaatcttcttttc 27334277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 27394901 - 27395017
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||| ||||||| |||| | ||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  27394901 aatcacaccggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 27395000  T
Q  405 agatacatcttcatttc 421  Q
    ||||  |||||| ||||    
T  27395001 agatgaatcttcttttc 27395017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 3652486 - 3652597
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | |  ||| ||||||| |||| |||||||||||||||||||||||||||| | || |||||| ||||||||||    
T  3652486 aatcacatcggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaaca 3652585  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  3652586 agatgcatcttc 3652597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 337 - 416
Target Start/End: Original strand, 21312003 - 21312082
Alignment:
Q  337 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||    
T  21312003 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttc 21312082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 31821838 - 31821728
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | | | || |||||||||||| |||||||||||||| ||||||||||||| ||||||||||  ||||||||||    
T  31821838 aatcacatcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatatcaaca 31821739  T
Q  405 agatacatctt 415  Q
    |||| ||||||    
T  31821738 agatgcatctt 31821728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 2681362 - 2681246
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||| |||| || ||||||||||||||| |||| |||||||||||| |||||||||||  |||||||||    
T  2681362 aatcacaccggaatgagagggttcctgaggccgtgtaggtttgggactgcatggttgaatgaagacttataagaattgtttggtactacccatatcaaca 2681263  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  2681262 agatgcatcttcttttc 2681246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 415
Target Start/End: Complemental strand, 28065982 - 28065874
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaag 406  Q
    |||||||||||||||||||||||||| |||||| ||  ||||||||| ||| ||||| ||| ||||||||||||| ||||||||||  | ||||||||||    
T  28065982 tcacatcggaatgagagggatcctaaggtcgtgtagaaatgagactgtatgattgaatgaaagcttataagaattgtttggtactatctctatcaacaag 28065883  T
Q  407 atacatctt 415  Q
    || ||||||    
T  28065882 atgcatctt 28065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 17850918 - 17851029
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||| | |||||||| ||||| |||||||||||| || ||| ||| ||||||  | ||||||||||| | ||||||||    
T  17850918 aatcacaccggaatgagagggatcctgaggtcgtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaaca 17851017  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  17851018 agatgcatcttc 17851029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 17851374 - 17851485
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||  | | |||||| ||||| |||||||||||| || ||||||||||||||  | ||||||||||| | ||||||||    
T  17851374 aatcacaccggaatgagagggatcccgaggccgtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttatcaaca 17851473  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  17851474 agatgcatcttc 17851485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 21311515 - 21311626
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||||| || | | | ||| || ||||| |||||||||||||||||||| |||||||||||| ||||||| ||| || || ||||    
T  21311515 aatcacatcggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaaca 21311614  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  21311615 agatccatcttc 21311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 15929582 - 15929698
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||| |||| |||||||| | | || | ||||  |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  15929582 aatcacatcagaataagagagatcctaatgccttgtatgtattggactacatggttgaatgaaggcttataagaattatttggtactacctatatcaaca 15929681  T
Q  405 agatacatcttcatttc 421  Q
    | || ||||||| ||||    
T  15929682 aaatgcatcttcttttc 15929698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 20735731 - 20735811
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||| |||| |||| ||| ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||    
T  20735731 aggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttc 20735811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 23776449 - 23776557
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||| ||||| | | | || ||||||| |||| ||||||||||||||| |||||||||||  | ||||||||| |||||||||||||| |||    
T  23776449 cggaatgagaggtatcctgaggccttgtaggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcat 23776548  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  23776549 cttcttttc 23776557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 11062321 - 11062396
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||||||| ||| |||||||||||||||||||||||||| | ||| ||||||| |||||||||||||| |||||||    
T  11062321 aggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttc 11062396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 2890954 - 2890868
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttca 422  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| ||||| | ||||| |||||    
T  2890954 cgtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttcttttca 2890868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 363
Target Start/End: Original strand, 13490055 - 13490179
Alignment:
Q  240 tgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgt 338  Q
    ||||| || |||||||||||| | |||||||||||||| |||||| || | ||||||| ||||| ||||||||||| |||||||| |||| | | |  ||    
T  13490055 tgtaacgcccgaggctgatgaaggcggggagtggtccggctcctgacatgcttctaggaaaaacttaatcacatcgaaatgagagagatcatgaggctgt 13490154  T
Q  339 gcaggtatgagactgcatggttgaa 363  Q
    ||||||||  |||||||||||||||    
T  13490155 gcaggtataggactgcatggttgaa 13490179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 3652981 - 3653051
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataag 377  Q
    |||||||||||||||||||||||| | |  ||| ||||||| ||||||||||||||| |||||||||||||    
T  3652981 tcacatcggaatgagagggatcctgaggctgtgtaggtatgggactgcatggttgaacgaaggcttataag 3653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 390
Target Start/End: Original strand, 9441061 - 9441135
Alignment:
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtac 390  Q
    ||||||||| ||||||||| ||||||| |||| |||| |||| ||||||||| ||||||||||||| ||||||||    
T  9441061 aatgagaggaatcctaaagccgtgcagatatgtgactacatgattgaaggaaagcttataagaattgtttggtac 9441135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 413
Target Start/End: Original strand, 28582964 - 28583071
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||   || ||||  |||||||||||||||| ||| || ||||||||| ||||||||||||||||| |||| ||| |  ||||||||||    
T  28582964 aatcacatcggaatagaagtgatctaaaagtcgtgcaggtat-agattgtatggttgaatgaaggcttataagaattatttgatacgatctatatcaaca 28583062  T
Q  405 agatacatc 413  Q
    |||| ||||    
T  28583063 agatgcatc 28583071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 415
Target Start/End: Complemental strand, 3885194 - 3885123
Alignment:
Q  344 tatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||| |||||||||| ||||| ||||||| ||||||||||| ||||  ||||| |||||||||    
T  3885194 tatgagactgcatagttgaaggaatgcttaaaagaattgtttggtactacatatactaacaaaatacatctt 3885123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 20732613 - 20732672
Alignment:
Q  340 caggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatat 399  Q
    |||||||| |||| |||||||| ||||||||||||||||||| ||||||||||| |||||    
T  20732613 caggtatgtgactacatggttgtaggaaggcttataagaattatttggtactacctatat 20732672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 33775119 - 33775048
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaaga 407  Q
    |||||| ||||| ||| ||||||||||||||||| ||||||||||| | |||| |||| |||||||||||||    
T  33775119 cgtgcaagtatgtgaccgcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaaga 33775048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 1991587 - 1991669
Alignment:
Q  339 gcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||||||||| |||||||| | ||||||||| ||||||| ||||||| ||| ||| | |||||||| ||||||| ||||    
T  1991587 gcaggtatgagactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttc 1991669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 12194330 - 12194439
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| ||||||||||| ||||| |   ||||||| ||||| |||||||| |||||| ||| ||||||| | |||||||| ||||  ||||||||||    
T  12194330 aatcacattggaatgagaggaatcctgagaccgtgcagatatga-actgcatgattgaagaaagacttataa-atttttttggcactatctatatcaaca 12194427  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  12194428 agatgcatcttc 12194439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 402
Target Start/End: Original strand, 10964339 - 10964401
Alignment:
Q  340 caggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaa 402  Q
    |||||||||||||| ||||| |||| ||| |||| ||||||| ||||||||||| ||||||||    
T  10964339 caggtatgagactgtatggtagaagaaagacttacaagaattgtttggtactacatatatcaa 10964401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 30729956 - 30729886
Alignment:
Q  334 gtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| ||||||||| |||||||||||||| | || |||| |||| ||||||||||| ||||| ||||    
T  30729956 gtcgtgcaagtatgagacagcatggttgaaggaggactcataaaaattgtttggtactacgtatataaaca 30729886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 17205376 - 17205449
Alignment:
Q  342 ggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||| |||||||| ||||| ||||  ||||||||||| ||||||||||| | || ||||||||| ||||||    
T  17205376 ggtatgaaactgcatgattgaatgaagaattataagaattgtttggtactacctttaccaacaagattcatctt 17205449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 15929235 - 15929315
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||||||| || |||||||| || ||||||||||||| ||||||| | | |||||||| ||||| ||| ||| ||||    
T  15929235 aggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattcttttc 15929315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 421
Target Start/End: Original strand, 13492393 - 13492448
Alignment:
Q  366 aaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||||||||||| |||| || ||| |||||||||||||| ||||||| ||||    
T  13492393 aaggcttataagaattgtttgatattacctatatcaacaagatgcatcttcttttc 13492448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 30966144 - 30966350
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || ||||||||||||||  ||||||||||||| ||||||||| | |||||||||||||  |||| |||||    
T  30966144 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggtggggagtggtccggctcctggcatgcttctaggcaaaactgaatcgcatcg 30966243  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  30966244 gaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 30966343  T
Q  415 tcatttc 421  Q
    || ||||    
T  30966344 tcttttc 30966350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 30966600 - 30966806
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||| ||| ||||||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||| | |||||||||||||  |||| |||||    
T  30966600 tgtaacacctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcgcatcg 30966699  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | ||| || ||||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||    
T  30966700 gaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatct 30966799  T
Q  415 tcatttc 421  Q
    || ||||    
T  30966800 tcttttc 30966806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 415
Target Start/End: Original strand, 24818236 - 24818436
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || ||||||||||||||  ||||||||||||| ||||||||| | ||||||| |||||  ||||||||||    
T  24818236 tgtaacgcctgcgcttggtgggcatgtaacgcccgaggctgatgagggtggggagtggtccggctcctggcatgcttctaggtaaaactgaatcacatcg 24818335  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | |||||| ||||| |||||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||| |||||    
T  24818336 gaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatct 24818435  T
Q  415 t 415  Q
    |    
T  24818436 t 24818436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 29259856 - 29259650
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||| | ||||||| || ||  ||||||||||    
T  29259856 tgtaacgcctccgcttggtgggcatgtaacgctcgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggtaagactgaatcacatcg 29259757  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| |   ||| || ||||| |||||||||||||||||||||||||| | |||| ||||||||||| |||||||||||||| |||||    
T  29259756 gaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagatgcatct 29259657  T
Q  415 tcatttc 421  Q
    || ||||    
T  29259656 tcttttc 29259650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 215 - 421
Target Start/End: Complemental strand, 5400054 - 5399847
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatc 313  Q
