View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14520_low_1 (Length: 715)

Name: NF14520_low_1
Description: NF14520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14520_low_1
NF14520_low_1
[»] chr7 (74 HSPs)
chr7 (381-715)||(8346326-8346660)
chr7 (20-356)||(8346701-8347033)
chr7 (374-715)||(8329839-8330179)
chr7 (378-668)||(8343644-8343930)
chr7 (142-328)||(8330202-8330391)
chr7 (379-678)||(4247356-4247653)
chr7 (376-671)||(24725311-24725609)
chr7 (379-678)||(44944677-44944978)
chr7 (145-328)||(8343957-8344147)
chr7 (378-676)||(14055250-14055552)
chr7 (378-676)||(14365278-14365580)
chr7 (380-678)||(5058530-5058825)
chr7 (378-678)||(27221417-27221711)
chr7 (379-678)||(5715290-5715582)
chr7 (407-678)||(17811375-17811645)
chr7 (379-568)||(24990012-24990200)
chr7 (378-563)||(26281256-26281439)
chr7 (378-680)||(7730189-7730472)
chr7 (377-528)||(9685224-9685375)
chr7 (449-671)||(20570724-20570944)
chr7 (20-127)||(8330415-8330522)
chr7 (20-122)||(8344183-8344285)
chr7 (379-523)||(22687649-22687793)
chr7 (388-680)||(11324988-11325277)
chr7 (378-517)||(39182259-39182397)
chr7 (379-517)||(11326386-11326524)
chr7 (386-503)||(8571250-8571367)
chr7 (379-681)||(21846276-21846554)
chr7 (379-671)||(6916786-6917068)
chr7 (378-570)||(26617415-26617606)
chr7 (400-537)||(27509914-27510051)
chr7 (580-668)||(8329821-8329909)
chr7 (582-680)||(39182357-39182455)
chr7 (580-668)||(8346308-8346396)
chr7 (516-681)||(26565377-26565540)
chr7 (419-517)||(1977692-1977790)
chr7 (579-678)||(24989606-24989704)
chr7 (645-715)||(7730219-7730289)
chr7 (377-471)||(21157811-21157905)
chr7 (645-715)||(21846307-21846377)
chr7 (646-715)||(8343662-8343731)
chr7 (592-680)||(1977760-1977847)
chr7 (647-715)||(39182357-39182425)
chr7 (375-465)||(8630001-8630091)
chr7 (645-715)||(27509272-27509342)
chr7 (579-681)||(30294444-30294545)
chr7 (379-474)||(30294175-30294267)
chr7 (579-671)||(8572336-8572427)
chr7 (378-473)||(26565663-26565758)
chr7 (645-715)||(4247555-4247625)
chr7 (645-715)||(14055456-14055526)
chr7 (645-715)||(14365484-14365554)
chr7 (645-715)||(24725332-24725402)
chr7 (645-715)||(26565408-26565478)
chr7 (645-715)||(30294445-30294515)
chr7 (383-452)||(4574475-4574544)
chr7 (619-678)||(8304324-8304383)
chr7 (546-662)||(27509260-27509374)
chr7 (645-715)||(17811547-17811617)
chr7 (655-715)||(1977758-1977817)
chr7 (647-687)||(5058627-5058667)
chr7 (612-680)||(22687097-22687165)
chr7 (647-687)||(27221516-27221556)
chr7 (655-703)||(44944717-44944765)
chr7 (676-715)||(22687127-22687166)
chr7 (619-681)||(4574968-4575030)
chr7 (645-715)||(5715484-5715554)
chr7 (645-715)||(6916978-6917047)
chr7 (645-715)||(11325178-11325247)
chr7 (645-715)||(20570745-20570815)
chr7 (647-685)||(22687657-22687695)
chr7 (645-703)||(24989645-24989703)
chr7 (646-687)||(6916877-6916918)
chr7 (641-678)||(9685126-9685163)
[»] chr8 (51 HSPs)
chr8 (375-678)||(11879596-11879897)
chr8 (375-678)||(11897012-11897313)
chr8 (376-671)||(15294667-15294959)
chr8 (376-671)||(15475036-15475328)
chr8 (378-671)||(5922048-5922338)
chr8 (375-680)||(29384142-29384449)
chr8 (378-567)||(31424162-31424350)
chr8 (379-678)||(45403029-45403326)
chr8 (381-678)||(19704289-19704583)
chr8 (379-680)||(17646993-17647296)
chr8 (428-680)||(23142224-23142473)
chr8 (418-680)||(6810861-6811118)
chr8 (374-680)||(22910033-22910336)
chr8 (383-567)||(3094185-3094378)
chr8 (375-678)||(7489115-7489417)
chr8 (378-567)||(27836406-27836594)
chr8 (400-678)||(32424356-32424631)
chr8 (378-482)||(24056594-24056698)
chr8 (383-569)||(6292282-6292467)
chr8 (378-454)||(477101-477177)
chr8 (468-562)||(9212202-9212295)
chr8 (645-715)||(29384172-29384242)
chr8 (546-680)||(15761188-15761322)
chr8 (378-474)||(15761473-15761569)
chr8 (645-715)||(8582242-8582312)
chr8 (646-715)||(17647197-17647266)
chr8 (645-715)||(15761218-15761288)
chr8 (596-681)||(17566313-17566398)
chr8 (645-715)||(6811019-6811088)
chr8 (580-678)||(24414119-24414217)
chr8 (579-652)||(8582241-8582314)
chr8 (380-424)||(9036757-9036801)
chr8 (655-715)||(22910063-22910123)
chr8 (378-426)||(23136348-23136396)
chr8 (660-715)||(15231835-15231890)
chr8 (661-715)||(17566313-17566367)
chr8 (645-703)||(23142373-23142431)
chr8 (645-715)||(31424366-31424436)
chr8 (400-517)||(15231745-15231862)
chr8 (595-680)||(15231835-15231920)
chr8 (581-666)||(24056414-24056499)
chr8 (643-715)||(7489143-7489215)
chr8 (582-622)||(31424261-31424301)
chr8 (643-678)||(2040381-2040416)
chr8 (643-678)||(27836131-27836166)
chr8 (645-703)||(11879799-11879857)
chr8 (645-703)||(11897215-11897273)
chr8 (645-715)||(15294868-15294938)
chr8 (645-715)||(15475237-15475307)
chr8 (580-680)||(31424366-31424463)
chr8 (616-678)||(40541652-40541714)
[»] chr4 (49 HSPs)
chr4 (378-680)||(5361795-5362093)
chr4 (401-678)||(9911243-9911518)
chr4 (381-678)||(5375666-5375962)
chr4 (377-680)||(10142897-10143199)
chr4 (379-678)||(9770112-9770409)
chr4 (378-568)||(13023566-13023758)
chr4 (378-678)||(36120823-36121120)
chr4 (380-680)||(17466080-17466378)
chr4 (378-567)||(8889227-8889415)
chr4 (377-678)||(23064793-23065094)
chr4 (377-528)||(13551602-13551753)
chr4 (378-680)||(37240261-37240538)
chr4 (379-512)||(8011212-8011345)
chr4 (380-473)||(7044728-7044821)
chr4 (375-472)||(24719513-24719610)
chr4 (516-678)||(8010968-8011129)
chr4 (583-681)||(6346784-6346882)
chr4 (530-681)||(24719725-24719875)
chr4 (378-483)||(18459733-18459838)
chr4 (379-473)||(4156763-4156857)
chr4 (383-483)||(7815561-7815661)
chr4 (377-484)||(6347088-6347195)
chr4 (645-715)||(8010996-8011066)
chr4 (579-671)||(7044961-7045053)
chr4 (648-715)||(5361825-5361892)
chr4 (648-715)||(6346815-6346882)
chr4 (377-459)||(7452418-7452499)
chr4 (523-667)||(9149565-9149709)
chr4 (655-715)||(24719784-24719844)
chr4 (645-712)||(17466278-17466345)
chr4 (645-715)||(7044962-7045032)
chr4 (595-681)||(10394824-10394910)
chr4 (616-678)||(55476223-55476285)
chr4 (379-452)||(9149791-9149864)
chr4 (611-680)||(18459461-18459530)
chr4 (516-681)||(7045078-7045244)
chr4 (582-681)||(7452707-7452805)
chr4 (645-703)||(9911283-9911341)
chr4 (645-715)||(36121022-36121092)
chr4 (658-715)||(37240450-37240508)
chr4 (646-715)||(10143100-10143169)
chr4 (644-684)||(4157050-4157090)
chr4 (647-687)||(9911402-9911442)
chr4 (645-715)||(9149582-9149653)
chr4 (603-681)||(5943088-5943166)
chr4 (645-703)||(23064833-23064891)
chr4 (477-514)||(4157053-4157090)
chr4 (641-678)||(13551504-13551541)
chr4 (655-688)||(36120930-36120963)
[»] chr1 (53 HSPs)
chr1 (379-678)||(23528656-23528953)
chr1 (375-678)||(16125287-16125591)
chr1 (378-678)||(13100190-13100487)
chr1 (378-682)||(25146596-25146898)
chr1 (377-678)||(9954865-9955166)
chr1 (378-678)||(9351895-9352193)
chr1 (378-681)||(18304640-18304941)
chr1 (375-671)||(21846113-21846401)
chr1 (376-608)||(9327116-9327347)
chr1 (381-678)||(19009780-19010073)
chr1 (379-633)||(13276143-13276395)
chr1 (380-678)||(42179903-42180193)
chr1 (381-676)||(12513283-12513566)
chr1 (478-680)||(47785958-47786157)
chr1 (379-571)||(9128778-9128969)
chr1 (380-677)||(17869583-17869873)
chr1 (377-517)||(41032661-41032801)
chr1 (468-680)||(32881416-32881619)
chr1 (376-512)||(17055995-17056131)
chr1 (579-681)||(16434709-16434809)
chr1 (379-454)||(30619075-30619150)
chr1 (377-483)||(18337547-18337652)
chr1 (379-474)||(14074404-14074499)
chr1 (456-560)||(18228278-18228380)
chr1 (379-466)||(12800623-12800710)
chr1 (579-678)||(17055751-17055850)
chr1 (645-715)||(27917232-27917302)
chr1 (582-680)||(41032603-41032701)
chr1 (645-715)||(47786057-47786127)
chr1 (655-715)||(18228473-18228533)
chr1 (647-715)||(41032633-41032701)
chr1 (378-445)||(34478833-34478900)
chr1 (645-715)||(13100389-13100459)
chr1 (645-715)||(17055779-17055849)
chr1 (645-715)||(23528855-23528925)
chr1 (657-715)||(32881531-32881589)
chr1 (596-667)||(14074326-14074397)
chr1 (648-715)||(30619145-30619211)
chr1 (377-424)||(47785790-47785837)
chr1 (645-715)||(21846134-21846204)
chr1 (390-471)||(8772715-8772796)
chr1 (646-703)||(18304683-18304740)
chr1 (378-471)||(24117006-24117099)
chr1 (595-680)||(30619156-30619240)
chr1 (647-687)||(9327206-9327246)
chr1 (647-687)||(9955026-9955066)
chr1 (647-687)||(12513379-12513419)
chr1 (655-715)||(16125315-16125375)
chr1 (647-687)||(19009937-19009977)
chr1 (382-465)||(27917495-27917578)
chr1 (644-682)||(17055995-17056033)
chr1 (645-715)||(17869610-17869680)
chr1 (437-471)||(27502239-27502273)
[»] scaffold0186 (2 HSPs)
scaffold0186 (375-678)||(8439-8738)
scaffold0186 (645-715)||(8640-8710)
[»] chr5 (31 HSPs)
chr5 (379-671)||(43234868-43235158)
chr5 (380-678)||(18843716-18844012)
chr5 (378-680)||(21058986-21059285)
chr5 (378-671)||(19578941-19579233)
chr5 (380-671)||(23172267-23172560)
chr5 (375-671)||(18051372-18051663)
chr5 (387-681)||(27340016-27340307)
chr5 (379-671)||(38158103-38158383)
chr5 (400-671)||(41688505-41688772)
chr5 (378-545)||(22645681-22645849)
chr5 (428-571)||(19979648-19979790)
chr5 (428-671)||(20320992-20321233)
chr5 (379-504)||(20923718-20923843)
chr5 (546-681)||(43005688-43005823)
chr5 (383-452)||(24106645-24106714)
chr5 (381-453)||(19042444-19042516)
chr5 (381-445)||(20320926-20320990)
chr5 (645-715)||(21059017-21059087)
chr5 (619-678)||(41427657-41427716)
chr5 (649-715)||(43005719-43005785)
chr5 (645-715)||(18843914-18843984)
chr5 (645-715)||(23172288-23172358)
chr5 (645-703)||(27340059-27340117)
chr5 (645-715)||(43235067-43235137)
chr5 (612-681)||(24648240-24648309)
chr5 (626-678)||(15051929-15051981)
chr5 (616-667)||(19377838-19377889)
chr5 (478-520)||(19042406-19042448)
chr5 (645-703)||(20321142-20321200)
chr5 (645-715)||(38158124-38158194)
chr5 (479-517)||(43005747-43005785)
[»] chr6 (54 HSPs)
chr6 (379-671)||(15527949-15528239)
chr6 (378-680)||(23897810-23898109)
chr6 (378-680)||(30912236-30912542)
chr6 (379-678)||(26053128-26053425)
chr6 (379-678)||(26073181-26073478)
chr6 (378-678)||(7223518-7223812)
chr6 (376-671)||(17543569-17543872)
chr6 (378-678)||(19748332-19748630)
chr6 (375-678)||(17103198-17103492)
chr6 (379-605)||(17250057-17250280)
chr6 (425-568)||(21354786-21354928)
chr6 (378-644)||(10508883-10509153)
chr6 (378-678)||(11327394-11327701)
chr6 (401-545)||(22498848-22498992)
chr6 (377-504)||(6943464-6943591)
chr6 (378-517)||(27233268-27233407)
chr6 (379-547)||(7918342-7918510)
chr6 (382-538)||(2912218-2912373)
chr6 (378-471)||(18491074-18491167)
chr6 (513-678)||(7918182-7918343)
chr6 (378-458)||(5422798-5422878)
chr6 (645-715)||(2912121-2912191)
chr6 (579-682)||(4841657-4841760)
chr6 (400-474)||(4841953-4842025)
chr6 (579-678)||(22498272-22498371)
chr6 (580-680)||(2912091-2912191)
chr6 (579-678)||(3573732-3573831)
chr6 (381-456)||(3573984-3574059)
chr6 (645-715)||(4841689-4841759)
chr6 (655-714)||(3573761-3573820)
chr6 (378-456)||(10958239-10958317)
chr6 (645-715)||(17103394-17103464)
chr6 (645-715)||(19748532-19748602)
chr6 (645-715)||(22498300-22498370)
chr6 (645-715)||(23898010-23898079)
chr6 (378-483)||(12245108-12245213)
chr6 (406-471)||(18490998-18491063)
chr6 (382-471)||(27890137-27890225)
chr6 (646-706)||(10508886-10508946)
chr6 (644-715)||(30912266-30912337)
chr6 (645-715)||(7918210-7918280)
chr6 (645-715)||(17543590-17543660)
chr6 (645-715)||(26053156-26053226)
chr6 (645-715)||(26073209-26073279)
chr6 (406-471)||(18490922-18490987)
chr6 (582-623)||(27233267-27233308)
chr6 (382-471)||(33583766-33583855)
chr6 (647-687)||(7223610-7223650)
chr6 (404-471)||(8285760-8285827)
chr6 (648-687)||(23897910-23897949)
chr6 (501-557)||(27614594-27614651)
chr6 (402-447)||(7359871-7359916)
chr6 (386-443)||(8545030-8545087)
chr6 (647-688)||(27233267-27233308)
[»] chr2 (46 HSPs)
chr2 (375-678)||(31237808-31238110)
chr2 (380-676)||(35565788-35566082)
chr2 (378-680)||(15588685-15588979)
chr2 (375-671)||(1404779-1405073)
chr2 (377-678)||(36429846-36430145)
chr2 (377-547)||(30432417-30432587)
chr2 (378-678)||(20063713-20064020)
chr2 (381-570)||(31578007-31578194)
chr2 (462-671)||(1690567-1690774)
chr2 (378-508)||(23863321-23863451)
chr2 (381-512)||(25539222-25539353)
chr2 (379-505)||(19491855-19491982)
chr2 (378-474)||(1690796-1690892)
chr2 (516-681)||(16766922-16767085)
chr2 (516-681)||(27406927-27407091)
chr2 (648-715)||(16766987-16767054)
chr2 (378-474)||(5395682-5395778)
chr2 (376-484)||(15266079-15266187)
chr2 (546-681)||(13502502-13502637)
chr2 (379-473)||(16766710-16766804)
chr2 (546-678)||(19262148-19262279)
chr2 (516-678)||(25538977-25539138)
chr2 (407-471)||(34841584-34841648)
chr2 (645-713)||(35565819-35565887)
chr2 (415-474)||(31023259-31023318)
chr2 (645-709)||(13502539-13502603)
chr2 (579-671)||(30433013-30433105)
chr2 (375-474)||(17995051-17995150)
chr2 (375-458)||(19245149-19245232)
chr2 (645-715)||(19262176-19262246)
chr2 (645-715)||(30433014-30433084)
chr2 (619-678)||(974576-974635)
chr2 (619-681)||(19245827-19245889)
chr2 (378-464)||(24473335-24473420)
chr2 (645-715)||(25539005-25539075)
chr2 (645-714)||(5395384-5395452)
chr2 (477-517)||(13502561-13502601)
chr2 (626-678)||(27523928-27523980)
chr2 (378-466)||(27750194-27750282)
chr2 (647-687)||(31237968-31238008)
chr2 (648-715)||(1404985-1405052)
chr2 (655-714)||(1690589-1690648)
chr2 (478-517)||(16766987-16767026)
chr2 (648-715)||(27406993-27407060)
chr2 (647-688)||(1404881-1404922)
chr2 (400-457)||(15516610-15516667)
[»] chr3 (64 HSPs)
chr3 (377-678)||(28745768-28746073)
chr3 (378-545)||(29067283-29067450)
chr3 (378-680)||(8155959-8156261)
chr3 (377-661)||(39427900-39428183)
chr3 (377-676)||(24620031-24620334)
chr3 (379-676)||(22137278-22137572)
chr3 (384-680)||(17064326-17064606)
chr3 (452-676)||(42696920-42697143)
chr3 (379-678)||(20756039-20756319)
chr3 (380-528)||(3449272-3449419)
chr3 (388-571)||(21963438-21963620)
chr3 (388-571)||(21985874-21986056)
chr3 (379-505)||(30727694-30727820)
chr3 (400-566)||(22494731-22494889)
chr3 (378-483)||(27676355-27676460)
chr3 (468-570)||(15515195-15515296)
chr3 (376-525)||(25870350-25870508)
chr3 (378-528)||(22356032-22356183)
chr3 (379-473)||(24649724-24649818)
chr3 (579-681)||(27676634-27676736)
chr3 (378-471)||(15806543-15806635)
chr3 (536-680)||(25870152-25870294)
chr3 (579-681)||(6136398-6136500)
chr3 (645-715)||(6136429-6136499)
chr3 (579-678)||(13286142-13286241)
chr3 (579-680)||(28135960-28136061)
chr3 (376-475)||(17796374-17796473)
chr3 (376-475)||(19104814-19104913)
chr3 (401-483)||(10872971-10873053)
chr3 (645-715)||(13286143-13286213)
chr3 (579-680)||(3449140-3449241)
chr3 (645-715)||(17064506-17064576)
chr3 (645-715)||(25870182-25870252)
chr3 (645-715)||(27676635-27676705)
chr3 (380-458)||(28135723-28135801)
chr3 (645-715)||(42697047-42697117)
chr3 (376-475)||(17796265-17796364)
chr3 (376-475)||(17796483-17796582)
chr3 (376-475)||(19104705-19104804)
chr3 (376-475)||(19104923-19105022)
chr3 (645-715)||(3449170-3449240)
chr3 (579-681)||(10872544-10872646)
chr3 (645-715)||(21963630-21963700)
chr3 (645-715)||(21986066-21986136)
chr3 (645-715)||(22137476-22137546)
chr3 (645-715)||(28745975-28746045)
chr3 (622-678)||(22971050-22971106)
chr3 (656-715)||(8155989-8156048)
chr3 (619-678)||(8592231-8592290)
chr3 (645-715)||(20756221-20756291)
chr3 (657-715)||(28135973-28136031)
chr3 (579-661)||(29067475-29067557)
chr3 (647-687)||(8156121-8156161)
chr3 (379-471)||(13005927-13006019)
chr3 (477-517)||(27676637-27676677)
chr3 (383-427)||(42696870-42696914)
chr3 (643-678)||(3041485-3041520)
chr3 (643-678)||(18014253-18014288)
chr3 (645-715)||(10872575-10872645)
chr3 (658-715)||(17796779-17796834)
chr3 (658-715)||(19105219-19105274)
chr3 (643-681)||(27090704-27090742)
chr3 (645-715)||(29067476-29067546)
chr3 (645-715)||(39428102-39428172)
[»] scaffold0417 (2 HSPs)
scaffold0417 (378-676)||(7289-7585)
scaffold0417 (645-715)||(7315-7385)
[»] scaffold0042 (2 HSPs)
scaffold0042 (378-681)||(93534-93834)
scaffold0042 (645-715)||(93565-93635)
[»] scaffold0510 (3 HSPs)
scaffold0510 (378-517)||(91-231)
scaffold0510 (582-680)||(34-131)
scaffold0510 (647-715)||(64-131)
[»] scaffold0603 (3 HSPs)
scaffold0603 (516-681)||(8788-8952)
scaffold0603 (375-458)||(9070-9153)
scaffold0603 (645-715)||(8819-8889)
[»] scaffold0016 (3 HSPs)
scaffold0016 (579-671)||(56264-56356)
scaffold0016 (645-715)||(56285-56355)
scaffold0016 (500-544)||(58746-58790)
[»] scaffold0048 (5 HSPs)
scaffold0048 (378-471)||(48825-48918)
scaffold0048 (581-681)||(61143-61243)
scaffold0048 (581-667)||(48505-48591)
scaffold0048 (646-715)||(48522-48591)
scaffold0048 (419-473)||(61418-61472)
[»] scaffold0036 (1 HSPs)
scaffold0036 (378-483)||(37191-37296)
[»] scaffold0534 (2 HSPs)
scaffold0534 (596-681)||(885-970)
scaffold0534 (661-715)||(885-939)
[»] scaffold0115 (1 HSPs)
scaffold0115 (379-464)||(35103-35188)
[»] scaffold1892 (1 HSPs)
scaffold1892 (417-482)||(886-951)
[»] scaffold0028 (1 HSPs)
scaffold0028 (616-681)||(145823-145888)
[»] scaffold0150 (1 HSPs)
scaffold0150 (616-681)||(33173-33238)


Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 381 - 715
Target Start/End: Complemental strand, 8346660 - 8346326
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 480  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  481 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 580  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||       ||    
T  8346560 tccatcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatatatttagtattattatttttttgg 8346461  T
Q  581 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||||||||||||    
T  8346460 taaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacgatt 8346361  T
Q  681 tcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||||||||||||||||||||||||||||    
T  8346360 tcttatatcaattctataaaagtagttgagtaaaa 8346326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 8347033 - 8346701
Alignment:
Q  20 gtgctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8347033 gtgctatatgccatggaagggaggtaaaagaaagggagcacattgagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattt 8346934  T
Q  120 tcataatgnnnnnnnnnnnnnnagggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaacttgtt 219  Q
    ||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8346933 tcataatgttttttttttt---agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaaattgtt 8346837  T
Q  220 actttgattttattacaatataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgctttaaacttg 319  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  8346836 actttgattttattacaatataat-ttttcaaacctttagtttgattattattattatcttatagtgttaaagtttatgataatggttgcattaaacttg 8346738  T
Q  320 ttaattaaaccattgttgtcaaaatcctttactttgg 356  Q
    |||||||||||||||||||||||||||||||||||||    
T  8346737 ttaattaaaccattgttgtcaaaatcctttactttgg 8346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 374 - 715
Target Start/End: Complemental strand, 8330179 - 8329839
Alignment:
Q  374 aaatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8330179 aaatcattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaata 8330080  T
Q  474 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagta-ttattan 572  Q
