View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14517_high_9 (Length: 307)
Name: NF14517_high_9
Description: NF14517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14517_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 13346627 - 13346900
Alignment:
| Q |
18 |
aggtaaaaatatcaagggctgtgaaagtaagaatatgatcaagctgtcattcaatttttaaagttgcgaaatgcagcacatgtgacaagtagagaatatt |
117 |
Q |
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| T |
13346627 |
aggtaaaaatatcaagggctgtgaaagtaagaatatgatcaagctgtcattcaatttttaaagttgcgaaatgcagcacatgtgacaagtagagaatatt |
13346726 |
T |
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| Q |
118 |
aacacctaatagaaattggcaaaagggggcttcttaaagtaaaattgttccctatggacatgcataaataaatgtaaaagtaaagaatagggtatagcca |
217 |
Q |
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| T |
13346727 |
aacacctaatagaaattggcaaaagggggcttcttaaagtaaaattgttccctatggacaagcataaataaatgtaaaagtaaagaatagggtatagcca |
13346826 |
T |
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| Q |
218 |
atttgatgattattctattgacaaaataagtttagcatcaaagtgaagtactctctgttattgaagtaagaaaa |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13346827 |
atttgatgattattctattgacaaaataagtttagcatcaaagtgaagtactctctgttattgaagtaagaaaa |
13346900 |
T |
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