    ||||||||||| ||||||||| | |||||||||  ||||||||||||| | |||||||||||| ||||||||| | ||||||||||||   |||||||||    
T  5400054 ttgtaacgcctccgcttggtgagcatgtaatgcctgaggctgatgagggcagggagtggtccggctcctggcatgcttctaggcaaaattgaatcacatc 5399955  T
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatc 413  Q
    ||||||||||||||| | | |||||||| ||||| || || |||||| |||| ||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  5399954 ggaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatc 5399855  T
Q  414 ttcatttc 421  Q
    ||| ||||    
T  5399854 ttcttttc 5399847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 416
Target Start/End: Original strand, 1953078 - 1953266
Alignment:
Q  227 cgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagaggga 326  Q
    ||||||||||| |||||   ||||||| |||||||| |  ||||||||||| || ||| ||| || | ||||||||  ||||||||||||||||||||||    
T  1953078 cgcttggtgggcatgtagcactcgaggatgatgagggcaaggagtggtccggcttctgacagctttt-ggcaaaaccgaatcacatcggaatgagaggga 1953176  T
Q  327 tcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||| ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||| |||| |||||||    
T  1953177 tcctgaagtcgtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttc 1953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 25338143 - 25338027
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  25338143 aatcacaccggaatgagagggttcctgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaaca 25338044  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  25338043 agatgcatcttcttttc 25338027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 33174958 - 33175069
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | |||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  33174958 aatcacatcggaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 33175057  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  33175058 agatgcatcttc 33175069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 41754289 - 41754405
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| || | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  41754289 aatcacaccggaatgagagggttcttgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaaca 41754388  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  41754389 agatgcatcttcttttc 41754405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 18099024 - 18098913
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||||| | | |||| |||||||||||| |||||||||||| | ||||||||||||| ||||||||||| ||||||||||    
T  18099024 aatcacatcggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaaca 18098925  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  18098924 agatgcatcttc 18098913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 33174505 - 33174619
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | |||| ||||||| |||| ||  |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  33174505 aatcacatcggaatgagagggatcctgatgccgtgtaggtatgggactaca--gttgaaggaaggcttataagaattgtttggtactacctatatcaaca 33174602  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  33174603 agatgcatcttcttttc 33174619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 29804682 - 29804798
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | | || ||||||| |||| |||||||||||| ||||||||||||||| || |||||||| ||||||||||    
T  29804682 aatcacatcggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaaca 29804781  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  29804782 agatgcatcttcttttc 29804798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 309 - 416
Target Start/End: Original strand, 15619902 - 15620009
Alignment:
Q  309 acatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||| |||||||||||||||  | | |||||| |||||||||||||| |||||||| | ||||||||||||| ||||||||||| ||||||||||||||    
T  15619902 acatcagaatgagagggatcccgatgccgtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagat 15620001  T
Q  409 acatcttc 416  Q
    ||||||||    
T  15620002 acatcttc 15620009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 16379393 - 16379504
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| || ||||||||||||||||  | | |||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||    
T  16379393 aatcaaattggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatatcaaca 16379492  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  16379493 agatgcatcttc 16379504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 408
Target Start/End: Original strand, 82953 - 83120
Alignment:
Q  239 atgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgt 338  Q
    |||||| || ||| ||||| |||| ||| |||||||| | |||||||||| ||||||||||  |  |||||| ||| ||||||||||||||| |  | ||    
T  82953 atgtaacgcccgaagctgacgagggcggagagtggtctggctcctggcagcttctaggcaa--ctgaatcacgtcgaaatgagagggatcctgagattgt 83050  T
Q  339 gcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||||||||||| |||||||||||| | ||||||||||||  ||||||||||| |||| |||||||||    
T  83051 gcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagat 83120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 18448064 - 18447954
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||| ||||||||| | | |||| ||||||| |||| ||||||||||| ||| |||||||||||| ||||||||||||| ||||||||    
T  18448064 aatcacatcggaatgatagggatcctgaggccgtgtaggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaaca 18447965  T
Q  405 agatacatctt 415  Q
    |||| ||||||    
T  18447964 agatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 8256534 - 8256642
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||| | ||| | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  8256534 cggaatgagagggatcttgaagccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 8256633  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  8256634 cttcttttc 8256642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 20502023 - 20502126
Alignment:
Q  307 tcacatcggaatgagagggatcctaaa--gtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| ||||||||||||||||| |||  |||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||   ||||||||||    
T  20502023 tcacaccggaatgagagggatcccaaaaggtcgtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaaca 20502122  T
Q  405 agat 408  Q
    ||||    
T  20502123 agat 20502126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 1912525 - 1912636
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | ||  || |||||||||||| |||||||||| | ||  ||||||||||| ||||||||||| ||||||||||    
T  1912525 aatcacatcggaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaaca 1912624  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  1912625 agatgcatcttc 1912636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 306 - 416
Target Start/End: Original strand, 16378938 - 16379048
Alignment:
Q  306 atcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaa 405  Q
    |||||| ||||||||||||||| |  | | |||||| |||||||||||||||||||||||||| |||||| ||||| |||| |||||| |||||||||||    
T  16378938 atcacaccggaatgagagggattccgaggccgtgcaagtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaa 16379037  T
Q  406 gatacatcttc 416  Q
    ||| |||||||    
T  16379038 gatgcatcttc 16379048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 414
Target Start/End: Complemental strand, 25434202 - 25434093
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||| | | ||||| |||||| |||| |||||||||||||||||||||||||||| |||| ||| || | ||||||||    
T  25434202 aatcacaccggaatgagagggatcctgaggccgtgctggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaaca 25434103  T
Q  405 agatacatct 414  Q
    |||| |||||    
T  25434102 agatgcatct 25434093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 11388189 - 11388303
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||||| | | |||| |||||||||||| |||||||||||||| ||||| || |||| ||||||||||| ||||||||||    
T  11388189 aatcacatcggaatgagagg-atcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaaca 11388286  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  11388287 agatgcatcttcttttc 11388303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 1707042 - 1707152
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||||| |    ||| |||||||||||| |||| |||||||||| |||||||||||| ||||||||||| ||||||||||    
T  1707042 aatcacatcggaatgagagg-atcctgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaaca 1707140  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  1707141 agatgcatcttc 1707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 27883072 - 27882961
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| || ||||||||||||||| | | |||||| |||||||||||||| |||||||||| ||||||||||||| ||||||| ||  |||||||| |    
T  27883072 aatcacaccgaaatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaata 27882973  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  27882972 agatgcatcttc 27882961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 416
Target Start/End: Complemental strand, 30963857 - 30963755
Alignment:
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatc 413  Q
    ||||||||||||||| | ||| |||||||||| |||| ||||||||||||||||  |||||||||||| | |||| |||| |||||||||||||| ||||    
T  30963857 ggaatgagagggatcatgaagccgtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatc 30963758  T
Q  414 ttc 416  Q
    |||    
T  30963757 ttc 30963755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 33771037 - 33771117
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||| ||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  33771037 aggtatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttc 33771117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 38899058 - 38898955
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||| ||||| |||| | | | |||| |||||| ||||| |||||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  38899058 aatcacatcggaaggagagtgatcttgaggccgtgtaggtatcagactacatggttgaaggagagcttataagaattgtttggtactacctatatcaaca 38898959  T
Q  405 agat 408  Q
    ||||    
T  38898958 agat 38898955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 415
Target Start/End: Complemental strand, 30963407 - 30963299
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaag 406  Q
    ||||||| |||||||||||||| | ||| ||  || ||||  || |||||| ||||||||||||||||||||||| || |||||||| ||||||||||||    
T  30963407 tcacatcagaatgagagggatcatgaagccgcacatgtatatgaatgcatgattgaaggaaggcttataagaattgttaggtactacctatatcaacaag 30963308  T
Q  407 atacatctt 415  Q
    || ||||||    
T  30963307 atgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 13191010 - 13191085
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||||| ||||||||||||| ||||||| |||||||||||| ||||||||||| |||| ||||||||| |||||||    
T  13191010 aggtataagactgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttc 13191085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 421
Target Start/End: Original strand, 11394566 - 11394650
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||| |||||||||||| |||||||||||||| ||||| || |||| ||||||||||| |||||||||||||| ||||||| ||||    
T  11394566 cgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttc 11394650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 408
Target Start/End: Complemental strand, 30962111 - 30961926
Alignment:
Q  231 tggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcct 330  Q
    ||||||| |||||| || ||||||||   |||  |||||||||| |  |||||||||| ||||||| ||||   ||||||||| ||||||||| ||||||    
T  30962111 tggtgggcatgtaacgcccgaggctgtcaagggtggggagtggttcagctcctggcagcttctaggaaaaatcgaatcacatcagaatgagagagatcct 30962012  T
Q  331 aaagtcgtgcaggtatgagactgcatggttga--------aggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
     ||| |||| ||||||| || |||||||||||        |||||| ||||||||| ||  |||||||||| ||||||||||||||    
T  30962011 gaagccgtgtaggtatgggattgcatggttgaaggatttaaggaagtcttataagatttgattggtactacctatatcaacaagat 30961926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 16541985 - 16542088
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||| |||||||| | ||  ||| ||||||||  || ||||||||||||||| ||||||| |||| ||| ||||||| ||||||||||    
T  16541985 aatcacatcagaatgatagggatcccagagctgtgtaggtatgactctacatggttgaaggaagacttataataattgttttgtactacctatatcaaca 16542084  T
Q  405 agat 408  Q
    ||||    
T  16542085 agat 16542088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 36924519 - 36924457
Alignment:
Q  356 tggttgaaggaaggcttataagaattttttggtactact--tatatcaacaagatacatcttc 416  Q
    |||||||||||||||||||||||||| ||||||| ||||  |||||||||||||| |||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttc 36924457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 416
Target Start/End: Original strand, 8073902 - 8074003
Alignment:
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||| | |  | ||||||||||| | ||  | ||||||||| || |||||||||||| ||||||||||| |||| ||||||||| |||||    
T  8073902 gaatgagagggatcatgagattgtgcaggtatgggtctataaggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatct 8074001  T
Q  415 tc 416  Q
    ||    
T  8074002 tc 8074003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 8181446 - 8181394