    | |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||      
T  8330079 ggaaaaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatatacttattatttatt-- 8329982  T
Q  573 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 672  Q
          ||||||||||||||||||||||||| |||| | |||||||||||||||||||||| |||| || ||||||||||||| |||||||||||||||     
T  8329981 ttttttggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatt 8329882  T
Q  673 ttacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  8329881 ttacgatttcttatatcaattctacaaaagtagttgagtaaaa 8329839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 378 - 668
Target Start/End: Complemental strand, 8343930 - 8343644
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    |||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  8343930 cattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatgaa 8343831  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||          
T  8343830 aaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattttataagttatatttagtattattattttt- 8343732  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgc 668  Q
       ||||||||||||| |||||||||||||| | ||||| |||||||||||||||| |||| || ||||||||| ||||||||||||||||    
T  8343731 ---taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgc 8343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 142 - 328
Target Start/End: Complemental strand, 8330391 - 8330202
Alignment:
Q  142 agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaacttgttactttgattttattacaatata 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8330391 agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaaagataatttttgcattgaacttgttactttgattttattacaatata 8330292  T
Q  242 atgttttcaaacctttagtttgattattatta---ttatcttacagtgttaaagtttatgataatgtttgctttaaacttgttaattaaa 328  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8330291 atgttttcaaacctttagtttgattattattattattatcttacagtgttaaagtttatgataatgtttgcattaaacttgttaattaaa 8330202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 379 - 678
Target Start/End: Original strand, 4247356 - 4247653
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||  ||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaa 4247455  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||| ||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||||||||            
T  4247456 aattcatcgattttgattgcgattttatgatttcttataaactaagtcatttatgactatatatca-tttgtaacatatatttagtattatt-tttttta 4247553  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| || |  | ||||||||||||| || |||||||||||| ||||||    
T  4247554 ggtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacga 4247653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 376 - 671
Target Start/End: Complemental strand, 24725609 - 24725311
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    ||||||||||||||||||| ||| ||||||||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||     
T  24725609 atcattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaatagg 24725510  T
Q  476 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat----ta 571  Q
     |||||||||  ||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    |     
T  24725509 caaaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattattttatt 24725411  T
Q  572 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
           |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||| |||||||||||||||    
T  24725410 ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgat 24725311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 379 - 678
Target Start/End: Complemental strand, 44944978 - 44944677
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcac----cttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    ||||||||| |||||||||||||||||||| |||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
      ||||||||| |||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       
T  44944878 tcaaaatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-tt 44944781  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 674  Q
        |||||| || || ||||||||||||||||| |  |||||||||||| |||||||| ||||  |  ||||||||  ||||||||| |||||||| ||    
T  44944780 ttttggtaaagtctatcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgatttt 44944681  T
Q  675 acga 678  Q
    ||||    
T  44944680 acga 44944677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 145 - 328
Target Start/End: Complemental strand, 8344147 - 8343957
Alignment:
Q  145 gaagattttcataatgtttgattatctctaactaa------tagtagtcatgttaa-tgataatttttgcattgaacttgttactttgattttattacaa 237  Q
    ||||||||||||||||||||||||||||||| |||      ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  8344147 gaagattttcataatgtttgattatctctaattaactaatatagtagtcatgttaaatgataatttttgcattgaacttgttactttgactttattacaa 8344048  T
Q  238 tataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgctttaaacttgttaattaaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  8344047 tataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgcatttaacttgttaattaaa 8343957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 378 - 676
Target Start/End: Original strand, 14055250 - 14055552
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||| |||||||  || || |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14055250 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14055349  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 572  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14055350 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14055448  T
Q  573 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 672  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || ||||||||||||||||||||| |||||||     
T  14055449 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgatt 14055548  T
Q  673 ttac 676  Q
    ||||    
T  14055549 ttac 14055552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 378 - 676
Target Start/End: Original strand, 14365278 - 14365580
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||| |||||||  || || |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14365278 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14365377  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 572  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14365378 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14365476  T
Q  573 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 672  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || ||||||||||||||||||||| |||||||     
T  14365477 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgatt 14365576  T
Q  673 ttac 676  Q
    ||||    
T  14365577 ttac 14365580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 380 - 678
Target Start/End: Original strand, 5058530 - 5058825
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||||||||  |||||||  |||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 579  Q
    ||||   |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       |    
T  5058630 atcctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-ttttttg 5058727  T
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||| ||||| ||||||||||||||||| |  |||| ||||||| |||| ||| || |  | || ||||||||||||||||||||||| || ||||||    
T  5058728 gtaaagtccatcgattttgattgcgattttacaattttttatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacga 5058825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 378 - 678
Target Start/End: Original strand, 27221417 - 27221711
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||| |||||||  || ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||| |  |    
T  27221417 cattgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggca 27221516  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| || ||           
T  27221517 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagttttttt-----tt 27221610  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||| ||||  | |||||| |||||||||| |  ||||| || ||| |||||||| ||||   |||||||||||||||||||||||||||||| |||||    
T  27221611 tggtacaatcagtcgattttaattgcgattttacaatttcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacg 27221710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 379 - 678
Target Start/End: Original strand, 5715290 - 5715582
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||| | |||||||||| ||| |||| ||||||||||| ||||||||   ||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||| ||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | | || ||            
T  5715389 aattcatcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatttttttt-----ttt 5715482  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||| ||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  | ||||||||||| ||||||||||||||||| ||||||    
T  5715483 ggtaaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacga 5715582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 407 - 678
Target Start/End: Original strand, 17811375 - 17811645
Alignment:
Q  407 taaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttac 506  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||   |||||||| |||||| || |||||| |||||||||||||    
T  17811375 taaaattcttgattttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttac 17811474  T
Q  507 gatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgat 606  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||||| ||||||||| ||||| ||       |||||||||||| |||||||||||||||    
T  17811475 gatttcttataaactaagtcatttataattatatacca-tttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgattgcgat 17811573  T
Q  607 ttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    || |  ||||  |||||| |||||||| ||||  | |||||||||| |||||||||||||||||| ||||||    
T  17811574 tttacaattttctatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacga 17811645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 379 - 568
Target Start/End: Complemental strand, 24990200 - 24990012
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||| | ||| ||||||| |||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||  ||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 568  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||    
T  24990100 aatccatcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatacta-tttataacatatatttagtatta 24990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 378 - 563
Target Start/End: Complemental strand, 26281439 - 26281256
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||   |    
T  26281439 cattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagca 26281340  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttag 563  Q
    |||||||| ||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  26281339 aaatccatcgatttt-gttgcgatttaacgatttcttataaactaagtcatttatgactatatacca-tttataacttatatttag 26281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 378 - 680
Target Start/End: Complemental strand, 7730472 - 7730189
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||| ||    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||| |||                  |||||||||||||||||||||| ||           
T  7730373 aaatccatcgattttgattgagattttacgatttcttataaactaaatca------------------tttataacatatatttagtattttttttttgt 7730292  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     ||||||||||||  |||||||||||||||| |  |||||||||||||||| |||| |||| || |||||||| | |||||||||| ||||||| |||||    
T  7730291 tggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccattcgattttggttgcgattttacg 7730192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 377 - 528
Target Start/End: Complemental strand, 9685375 - 9685224
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||  ||| || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||     
T  9685375 tcattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagac 9685276  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 528  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9685275 aaaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 9685224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 449 - 671
Target Start/End: Complemental strand, 20570944 - 20570724
Alignment:
Q  449 aaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccatttt 548  Q
    ||||| |||||||||||  |||||||| ||||||||| |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||    
T  20570944 aaatctatagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatatacca-ttt 20570846  T
Q  549 ataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaa 648  Q
    ||||||||||||||||||||||        |||||| ||||| ||||||||||| ||||| || |||||||||||| |||||||| ||||  | ||||||    
T  20570845 ataacatatatttagtattatt-cttttttggtaaagtccatcgattttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaa 20570747  T
Q  649 aatccttcgattttgattgcgat 671  Q
    |||| ||| ||||||||||||||    
T  20570746 aatctttcaattttgattgcgat 20570724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 8330522 - 8330415
Alignment:
Q  20 gtgctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattt 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8330522 gtgctatatgccatggaagggaggtaaaagaaagggagcacagggagagtggtggaagagatcatctataatgacctagaaaacaaaacaactcagattt 8330423  T
Q  120 tcataatg 127  Q
    ||||||||    
T  8330422 tcataatg 8330415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 8344285 - 8344183
Alignment:
Q  20 gtgctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattt 119  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8344285 gtgctatatgccatggaagggaggtaaaagaaagggagcacatggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattt 8344186  T
Q  120 tca 122  Q
    |||    
T  8344185 tca 8344183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 379 - 523
Target Start/End: Complemental strand, 22687793 - 22687649
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| | |||||||||||||||  ||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaa 523  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||    
T  22687693 aatccatcgattttgattgcgattttacgatttcttacaaactaa 22687649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 388 - 680
Target Start/End: Original strand, 11324988 - 11325277
Alignment:
Q  388 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 487  Q
    ||||||| ||| |||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||| | |||||||  ||||| || |     
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattca-ta 11325086  T
Q  488 attttaattgcgattttacgatttcttataaactaagtcatctatgactatatacca---ttttataacatatatttagtattattannnnnnnggtaaa 584  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    ||||||||  ||||||||| || ||        ||||||    
T  11325087 attttgattgcgaatttacgatttcttataaactaagtcatttatgactatataccaattatttataac--atatttagttttttt--ttttttggtaaa 11325182  T
Q  585 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    |||||| |||||||||||  |||| |  ||||| |||||||||| ||||||||| || |||||||| ||||  | |||| ||||||| ||||||||    
T  11325183 atccatcgattttgattgtaattttacaatttc-tatatcaattttacagaagtagttgagtaaaacccttgaaatttggttgcgattttacgatt 11325277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 378 - 517
Target Start/End: Original strand, 39182259 - 39182397
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    |||||||| |||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  478 aaatccattgattttaattgcgattttacgatttcttata 517  Q
    |||||||| ||||||  |||||||||||| ||||||||||    
T  39182358 aaatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 379 - 517
Target Start/End: Original strand, 11326386 - 11326524
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    ||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||  ||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  479 aatccattgattttaattgcgattttacgatttcttata 517  Q
    |||| || |||||| ||||||||||||| ||||| ||||    
T  11326486 aatctatcgattttgattgcgattttacaatttcctata 11326524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 386 - 503
Target Start/End: Original strand, 8571250 - 8571367
Alignment:
Q  386 tcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccat 485  Q
    ||||||||| ||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  486 tgattttaattgcgattt 503  Q
     |||||| ||||||||||    
T  8571350 cgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 379 - 681
Target Start/End: Complemental strand, 21846554 - 21846276
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| | |||| ||  ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    |||| || |||||| |||||||                    |||||||| |||||||||||| || ||||||||||||||||| |||||||            
T  21846455 aatcaatcgattttgattgcga--------------------taagtcatttatgactatatatca-tttataacatatatttaatattatt--tatttg 21846379  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||  |||||||||| ||||| | ||||||||||||| |||||| | |||| || || |||||||||||||||||| ||||||| ||| ||    
T  21846378 ggtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgattttggttgcgattttagga 21846279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 379 - 671
Target Start/End: Original strand, 6916786 - 6917068
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    |||||||||||||||| ||  |||||| | ||||| |||||||||||| ||| || |||||     ||||||||| ||||||||||| | ||||  |  |    
T  6916786 attgttgtcaaaatcccgatttaaatcttgaaatttaggattttgcgattttttttcacct-----gactcaaattcatagtagaattctaaaa--gtta 6916878  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| | |||| |||||||||||||||||||||||||| |||||||| ||||||| ||| |||  |||||||||||||||| || ||||           
T  6916879 aaatccatcggttttgattgcgattttacgatttcttataaattaagtcatttatgact-tattcca-gttataacatatatttaata-tatttttttgt 6916975  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
     |||||||| ||| |||||||||||| |||| || |||||||||||| ||| ||   |||| || |||||||||||||| ||||||||||||||    
T  6916976 tggtaaaattcatcgattttgattgcaattttataatttcttatatcgatt-tatgaaagtagttgagtaaaatccttcaattttgattgcgat 6917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 378 - 570
Target Start/End: Complemental strand, 26617606 - 26617415
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc--atagtagaatcccaaa--ata 473  Q
    ||||||| | ||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||||||  |||| |  |||||||||| | |||  |||    
T  26617606 cattgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatata 26617507  T
Q  474 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 570  Q
    |  |||||| || |||||| |||||||||||||||  |||| || |||||||||| |||||||||    || |||||||||||||||||||||||||    
T  26617506 ggcaaaatctatcgattttgattgcgattttacgagatcttgtagactaagtcatttatgactat----ca-tttataacatatatttagtattatt 26617415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 27510051 - 27509914
Alignment:
Q  400 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 499  Q
    ||||| |||||||  |||||||||||| ||||||||| | |||||| ||||||| ||||||||||   |||||||  ||||| |||  ||||| ||||||    
T  27510051 taaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgcg 27509952  T
