View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14517_low_15 (Length: 235)
Name: NF14517_low_15
Description: NF14517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14517_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 48288024 - 48287811
Alignment:
| Q |
9 |
attaaaacaaagtgaagaactataacattttctcaannnnnnnnnnnnnnagattggtgaaaggaaacaaaagccaacaatacatcctcaagaatgagac |
108 |
Q |
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| T |
48288024 |
attaaaacaaagtgaagaactataacattttctcaattttttatttttttagattggtgaaaggaaacaaaagccaacaatatatcctcaagaatgagac |
48287925 |
T |
|
| Q |
109 |
ttccaaagtcactatcattttctagagggattgagtgattgatcctttcaacaatcacattagatctaatactaaataataatttgatactgtacacaac |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48287924 |
ttccaaagtcactatcattttctagagggattgagtgattgatcctttcaacaatcacattagatctaatactaaataataatttgatactgtacacaac |
48287825 |
T |
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| Q |
209 |
ctattgaattatgt |
222 |
Q |
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|||| ||||||||| |
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| T |
48287824 |
ctatcgaattatgt |
48287811 |
T |
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