Alignment:
Q  356 tggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 15639781 - 15639845
Alignment:
Q  352 tgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    ||||| |||||||| | ||||||| ||||| ||||||||||| ||||||||||| ||||||||||    
T  15639781 tgcatagttgaaggcacgcttataggaattgtttggtactacctatatcaacaacatacatcttc 15639845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 35494341 - 35494434
Alignment:
Q  41 aattctacttgatcaacaact-aaaaattgctaaactacattttcaaaccctcaaccaattctacttgatcgacaactaaaaactccaaccttcaa 135  Q
    ||||||||||||||||||||| |||||||  |||||||||  ||||||||||  || | || ||||| ||| |||||||||||||| |||||||||    
T  35494341 aattctacttgatcaacaactaaaaaattcataaactaca--ttcaaaccctatacaatttatacttaatcaacaactaaaaactctaaccttcaa 35494434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 9909102 - 9909195
Alignment:
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||||||||||||| || ||||  | ||||||||||  |||||||||||| || ||||||  |||  |||||||||| |||| |||||||||    
T  9909102 gaatgagagggatcctgaaatcgtataagtatgagactatatggttgaaggagggtttataatgattaattggtactacctataccaacaagat 9909195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 216 - 416
Target Start/End: Complemental strand, 142510 - 142309
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||| | ||||||| |||||  ||||||||||    
T  142510 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgaggacggggagtggtccggctcctggcatgcttctaggaaaaactgaatcacatcg 142411  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | |||||||||||| |||| |||||||||||||| | ||||||||||| ||||||||||| |||||||||||||| |||||    
T  142410 gaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatct 142311  T
Q  415 tc 416  Q
    ||    
T  142310 tc 142309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 25147446 - 25147652
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||  ||||||||||    
T  25147446 tgtaacgcctccgcttggtgggcatgtaacactcgaggctgatgagggcggggagtggtccggctcttggcatgcttctaggcaaaactaaatcacatcg 25147545  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||| ||||||||    ||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||    
T  25147546 gaatgagagagatcctaagactgtgtaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatct 25147645  T
Q  415 tcatttc 421  Q
    || ||||    
T  25147646 tcttttc 25147652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 422
Target Start/End: Complemental strand, 27819481 - 27819275
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||||||| ||||||||||| |||||| |||||||| ||||||||   || ||||||||||||||||| || || ||||||||||  ||||||||| |    
T  27819481 tgtaacgcctccgcttggtgggcatgtaaggctcgaggttgatgagggtaggaagtggtccgactcctggaagcttttaggcaaaaccgaatcacatcag 27819382  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||| | ||||| |||| |||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||| || ||||||    
T  27819381 aatgagagggatcatgaagtcatgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatctt 27819282  T
Q  416 catttca 422  Q
    | |||||    
T  27819281 cttttca 27819275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 34308715 - 34308509
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || |||||||||| ||| |||||||||||||| ||||||||  | |||||||||||||  ||||||||||    
T  34308715 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgataagggcggggagtggtccggctcctggcgtgcttctaggcaaaactgaatcacatcg 34308616  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||| ||||||||| | | ||| || ||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||||| |||||    
T  34308615 gaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatct 34308516  T
Q  415 tcatttc 421  Q
    || ||||    
T  34308515 tcttttc 34308509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 215 - 421
Target Start/End: Complemental strand, 34309176 - 34308965
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatc 313  Q
    ||||||||||| ||||||||||| |||||| || |||||||||||||| || ||||||||||| ||||||||| | |||||||||||||  |||||||||    
T  34309176 ttgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcgaggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 34309077  T
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactac----ttatatcaacaagata 409  Q
    ||||||||||||||||| | | ||| || ||||||||||| ||||||||||||||||||||||||| | |||||||||||     ||||||||||||||     
T  34309076 ggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatg 34308977  T
Q  410 catcttcatttc 421  Q
    ||||||| ||||    
T  34308976 catcttcttttc 34308965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 216 - 415
Target Start/End: Original strand, 22705090 - 22705282
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||||||| |||| |||||| |||||| |||||||||||||||||||||||||||||| | |||||||||| ||| |||||||||  ||       ||    
T  22705090 tgtaacgcctccgctcggtgggcatgtaacgctcgaggctgatgaggacggggagtggtcaggctcctggcagcttcaaggcaaaaccgaa-------gg 22705182  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||||| ||| |||| ||||||| ||||| ||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||    
T  22705183 aatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 227 - 421
Target Start/End: Original strand, 25144693 - 25144888
Alignment:
Q  227 cgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagaggg 325  Q
    |||||||| || |||||| | ||||||||||||||| |||||||||||| | ||||||||| | |||||||||||||  ||||||||| ||||||||| |    
T  25144693 cgcttggtaggcatgtaacgttcgaggctgatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcacatcagaatgagagag 25144792  T
Q  326 atcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||   | |||||||||||||| || |||||| ||||||| ||||||||||||||| ||||||||||| ||||||| |||||| ||||||| ||||    
T  25144793 atctcgaggtcgtgcaggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttcttttc 25144888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 12100602 - 12100807
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| |||| |||| | ||||||  | |||||||||||||| |||||||||||||||||||||||| | ||||||| |||||  ||||||||||    
T  12100602 tgtaacgcctccgctcggtgtgcatgtaacacccgaggctgatgagggcggggagtggtccgactcctggcatgcttctaggaaaaactgaatcacatcg 12100701  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
     ||||||| | ||||| | | ||| |||||||||||||||||||||||||| | |||||||||| || ||||||||||| |||||||| ||||| |||||    
T  12100702 aaatgagaag-atcctgaggccgtacaggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatct 12100800  T
Q  415 tcatttc 421  Q
    || ||||    
T  12100801 tcttttc 12100807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 422
Target Start/End: Complemental strand, 21316346 - 21316138
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatc 313  Q
    ||||||| ||| ||||||||||| |||||| || |||||||||||||| |||||||||||||| || |||||| |  |||||| ||||   |||||||||    
T  21316346 ttgtaacacctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggcttctggcaagcatctaggaaaaattgaatcacatc 21316247  T
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatc 413  Q
    |  |||||||||||||||| | |||||||||||||||||| |||||| || ||  ||||| ||||||| ||||||||||| |||||||||||||| ||||    
T  21316246 gcgatgagagggatcctaaggccgtgcaggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaacaagatgcatc 21316147  T
Q  414 ttcatttca 422  Q
     || |||||    
T  21316146 gtcttttca 21316138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 41659251 - 41659135
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  41659251 aatcacaccggaatgagagggttcctgatgtcgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 41659152  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  41659151 agatgcatcttcttttc 41659135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 10844883 - 10844999
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  10844883 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 10844982  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  10844983 agatgcatcttcttttc 10844999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 27925899 - 27926015
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  27925899 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaaca 27925998  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  27925999 agatgcatcttcttttc 27926015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 421
Target Start/End: Original strand, 25147892 - 25148083
Alignment:
Q  231 tggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcc 329  Q
    ||||||| |||||| |||||||  |||||||| |||||||||||  | ||||||||| | |||||||||||||  ||||||||  |||||||||||||||    
T  25147892 tggtgggcatgtaacgctcgagtatgatgagggcggggagtggtttggctcctggcatgcttctaggcaaaactgaatcacataagaatgagagggatcc 25147991  T
Q  330 taaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
      | |||||| ||||||| |||||  | |||||||||||||||||||||||| ||||||  ||| |||||||||||||| ||| ||| ||||    
T  25147992 cgaggtcgtgtaggtatgggactgtgtcgttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatattcttttc 25148083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 315 - 421
Target Start/End: Complemental strand, 27022015 - 27021909
Alignment:
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | | || |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  27022015 gaatgagagggatcctgaggccatgtaggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatct 27021916  T
Q  415 tcatttc 421  Q
    || ||||    
T  27021915 tcttttc 27021909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 316 - 421
Target Start/End: Complemental strand, 28375189 - 28375084
Alignment:
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatctt 28375090  T
Q  416 catttc 421  Q
    | ||||    
T  28375089 cttttc 28375084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 300 - 408
Target Start/End: Original strand, 2044053 - 2044161
Alignment:
Q  300 aacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatat 399  Q
    |||| |||||||||||||||||||||||||| | |  ||| |||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||    
T  2044053 aacagaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatat 2044152  T
Q  400 caacaagat 408  Q
    |||||||||    
T  2044153 caacaagat 2044161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 22026379 - 22026495
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| || | | | |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  22026379 aatcacaccggaatgagagggttcgtgaggccgtgcaggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctatatcaaca 22026478  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  22026479 agatgcatcttcttttc 22026495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 8080488 - 8080385
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| ||| |||| ||||||| |||| |||||||||||||| ||| ||||||||| ||||||||||| ||||||||||    
T  8080488 aatcacatcggaatgagagggatcctgaagccgtgtaggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaaca 8080389  T
Q  405 agat 408  Q
    ||||    
T  8080388 agat 8080385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 22548696 - 22548579
Alignment:
Q  304 taatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaac 403  Q
    |||||||| ||||||||||||| |||| | |  ||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  22548696 taatcacaccggaatgagagggttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaac 22548597  T
Q  404 aagatacatcttcatttc 421  Q
    ||||| ||||||| ||||    
T  22548596 aagatgcatcttcttttc 22548579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 22549141 - 22549025
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||  |||| | |  ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  22549141 aatcacaccggaatgagaggcttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 22549042  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  22549041 agatgcatcttcttttc 22549025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 310 - 421
Target Start/End: Original strand, 17103086 - 17103197
Alignment:
Q  310 catcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagata 409  Q
    |||||||||||||| |||||| | | ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||| |     
T  17103086 catcggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctg 17103185  T
Q  410 catcttcatttc 421  Q
    ||||||| ||||    
T  17103186 catcttcttttc 17103197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 421
Target Start/End: Complemental strand, 10844758 - 10844645
Alignment:
Q  308 cacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaaga 407  Q
    |||| ||||||||||||| |||| | | | |||||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||    
T  10844758 cacaccggaatgagagggttcctgaggccttgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaacaaga 10844659  T
Q  408 tacatcttcatttc 421  Q
    | ||||||| ||||    
T  10844658 tgcatcttcttttc 10844645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 32292397 - 32292508
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||    
T  32292397 aatcacaccggaatgagagggttcctgaggccgtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaaca 32292496  T