Q  500 attttacgatttcttataaactaagtcatctatgacta 537  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27509951 attttacgatttcttataaactaagtcatttatgacta 27509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 580 - 668
Target Start/End: Complemental strand, 8329909 - 8329821
Alignment:
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgc 668  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||| || |||||||||||||| |||||||||||    
T  8329909 gtaaaatcctttgattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgattgc 8329821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 582 - 680
Target Start/End: Original strand, 39182357 - 39182455
Alignment:
Q  582 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||| ||||||| ||||||||| |  |||||||||||| |||||||| |||| || ||||||||||||||||||||| ||||||| ||||||||    
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgatt 39182455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 580 - 668
Target Start/End: Complemental strand, 8346396 - 8346308
Alignment:
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgc 668  Q
    ||||||||| ||||||||||||||||| | | |||||||||||||||||||| | |||| || ||||||||||||||||||||| ||||    
T  8346396 gtaaaatcctttgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttgtttgc 8346308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 516 - 681
Target Start/End: Complemental strand, 26565540 - 26565377
Alignment:
Q  516 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 615  Q
    |||||| |||||| ||||||||||||| | ||||||||||||||| |  ||||||        ||||||||||||  ||||||||||| |||| | ||||    
T  26565540 taaactgagtcatttatgactatatac-agtttataacatatattaac-attatttttgttttggtaaaatccatcaattttgattgcaattttacgatt 26565443  T
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    | ||||||  |||||||| |||| || |||||||||||||||||||||||| |||| |||||||||    
T  26565442 ttttatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattt 26565377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 419 - 517
Target Start/End: Original strand, 1977692 - 1977790
Alignment:
Q  419 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 517  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||   ||||| | | |||||| |||||||||||| |||||||||||    
T  1977692 ttttgcgattttttccaccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 579 - 678
Target Start/End: Complemental strand, 24989704 - 24989606
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  |  ||||||||||||||||||||||||| || ||||||    
T  24989704 ggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcct-tagtaaaatccttcgattttgattgccattttacga 24989606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 7730289 - 7730219
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||||||| |||| |||||||||||||||| || ||||||||||||||||||    
T  7730289 gtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaa 7730219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 471
Target Start/End: Complemental strand, 21157905 - 21157811
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||||  |||| | ||||||||||||||||||| | ||||| ||||    
T  21157905 tcattgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaa 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 21846377 - 21846307
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  21846377 gtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaa 21846307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 646 - 715
Target Start/End: Complemental strand, 8343731 - 8343662
Alignment:
Q  646 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||| | || |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  8343731 taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaa 8343662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 592 - 680
Target Start/End: Original strand, 1977760 - 1977847
Alignment:
Q  592 gattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||||||||||| | ||||||||||||| |||||| | || |  | ||||||||||||||||||||||||||||| ||||||||    
T  1977760 gattttgattgcgattttaggatttcttatatcgattctaaaaaa-taattgagtaaaatccttcgattttgattgcgattttacgatt 1977847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 647 - 715
Target Start/End: Original strand, 39182357 - 39182425
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| ||||||||| ||||||| |||| |||||||||||| |||||| ||||||||||||||||||    
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaa 39182425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 465
Target Start/End: Complemental strand, 8630091 - 8630001
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 465  Q
    |||||||||||||||||||  ||| ||| ||| |||||  |||||||||| |||||  | | |||||||||||||||||||||||||||||    
T  8630091 aatcattgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaatc 8630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 27509342 - 27509272
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||  |||| ||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  27509342 gtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttgagtaaaa 27509272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 579 - 681
Target Start/End: Original strand, 30294444 - 30294545
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| || |||||||| ||||| | |||||||| |||| |||||| | |||| ||  |||||||||||||||||||||||| ||| ||||||    
T  30294444 ggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaatccttcgattttgattgtgat-ttacga 30294542  T
Q  679 ttt 681  Q
    |||    
T  30294543 ttt 30294545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 379 - 474
Target Start/End: Original strand, 30294175 - 30294267
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    ||||||||||||||||  || ||||||||||||| |||||||||| || ||| ||||||||   |||||||||||||||| | |||| ||||||||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcacctt---cgactcaaatccatagcaaaatctcaaaatag 30294267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 579 - 671
Target Start/End: Original strand, 8572336 - 8572427
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    ||||||||||||||||||||||||| |||| || ||||| ||||||||||||||| | ||  | || ||| ||| ||||||||||||||||||    
T  8572336 ggtaaaatccattgattttgattgcaattttataatttc-tatatcaattctacaaatgtccttgattaacatctttcgattttgattgcgat 8572427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 473
Target Start/End: Complemental strand, 26565758 - 26565663
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    ||||||||||||||| ||| | |||||| |||||||||| ||||||  ||||| ||||| || ||||| |||||| ||||| |||||| |||||||    
T  26565758 cattgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacgattcaaattcatagcagaatctcaaaata 26565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 4247555 - 4247625
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| |||| |  ||||||||||    
T  4247555 gtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaa 4247625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 14055456 - 14055526
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| | ||||||||||||||| || | ||||||||||||  ||||| ||||||||||||||||||    
T  14055456 gtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaa 14055526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 14365484 - 14365554
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| | ||||||||||||||| || | ||||||||||||  ||||| ||||||||||||||||||    
T  14365484 gtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaa 14365554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 24725402 - 24725332
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  24725402 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 24725332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 26565478 - 26565408
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || ||||||||||| || ||||||||| ||||||  |||||| ||||||||||||||||||    
T  26565478 gtaaaatccatcaattttgattgcaattttacgattttttatattgattctacaaaagtagttgagtaaaa 26565408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 30294445 - 30294515
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||| |||||||| ||| ||| |||||||| |||| ||||||||||||||||| |||||||    
T  30294445 gtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaa 30294515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 4574475 - 4574544
Alignment:
Q  383 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 452  Q
    |||| |||||| |||| ||||||||||||| ||| |||||||||||||  ||||||||||||| ||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacgattcaaat 4574544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 8304324 - 8304383
Alignment:
Q  619 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||||| ||||  | ||||||||||||||||||||||||| ||| ||||||    
T  8304324 tatatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacga 8304383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 662
Target Start/End: Complemental strand, 27509374 - 27509260
Alignment:
Q  546 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 645  Q
    |||||||||||||||||||||||||        ||||||||| || || ||| |||||||||| |  |||||||||||| |||||| | |||| || |||    
T  27509374 tttataacatatatttagtattatt--ttttttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttgag 27509277  T
Q  646 taaaatccttcgatttt 662  Q
    ||||||||||| |||||    
T  27509276 taaaatccttcaatttt 27509260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 17811547 - 17811617
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||  |||||| |||||| ||||||  ||||||||||    
T  17811547 gtaaaatccatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaa 17811617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 715
Target Start/End: Original strand, 1977758 - 1977817
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||||||||||| ||| ||||||||||||| |||||| |||| || ||||||||||    
T  1977758 tcgattttgattgcgattttaggatttcttatatcgattcta-aaaaataattgagtaaaa 1977817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Original strand, 5058627 - 5058667
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  5058627 aaaatcctacgattttgattgcgattttacgatttcttata 5058667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 612 - 680
Target Start/End: Complemental strand, 22687165 - 22687097
Alignment:
Q  612 gatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||||||| |||||||| |||| || ||||||||| |||| |||||| ||| ||| ||||||||    
T  22687165 gatttcttatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgatt 22687097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Original strand, 27221516 - 27221556
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  27221516 aaaatccatcgattttgattgcgattttacgatttcttata 27221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 703
Target Start/End: Complemental strand, 44944765 - 44944717
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  44944765 tcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 44944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 715
Target Start/End: Complemental strand, 22687166 - 22687127
Alignment:
Q  676 cgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  22687166 cgatttcttatatcgattctacaaaagtagttgagtaaaa 22687127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 681
Target Start/End: Original strand, 4574968 - 4575030
Alignment:
Q  619 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    |||||| |||||||| |||| || ||||| ||| ||| ||||||||||||||| |||||||||    
T  4574968 tatatcgattctacaaaagtagttgagtagaattctttgattttgattgcgattttacgattt 4575030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 5715484 - 5715554
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | ||||||||||||||||| |||  ||||| |||||| |||||| ||||||  ||||||||||    
T  5715484 gtaaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaa 5715554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 6916978 - 6917047
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | |||||||||||||| || |||  |||||||||||| ||| ||| |||||||||||||||||    
T  6916978 gtaaaattcatcgattttgattgcaattttataatttcttatatcgatt-tatgaaagtagttgagtaaaa 6917047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 11325178 - 11325247
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||||||||||||  || |||| |||||| ||||||||| || | ||||||||||||||||    
T  11325178 gtaaaatccatcgattttgattgtaattttacaatttct-atatcaattttacagaagtagttgagtaaaa 11325247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 20570815 - 20570745
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||| ||| ||||||||||||| ||| |||  |||||||||||| |||||| ||||||  ||||||||||    
T  20570815 gtaaagtccatcgattttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaaaa 20570745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 647 - 685
Target Start/End: Complemental strand, 22687695 - 22687657
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttctta 685  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  22687695 aaaatccatcgattttgattgcgattttacgatttctta 22687657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 703
Target Start/End: Complemental strand, 24989703 - 24989645
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||||||| ||||||||||||||||| |||  ||||| |||||| |||||| ||||||    
T  24989703 gtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagt 24989645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 687
Target Start/End: Original strand, 6916877 - 6916918
Alignment:
Q  646 taaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    |||||||| ||| ||||||||||||| |||||||||||||||    
T  6916877 taaaatccatcggttttgattgcgattttacgatttcttata 6916918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 678
Target Start/End: Complemental strand, 9685163 - 9685126
Alignment:
Q  641 tcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  9685163 tcgagtaaaatccttcgattttaattgcgattttacga 9685126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 1e-83; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 375 - 678
Target Start/End: Original strand, 11879596 - 11879897
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  11879596 aatcattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11879695  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
     |||||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||       
T  11879696 gaaaaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-tt 11879793  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 674  Q
        |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||||||| ||    
T  11879794 ttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgatttt 11879893  T
Q  675 acga 678  Q
    ||||    
T  11879894 acga 11879897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 375 - 678
Target Start/End: Original strand, 11897012 - 11897313
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  11897012 aatcattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11897111  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
     |||||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||       
T  11897112 gaaaaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-tt 11897209  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 674  Q
        |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||||||| ||    
T  11897210 ttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgatttt 11897309  T
Q  675 acga 678  Q
    ||||    
T  11897310 acga 11897313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 376 - 671
Target Start/End: Original strand, 15294667 - 15294959
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||     
T  15294667 atcaatgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatagg 15294766  T
Q  476 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 575  Q
     ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||         
T  15294767 caaaatccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--ttt 15294863  T
Q  576 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
       |||||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | |||||||||||||||||||||||||||||    
T  15294864 ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 15294959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 376 - 671
Target Start/End: Original strand, 15475036 - 15475328
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||     
T  15475036 atcaatgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatagg 15475135  T
Q  476 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 575  Q
     ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||         
T  15475136 caaaatccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--ttt 15475232  T
Q  576 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
       |||||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | |||||||||||||||||||||||||||||    
T  15475233 ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 15475328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 378 - 671
Target Start/End: Original strand, 5922048 - 5922338
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| |    
T  5922048 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagaca 5922147  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| |||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||| || ||||||||||||||||||||  |          
T  5922148 aaatccatcgattttgattgcgattttgcgatttcttataaattaggtcatttatgactatatacca-ttcataacatatatttagtatta-aatttttt 5922245  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
     |||||||||||| || || ||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  5922246 gggtaaaatccatcga-ttagattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 5922338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 375 - 680
Target Start/End: Complemental strand, 29384449 - 29384142
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||| ||||||||||||||| |   |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  29384449 aatcgttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaatag 29384350  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta----tt 570  Q
      ||||| ||| || ||| ||||||||||||||||||||||||||  || |||| ||||||||||||||| |||||||||||||||||||||||    ||    
T  29384349 gcaaaattcatcga-tttgattgcgattttacgatttcttataaaacaattcatttatgactatatacca-tttataacatatatttagtattagtattt 29384252  T
Q  571 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcga 670  Q
            |||||||||||| ||||||||||||||||| | |||||||||||| ||||||||| |||| || ||||||||||||||||||||| ||||||    
T  29384251 ttttttttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttggttgcga 29384152  T
Q  671 tattacgatt 680  Q
    | ||||||||    
T  29384151 ttttacgatt 29384142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 378 - 567
Target Start/End: Original strand, 31424162 - 31424350
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||  |    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 567  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||    