Q  405 agatacatcttc 416  Q
    || | |||||||    
T  32292497 agttgcatcttc 32292508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 27022484 - 27022374
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | | | || ||||||| |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  27022484 aatcacatcggaatgagagggatcttgaggccatgtaggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaaca 27022385  T
Q  405 agatacatctt 415  Q
    | || ||||||    
T  27022384 acatgcatctt 27022374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 421
Target Start/End: Complemental strand, 12827392 - 12827284
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||||| | | | || ||||||| |||| | |||||||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  12827392 cggaatgagagggatcctgaggccttgtaggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 12827293  T
Q  413 cttcatttc 421  Q
    |||| ||||    
T  12827292 cttcttttc 12827284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 6465056 - 6464953
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| ||||||||||| ||| | | | |||| |||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  6465056 aatcacattggaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 6464957  T
Q  405 agat 408  Q
    ||||    
T  6464956 agat 6464953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 28453338 - 28453449
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||  | ||||||||||||||||||| |||||||||| |||  |||||||||||| |||  |||||| ||||| ||||    
T  28453338 aatcacaccggaatgagagggatcccgaggtcgtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaaca 28453437  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  28453438 agatgcatcttc 28453449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 22840675 - 22840564
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||| |||||| | |   || |||||||||||| |||||| ||| |||| |||||||||||| ||||||||||  ||||||||||    
T  22840675 aatcacatcggaatgagagagatcctgaggctttgtaggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaaca 22840576  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  22840575 agatgcatcttc 22840564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 33852404 - 33852301
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| | |||||||||||||||  |   |||||||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||| ||||    
T  33852404 aatcacaccagaatgagagggatcccgagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaaca 33852305  T
Q  405 agat 408  Q
    ||||    
T  33852304 agat 33852301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 361
Target Start/End: Original strand, 9250913 - 9251057
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||| ||| |||||||||| ||||||| | ||||||||||||| | || ||||||||| | ||||| |||  || ||||||||||  ||||||||| |    
T  9250913 tgtaacacctccgcttggtggatatgtaacgttcgaggctgatgaaggcgaggagtggtctgcctcctagcaacttttaggcaaaaccgaatcacatcag 9251012  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttg 361  Q
    ||||||||||||||| ||| | |  ||||||| |||||||||||||    
T  9251013 aatgagagggatcctgaag-cctagaggtatgggactgcatggttg 9251057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 30335054 - 30334938
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||| ||| ||||||| |    ||||||||||| ||||||| ||||||| |||| ||||||| |||| |||| |||||| |||| |||||    
T  30335054 aatcacatcggaattagatggatcctgagactgtgcaggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctataccaaca 30334955  T
Q  405 agatacatcttcatttc 421  Q
    |||||||||||| ||||    
T  30334954 agatacatcttcttttc 30334938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 15567702 - 15567591
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||| |||| | |  ||| ||| |||| ||||  |||||| ||||||||||||||||||||| ||||  ||||| |||| |||||    
T  15567702 aatcacatcggaatgagagagatcttgacatcgcgcaagtattagacatcatggtggaaggaaggcttataagaattgtttgacactacatataccaaca 15567603  T
Q  405 agatacatcttc 416  Q
    ||||||||||||    
T  15567602 agatacatcttc 15567591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 1297040 - 1297110
Alignment:
Q  338 tgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||| |||| |||||||||    
T  1297040 tgcaggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctataccaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 41913003 - 41913073
Alignment:
Q  338 tgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||| |||||| |||| ||||||||||||||    
T  41913003 tgcaggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagat 41913073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 416
Target Start/End: Original strand, 3745104 - 3745212
Alignment:
Q  308 cacatcggaatgagagggatcctaaagtcgtgcagg-tatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaag 406  Q
    ||||||| ||||||||||||||||| |||||||||| || | |||| ||||||||||||||  |||||||||| | ||| ||||||| |||| ||||||     
T  3745104 cacatcgaaatgagagggatcctaaggtcgtgcaggctaag-gactacatggttgaaggaaaacttataagaactgtttagtactacctataccaacaat 3745202  T
Q  407 atacatcttc 416  Q
    || |||||||    
T  3745203 atgcatcttc 3745212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 17429501 - 17429613
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||| | |   ||||||  |||| |||||||| ||||||||||| ||||| || ||| ||||||||||| ||||||||||    
T  17429501 aatcacatcggaatgagagg-atcttgagaccgtgcatatatgtgactgcattgttgaaggaagacttatgagtattatttggtactacctatatcaaca 17429599  T
Q  405 agatacatcttcat 418  Q
    ||||  ||||||||    
T  17429600 agatgtatcttcat 17429613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 405
Target Start/End: Original strand, 3744667 - 3744738
Alignment:
Q  334 gtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaa 405  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||||| ||||  ||||| |||| ||||||    
T  3744667 gtcgtgtaggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaa 3744738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 29971547 - 29971450
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaa 402  Q
    ||||||||| ||||  || ||||||| | | |||| |||||||||||| |||||||||||||||  ||||||||||| |||| |||||  ||||||||    
T  29971547 aatcacatcagaattggaaggatcctgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 36968503 - 36968438
Alignment:
Q  343 gtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||| |||| |||||||||||| | ||||||||||||  ||||| |||||||||||||||||||    
T  36968503 gtatgaaactgtatggttgaaggatgacttataagaattgattggtgctacttatatcaacaagat 36968438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 421
Target Start/End: Complemental strand, 15819121 - 15819045
Alignment:
Q  345 atgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||  |||||||||||||| ||||| || |||| ||||||||||| |||||||||| ||| ||||||| ||||    
T  15819121 atgagacaacatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttc 15819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 31283432 - 31283365
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcct 283  Q
    |||||||||| ||||||||||| |||||| || ||||||||||||||  || |||||||||| |||||    
T  31283432 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggtggagagtggtccggctcct 31283365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 30527589 - 30527517
Alignment:
Q  343 gtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    ||||||||||||||| |||||  | | |||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  30527589 gtatgagactgcatgtttgaacca-gacttataagaattgtttggtaccacttacatcaataagatacatcttc 30527517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 6466686 - 6466820
Alignment:
Q  279 ctcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 378  Q
    |||||| ||| ||| ||||||| || ||||| ||| ||||||||||||| || |    |||| ||||||  ||||||||||| ||||| | ||||||| |    
T  6466686 ctcctgacagcttccaggcaaacca-aatcatatcagaatgagagggattctgagactgtgcgggtatggaactgcatggttaaagga-gacttataaaa 6466783  T
Q  379 attttttggtactacttatatcaacaagatacatctt 415  Q
    ||| ||||||||||| |||| ||||||||| ||||||    
T  6466784 attgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 25307765 - 25307829
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaagg 369  Q
    |||||||  |||||||||| ||| | || | |||||||||||||||||| |||||||||||||||    
T  25307765 aatcacactggaatgagagcgattccaaggccgtgcaggtatgagactgtatggttgaaggaagg 25307829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 15568100 - 15568041
Alignment:
Q  356 tggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||| ||||||| |||| |||||||  || |||||||||||||| ||||||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 23350513 - 23350307
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||  ||||||||||    
T  23350513 tgtaacgcctccgcttggtgggcatgtaacgctcgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 23350414  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||| |||| | | | ||| |||||| | ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||    
T  23350413 gaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatct 23350314  T
Q  415 tcatttc 421  Q
    || ||||    
T  23350313 tcttttc 23350307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 216 - 408
Target Start/End: Original strand, 35871538 - 35871731
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||| | |||||||||||||  ||||||||||    
T  35871538 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 35871637  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    |||||||||||||||| | | ||| |||||||| |||| |||||||||||||||||||||| ||||| |||||||| || ||||||||||||||    
T  35871638 gaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctatatcaacaagat 35871731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 49998546 - 49998752
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| | ||||||||| |||||| |||| |||||||||||| |||||||||||||  ||| ||||| | |||||| ||||||  ||||||||||    
T  49998546 tgtaacgcctccccttggtgggcatgtaaagctcaaggctgatgagggcggggagtggtccagctcttggcatgcttctagacaaaactaaatcacatcg 49998645  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||||| |  ||| ||| ||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||||    
T  49998646 gaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatct 49998745  T
Q  415 tcatttc 421  Q
    || ||||    
T  49998746 tcttttc 49998752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 217 - 422
Target Start/End: Complemental strand, 27579137 - 27578932
Alignment:
Q  217 gtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgga 316  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||||||||| || ||| ||||||| |||||  ||||||||||||    
T  27579137 gtaacgccttcgtttggtgggcatgtaatgctcgaggctggtgagggtggggagtggtccgactcttgacagcttctaggtaaaaccgaatcacatcgga 27579038  T
Q  317 atgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    || ||||||||| |||||||||| |||||||| ||| | |||||||  |||| |||||||||||| ||||||||||| ||||||||  ||| ||||||||    
T  27579037 ataagagggatcttaaagtcgtgtaggtatgacactacttggttgactgaagacttataagaattgtttggtactacatatatcaattagacacatcttc 27578938  T
Q  417 atttca 422  Q
     |||||    
T  27578937 ttttca 27578932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 228 - 421
Target Start/End: Complemental strand, 44471543 - 44471349
Alignment:
Q  228 gcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagaggga 326  Q
    |||||||||| |||||| || |||||||||||||| |||||||||||||| ||||| ||| | ||||||| |||||  ||||||||||||||||||| ||    
T  44471543 gcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctagcatgcttctaggaaaaactgaatcacatcggaatgagagaga 44471444  T
Q  327 tcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    || | | | ||| ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  44471443 tcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttc 44471349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 216 - 415
Target Start/End: Original strand, 13266002 - 13266196
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||||||| ||||||||||| |||||| ||||||||||| |||||     ||||||||||||| ||||||  |||| |||||||   ||||||||  |    
T  13266002 tgtaacgcctccgcttggtgggcatgtaacgctcgaggctggtgagg-----gagtggtccgacttctggcaacttctgggcaaaattgaatcacattag 13266096  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||| ||||| |||||||||||| || ||||||||||||||||||||||||| |||||||| ||||| | |||||||| ||||| ||||||    
T  13266097 aatgagagggatcttaaagccgtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaataagatgcatctt 13266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 27578683 - 27578481
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||| ||| ||||||||||| ||||||  |||||||||||||||| ||||||| |||||| |||||||||| |||||||||||||  ||||| ||| |    
T  27578683 tgtaacacctccgcttggtgggcatgtaacactcgaggctgatgagggcggggagcggtccggctcctggcagcttctaggcaaaaccgaatcatatcag 27578584  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||| ||   || |||||||| |||| ||||||||  |||||||| || || ||||||||||| |||||| |||| |||||||||||||| ||||||    
T  27578583 aatgagatgg---ctgaagtcgtggaggtgtgagactgtgtggttgaatgatggtttataagaattatttggtgctacctatatcaacaagatgcatctt 27578487  T
Q  416 catttc 421  Q
    | ||||    