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatatacca-attataacatatatttagtatt 31424350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 379 - 678
Target Start/End: Original strand, 45403029 - 45403326
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||  ||| ||||| ||||||| || ||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||   ||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||||||| |||||| ||||||||||||||||| ||||| ||| ||||||| |||||  |||||||| ||||||||||||||||| ||||||||           
T  45403129 aatccatcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatatacca-tttataacatatatttaatattattattttttt 45403227  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||| || ||||||||||||| ||| |  ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||||||||| ||||||    
T  45403228 ggtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacga 45403326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 381 - 678
Target Start/End: Complemental strand, 19704583 - 19704289
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattca-ggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    ||||||||||||||  || |||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 579  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||| || ||||||||||||||| ||| ||||||||||||||| || ||        |    
T  19704483 atccatcgattttgattgcaattttacgatttcttataaaccaagttatttatgactatatacca-tttgtaacatatatttagttttttt---ttttag 19704388  T
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||| ||||||||||| ||||| | ||||||  ||||| ||||||||  |||  | ||||||| ||||| ||||||||||||||| ||||||    
T  19704387 gtaaaatccatcgattttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctttgattttgattgcgattttacga 19704289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 379 - 680
Target Start/End: Original strand, 17646993 - 17647296
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattatta-nnnn 575  Q
    ||| ||| |||||| ||||  |||| ||||||||||||||||  |||||  | | | | ||||||||| ||| ||| ||||||||| | ||||||         
T  17647093 aattcatcgattttgattgttatttaacgatttcttataaacctagtcattttttttattatatacca-tttgtaaaatatatttaatgttattattttt 17647191  T
Q  576 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatta 675  Q
       | |||||||||| ||||||||||||||||| |  |||||||||||| |||||||| || | || ||||||||||||||||||||||||||||| |||    
T  17647192 tttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgatttta 17647291  T
Q  676 cgatt 680  Q
     ||||    
T  17647292 tgatt 17647296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 428 - 680
Target Start/End: Original strand, 23142224 - 23142473
Alignment:
Q  428 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 527  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| |||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtca 23142323  T
Q  528 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 627  Q
    | ||||||||||||||| ||||||||||||||||||||||||||       |||||| ||||| ||||||||||||||||| |  |||||||||||| ||    
T  23142324 tttatgactatatacca-tttataacatatatttagtattatta--tttttggtaaagtccatcgattttgattgcgattttacaatttcttatatcgat 23142420  T
Q  628 tctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    |||||| ||||  | || ||||||| ||||||||  |||||||| ||||||||    
T  23142421 tctacaaaagtttttgactaaaatcattcgatttaaattgcgattttacgatt 23142473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 418 - 680
Target Start/End: Original strand, 6810861 - 6811118
Alignment:
Q  418 attttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||  ||||| ||| |||||| ||| ||||||||||||||| ||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaat-catcgattttgattacgattttacgatttcatata 6810959  T
Q  518 aactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttc 617  Q
    ||||||||||| ||| |||||||| || |||||||||||||||||||||||||        |||||||||||| |||||||||||||||||    |||||    
T  6810960 aactaagtcatttataactatatatca-tttataacatatatttagtattatt--ttttttggtaaaatccatcgattttgattgcgattt-tcaatttc 6811055  T
Q  618 ttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||| |||||||| |||| || || |||||| ||||||||||| ||||||| ||||||||    
T  6811056 ttatatctattctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgatt 6811118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 374 - 680
Target Start/End: Complemental strand, 22910336 - 22910033
Alignment:
Q  374 aaatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    ||||||||| ||| || |||| ||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||  ||||||    
T  22910336 aaatcattgatgtaaacatcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaata 22910237  T
Q  474 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattann 573  Q
    |  |||||||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||||| |||||| || |       
T  22910236 ggcaaaatccattgattttgattgcgattttaagatttcttataaattaagtaatttatgactatatacca-tttataacatatacttagtactact--t 22910140  T
Q  574 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatat 673  Q
         | ||||   ||| || |||||||||||||| | ||||||||||||| |||||||| || | || || ||||||||||| |||| | ||||||| |    
T  22910139 tttttgttaaacatcatcgactttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttcaatttcggttgcgattt 22910040  T
Q  674 tacgatt 680  Q
    |||||||    
T  22910039 tacgatt 22910033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 383 - 567
Target Start/End: Complemental strand, 3094378 - 3094185
Alignment:
Q  383 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 482  Q
    ||||||||||   ||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  483 cattgattttaattgcgattttacgatttct----------tataaactaagtcatctatgactatataccattttataacatatatttagtatt 567  Q
    ||| |||||| |||||||||||||||||| |          ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 3094185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 375 - 678
Target Start/End: Complemental strand, 7489417 - 7489115
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc----caaa 470  Q
    ||||||| ||||||||||||  |  |||||| |||||| ||| |||||||   |||||||||||||||||||| |||||| ||||||||| |     |||    
T  7489417 aatcattattgtcaaaatccccaattaaatcgtaaaatacagaattttgc---tttcttcaccttcaacgactaaaatccgtagtagaattctaaataaa 7489321  T
Q  471 atagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 570  Q
    ||||| |||||  || |||||| ||||| |||||| ||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| |    
T  7489320 atagacaaaatttatcgattttgattgcaattttatgatttcttataaattaagtcatttatgactatatatca-tttataacatatatttagtattaat 7489222  T
Q  571 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcga 670  Q
    |        ||||||| ||| ||||||||||||||||| |  ||||  |||||| |||||||| ||||  | |||||||||||| |||||||||||||||    
T  7489221 atttttga-gtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatcctccgattttgattgcga 7489123  T
Q  671 tattacga 678  Q
    | ||||||    
T  7489122 ttttacga 7489115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 378 - 567
Target Start/End: Complemental strand, 27836594 - 27836406
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||| |  || || |||||||||||||||||||||||  ||| |||||||||||| ||| |||||||||||||||| | ||||||   |    
T  27836594 cattgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataagca 27836495  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 567  Q
    |||| |||  ||||| ||| | ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  27836494 aaattcatcaattttgattacaattttacaatttcttataaactaagtcatttatgactatatacca-tttataacatgtatttagtatt 27836406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 400 - 678
Target Start/End: Original strand, 32424356 - 32424631
Alignment:
Q  400 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 499  Q
    ||||| |||||||| ||||||||  |||||| ||||   | ||||| |||||| ||||||||||||| |||||||| |||||  || |||||| ||||||    
T  32424356 taaattctaaaatttaggattttatgacttttttca---ttaacgattcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattgcg 32424452  T
Q  500 attttacgatttcttataaactaagtcatctatgactatataccattttataac--atatatttagtattattannnnnnnggtaaaatccattgatttt 597  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||  ||||||||||||||| |        | ||||||| || ||||||    
T  32424453 attttacgatttattatatactaagtcatttatgactatatacca-tttataacatatatatttagtattaat-ttttctggataaaatctatcgatttt 32424550  T
Q  598 gattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
     |||||||||| |  ||||| ||| || |||||||| || |  | |||||||||||||||||||| |||||||| ||||||    
T  32424551 tattgcgattttacaatttcctatctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacga 32424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 24056698 - 24056594
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||| |||||||| |||| ||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||   |||||||||||||| |    
T  24056698 cattgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatagcgaaatcccaaaatagaca 24056599  T
Q  478 aaatc 482  Q
    |||||    
T  24056598 aaatc 24056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 383 - 569
Target Start/End: Complemental strand, 6292467 - 6292282
Alignment:
Q  383 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 482  Q
    |||| ||||| | ||| |||||| ||||||| | ||||||| |||||| |||| ||| ||||||||||| |||||||| ||| | ||||||  ||||||     
T  6292467 ttgttaaaataccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaatt 6292368  T
Q  483 cattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat 569  Q
    ||  |||||| |||||| | |||| |||| |||||| ||||||||| ||| ||||||||||| ||||||| ||||||||| ||||||    
T  6292367 caacgattttgattgcggtcttacaatttattataatctaagtcatttatcactatatacca-tttataaaatatatttaatattat 6292282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc 454  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| |||| ||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 468 - 562
Target Start/End: Complemental strand, 9212295 - 9212202
Alignment:
Q  468 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta 562  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||| |||| |||||| |||||||| |||||||| ||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatatacca-tttataacctatattta 9212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 29384242 - 29384172
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  29384242 gtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaa 29384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 546 - 680
Target Start/End: Complemental strand, 15761322 - 15761188
Alignment:
Q  546 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 645  Q
    |||||||||||||||||| ||||||        |||||||||||| ||||||||||||||||| |  | |||||||||| |||||||| ||||  | |||    
T  15761322 tttataacatatatttagcattatttttgttttggtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagtaattgag 15761223  T
Q  646 taaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||||||||||  |||||||| ||||||||    
T  15761222 taaaatccttcgatttatattgcgattttacgatt 15761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 378 - 474
Target Start/End: Complemental strand, 15761569 - 15761473
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    ||||||||||||||||  ||| ||||||||||| | |||||||||| || ||| || |||||||||||||||||| ||||| | |||||||||||||    
T  15761569 cattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaatag 15761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 8582242 - 8582312
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | |||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||    
T  8582242 gtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaa 8582312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 646 - 715
Target Start/End: Original strand, 17647197 - 17647266
Alignment:
Q  646 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||| ||||||||||||||||| |||| |||||||||||| |||||| |||| |||||||||||||    
T  17647197 taaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaa 17647266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 15761288 - 15761218
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| | |||||||||| |||||| ||||||| ||||||||||    
T  15761288 gtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagtaattgagtaaaa 15761218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 681
Target Start/End: Original strand, 17566313 - 17566398
Alignment:
Q  596 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| |||||||||||||||| || |||||||||    
T  17566313 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattt 17566398  T

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Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 6811019 - 6811088
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| || | |||||||||||| |||||| |||||||||||| |||||    
T  6811019 gtaaaatccatcgattttgattgcgatttt-caatttcttatatctattctacaaaagtagttgattaaaa 6811088  T

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Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 678
Target Start/End: Complemental strand, 24414217 - 24414119
Alignment:
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||| |||||| |||||||  ||||| |  ||||| |||||| |||||||| || |  | ||||||||||||||||||||||||||||| ||||||    
T  24414217 gtaaaattcattgaatttgattaggattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacga 24414119  T

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Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 652
Target Start/End: Original strand, 8582241 - 8582314
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatc 652  Q
    |||||||| ||| |||||||||||  |||| | |||||||||||||||||||||| |||| || ||||||||||    
T  8582241 ggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 9036801 - 9036757
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgc 424  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  9036801 ttgttgtcaaaaacctgacttaaatcctaaaattcaggattttgc 9036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 715
Target Start/End: Complemental strand, 22910123 - 22910063
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||| |||||||||||| ||||||||||||||||| |||||| |||| ||||||| |||||    
T  22910123 tcgactttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaa 22910063  T

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Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 23136348 - 23136396
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcga 426  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  23136348 cattattgtcaaaatcccgacttaaatcctaaaattcaggattttgcga 23136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 660 - 715
Target Start/End: Original strand, 15231835 - 15231890
Alignment:
Q  660 tttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||||| |||| |||| ||||||| |||||| ||||||||||||||||||    
T  15231835 tttgattgcgattttacaattttttatatcgattctacaaaagtagttgagtaaaa 15231890  T

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Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 715
Target Start/End: Original strand, 17566313 - 17566367
Alignment:
Q  661 ttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||||| |||| ||||||||||||  ||||| ||||||||||||||||||    
T  17566313 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaa 17566367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 703
Target Start/End: Original strand, 23142373 - 23142431
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  23142373 gtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 23142431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 31424366 - 31424436
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||  ||||||| |||||| || |||| ||||||||||||||||| | || |||||||||||||||    
T  31424366 gtaaaatctatcgatttggattgcaattttactatttcttatatcaattccacaagagtagttgagtaaaa 31424436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 517
Target Start/End: Original strand, 15231745 - 15231862
Alignment:
Q  400 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 499  Q
    ||||||||||| || | ||||||||||  ||||||||||||||||||| |||| |||| || ||||  |||||||  ||||||||     ||| ||||||    
T  15231745 taaatcctaaactttaagattttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgcg 15231844  T
Q  500 attttacgatttcttata 517  Q
    ||||||| |||| |||||    
T  15231845 attttacaattttttata 15231862  T

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Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 15231835 - 15231920
Alignment:
Q  595 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    |||||||||||||| |  |||| ||||||| |||||||| |||| || |||||||||| | |||||||  ||||||| ||||||||    
T  15231835 tttgattgcgattttacaattttttatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgatt 15231920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 666
Target Start/End: Complemental strand, 24056499 - 24056414
Alignment:
Q  581 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 666  Q
    ||||||| || |||| |||||||||||| |  |||| ||||||  |||||||| || | || ||||||||||||||||||||||||    
T  24056499 taaaatctatcgattatgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttcgattttgatt 24056414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 715
Target Start/End: Complemental strand, 7489215 - 7489143
Alignment:
Q  643 gagtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| | ||||||||||||||||| |||| ||||  |||||| |||||| ||||||  ||||||||||    
T  7489215 gagtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaa 7489143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 582 - 622
Target Start/End: Original strand, 31424261 - 31424301
Alignment:
Q  582 aaaatccattgattttgattgcgatttgatgatttcttata 622  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  31424261 aaaatccattgattttgattgcgattttacgatttcttata 31424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 678
Target Start/End: Original strand, 2040381 - 2040416
Alignment:
Q  643 gagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2040381 gagtaaaatccttcgattttgattgcgattttacga 2040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 678
Target Start/End: Complemental strand, 27836166 - 27836131
Alignment:
Q  643 gagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27836166 gagtaaaatccttcgattttgattgcgattttacga 27836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 703
Target Start/End: Original strand, 11879799 - 11879857
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||||||| |||||||||| |||||| |||| ||||  |||||| |||||||||||||    
T  11879799 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagt 11879857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 703
Target Start/End: Original strand, 11897215 - 11897273
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||||||| |||||||||| |||||| |||| ||||  |||||| |||||||||||||    
T  11897215 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagt 11897273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 15294868 - 15294938
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| | ||||||| ||||||| ||| ||||||||||||  |||||| ||||||  ||||||||||    
T  15294868 gtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaa 15294938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 15475237 - 15475307
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| | ||||||| ||||||| ||| ||||||||||||  |||||| ||||||  ||||||||||    
T  15475237 gtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaa 15475307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 580 - 680
Target Start/End: Original strand, 31424366 - 31424463
Alignment:
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgat 679  Q
    |||||||| || ||||| |||||| |||| |  ||||||||||||||||| |||  ||| || ||||||||||||    ||||||||||||| |||||||    
T  31424366 gtaaaatctatcgatttggattgcaattttactatttcttatatcaattccacaagagtagttgagtaaaatcct---gttttgattgcgattttacgat 31424462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 616 - 678
Target Start/End: Complemental strand, 40541714 - 40541652
Alignment:
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||| |||||||||||||  | || ||||||| ||| |||||||||||||| ||||||    
T  40541714 tcttatatcgattctacagaagtccttgaataaaatctttcaattttgattgcgattttacga 40541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 1e-83; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 378 - 680
Target Start/End: Complemental strand, 5362093 - 5361795
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    ||| |||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||           
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttt-taacatatatttagtattttt---cttt 5361898  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     ||| |||||||| || |||||||||||||| | |||||| |||||| |||||||| |||| || |||||||| |||||||||||| |||| || |||||    
T  5361897 tggtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacg 5361798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 678
Target Start/End: Complemental strand, 9911518 - 9911243
Alignment:
Q  401 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcga 500  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |  |||||||||||||||||| ||||| |  ||||||||| |||||| |||||||    
T  9911518 aaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggcaaaatccatcgattttgattgcga 9911419  T
Q  501 ttttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgat 600  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||       |||||| ||||| |||||||||    
T  9911418 ttttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaagtattatta-ttttttggtaaagtccatcgattttgat 9911321  T
Q  601 tgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||| |  |||||||||||| |||||||| ||||  ||||||||||||||||| |||| |||||||| ||||||    
T  9911320 tgcgattttacaatttcttatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacga 9911243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 381 - 678
Target Start/End: Original strand, 5375666 - 5375962
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 480  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||||||||||||||||||||||||| |||| |||| ||||||   |||||||| ||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  481 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 580  Q
    | ||| || ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||| |        ||    
T  5375766 ttcatcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatca-tttataacatatatttagtattaattttttttggg 5375864  T
Q  581 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||  |||||||||||||  | ||||||||||||||||||||||||||||| ||||||    
T  5375865 taaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacga 5375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 377 - 680
Target Start/End: Original strand, 10142897 - 10143199
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||| ||||||| ||| ||||| |||||||| |  ||||||||||||||| ||||||||| ||||||| ||||||||| ||| ||||||||||     
T  10142897 tcattgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagac 10142996  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 576  Q
    ||||||||| |||||| |||| |||||||||||||||||||||  ||||||| |||||||||||||||  |||||| |||||||||||||||||          
T  10142997 aaaatccatcgattttgattgtgattttacgatttcttataaatcaagtcatttatgactatatacca-attataatatatatttagtattatttttttt 10143095  T
Q  577 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
      | ||||||||||  |||||||||||||||| |  || ||||||||| |||||||| || | || || |||||||||||||||||||||||||| ||||    
T  10143096 ttgataaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaatccttcgattttgattgcgattttac 10143195  T
Q  677 gatt 680  Q
    ||||    
T  10143196 gatt 10143199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 379 - 678
Target Start/End: Original strand, 9770112 - 9770409
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||| ||||||  ||| ||||| |||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    |||| ||  ||||| |||||||||||||||||||||||||||||||| |  ||||||||||||||| || |||||||||||||||||||| |            
T  9770212 aatctatcaattttgattgcgattttacgatttcttataaactaagttacttatgactatatacca-ttcataacatatatttagtattaat-ttttttg 9770309  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||| ||| ||||||||||||||||| |  ||||  |||||| |||||||| |||   | ||||||||||||||||||||||||||||| ||||||    
T  9770310 ggtaaaattcatcgattttgattgcgattttacaatttgctatatcgattctacaaaagaccttgagtaaaatccttcgattttgattgcgattttacga 9770409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 378 - 568
Target Start/End: Original strand, 13023566 - 13023758
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaa-ttcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatccc--aaaatag 474  Q
    |||||||||||||||||  || |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 568  Q
    | |||||| || |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatatacca-tttataacatatatttagtatta 13023758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 378 - 678
Target Start/End: Original strand, 36120823 - 36121120
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||| | ||  |||||  ||||||| |||||||||||| |||||||||||||||||||| ||||||||| || ||| | ||||||   |    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||| ||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||          
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatatacca-tttataaaatatatttagtattatta--tttt 36121019  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| || ||||| ||||  | |||||||||| ||||||||||||| |||| |||||    
T  36121020 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacg 36121119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 380 - 680
Target Start/End: Original strand, 17466080 - 17466378
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    ||||||||||||| |  || |||||| ||||||| |||||||||||| |||||||| ||| || |||||||||||||| |||||||| ||||||   |||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 579  Q
    |||||| |||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||             
T  17466180 atccatcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatatacca-tttataacatatatttaatattatt-tttttgtt 17466277  T
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgat 679  Q
    ||||||||||| |||||||||||| |||| |  |||||||||||| |||| ||| |||| || ||||| |||| ||| |||||| |||| || |||||||    
T  17466278 gtaaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagtataatctttcaattttgtttgcaattttacgat 17466377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 378 - 567
Target Start/End: Original strand, 8889227 - 8889415
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||| ||||||||||| ||| ||||||||||||| |||||||||| || |||||||||| |||||||||||||| |||| ||||||||||||||||  |    
T  8889227 cattgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggca 8889326  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 567  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  8889327 aaattcatcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatatacca-tttataatatatatttagtatt 8889415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 377 - 678
Target Start/End: Complemental strand, 23065094 - 23064793
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||| |||| || ||| ||||| ||||||| ||| ||||||  ||||||||||| ||||||||||||||||||| ||||||| | |||||||      
T  23065094 tcattgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggt 23064995  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaac--taagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
     |||||||| |||||||||||| |||||||||||||||||||||  |||||||| ||||||  |||| || ||||||||||||||||||||||||||       
T  23064994 caaatccatcgattttaattgcaattttacgatttcttataaactataagtcatttatgaccctatatca-tttataacatatatttagtattatta-tt 23064897  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 674  Q
        |||||||||  | |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | || ||||||||||| |||||||||||||| ||    
T  23064896 ttttggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatccttcaattttgattgcgatttt 23064797  T
Q  675 acga 678  Q
    ||||    
T  23064796 acga 23064793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 377 - 528
Target Start/End: Complemental strand, 13551753 - 13551602
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||  ||| || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||     
T  13551753 tcattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagac 13551654  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 528  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13551653 aaaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 13551602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 378 - 680
Target Start/End: Original strand, 37240261 - 37240538
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||| |||||||  || |||||||||||||| ||    || ||||||| |||||||||||||||||||||||||||||||| ||||||||||  |    
T  37240261 cattgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaa-cccaaaataggca 37240355  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
     ||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| |||||||||||||||||||          
T  37240356 taattcatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactctatacca-tttatatcatatatttagtattattat----- 37240449  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttc-ttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
                   |||||||||| ||||| | |||||| ||||||| |||||||| |||| || ||||||||||||||||||||||||||||| ||||    
T  37240450 ---------------attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttac 37240534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 379 - 512
Target Start/End: Complemental strand, 8011345 - 8011212
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  479 aatccattgattttaattgcgattttacgatttc 512  Q
    ||| ||| |||||| ||||||||||| |||||||    
T  8011245 aattcatcgattttgattgcgattttgcgatttc 8011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 380 - 473
Target Start/End: Original strand, 7044728 - 7044821
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    ||||||||||||||| ||| ||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaata 7044821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 375 - 472
Target Start/End: Original strand, 24719513 - 24719610
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaat 472  Q
    |||||||||||||||||||  ||| ||| | |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  24719513 aatcattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 516 - 678
Target Start/End: Complemental strand, 8011129 - 8010968
Alignment:
Q  516 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 615  Q
    |||||||| |||| ||| | ||||||| |||| ||||||||||||||| ||||||        |||||||| ||| ||||||||||||||||| |  |||    
T  8011129 taaactaattcatttataattatatacaattt-ataacatatatttagcattatttttgttttggtaaaatacatcgattttgattgcgattttacaatt 8011031  T
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||| |||||| | || | || ||||||||||||||||||||||||||||| ||||||    
T  8011030 tcttatatcgattctataaaaatagttgagtaaaatccttcgattttgattgcgattttacga 8010968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 583 - 681
Target Start/End: Complemental strand, 6346882 - 6346784
Alignment:
Q  583 aaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    |||||||| ||||||||||||||||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||| ||| |||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattt 6346784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 530 - 681
Target Start/End: Original strand, 24719725 - 24719875
Alignment:
Q  530 tatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattc 629  Q
    ||||||||||||| |||| ||||||||||||||  ||||||        |||||||  ||| ||||||||||||||||| | ||||||||||||| ||||    
T  24719725 tatgactatatacaattt-ataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgattc 24719823  T
Q  630 tacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    |||| ||||  |||||||||||||||||||| ||||| |||| || ||||||    
T  24719824 tacaaaagtaatcgagtaaaatccttcgattgtgatttcgatttttcgattt 24719875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 378 - 483
Target Start/End: Complemental strand, 18459838 - 18459733
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||| ||||||| |||  |||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||| ||||||| |||||||  |    
T  18459838 cattgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggca 18459739  T
Q  478 aaatcc 483  Q
    ||||||    
T  18459738 aaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 379 - 473
Target Start/End: Original strand, 4156763 - 4156857
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    |||||||||||||||| ||| |||||| ||||||| ||||||||  |||||| |||||||| |||||||||||||  ||||||||||| ||||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaata 4156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  383 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 482  Q
    |||| ||||||| ||| ||||||||||||| ||| |||||| |||||| |||| ||| | ||||||||| ||||||||||||||||||||||  ||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  483 c 483  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 377 - 484
Target Start/End: Complemental strand, 6347195 - 6347088
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    ||||| |||||||||| |  || ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||  || || ||||||||      
T  6347195 tcattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatagccgagtctcaaaataggt 6347096  T
Q  477 aaaatcca 484  Q
    ||||||||    
T  6347095 aaaatcca 6347088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 8011066 - 8010996
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | ||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||    
T  8011066 gtaaaatacatcgattttgattgcgattttacaatttcttatatcgattctataaaaatagttgagtaaaa 8010996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 579 - 671
Target Start/End: Original strand, 7044961 - 7045053
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    |||||||||||| |||||||||||  |||| | ||||||||||||| ||| | || |||| || |||||||||| ||||||||||||||||||    
T  7044961 ggtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgattgcgat 7045053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 648 - 715
Target Start/End: Complemental strand, 5361892 - 5361825
Alignment:
Q  648 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||| |||| |||||||||||| |||||||||| |||||| |||||| ||||||||||||||||||    
T  5361892 aaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaa 5361825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 648 - 715
Target Start/End: Complemental strand, 6346882 - 6346815
Alignment:
Q  648 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||| ||||||||||||||||| |||| |||||||||||  |||||| ||||||||||||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaa 6346815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 459
Target Start/End: Original strand, 7452418 - 7452499
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagt 459  Q
    |||||||||| ||||||| ||| ||||| ||||||| ||| ||||||| ||||| ||||||||||||||||| ||||||||||    
T  7452418 tcattgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagt 7452499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 667
Target Start/End: Complemental strand, 9149709 - 9149565
Alignment:
Q  523 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttg-atgatttcttat 621  Q
    |||||| ||| ||||||||| |||| ||||||||||||||| ||||||        ||||||||| ||  |||||||||||| |||  | ||||||||||    
T  9149709 agtcatttataactatatacaattt-ataacatatatttagcattatttttcttttggtaaaatctatcaattttgattgcgttttttacgatttcttat 9149611  T
Q  622 atcaattctacagaagtggtcgagtaaaatccttcgattttgattg 667  Q
    ||| |||||||  |||| || |||||||||||||| ||||||||||    
T  9149610 atcgattctacgaaagtagttgagtaaaatccttcaattttgattg 9149565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 715
Target Start/End: Original strand, 24719784 - 24719844
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||||| | ||||||||    
T  24719784 tcgattttgattgcgattttacgatttcttatatcgattctacaaaagtaatcgagtaaaa 24719844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 712
Target Start/End: Original strand, 17466278 - 17466345
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagta 712  Q
    ||||||||| |||||||||||||| || |||| |||||||||||| |||| | |||||||||||||||    
T  17466278 gtaaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagta 17466345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 7044962 - 7045032
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||||||||||||  || ||||||||||||||||| ||| |  ||||||||||||||||||    
T  7044962 gtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaa 7045032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 681
Target Start/End: Original strand, 10394824 - 10394910
Alignment:
Q  595 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||  |||| | |||||| |||| | |||||||| |||| || ||||||| ||||||||||||||||||||| |||||||||    
T  10394824 tttgattgtaattttacgatttcctataccgattctacaaaagtagttgagtaaagtccttcgattttgattgcgattttacgattt 10394910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 616 - 678
Target Start/End: Original strand, 55476223 - 55476285
Alignment:
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  55476223 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 55476285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 452
Target Start/End: Complemental strand, 9149864 - 9149791
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 452  Q
    ||||| |||||||||| ||| |||||||||||||| |||||||||||||||| |  |||||||| || ||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttatctaccttcaaagaatcaaat 9149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 611 - 680
Target Start/End: Complemental strand, 18459530 - 18459461
Alignment:
Q  611 tgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||||||||||||||||| || | ||  ||| ||||||||||||||| |||||||| ||||||||    
T  18459530 tgatttcttatatcaattctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgatt 18459461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 681