T  27578486 cttttc 27578481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 15306326 - 15306115
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcgg 315  Q
    |||||||||| ||||||||||| |||||| || |||||||||||||| || ||||||||| | |||||||||| |||||||||||||| || |||||| |    
T  15306326 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcgaggagtggtctggctcctggcagcttctaggcaaaacagaaccacatcag 15306227  T
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaatt------ttttggtactacttatatcaacaagata 409  Q
    ||||||||||||||| | |  ||| ||||||| |||| |||||| ||| |||| ||||||||| ||      |||||||||||| ||||| ||||||||     
T  15306226 aatgagagggatcctgaggctgtgtaggtatgggactacatggtcgaaagaagacttataagatttgagcaattttggtactacctatataaacaagatg 15306127  T
Q  410 catcttcatttc 421  Q
    ||||||| ||||    
T  15306126 catcttcttttc 15306115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 240 - 416
Target Start/End: Complemental strand, 44471080 - 44470903
Alignment:
Q  240 tgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgt 338  Q
    ||||| || ||||||| |||||| |||||||||||||| ||||| ||| | |||||||||||||  ||||||||||||||||||| |||| | | |  ||    
T  44471080 tgtaacgcccgaggctaatgagggcggggagtggtccggctcctagcatgcttctaggcaaaactgaatcacatcggaatgagagagatcatgacgctgt 44470981  T
Q  339 gcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
     || ||||| ||||| ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  44470980 acaagtatgtgactgtatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 44470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 12692139 - 12692023
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  12692139 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 12692040  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  12692039 agatgcatcttcttttc 12692023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 50398678 - 50398562
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | |||| ||||||  |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  50398678 aatcacatcggaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 50398579  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  50398578 agatgcatcttcttttc 50398562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 9423998 - 9423887
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||| | |||||||| ||||| ||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||    
T  9423998 aatcacaccggaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaaca 9423899  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  9423898 agatgcatcttc 9423887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 416
Target Start/End: Complemental strand, 14572345 - 14572179
Alignment:
Q  251 aggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacat-aatcacatcggaatgagagggatcctaaagtcgtgcaggtatga 348  Q
    |||||||||||| |||||||||||||| ||| ||||| |  |||||  |||| || |||||||||||||||||||||||||| | | | || |||||||     
T  14572345 aggctgatgagggcggggagtggtccggctcttggcatgcatctaga-aaaatatgaatcacatcggaatgagagggatcctgaggccatgtaggtatgg 14572247  T
Q  349 gactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  14572246 gactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 14572179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 249 - 422
Target Start/End: Complemental strand, 14571918 - 14571744
Alignment:
Q  249 cgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatg 347  Q
    |||||||||||||| |||||||||||||| ||||||||  | ||||||| |||||  |||||||||  ||||| ||||||| | |   |||| |||||||    
T  14571918 cgaggctgatgagggcggggagtggtccggctcctggcttggttctaggaaaaactgaatcacatcataatgaaagggatcttgagtccgtgtaggtatg 14571819  T
Q  348 agactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttca 422  Q
     |||| |||||||||||| | ||||||||||||| ||||||||||| |||||||||||||| ||||||| |||||    
T  14571818 ggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttca 14571744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 4128029 - 4127913
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | | || ||| ||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  4128029 aatcacatcggaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 4127930  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  4127929 agatgcatcttcttttc 4127913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 24629573 - 24629457
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | |||||| ||||||| |||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||    
T  24629573 aatcacaccggaatgagagggttcctgaggtcgtgtaggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaaca 24629474  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  24629473 agatgcatcttcttttc 24629457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 50399133 - 50399017
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| |   |||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  50399133 aatcacatcggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 50399034  T
Q  405 agatacatcttcatttc 421  Q
     ||| ||||||| ||||    
T  50399033 cgatgcatcttcttttc 50399017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 51331421 - 51331305
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||| | | | |||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  51331421 aatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaaca 51331322  T
Q  405 agatacatcttcatttc 421  Q
    |||||||||||| ||||    
T  51331321 agatacatcttcttttc 51331305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 14351795 - 14351906
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| | |||||||||||||||| | |||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  14351795 aatcacaccagaatgagagggatcctgaggtcgtgcatgtatgagtctgcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaaca 14351894  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  14351895 agatgcatcttc 14351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 21067282 - 21067393
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||||  | |||||||| |||||||||||||||||||||||||| || |||| |||| ||||||||||| ||||||||||    
T  21067282 aatcacaccggaatgagagggatcccgaggtcgtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaaca 21067381  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  21067382 agatgcatcttc 21067393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 29628807 - 29628704
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||| ||||||||||||||| | | |||| |||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  29628807 aatcacatcgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 29628708  T
Q  405 agat 408  Q
    ||||    
T  29628707 agat 29628704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 4127577 - 4127461
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | | || ||||||| |||| ||| ||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  4127577 aatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaaca 4127478  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  4127477 agatgcatcttcttttc 4127461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 23942929 - 23942818
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||||||||||   | |||| |||||||  ||| |||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  23942929 aatcacatcggaatgagagggatcctggggccgtgtaggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 23942830  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  23942829 agatgcatcttc 23942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 215 - 422
Target Start/End: Original strand, 41869829 - 41870035
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcg 314  Q
    ||||||||||| ||||||||||  |||||| |||| |||||| ||| |  |||||||||| || ||||||  || |||||||||||||  ||||||||||    
T  41869829 ttgtaacgcctccgcttggtggacatgtaacgctcaaggctggtgacgg-ggggagtggtacgtctcctgtaagcttctaggcaaaactaaatcacatcg 41869927  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    || ||||||||||||| |    || ||  |||| ||||||||| |||||||||| |||||||||||| | || |||||| |||||||||||||  |||||    
T  41869928 gagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatgatactacctatatcaacaagacgcatct 41870027  T
Q  415 tcatttca 422  Q
    || |||||    
T  41870028 tcttttca 41870035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 31817992 - 31817876
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||| ||||||||  | | ||| |||| ||||| ||||||||||||||||||||||||||||||||| || |||||||| |||| |||||    
T  31817992 aatcacatcggaataagagggattatgaggtcatgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaaca 31817893  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  31817892 agatgcatcttcttttc 31817876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 1645889 - 1645778
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||| | | | |||| ||||||| |||| ||||||||||||||| |||||||||||| ||||||| ||| ||||||||||    
T  1645889 aatcacatcggaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaaca 1645790  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  1645789 agatgcatcttc 1645778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 3169206 - 3169317
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||| | | | |||| ||||||| |||| ||||||||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  3169206 aatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaaca 3169305  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  3169306 agatgcatcttc 3169317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 8467964 - 8467824
Alignment:
Q  279 ctcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 378  Q
    |||||||||| ||||||||||  |  || |||||| |||||| ||||||||| |    |||||||||||||||| ||||||||||||||| |||||||||    
T  8467964 ctcctggcagcttctaggcaa--ccgaaccacatcagaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataaga 8467867  T
Q  379 attttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||| ||||||||||| |||| ||||||||| ||||||| ||||    
T  8467866 attgtttggtactacctataccaacaagatgcatcttcttttc 8467824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 305 - 422
Target Start/End: Complemental strand, 24629120 - 24629000
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaa---ggcttataagaattttttggtactacttatatca 401  Q
    ||||||| ||||||||||||| |||| | | |||| ||||||| |||||||||||| ||||||   |||||||||||||| ||||||||||| |||||||    
T  24629120 aatcacaccggaatgagagggttcctgaggccgtgtaggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatca 24629021  T
Q  402 acaagatacatcttcatttca 422  Q
    ||||||| ||||||| |||||    
T  24629020 acaagatgcatcttcttttca 24629000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 21067765 - 21067841
Alignment:
Q  336 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||    
T  21067765 cgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagatacat 21067841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 21220471 - 21220360
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||| | | | | || |||||||| |||  ||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  21220471 aatcacatcagaatgagagggatcatgaggccatgtaggtatgaaactatatggttgaaggaatgcttataagaattgtttggtactacctatatcaaca 21220372  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  21220371 agatgcatcttc 21220360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 31817538 - 31817422
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||| ||| ||||||||| | | |||||||| |||||||||| |||||||||||||| | |||||| |||| ||||||||||| |||| |||||    
T  31817538 aatcacatcgaaataagagggatcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaaca 31817439  T
Q  405 agatacatcttcatttc 421  Q
    | || ||||||| ||||    
T  31817438 aaatgcatcttcttttc 31817422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 53854947 - 53854859
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactac 393  Q
    |||||||||||||||||||||||| | |||  ||| ||||||||||||  |||||||||||||| |||||||||||| |||||||||||    
T  53854947 aatcacatcggaatgagagggatcatgaagcagtgtaggtatgagactatatggttgaaggaagacttataagaattgtttggtactac 53854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 27029310 - 27029393
Alignment:
Q  338 tgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||| |||||||| || | |||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  27029310 tgcaggaatgagactacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttcttttc 27029393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 53996255 - 53996144
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||| ||||||| | |   || || |||| |||| |||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  53996255 aatcacatcggaatgagaaggatcctgaggctatgtagatatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaaca 53996156  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  53996155 agattcatcttc 53996144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 408
Target Start/End: Original strand, 17028849 - 17028977
Alignment:
Q  279 ctcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 378  Q
    ||||| |||| ||||||||||| |  |||||||||||||||||||||||||| ||| | |||| ||||| |||||||| ||||||||| |  || |||||    