Target Start/End: Original strand, 7045078 - 7045244
Alignment:
Q  516 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 615  Q
    |||||| |||||| ||| ||||||||| | || ||||||||||||||  ||||||        ||||| |||||| |||||||||||  |||| | ||||    
T  7045078 taaactgagtcatttatcactatatacaaatt-ataacatatatttaacattatttttgttttggtaagatccatagattttgattgatattttacgatt 7045176  T
Q  616 tcttatatca--attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    |||||||||   |||||  | |||  || ||||||||||||||||||||||||||||| ||| |||||    
T  7045177 tcttatatctcgattcttgaaaagcagttgagtaaaatccttcgattttgattgcgattttatgattt 7045244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 582 - 681
Target Start/End: Original strand, 7452707 - 7452805
Alignment:
Q  582 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||| ||||||  ||| | ||| | |||||| |||||  |||||||| |||| || ||||||| ||||||||||||||||||||| |||||||||    
T  7452707 aaaatccatcgattttagttgtgcttttacgatttcgtatattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacgattt 7452805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 703
Target Start/End: Complemental strand, 9911341 - 9911283
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  9911341 gtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 9911283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 36121022 - 36121092
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| || ||| ||||||  ||||||||||    
T  36121022 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaa 36121092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 37240450 - 37240508
Alignment:
Q  658 attttgattgcgatattacgatttctt-atatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||| ||| |||||||||||| ||||| |||||| ||||||||||||||||||    
T  37240450 attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaa 37240508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 715
Target Start/End: Original strand, 10143100 - 10143169
Alignment:
Q  646 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||| || |||||||||||||| |||| || ||||||||| |||||| |||| ||||||| |||||    
T  10143100 taaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaa 10143169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 684
Target Start/End: Original strand, 4157050 - 4157090
Alignment:
Q  644 agtaaaatccttcgattttgattgcgatattacgatttctt 684  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  4157050 agtaaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Complemental strand, 9911442 - 9911402
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  9911442 aaaatccatcgattttgattgcgattttacgatttcttata 9911402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 9149653 - 9149582
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatatt-acgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||  || |||||||||||| | || ||||||||||||||| ||||||  |||||||||||||||||    
T  9149653 gtaaaatctatcaattttgattgcgttttttacgatttcttatatcgattctacgaaagtagttgagtaaaa 9149582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 681
Target Start/End: Complemental strand, 5943166 - 5943088
Alignment:
Q  603 cgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    |||||| | ||||||||| | | |||||||| |||| || |||||||||||||| |||||  ||||||| |||||||||    
T  5943166 cgattttacgatttcttaaaccgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgattt 5943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 703
Target Start/End: Complemental strand, 23064891 - 23064833
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    |||||||| ||||||||||||||| || |||| ||||| |||||| |||||| ||||||    
T  23064891 gtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagt 23064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 514
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  477 aaaatccattgattttaattgcgattttacgatttctt 514  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 678
Target Start/End: Complemental strand, 13551541 - 13551504
Alignment:
Q  641 tcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  13551541 tcgagtaaaatccttcgattttaattgcgattttacga 13551504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 655 - 688
Target Start/End: Original strand, 36120930 - 36120963
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatat 688  Q
    ||||||||||||||||| ||||||||||||||||    
T  36120930 tcgattttgattgcgattttacgatttcttatat 36120963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 1e-83; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 379 - 678
Target Start/End: Original strand, 23528656 - 23528953
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    ||||||||||||||||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    |||| || |||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||| ||||||||           
T  23528756 aatctatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatatacca-tttataacgtatatttattattatta-ttattg 23528853  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  23528854 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 23528953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 375 - 678
Target Start/End: Complemental strand, 16125591 - 16125287
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt---caccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||  |||||||||||| ||||  ||||    
T  16125591 aatcattattttcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaa 16125492  T
Q  472 tagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 571  Q
    |||  |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  16125491 taggcaaaatccattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatatacca-tttataacatatatttagtattatta 16125393  T
Q  572 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
           |||||  ||||| ||||||||||||||||| |  |||||||||||| |||||||| | ||  | |||||||||||||||||||||||||||||    
T  16125392 -tttttgggtaacgtccatcgattttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgat 16125294  T
Q  672 attacga 678  Q
     ||||||    
T  16125293 tttacga 16125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 378 - 678
Target Start/End: Original strand, 13100190 - 13100487
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    |||| ||||||||||||  || ||||| |||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  |    
T  13100190 cattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggca 13100289  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    ||| |||| |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||  |||          
T  13100290 aaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatatacca-tttgtaacatatatttagtat--ttatttttt 13100386  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||||||||||| ||||||||||||||||| | ||||||||||||| |||||||| | ||  | ||||||||||||| ||||||||||||||| |||||    
T  13100387 gggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttacg 13100486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 378 - 682
Target Start/End: Complemental strand, 25146898 - 25146596
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    || | |||  ||||||||||||| |||||||||||||||||||||||| || |||||||||||| || |||||||| |||||||||||| | |           
T  25146798 aagtacatcaattttaattgcga-tttacgatttcttataaactaagttatttatgactatata-caatttataacgtatatttagtatcaat-tttttt 25146702  T
Q  578 nggtaaaatccattgattttgattgcga-tttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
     |||||||||||| |||||||||||||| ||| |  ||||  |||||| |||||||  |||   | ||||||||||||||||||||||||||||| ||||    
T  25146701 gggtaaaatccatcgattttgattgcgatttttagaattttctatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttac 25146602  T
Q  677 gatttc 682  Q
    ||||||    
T  25146601 gatttc 25146596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 377 - 678
Target Start/End: Complemental strand, 9955166 - 9954865
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    ||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||       
T  9955166 tcattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagc 9955067  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 576  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||         
T  9955066 aaaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatatacca-tttataacatatattcagtattattattttt 9954968  T
Q  577 nng-gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatta 675  Q
      | ||||||||||| ||| ||||||||||||| |  ||||| |||||  |||||  | ||||  |   ||||||||||||||||||||||||||| |||    
T  9954967 ttgtgtaaaatccatcgatcttgattgcgattttacaatttcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgattgcgatttta 9954868  T
Q  676 cga 678  Q
    |||    
T  9954867 cga 9954865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 378 - 678
Target Start/End: Complemental strand, 9352193 - 9351895
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||| |    
T  9352193 cattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagaca 9352094  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||| | |||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |           
T  9352093 aaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatatacca-tttataacatatatttagtattaat-tttttt 9351996  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||||||| ||| ||||||||||| ||||| |  ||||| |||||  |||||||| ||||  | |  ||||||||| |||||||||||||||| |||||    
T  9351995 gggtaaaattcatcgattttgattgtgattttacaatttcctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttacg 9351896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 378 - 681
Target Start/End: Complemental strand, 18304941 - 18304640
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttc-aacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||  || ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||     
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 576  Q
    |||||||||  ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||| || ||||| |||||||||||||| |          
T  18304841 aaaatccatcaattttgattgcga-tttacgatttcttataagctaagtcatttatgactatatacca-ttcataacgtatatttagtattaat-ttttt 18304745  T
Q  577 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
      | |||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  |  ||||||||||||||||||||| |||||| ||||    
T  18304744 ttgataaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgattttac 18304645  T
Q  677 gattt 681  Q
    |||||    
T  18304644 gattt 18304640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 375 - 671
Target Start/End: Complemental strand, 21846401 - 21846113
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  21846401 aatcattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatag 21846302  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
    ||||||||||| |||||| |||||||||||   |||| | ||||||   ||||| ||| ||||||||  | ||||||||||||||||||||||| |        
T  21846301 aaaaaatccatcgattttgattgcgatttt---atttttcataaac---gtcatttataactatata-taatttataacatatatttagtattaat-ttt 21846210  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
        |||||||| |||  |||||||||||||||| |  |||||||||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  21846209 tttgggtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgat 21846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 376 - 608
Target Start/End: Complemental strand, 9327347 - 9327116
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    ||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  9327347 atcattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaataga 9327248  T
Q  476 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattattann 573  Q
     ||||||||| |||||| ||||||||||||||||||||||||||||||||||  | | ||||||||||||| ||||||| |||||||||||||||||       
T  9327247 caaaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatatacca-tttataatatatatttagtattatt--t 9327151  T
Q  574 nnnnnggtaaaatccattgattttgattgcgattt 608  Q
         |||||||| ||| |||||||||||||||||    
T  9327150 ttttgggtaaaattcatcgattttgattgcgattt 9327116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 381 - 678
Target Start/End: Complemental strand, 19010073 - 19009780
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 480  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||| | ||||||   ||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  481 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 580  Q
    ||||| |||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||||  ||||||| |||| ||        ||    
T  19009973 tccatcgattttgattgcgattttacgatttcttataaattaagtcatttataactatatacca-tttataac--atatttaatatt-ttttttttgggg 19009878  T
Q  581 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||| |||||||||||||||||| |  ||||| |||||| ||| |||| ||||  | ||||||||||||| ||||||||||||||| ||||||    
T  19009877 taaaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacga 19009780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 379 - 633
Target Start/End: Complemental strand, 13276395 - 13276143
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||  |||||||||||||  ||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||  ||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    |||| || |||||| |||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||||||           
T  13276295 aatcaatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatca-tttataacatatatttagtattatta-tttttt 13276198  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctaca 633  Q
    |||| | ||||| |||||||||||| |||| |  |||||||||||| ||||||||    
T  13276197 ggtatagtccatcgattttgattgcaattttacaatttcttatatcgattctaca 13276143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 380 - 678
Target Start/End: Complemental strand, 42180193 - 42179903
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||  |||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 579  Q
    || ||| |||||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||         |    
T  42180093 atacatcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagtattatattttttttg 42179995  T
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||| ||||||||||| | ||| |  ||||| ||       |||||| ||||  |||| |||||||||||||||||||||||||| ||||||    
T  42179994 gtaaaatccatcgattttgattgtggttttacaatttccta-------tctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacga 42179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 381 - 676
Target Start/End: Original strand, 12513283 - 12513566
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 480  Q
    |||||||||||||| ||| ||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||   ||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  481 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 580  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||  ||||||| ||||||         ||    
T  12513383 tccatcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatatacca-tatataac--atatttaatattat--attttttgg 12513477  T
Q  581 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
    ||||||| || ||||||||||||||||| |  ||||||||       ||||||||||| || ||||||||||||| ||||||| ||||||| ||||    
T  12513478 taaaatctatcgattttgattgcgattttacaatttctta-------tctacagaagtagttgagtaaaatcctttgattttggttgcgattttac 12513566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 478 - 680
Target Start/End: Original strand, 47785958 - 47786157
Alignment:
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||           
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt--ttttg 47786054  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||||||||||| |||||| ||| ||||||  ||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| ||| |||||    
T  47786055 tggtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacg 47786154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 379 - 571
Target Start/End: Complemental strand, 9128969 - 9128778
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||| ||||||  ||| |||||||||||| | ||||| |||||||||||||||| || ||||||||||||  |||||||||||  |||||||| ||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaa 9128870  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 571  Q
    ||| ||| |||||| |||||||||| ||||||||||||||||||||| || | ||||||||||||| |||||||||||| |||||||||||||    
T  9128869 aattcatcgattttgattgcgatttgacgatttcttataaactaagttatttttgactatatacca-tttataacatatctttagtattatta 9128778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 380 - 677
Target Start/End: Complemental strand, 17869873 - 17869583
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    ||||||||||||||||||| |||||| ||||     ||||||||||||||||||||||||| |||||  ||||||| |||||||||| |||||||  |||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 579  Q
    || | | |||||| ||||| ||||||||||||||| ||||||||||| | ||| || |||||| | |||| |||||||||||||||||||||       |    
T  17869778 attcttcgattttgattgcaattttacgatttcttttaaactaagtcttttataaccatatacta-tttacaacatatatttagtattatta-ttttttg 17869681  T
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
    ||||||| ||| ||||||||||||||||| |  |||| ||| ||  |||||| | ||||  | ||||||||||||| ||||||||||||||| |||||    
T  17869680 gtaaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctttgattttgattgcgattttacg 17869583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 377 - 517
Target Start/End: Complemental strand, 41032801 - 41032661
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||  ||| |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||      
T  41032801 tcattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggc 41032702  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttata 517  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 468 - 680
Target Start/End: Original strand, 32881416 - 32881619
Alignment:
Q  468 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 567  Q
    |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||    
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatatacca-tttataacatatatttagtatt 32881514  T
Q  568 attannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 667  Q
     ||         |||||| |||||||||||||||||||||| |  |||||||||||| |||||||| | || || |||||||||||||||||||   |||    
T  32881515 ttt--------tgtaaaagccattgattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgatttcagttg 32881606  T
Q  668 cgatattacgatt 680  Q
    |||| ||||||||    
T  32881607 cgattttacgatt 32881619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 376 - 512
Target Start/End: Complemental strand, 17056131 - 17055995
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||||| | ||||| |||||||||||||||| ||||||||||||||   ||||||      
T  17056131 atcattgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataag 17056032  T
Q  476 aaaaatccattgattttaattgcgattttacgatttc 512  Q
     ||||||||| |||||| |||||||||||||||||||    
T  17056031 taaaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 579 - 681
Target Start/End: Original strand, 16434709 - 16434809
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||| ||||||| |||||||||||||||||  || | |||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||    
T  16434709 ggtagaatccatcgattttgattgcgattt--tgttatcttatatcaattctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacga 16434806  T
Q  679 ttt 681  Q
    |||    
T  16434807 ttt 16434809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 379 - 454
Target Start/End: Original strand, 30619075 - 30619150
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc 454  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 483
Target Start/End: Complemental strand, 18337652 - 18337547
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||| ||| || | |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||||      
T  18337652 tcattgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggc 18337554  T
Q  477 aaaatcc 483  Q
    |||||||    
T  18337553 aaaatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 379 - 474
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||| | | |||||||||||||  |||||||||||||||||||||  |||||||||||||||||| |||||||||  |||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 456 - 560
Target Start/End: Original strand, 18228278 - 18228380
Alignment:
Q  456 tagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacat 555  Q
    |||||||||||||||||||  |||||||||  ||||| |||| ||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaattaagttatttatgactatatacca-tttataacat 18228375  T
Q  556 atatt 560  Q
    |||||    
T  18228376 atatt 18228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 12800710 - 12800623
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc 466  Q
    |||||||| |||||||  || |||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcc 12800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 579 - 678
Target Start/End: Complemental strand, 17055850 - 17055751
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||  ||||||||||| |||| |  ||||||| |||| |||||||| |||| || ||||||||||||||||||||||||||||| ||||||    
T  17055850 ggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacga 17055751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 27917302 - 27917232
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | |||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||    
T  27917302 gtaaaattcatcgattttgattgcgataatacaatttcttatatcaattatacaaaagtagttgagtaaaa 27917232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 582 - 680
Target Start/End: Complemental strand, 41032701 - 41032603
Alignment:
Q  582 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||| |||||| |||||||||| |  |||||||||||| |||||||| || | || ||||||||| ||||||||||  ||||||| ||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgatt 41032603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 47786057 - 47786127
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||||||| ||| |||| ||  |||||||||||||||||||| ||||||||||||||||||    
T  47786057 gtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagtagttgagtaaaa 47786127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 715
Target Start/End: Original strand, 18228473 - 18228533
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||| ||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||    
T  18228473 tcgatgttgattgcgattttacgatttcttatatcgattctacaaaagaagttgagtaaaa 18228533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 647 - 715
Target Start/End: Complemental strand, 41032701 - 41032633
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| |||||||| |||||||| |||| |||||||||||| |||||| |||| |||||||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaa 41032633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 34478900 - 34478833
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacga 445  Q
    ||||||||| ||||||| ||| |||||| |||||||  |||||||| |||||||||||||||||||||    
T  34478900 cattgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 13100389 - 13100459
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| ||| ||  ||||||||||    
T  13100389 gtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaa 13100459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 17055849 - 17055779
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || ||||||||||| || |||| ||||||| |||| |||||| ||||||||||||||||||    
T  17055849 gtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaa 17055779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 23528855 - 23528925
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  23528855 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 23528925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 715
Target Start/End: Original strand, 32881531 - 32881589
Alignment:
Q  657 gattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||||||||| |||| |||||||||||| |||||| ||| ||||||||||||||    
T  32881531 gattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaa 32881589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 667
Target Start/End: Complemental strand, 14074397 - 14074326
Alignment:
Q  596 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 667  Q
    ||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||    
T  14074397 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattg 14074326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 30619145 - 30619211
Alignment:
Q  648 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||||||| ||||||||| |||| |||| | ||||| |||||| ||||||||||||||||||    
T  30619145 aaatccttcgattt-gattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaa 30619211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 377 - 424
Target Start/End: Original strand, 47785790 - 47785837
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgc 424  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||    
T  47785790 tcattgttgtcaaaatcccaacataaatcctaaaattcaggattttgc 47785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 21846204 - 21846134
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | || |||||||||||||| |||| |||||||||||| |||||| ||||||  ||||||||||    
T  21846204 gtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaa 21846134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 471
Target Start/End: Original strand, 8772715 - 8772796
Alignment:
Q  390 aatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||| ||| ||||||| ||||| ||| ||||||||||||| |  | ||||||| |||||||||||||| ||| ||||||||    
T  8772715 aatcccgacttaaatcccaaaatccagaattttgcgactttgtgtagcttcaacaactcaaatccatagcagagtcccaaaa 8772796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 703
Target Start/End: Complemental strand, 18304740 - 18304683
Alignment:
Q  646 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    |||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  18304740 taaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 18304683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 471
Target Start/End: Original strand, 24117006 - 24117099
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||||||||||| |  |  ||||| |||||||| | |||||| | ||||| |||||||||||||| ||||||  ||| |||||||||||||    
T  24117006 cattgttgtcaaaattccaatttaaattctaaaatttaagattttacaactttattcaccttcaacgattcaaatttatattagaatcccaaaa 24117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 30619156 - 30619240
Alignment:
Q  595 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    |||||||||||||| |  |||| | ||||| |||||||| |||| || ||||||||||||||||||||  ||||||| ||||||||    
T  30619156 tttgattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcgat-ttacgatt 30619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Complemental strand, 9327246 - 9327206
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  9327246 aaaatccatcgattttgattgcgattttacgatttcttata 9327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Complemental strand, 9955066 - 9955026
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  9955066 aaaatccatcgattttgattgcgattttacgatttcttata 9955026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Original strand, 12513379 - 12513419
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  12513379 aaaatccatcgattttgattgcgattttacgatttcttata 12513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 715
Target Start/End: Complemental strand, 16125375 - 16125315
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||||||||||| |||| |||||||||||| |||||| ||| ||  ||||||||||    
T  16125375 tcgattttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaa 16125315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Complemental strand, 19009977 - 19009937
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  19009977 aaaatccatcgattttgattgcgattttacgatttcttata 19009937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 465
Target Start/End: Complemental strand, 27917578 - 27917495
Alignment:
Q  382 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 465  Q
    ||||||||||||| ||| ||||| || ||||  |||||||||||| ||| || ||||||||| || ||||| ||||| ||||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaatc 27917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 644 - 682
Target Start/End: Complemental strand, 17056033 - 17055995
Alignment:
Q  644 agtaaaatccttcgattttgattgcgatattacgatttc 682  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  17056033 agtaaaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 17869680 - 17869610
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | ||||||||||||||||| |||| |||| ||| ||  |||||||||||||  ||||||||||    
T  17869680 gtaaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaa 17869610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 471
Target Start/End: Complemental strand, 27502273 - 27502239
Alignment:
Q  437 cttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    |||||||||||||||||||||| ||||||||||||    
T  27502273 cttcaacgactcaaatccatagcagaatcccaaaa 27502239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 155; Significance: 7e-82; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 375 - 678
Target Start/End: Original strand, 8439 - 8738
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    ||||||||||||||||||||  || ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||     
T  8439 aatcattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataa 8538  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||        
T  8539 gcaaaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataccatatatttagtattatt---t 8634  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 674  Q
        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||  || |  | |||||||||||||| |||||||||||||| ||    
T  8635 ttttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgatttt 8734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 8640 - 8710
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| ||||||  ||| || ||||||||||    
T  8640 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaa 8710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 7e-82; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 379 - 671
Target Start/End: Original strand, 43234868 - 43235158
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||||||| |||||| |||| |||||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||| ||| ||||||||           
T  43234968 aatccatcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaacca-tttataacatatacttactattatta-tctttt 43235065  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    ||||||||| || ||||||||||||||||| |  |||| ||||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  43235066 ggtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 43235158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 380 - 678
Target Start/End: Original strand, 18843716 - 18844012
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    ||||||| ||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 579  Q
    || ||| |||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |        |    
T  18843816 attcatcgattttgattgcaattatacgatttcttataaactaagtcatttatgattatatacca-tttataacatatatttagtattaat-ttttttgg 18843913  T
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||| ||||||||||||||||| |  ||||| |||||  |||||||| ||||  | ||||||||| || |||||||||||||||| ||||||    
T  18843914 gtaaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacga 18844012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 378 - 680
Target Start/End: Complemental strand, 21059285 - 21058986
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||  |||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||  |    
T  21059285 cattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggca 21059187  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||| ||           
T  21059186 aaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaacca-tttataacatatatttagtattttt--ttttg 21059090  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagt-aaaatccttcgattttgattgcgatattac 676  Q
      ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||| ||  ||| |||||| |||||||||| ||||||| ||||    
T  21059089 ttgtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaaaatctttcgattttggttgcgattttac 21058990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 378 - 671
Target Start/End: Original strand, 19578941 - 19579233
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||| |  || |||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||   |    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||||||||||||| ||||||||           
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttacca-ttcataacatatatttggtattattttttttt 19579139  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
     |||||||||||| ||||||||||||||||| |  ||||  |||| | |||||||| ||||  | |||| ||||||||||||||||||||||||    
T  19579140 tggtaaaatccatcgattttgattgcgattttacaattttctataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgat 19579233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 380 - 671
Target Start/End: Complemental strand, 23172560 - 23172267
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  480 ----atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 575  Q
        ||| || |||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||| |         
T  23172460 attcatcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatatacca-tttgtaacatatatttaatattaat-tttt 23172363  T
Q  576 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
       |||||||| ||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| |||||||||||||| ||||    
T  23172362 ttgggtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgattacgat 23172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 375 - 671
Target Start/End: Complemental strand, 18051663 - 18051372
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||    
T  18051663 aatcattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaatag 18051564  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
      ||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||   | ||||||||||||||||||||||||||       
T  18051563 gcaaaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atat---aatttataacatatatttagtattatta-tt 18051469  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
        ||| |||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  |  | |||||| ||| |||||||||||||||    
T  18051468 ttttggttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagtccttcaataaaattctttgattttgattgcgat 18051372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 387 - 681
Target Start/End: Complemental strand, 27340307 - 27340016
Alignment:
Q  387 caaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccatt 486  Q
    |||||||| ||| |||||| ||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||  |||||||  ||||| |||     
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  487 gattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta--nnnnnnnggtaaa 584  Q
    |||||| |||| |||||||  |||||||||||||||||||||     ||||||||||||||  ||||||||||||||||||||||          |||||    
T  27340207 gattttgattgagattttaatatttcttataaactaagtcatt----actatataccatttg-taacatatatttagtattattattatttttttgtaaa 27340113  T
Q  585 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||| || ||||||||||||||||| |  ||||||||||||||||||||| ||||    ||||||||||||||||||||||||||||| | |||||||    
T  27340112 atctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttcacgattt 27340016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 379 - 671
Target Start/End: Complemental strand, 38158383 - 38158103
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||| | ||| |||||||||||||  ||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||| ||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaa 38158284  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||||||||||||||  |||  |||||||||||||||||||||||| |||| ||||||||          |||||||||||||||||||||||            
T  38158283 aatccattgattttggttgttattttacgatttcttataaactaaatcatttatgacta----------tataacatatatttagtattatt--tttttt 38158196  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    ||||||||||||  |||||||||| ||||| |  |||||||| ||  |||||||| || | || ||||||||||||||||||||| |||||||    
T  38158195 ggtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatccttcgattttggttgcgat 38158103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 400 - 671
Target Start/End: Complemental strand, 41688772 - 41688505
Alignment:
Q  400 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 499  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| ||||  |||||| ||| | ||||||   ||||| ||| |||||| ||||||    
T  41688772 taaatcctaaaattc-ggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgattgcg 41688674  T
Q  500 attttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttga 599  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||| || ||||||||||||||||||||||        |||||||| ||| ||||||||    
T  41688673 attttacgatttcttataaactaaatcatttataactatatacca-ttcataacatatatttagtattatt--ttttttggtaaaattcatcgattttga 41688577  T
Q  600 ttgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    ||||||||| |  ||||  |||||| |||||||| ||||  |  |||||||||||||||||||| |||||||    
T  41688576 ttgcgattttacaattttctatatcgattctacaaaagtccttaagtaaaatccttcgattttggttgcgat 41688505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 378 - 545
Target Start/End: Complemental strand, 22645849 - 22645681
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||   |    
T  22645849 cattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagta 22645750  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaa-gtcatctatgactatataccat 545  Q
    || |||||  ||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  22645749 aattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatataccat 22645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 428 - 571
Target Start/End: Original strand, 19979648 - 19979790
Alignment:
Q  428 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 527  Q
    |||||||| |||||||||||||||| ||| |||||||||||||| |   ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtca 19979747  T