T  17028849 ctccttgcagcttctaggcaaa-ctgaatcacatcggaatgagagggatcctgaagccttgcatgtatgggactgcatagttgaaggaggatttgtaaga 17028947  T
Q  379 attttttggtactacttatatcaacaagat 408  Q
    ||| || ||| |||| ||||||||||||||    
T  17028948 attgttaggtgctacctatatcaacaagat 17028977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 7678726 - 7678646
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||| | || |||||||||||||||||||||||||||| || |||||||| |||||||||||||| ||||||| ||||    
T  7678726 aggtatggggctacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttc 7678646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 316 - 416
Target Start/End: Complemental strand, 43929092 - 43928992
Alignment:
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    |||||||||| |||| ||| |||||||||||||||||   |||| ||||||| ||||| ||||||| ||||||||||| |||| ||||||||| ||||||    
T  43929092 aatgagagggttcctgaagccgtgcaggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatctt 43928993  T
Q  416 c 416  Q
    |    
T  43928992 c 43928992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 415
Target Start/End: Original strand, 27026535 - 27026613
Alignment:
Q  337 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||| |||| || | ||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||    
T  27026535 gtgcaggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt 27026613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 420
Target Start/End: Complemental strand, 52048804 - 52048691
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaag 406  Q
    |||| |||||||||||||| |||||| | ||| ||||||||| ||||||| | ||||||||   ||||||||||| |||| |||||| ||||  ||||||    
T  52048804 tcacgtcggaatgagagggttcctaaggccgtacaggtatgaaactgcatagctgaaggaaaatttataagaattgtttgatactacgtatactaacaag 52048705  T
Q  407 atacatcttcattt 420  Q
    || |||||||||||    
T  52048704 atgcatcttcattt 52048691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 1464147 - 1464263
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||| |     |||| |||||||||| | ||| |||||| |||  |||||||||||| ||||||||||| ||||||||||    
T  1464147 aatcacatcagaatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaaca 1464246  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  1464247 agatgcatcttcttttc 1464263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 392
Target Start/End: Complemental strand, 2499727 - 2499647
Alignment:
Q  312 tcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtacta 392  Q
    |||||||||||||||| |||||  ||||||||||||||||| ||||||||||| ||  ||||||| |||| ||||||||||    
T  2499727 tcggaatgagagggattctaaaaccgtgcaggtatgagacttcatggttgaagcaacacttataaaaattgtttggtacta 2499647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 17029334 - 17029433
Alignment:
Q  309 acatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||||||||||||||||||   | |||||||| ||||| |||||||| |||||| |||| ||| ||| |||| ||| ||||||| ||||||||||||||    
T  17029334 acatcggaatgagagggatctagaggtcgtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaacaagat 17029433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 17628560 - 17628627
Alignment:
Q  354 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||| ||||||| ||||    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttcttttc 17628627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 283 - 398
Target Start/End: Original strand, 17628946 - 17629061
Alignment:
Q  283 tggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattt 382  Q
    |||||| ||||||||||| |  |  |||||| ||||||| |||||||||| |||||||||||||| || || |||||||||  ||  ||||||||||||     
T  17628946 tggcagcttctaggcaaatcgaatccacatcagaatgagtgggatcctaaggtcgtgcaggtatgtgaatgtatggttgaataaaaacttataagaattg 17629045  T
Q  383 tttggtactacttata 398  Q
    ||||||||||| ||||    
T  17629046 tttggtactacctata 17629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 24271690 - 24271587
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtg--caggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||| |||| | ||||||  ||||||||||||| ||||||| ||| ||| | |||||||||| |||| |||||| ||||  ||||    
T  24271690 tcacatcggaatgagagggttcctgaggtcgtgtgcaggtatgagactacatggttaaagtaagacatataagaattatttgatactacctatacgaaca 24271591  T
Q  405 agat 408  Q
    ||||    
T  24271590 agat 24271587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 13614037 - 13613926
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||  ||||||||||||||||  | || ||||| | |||||||| |||||| ||||||   |||||||||||| |||| ||| || ||||||||||    
T  13614037 aatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaaca 13613938  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  13613937 agatgcatcttc 13613926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 354 - 416
Target Start/End: Complemental strand, 23943333 - 23943271
Alignment:
Q  354 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    ||||||||||||||| ||||||| || | ||||||||||| |||||||||||||| |||||||    
T  23943333 catggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttc 23943271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 412
Target Start/End: Original strand, 53391925 - 53391994
Alignment:
Q  343 gtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    |||||||||||||||||||||| || |||||||| |||| |||| ||| |  ||||||||||||||||||    
T  53391925 gtatgagactgcatggttgaagaaatgcttataaaaattgtttgataccatctatatcaacaagatacat 53391994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 404
Target Start/End: Original strand, 17506389 - 17506484
Alignment:
Q  309 acatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| |||||||||||||| | | ||| |||| |||||||| |||||| || || |||| |||||||||||| | | ||||||| ||||||||||    
T  17506389 acatcagaatgagagggatcatgaggtcatgcatgtatgagagtgcatgattaaaagaagacttataagaattgtatagtactacctatatcaaca 17506484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 23976323 - 23976248
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    ||||||| | ||||||| ||||||||||  ||||||||||| ||||||||||| ||||  |||||||| |||||||    
T  23976323 aggtatgggtctgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttc 23976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 416
Target Start/End: Original strand, 4185748 - 4185826
Alignment:
Q  338 tgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||||||||||||| |||||||| ||||||  | |||||||||| |||| ||| || |||| ||||||||| |||||||    
T  4185748 tgcaggtatgagacggcatggttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttc 4185826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 416
Target Start/End: Original strand, 4186176 - 4186278
Alignment:
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatc 413  Q
    |||||||||||| || ||| | | |||| ||||||||||  ||| || |||||| ||||||||||||  ||||||||||| || || |||||||| ||||    
T  4186176 ggaatgagagggttcgtaaggccatgcacgtatgagactaaatgtttaaaggaatgcttataagaatgatttggtactacctacatgaacaagattcatc 4186275  T
Q  414 ttc 416  Q
    |||    
T  4186276 ttc 4186278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 415
Target Start/End: Complemental strand, 20306241 - 20306191
Alignment:
Q  365 gaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||||||||||||||| ||||||||||  |||||||||||||| ||||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 33987239 - 33987164
Alignment:
Q  276 cgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagact 352  Q
    |||||| |||||| ||||||||||| |  |||||||||||||||||||||||| | |  ||||||||||||| ||||    
T  33987239 cgactcttggcagcttctaggcaaa-ctgaatcacatcggaatgagagggatcatgagatcgtgcaggtatgtgact 33987164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 34801450 - 34801394
Alignment:
Q  322 agggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 378  Q
    ||||||||||| |||||| ||||||||||||  || ||||||||| |||||||||||    
T  34801450 agggatcctaaggtcgtgtaggtatgagactatatagttgaaggagggcttataaga 34801394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 415
Target Start/End: Original strand, 42838661 - 42838733
Alignment:
Q  343 gtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    |||||||||| ||| ||| ||||||| | ||||| |||| ||||||||||| ||||||||||| || ||||||    
T  42838661 gtatgagactacatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 368
Target Start/End: Complemental strand, 2682770 - 2682707
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaag 368  Q
    |||||||||| ||||||||||||||| ||  |||||| ||||| || |||||| ||||||||||    
T  2682770 aatcacatcgaaatgagagggatcctgaaaccgtgcatgtatgtgattgcatgattgaaggaag 2682707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 50814899 - 50814849
Alignment:
Q  371 ttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||||||| ||||||||||  |||||||||||||| ||||||| ||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttc 50814849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 26200425 - 26200338
Alignment:
Q  307 tcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaagga--aggcttataagaattttttggtacta 392  Q
    ||||||| |||||||||||||||| |  | ||| ||||||| |||  |||||||||||||  |||||||||| |||| |||| |||||    
T  26200425 tcacatcagaatgagagggatcctgatattgtgtaggtatgggacatcatggttgaaggaagaggcttataacaattgtttgatacta 26200338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 35477803 - 35477855
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatg 357  Q
    ||||||||||||||||||| |||||| | | |||||| ||| |||||||||||    
T  35477803 aatcacatcggaatgagagagatcctgaggccgtgcaagtacgagactgcatg 35477855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 111; Significance: 7e-56; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 2446 - 2240
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    ||||| |||| |||||||||||||||||| || |||||||||||||| |||||||||||||  || || ||| | ||||||| |||||  ||||||||||    
T  2446 tgtaatgcctccgcttggtgggtatgtaacgcccgaggctgatgagggcggggagtggtccagcttctagcatgcttctaggaaaaactgaatcacatcg 2347  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||| ||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  2346 gaatgagaaggatcctaaggccgtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 2247  T
Q  415 tcatttc 421  Q
    || ||||    
T  2246 tcttttc 2240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 2606 - 2554
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacgggg 268  Q
    |||||||||| ||||||||||| |||||| || |||||||||||||| |||||    
T  2606 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcgggg 2554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 415
Target Start/End: Original strand, 10210 - 10410
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| |||||| || ||||||||||||||  ||||||||||||| ||||||||| | ||||||| |||||  ||||||||||    
T  10210 tgtaacgcctgcgcttggtgggcatgtaacgcccgaggctgatgagggtggggagtggtccggctcctggcatgcttctaggtaaaactgaatcacatcg 10309  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | |||||| ||||| |||||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||| |||||    
T  10310 gaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatct 10409  T
Q  415 t 415  Q
    |    
T  10410 t 10410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 230 - 421
Target Start/End: Complemental strand, 20061413 - 20061221
Alignment:
Q  230 ttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagt-ttctaggcaaaacataatcacatcggaatgagagggatc 328  Q
    |||||||| |||||| || |||||||||||||| |||||||||||||| ||| ||||| | |||||||| ||||  ||||||||| ||||||||||||||    
T  20061413 ttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcttggcaatcttctaggctaaactgaatcacatcagaatgagagggatc 20061314  T
Q  329 ctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    || | |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  20061313 ctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttc 20061221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 218 - 416
Target Start/End: Complemental strand, 35761148 - 35760949
Alignment:
Q  218 taacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcgga 316  Q
    |||||||| |||||||||||||||||| |  ||||||||||||||  || |||||||| | ||||||||| | ||||||| ||||   ||||||||||||    
T  35761148 taacgcctccgcttggtgggtatgtaacgtccgaggctgatgagggtggcgagtggtctggctcctggcatgcttctaggaaaaattgaatcacatcgga 35761049  T
Q  317 atgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  35761048 atgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 35760949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 35759844 - 35759638
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| | |||||||||||||||| || |||||||||||| | |||||||||||| | ||||| ||| | ||||||| ||||   ||||||||||    
T  35759844 tgtaacgcctccacttggtgggtatgtaacgcccgaggctgatgacggcggggagtggtctggctcctagcatgcttctaggaaaaattgaatcacatcg 35759745  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||    
T  35759744 gaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 35759645  T
Q  415 tcatttc 421  Q
    || ||||    
T  35759644 tcttttc 35759638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 249 - 421
Target Start/End: Complemental strand, 46693940 - 46693765
Alignment:
Q  249 cgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacat-aatcacatcggaatgagagggatcctaaagtcgtgcaggtat 346  Q
    |||||||||||||| |  ||||||||||||||| || || | ||||||||||||  | |||||||||||||||||||||||||||| |||||||| ||||    
T  46693940 cgaggctgatgagggctaggagtggtccgactcttgtcatgcttctaggcaaaagttgaatcacatcggaatgagagggatcctaaggtcgtgcatgtat 46693841  T
Q  347 gagactgc-atggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    | |||||  |||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||||| ||||    
T  46693840 gggactgtgatggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttcttttc 46693765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 416
Target Start/End: Original strand, 2328225 - 2328426
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| ||||||  | | |||||||||||| ||| |||||||| | ||||||||| | || ||||||||||  |||||||| |    
T  2328225 tgtaacgcctccgcttggtgggcatgtaacacccaaggctgatgagggcggagagtggtctggctcctggcatgcttttaggcaaaactgaatcacattg 2328324  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||  ||  | | | ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||    
T  2328325 gaatgagagaaattatgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatct 2328424  T
Q  415 tc 416  Q
    ||    
T  2328425 tc 2328426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20054226 - 20054110
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20054226 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20054127  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20054126 agatgcatcttcttttc 20054110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20054682 - 20054566
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20054682 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20054583  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20054582 agatgcatcttcttttc 20054566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20055138 - 20055022
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20055138 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20055039  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20055038 agatgcatcttcttttc 20055022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20055594 - 20055478
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20055594 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20055495  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20055494 agatgcatcttcttttc 20055478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20056050 - 20055934
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20056050 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20055951  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20055950 agatgcatcttcttttc 20055934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20056506 - 20056390
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20056506 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20056407  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20056406 agatgcatcttcttttc 20056390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20057409 - 20057293
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||| |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20057409 aatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 20057310  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20057309 agatgcatcttcttttc 20057293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 38340906 - 38341022
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||| || |||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  38340906 aatcacaccggaatgagatggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 38341005  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||||||||    
T  38341006 agatgcatcttcatttc 38341022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 43057669 - 43057553
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  43057669 aatcacatcggaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaaca 43057570  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  43057569 agatgcatcttcttttc 43057553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 227 - 408
Target Start/End: Original strand, 23180652 - 23180833
Alignment:
Q  227 cgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagaggga 326  Q
    ||||||||||| |||||| ||||| ||||||||| | |||||||||||||||||||| | || || |||| ||||   |||||||| |||||||||||||    
T  23180652 cgcttggtgggcatgtaacgctcgtggctgatgaaggcggggagtggtccgactcctagtagcttataggaaaaattgaatcacattggaatgagaggga 23180751  T
Q  327 tcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    || | ||| |||| ||| ||| |||| | |||||||||||| | |||||||||||  |||||||||| ||||||||||||||    
T  23180752 tcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaacaagat 23180833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20845807 - 20845691
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||| || |||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  20845807 aatcacaccggaatgagacggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaaca 20845708  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20845707 agatgcatcttcttttc 20845691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 50002853 - 50002737
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||||||||| |||||| | | |||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  50002853 aatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 50002754  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  50002753 agatgcatcttcttttc 50002737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 20057865 - 20057749
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| || |||||||||| |||| | | |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  20057865 aatcacaccgaaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaaca 20057766  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  20057765 agatgcatcttcttttc 20057749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 16907209 - 16907351
Alignment:
Q  279 ctcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 378  Q
    |||||||||| ||||||||||| || ||||| |||  ||||||||||||  | |    |||||||||||| |||||||||||||| ||||||||||||||    
T  16907209 ctcctggcagcttctaggcaaacca-aatcatatcaaaatgagagggattttgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataaga 16907307  T
Q  379 attttttggtactacttatatcaacaagatacatcttcatttca 422  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||    
T  16907308 attgtttggtactacctatatcaacaagatacatcttcttttca 16907351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 50002431 - 50002315
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | | |||| ||| ||| |||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  50002431 aatcacatcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaaca 50002332  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  50002331 agatgcatcttcttttc 50002315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 30873096 - 30872985
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| ||||||||||||||| || | | |||||||||||||||||| |||||||||||||| ||| |||||||| |||| |||||| ||||||||||    
T  30873096 aatcacaccggaatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatatcaaca 30872997  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  30872996 agatgcatcttc 30872985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 2634924 - 2635040
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||| | | || ||||||||||| ||||||||||||||||||   || ||||||||| ||||||||||| |||| |||||    
T  2634924 aatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctataccaaca 2635023  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  2635024 agatgcatcttcttttc 2635040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 16452079 - 16451963
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | | || ||||| | |||| |||||||||||||| ||||||||||||| || |||||||| ||||||||||    
T  16452079 aatcacatcggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaaca 16451980  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  16451979 agatgcatcttcttttc 16451963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 16461232 - 16461116
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | | || ||||| | |||| |||||||||||||| ||||||||||||| || |||||||| ||||||||||    
T  16461232 aatcacatcggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaaca 16461133  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  16461132 agatgcatcttcttttc 16461116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 31822809 - 31822693
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| |||||||||||||| | | | |||| |||||||||||| |||||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  31822809 aatcacatcagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaaca 31822710  T
Q  405 agatacatcttcatttc 421  Q
    | || ||||||| ||||    
T  31822709 atatgcatcttcttttc 31822693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 43057210 - 43057095
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||| ||||||| |||||||||| | |||| ||||||| |||| |||||||||||||||||||| ||||||| |||| |||||| ||||||||||    
T  43057210 aatcacatcagaatgag-gggatcctaaggccgtgtaggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaaca 43057112  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  43057111 agatgcatcttcttttc 43057095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 422
Target Start/End: Complemental strand, 50003221 - 50003104
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | | |||||||||  |||||||||||| |||| || ||||||| |||| || |||||||| ||||||||||    
T  50003221 aatcacatcggaatgagagggatcctgaggccatgcaggtataggactgcatggttaaagggagacttataataattgttgggtactacctatatcaaca 50003122  T
Q  405 agatacatcttcatttca 422  Q
    |||| ||||||| |||||    
T  50003121 agatgcatcttcttttca 50003104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 52250206 - 52250322
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||||||||| | | | | || ||||||| |||| |||||| ||||||||||||||||||||| || |||||||| ||||||||||    
T  52250206 aatcacaccggaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaaca 52250305  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  52250306 agatgcatcttcttttc 52250322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 20056926 - 20056846
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||| ||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  20056926 aggtatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttcttttc 20056846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 12883524 - 12883627
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||| ||||||  | |  ||||||||||| ||||||||| |||||||||  |||||||||||| ||||||||||| ||||||||||    
T  12883524 aatcacaccggaatgagatggatcccgaggctgtgcaggtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaaca 12883623  T
Q  405 agat 408  Q
    ||||    
T  12883624 agat 12883627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 315 - 415
Target Start/End: Complemental strand, 51373010 - 51372910
Alignment:
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||  | | | | |||||||| ||||| ||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| |||||    
T  51373010 gaatgagagggatcccgaggccatacaggtatgtgactgtatggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatct 51372911  T
Q  415 t 415  Q
    |    
T  51372910 t 51372910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 10820636 - 10820702
Alignment:
Q  349 gactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    |||| |||||||||||||||  ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  10820636 gactacatggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatctt 10820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 421
Target Start/End: Complemental strand, 20060431 - 20060370
Alignment:
Q  360 tgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttc 421  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttc 20060370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 7548091 - 7548194
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||| | ||||||||||||| | | | |||| |||||||||||| |||| || ||||||| ||||||| |||| ||||||| ||  ||||||||||    
T  7548091 aatcacattgcaatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaaca 7548190  T
Q  405 agat 408  Q
    ||||    
T  7548191 agat 7548194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 2634465 - 2634582
Alignment:
Q  305 aatcacatcggaatgagaggg-atcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaac 403  Q
    |||||||||| |||||||||| ||||| | || ||| | |||||||| |||||| || |||||||||||  ||||||| ||||||||||  ||||  |||    
T  2634465 aatcacatcgaaatgagaggggatcctgaggttgtgtatgtatgagattgcatgattaaaggaaggcttgcaagaattgtttggtactagctatacaaac 2634564  T
Q  404 aagatacatcttcatttc 421  Q
    ||||| ||||||| ||||    
T  2634565 aagatgcatcttcttttc 2634582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 12728027 - 12728108
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttgg-tactacttatatcaacaagatacatcttcatttc 421  Q
    ||||||| |||  ||||||||||||||| |||||||||||| ||||| |||| | |||||||||||||| ||||||| ||||    
T  12728027 aggtatgggacaacatggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttc 12728108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 27796048 - 27795950
Alignment:
Q  42 attctacttgatcaacaactaaaaattgctaaactacattttcaaaccctcaaccaattctacttgatcgacaact-aaaaactccaaccttcaacaaaa 140  Q
    ||||||||||||||| ||||| ||||| ||||||||||  |||||||||| ||| | || ||||| ||| |||||| |||||| | ||||||||||||||    
T  27796048 attctacttgatcaataactacaaattcctaaactaca--ttcaaaccctaaacaatttttacttcatcaacaactcaaaaaccctaaccttcaacaaaa 27795951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 843068 - 842992
Alignment:
Q  316 aatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtacta 392  Q
    ||||||||||||| | |  ||||| ||||||| | ||||||| |||||||||| | | |||||||| ||||||||||    
T  843068 aatgagagggatcatgagatcgtgtaggtatgtgtctgcatgattgaaggaagtcgtgtaagaattgtttggtacta 842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 405
Target Start/End: Original strand, 2739558 - 2739622
Alignment:
Q  341 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaa 405  Q
    ||||||||||||| |||||| | | ||| |||||||||||| ||| | ||||| |||||||||||    
T  2739558 aggtatgagactgtatggttaaggaaagacttataagaattgtttagcactacatatatcaacaa 2739622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 415
Target Start/End: Complemental strand, 16410831 - 16410759
Alignment:
Q  343 gtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
    ||||| || ||||| |||||||||| ||||||||||||| |||  ||||||  ||| ||||||||| ||||||    
T  16410831 gtatgggaatgcattgttgaaggaaagcttataagaattatttactactaccaataccaacaagatgcatctt 16410759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 107699 - 107493
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| ||||||  | |||||||||||||||||||||||||||||  |||||||| | ||||||| |||||  ||||||||||    
T  107699 tgtaacgcctccgcttggtgggcatgtaacacccgaggctgatgaggacggggagtggtccggttcctggcatgcttctaggaaaaactgaatcacatcg 107600  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    ||||||||||||| || | | ||| |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||| |||||    
T  107599 gaatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatct 107500  T
Q  415 tcatttc 421  Q
    || ||||    
T  107499 tcttttc 107493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 215 - 421
Target Start/End: Complemental strand, 162915 - 162708
Alignment:
Q  215 ttgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatc 313  Q
    ||||||||||| | ||||||||  ||||||||| ||||||||||||||  ||||||||||| | |||||| || | |||||||||||||  ||| |||||    
T  162915 ttgtaacgcctcctcttggtggacatgtaatgcccgaggctgatgagggtggggagtggtctggctcctgacatgcttctaggcaaaactgaattacatc 162816  T
Q  314 ggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatc 413  Q
    ||||||||||||||||| | | ||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||| ||||    
T  162815 ggaatgagagggatcctgaggccgtacaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatc 162716  T
Q  414 ttcatttc 421  Q
    ||| ||||    
T  162715 ttcttttc 162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 268 - 415
Target Start/End: Complemental strand, 69998 - 69851
Alignment:
Q  268 gagtggtccgactcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaa 367  Q
    |||||||| |||| |||| || ||||||| ||| |  | |||||||  |||||||||||||||||     ||||||||||||||||||| ||||||||||    
T  69998 gagtggtctgacttctggaagcttctaggtaaagccgattcacatcataatgagagggatcctaagactatgcaggtatgagactgcatcgttgaaggaa 69899  T
Q  368 ggcttataagaattttttggtactacttatatcaacaagatacatctt 415  Q
     |||||||| |||| ||||||||||| |||||||||| ||| ||||||    
T  69898 tgcttataataattgtttggtactacctatatcaacatgatgcatctt 69851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 105630 - 105836
Alignment:
Q  216 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 314  Q
    |||||||||| ||||||||||| ||||||  | | |||||||||||| |||||||||||| |  |||||||| | |||||||||||||  ||||||||||    
T  105630 tgtaacgcctccgcttggtgggcatgtaacacccaaggctgatgagggcggggagtggtctggttcctggcatgcttctaggcaaaactaaatcacatcg 105729  T
Q  315 gaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatct 414  Q
    |||||||||||||||| | | ||| ||||||||  |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||    
T  105730 gaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaacaaaatgcatct 105829  T
Q  415 tcatttc 421  Q
    || ||||    
T  105830 tcttttc 105836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 18966 - 19082
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||  | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  18966 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 19065  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  19066 agattcatcttcttttc 19082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 234 - 369
Target Start/End: Complemental strand, 18339 - 18203
Alignment:
Q  234 tgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaa 332  Q
    |||| |||||| ||||||||| ||||||| |||||||||||||| ||||||||| | |||||||||| ||  |||||||||||||||||||||||||  |    
T  18339 tgggcatgtaacgctcgaggcggatgagggcggggagtggtccggctcctggcatgcttctaggcaacactgaatcacatcggaatgagagggatccaga 18240  T
Q  333 agtcgtgcaggtatgagactgcatggttgaaggaagg 369  Q
     | |||||||||||| |||||||||||||||||||||    
T  18239 ggccgtgcaggtatgggactgcatggttgaaggaagg 18203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 2197 - 2081
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| | |||||| |||| |||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  2197 aatcacaccagaatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 2098  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  2097 agatgcatcttcttttc 2081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 416
Target Start/End: Original strand, 245031 - 245197
Alignment:
Q  251 aggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacat-aatcacatcggaatgagagggatcctaaagtcgtgcaggtatga 348  Q
    |||||||||||| |||||||||||||| ||| ||||| |  |||||  |||| || |||||||||||||||||||||||||| | | | || |||||||     
T  245031 aggctgatgagggcggggagtggtccggctcttggcatgcatctaga-aaaatatgaatcacatcggaatgagagggatcctgaggccatgtaggtatgg 245129  T
Q  349 gactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  245130 gactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 249 - 422
Target Start/End: Original strand, 245458 - 245632
Alignment:
Q  249 cgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatg 347  Q
    |||||||||||||| |||||||||||||| ||||||||  | ||||||| |||||  |||||||||  ||||| ||||||| | |   |||| |||||||    
T  245458 cgaggctgatgagggcggggagtggtccggctcctggcttggttctaggaaaaactgaatcacatcataatgaaagggatcttgagtccgtgtaggtatg 245557  T
Q  348 agactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcatttca 422  Q
     |||| |||||||||||| | ||||||||||||| ||||||||||| |||||||||||||| ||||||| |||||    
T  245558 ggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttca 245632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 23673 - 23784
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| || |||||||||| || | | | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23673 aatcacaccgaaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 23772  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  23773 agatgcatcttc 23784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 4561 - 4677
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||||||||| ||||||| |||| | | | |||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||    
T  4561 aatcacatcggaaggagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaaca 4660  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  4661 agatgcatcttcttttc 4677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 5016 - 5137
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggctt-----ataagaattttttggtactacttatat 399  Q
    ||||||| ||||||||||||| |||| | | | |||||||||| ||||||||||||||||||||| ||     | ||||||| ||||||||||| |||||    
T  5016 aatcacaccggaatgagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatat 5115  T
Q  400 caacaagatacatcttcatttc 421  Q
     |||||||| ||||||| ||||    
T  5116 taacaagatgcatcttcttttc 5137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 1220 - 1336
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| |||||||||| || |||| | | | |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  1220 aatcacaccggaatgagacggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaaca 1319  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||||||| ||||    
T  1320 agatgcatcttcttttc 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 2742 - 2858
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||| ||||||||||||||| | | |||| ||||||| |||| |||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  2742 aatcacatcgaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaaca 2841  T
Q  405 agatacatcttcatttc 421  Q
    |||| ||| ||| ||||    
T  2842 agatgcatattcttttc 2858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 18280 - 18170
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||||||||| | | |||| ||||||| |||| ||| ||||||||||| |||||||||||| |||| |||||| ||||||||||    
T  18280 aatcacatcggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaaca 18181  T
Q  405 agatacatctt 415  Q
    |||| ||||||    
T  18180 agatgcatctt 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 17740 - 17645
Alignment:
Q  309 acatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| |||||||||||||||| | | |||| ||||||| |||| |||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  17740 acatcagaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 17645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 4128 - 4017
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||||| | |||||||||||||||  | | |||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||| | ||||||||    
T  4128 aatcacaccagaatgagagggatcccgaggccgtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaaca 4029  T
Q  405 agatacatcttc 416  Q
    |||| |||||||    
T  4028 agatgcatcttc 4017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 313 - 422
Target Start/End: Original strand, 154765 - 154874
Alignment:
Q  313 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacat 412  Q
    ||||||||||||| |||| | | | || ||||||| |||| |||||||||||||||||||||||||||| || |||||||| | |||||||||||| |||    
T  154765 cggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcat 154864  T
Q  413 cttcatttca 422  Q
    |||| |||||    
T  154865 cttcttttca 154874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 305 - 413
Target Start/End: Original strand, 14741 - 14849
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||  |||||||||||||  ||||||| ||||  |||||||  |||||||||| ||||||||||||| ||||||| ||| |||||||| |    
T  14741 aatcacatcggaacaagagggatcctaatatcgtgcatgtataggactgcagtgttgaaggaatgcttataagaattgtttggtaatacctatatcaata 14840  T
Q  405 agatacatc 413  Q
    |||| ||||    
T  14841 agatgcatc 14849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 416
Target Start/End: Original strand, 26074 - 26181
Alignment:
Q  309 acatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 408  Q
    ||||| ||| |||||||||||||| | ||||||||| ||||||| |||||||| |  | ||||||||  |||||||||||||||| |||||||||| |||    
T  26074 acatcagaaagagagggatcctaaggccgtgcaggtgtgagacttcatggttgcataatggcttatacaaattttttggtactacatatatcaacatgat 26173  T
Q  409 acatcttc 416  Q
     |||||||    
T  26174 gcatcttc 26181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 404
Target Start/End: Original strand, 16038 - 16135
Alignment:
Q  309 acatcggaatgagagggatcctaaagtcgtgc--aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    ||||| |||||||||||||||| |  ||||||  |||||||||| ||||| |||||| || | ||| |||||||| |||||| |||  ||||||||||    
T  16038 acatcagaatgagagggatcctgatatcgtgcataggtatgagattgcatagttgaatgatgacttgtaagaattgtttggtgctatctatatcaaca 16135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 2154 - 2216
Alignment:
Q  354 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 416  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| |||||||    
T  2154 catggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttc 2216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 45387 - 45499
Alignment:
Q  305 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 404  Q
    |||||||||||||||||||| ||| | |   ||||||  |||| |||| ||| ||||||||||| ||||| |||||| ||||||||||| ||||||||||    
T  45387 aatcacatcggaatgagagg-atcttgagaccgtgcatatatgtgactacattgttgaaggaagacttatgagaattatttggtactacctatatcaaca 45485  T
Q  405 agatacatcttcat 418  Q
    ||||  ||||||||    
T  45486 agatgtatcttcat 45499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 1030 - 981
Alignment:
Q  337 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttg 386  Q
    |||||| |||||||||||||||||||| |||| ||||||| |||||||||    
T  1030 gtgcagatatgagactgcatggttgaaagaagacttataataattttttg 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University