Q  528 tctatgactatataccattttataacatatatttagtattatta 571  Q
    | ||||||||||||||| ||||||||||||||||| ||||||||    
T  19979748 tttatgactatatacca-tttataacatatatttattattatta 19979790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 428 - 671
Target Start/End: Original strand, 20320992 - 20321233
Alignment:
Q  428 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 527  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||| ||||| |||  | ||| ||||||||||||||| ||||||||||||||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga-ttcttataaactaagtca 20321090  T
Q  528 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 627  Q
    | |||||| ||||| || ||||||||||||||||| ||||| |        |||||||||||| ||||||||||||||||| |  ||||| |||||  ||    
T  20321091 tttatgaccatatatca-tttataacatatatttaatattaattttttctgggtaaaatccatcgattttgattgcgattttacaatttcctatatagat 20321189  T
Q  628 tctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    |||||| ||||  |  ||||||||||||| ||||||||||||||    
T  20321190 tctacaaaagtccttcagtaaaatccttcaattttgattgcgat 20321233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 379 - 504
Target Start/End: Original strand, 20923718 - 20923843
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||  ||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  479 aatccattgattttaattgcgatttt 504  Q
    | ||||| |||||| |||||||||||    
T  20923818 agtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 681
Target Start/End: Complemental strand, 43005823 - 43005688
Alignment:
Q  546 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 645  Q
    |||||||||||||||||| ||||||        |||| ||||||| |||||| |||||||||| | |||||| |||||| |||||||| |||  || |||    
T  43005823 tttataacatatatttagcattatttttgttttggtacaatccatcgattttaattgcgattttacgatttcctatatcgattctacaaaagaagttgag 43005724  T
Q  646 taaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||| ||| |||||||||||||| |||| ||||    
T  43005723 taaaatctttcaattttgattgcgattttacaattt 43005688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 24106645 - 24106714
Alignment:
Q  383 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 452  Q
    |||||||||||||||  |||||| |||||||||||||||||| ||||||||||||  |||||||||||||    
T  24106645 ttgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatc 453  Q
    ||||||||||||||  || ||||| |||||||| | ||||||| |||||||||||||||||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 445
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacga 445  Q
    ||||||||||||||  ||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 21059087 - 21059017
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||  ||||||||||| ||||||| |||||||||| |||||||    
T  21059087 gtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaaa 21059017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 41427657 - 41427716
Alignment:
Q  619 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||| |||||||| ||||  ||||||||||||||||||||||||||||||| ||||||    
T  41427657 tatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttacga 41427716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 649 - 715
Target Start/End: Complemental strand, 43005785 - 43005719
Alignment:
Q  649 aatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||| |||||||| |||||||| |||||||||| |||||| |||||| ||||| ||||||||||||    
T  43005785 aatccatcgattttaattgcgattttacgatttcctatatcgattctacaaaagaagttgagtaaaa 43005719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 18843914 - 18843984
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||  |||||| ||||||  ||||||||||    
T  18843914 gtaaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaa 18843984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 23172358 - 23172288
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  23172358 gtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaa 23172288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 703
Target Start/End: Complemental strand, 27340117 - 27340059
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||||||  ||||||||||||||||| |||  ||||||||||||||||||| ||||||    
T  27340117 gtaaaatctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagt 27340059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 43235067 - 43235137
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||  ||||||||||||||||| |||| |||| ||||||| |||||| ||||||  ||||||||||    
T  43235067 gtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaa 43235137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 681
Target Start/End: Original strand, 24648240 - 24648309
Alignment:
Q  612 gatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||| ||||||  |||||||| |||| || ||||||||||||| |||||||||| |||| |||||||||    
T  24648240 gattttttatattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattt 24648309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 678
Target Start/End: Complemental strand, 15051981 - 15051929
Alignment:
Q  626 attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  15051981 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 15051929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 667
Target Start/End: Original strand, 19377838 - 19377889
Alignment:
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 667  Q
    ||||||||| |||||||| ||||  | |||||||||||||||||||||||||    
T  19377838 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattg 19377889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 520
Target Start/End: Complemental strand, 19042448 - 19042406
Alignment:
Q  478 aaatccattgattttaattgcgattttacgatttcttataaac 520  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaac 19042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 703
Target Start/End: Original strand, 20321142 - 20321200
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 703  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||  |||||| ||||||    
T  20321142 gtaaaatccatcgattttgattgcgattttacaatttcctatatagattctacaaaagt 20321200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 38158194 - 38158124
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||| ||| |||| |||||||| ||  |||||| |||| |||||||||||||    
T  38158194 gtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaa 38158124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 517
Target Start/End: Complemental strand, 43005785 - 43005747
Alignment:
Q  479 aatccattgattttaattgcgattttacgatttcttata 517  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  43005785 aatccatcgattttaattgcgattttacgatttcctata 43005747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 1e-77; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 379 - 671
Target Start/End: Complemental strand, 15528239 - 15527949
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||  |||||||| ||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||  |           
T  15528139 aatccatcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatatacca-tttataacatatatttagtatta-aattttttg 15528042  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    ||  |||||||| ||||| ||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  15528041 ggggaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgat 15527949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 378 - 680
Target Start/End: Original strand, 23897810 - 23898109
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||  || |||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||       
T  23897810 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 23897909  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||           
T  23897910 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt-ttttttttt 23898007  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || ||||||||||||||||||||| || |||| |||||    
T  23898008 tggtaaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttggtttcgattttacg 23898106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 378 - 680
Target Start/End: Complemental strand, 30912542 - 30912236
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  |    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||| |||||||||||||||||||           
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatca-tttatcacatatatttagtattatttttttgt 30912344  T
Q  578 ng-----gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 672  Q
     |     ||||||||||| |||| |||||||||||  ||||||||||||||| ||| |||| |||| || || ||||||||||| |||||| ||| |||     
T  30912343 ggtaaaagtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagatt 30912244  T
Q  673 ttacgatt 680  Q
    ||||||||    
T  30912243 ttacgatt 30912236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 379 - 678
Target Start/End: Complemental strand, 26053425 - 26053128
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26053325 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26053228  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||| ||| ||||||    
T  26053227 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacga 26053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 379 - 678
Target Start/End: Complemental strand, 26073478 - 26073181
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26073378 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26073281  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||| ||| ||||||    
T  26073280 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacga 26073181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 378 - 678
Target Start/End: Original strand, 7223518 - 7223812
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||       || |||||||||||||||| ||||||||   |    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatat----atttagtattattann 573  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    |||||||||||||       
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaatttagtattatt--t 7223707  T
Q  574 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatat 673  Q
         ||||||||||||||||| |||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||| || |    
T  7223708 tgtttggtaaaatccattgattctgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattt 7223807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 376 - 671
Target Start/End: Complemental strand, 17543872 - 17543569
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||      
T  17543872 atcattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataag 17543773  T
Q  476 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta---- 571  Q
     |||||| || |||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||        
T  17543772 caaaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatatacca-tttataacatatatttagtattattatttt 17543674  T
Q  572 -----nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 666  Q
                |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  17543673 ttttttatttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 17543574  T
Q  667 gcgat 671  Q
     ||||    
T  17543573 tcgat 17543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 378 - 678
Target Start/End: Original strand, 19748332 - 19748630
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||| ||||||||| ||| |||||| || ||| |||||||||| || |||||||||||| || ||||||||||| ||||||||||  |||||||  |    
T  19748332 cattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggca 19748431  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||| ||| |||||| |||| |||||||||||||||||||||||||||||| || ||||||||| || ||||||| ||||||||||||||||||          
T  19748432 aaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatca-tttataaaatatatttagtattatta-ttttc 19748529  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| |||||    
T  19748530 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacg 19748629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 375 - 678
Target Start/End: Original strand, 17103198 - 17103492
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||||       || ||||||||||||||| |||||||||||||||||||||    
T  17103198 aatcattgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatag 17103290  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
    | ||||||||| |||||| ||| |||||||||||||||||||||||||||| || || ||||||||| || ||||| ||||||||||| ||||| |        
T  17103291 acaaaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgactatatatca-tttatgacatatatttattattaat-ttt 17103388  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 674  Q
        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||| | ||||||||||| ||    
T  17103389 tttaggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgatttt 17103488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 379 - 605
Target Start/End: Original strand, 17250057 - 17250280
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||| ||||||| ||| ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||  ||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||||| || ||||            
T  17250157 aattcattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatata--aatttataatatatatttattactatt-gtttttt 17250253  T
Q  579 ggtaaaatccattgattttgattgcga 605  Q
    |||||||||||||||||||||||||||    
T  17250254 ggtaaaatccattgattttgattgcga 17250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 425 - 568
Target Start/End: Original strand, 21354786 - 21354928
Alignment:
Q  425 gactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaag 524  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21354786 gactttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaaaatccatcgttttttattgcgattttacgatttcttataaactaag 21354885  T
Q  525 tcatctatgactatataccattttataacatatatttagtatta 568  Q
    | || ||||||||||||||| |||||||||||||||||||||||    
T  21354886 taatttatgactatatacca-tttataacatatatttagtatta 21354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 378 - 644
Target Start/End: Complemental strand, 10509153 - 10508883
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    |||| |||||||||||| ||| ||||||||||||||||| | |||| |||||||||||| ||||| |||||||||  ||||||||||||||||||||  |    
T  10509153 cattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggca 10509054  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatatacc-----attttataacatatatttagtattattan 572  Q
    |||| ||| |||||| ||| ||||||||||| || |||||||||||||||| ||| ||||||||||       ||||||||||||||||| ||||||||     
T  10509053 aaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacctaagtcatttataacatatatttattattattat 10508955  T
Q  573 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcga 644  Q
          | ||||||||||  |||||||||||||||| |  |||||||||||| |||||||| |||| |||||    
T  10508954 tattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagtagtcga 10508883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 378 - 678
Target Start/End: Complemental strand, 11327701 - 11327394
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| |||| |||||||| || | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattatt------ 570  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||| ||||| |||| ||||||  |||||||          
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtatacca-tttatcacatgtatttatttattatttatttt 11327503  T
Q  571 -annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcg 669  Q
             |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| |||||||||||||||||    
T  11327502 attttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcg 11327403  T
Q  670 atattacga 678  Q
    || ||||||    
T  11327402 attttacga 11327394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 401 - 545
Target Start/End: Complemental strand, 22498992 - 22498848
Alignment:
Q  401 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcga 500  Q
    |||||||||| | ||  |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||| |    
T  22498992 aaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatcgattttaattgcaa 22498893  T
Q  501 ttttacgatttcttataaactaagtcatctatgactatataccat 545  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  22498892 ttttacgatttcttataaacgaagtcatttatgactatataccat 22498848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 377 - 504
Target Start/End: Complemental strand, 6943591 - 6943464
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||     
T  6943591 tcattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagac 6943492  T
Q  477 aaaatccattgattttaattgcgatttt 504  Q
    ||||| ||| |||||| |||||||||||    
T  6943491 aaaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 378 - 517
Target Start/End: Complemental strand, 27233407 - 27233268
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||| | | ||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  27233407 cattgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 27233308  T
Q  478 aaatccattgattttaattgcgattttacgatttcttata 517  Q
    |||||||| |||||| |||||||||||| |||||||||||    
T  27233307 aaatccatcgattttgattgcgattttatgatttcttata 27233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 379 - 547
Target Start/End: Complemental strand, 7918510 - 7918342
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| || |||   ||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 547  Q
    |||| || |||||| |||| |||||| |||||| ||||||| |||||||| |||||||||||| |||||    
T  7918410 aatcaatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcattt 7918342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 382 - 538
Target Start/End: Complemental strand, 2912373 - 2912218
Alignment:
Q  382 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaat 481  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||| ||||||| || ||||||||| |||||| ||||||||||||  ||||||   |||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaat-catagtagaatcttaaaataagcaaaat 2912275  T
Q  482 ccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactat 538  Q
     ||| |||||| ||||| |||||||||||| |||||||| ||||||| |||||||||    
T  2912274 tcatcgattttgattgcaattttacgattttttataaacaaagtcatttatgactat 2912218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 378 - 471
Target Start/End: Complemental strand, 18491167 - 18491074
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||| ||||||||||| ||| ||||||||||||| ||| |||||||  |||| ||||||||||||||||||||||||||| ||||||||||||    
T  18491167 cattgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaa 18491074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 513 - 678
Target Start/End: Complemental strand, 7918343 - 7918182
Alignment:
Q  513 ttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatg 612  Q
    ||||||| |||||||| |||||||||||| ||||| |||||||| |||||||||||||        |||||||||||| ||||||||||||||||| |      
T  7918343 ttataaattaagtcatttatgactatatatcattt-ataacataaatttagtattatt---tttttggtaaaatccatcgattttgattgcgattttaca 7918248  T
Q  613 atttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||| |||||  |||||||| ||||  | ||||||||| |||||||||||||||| || ||||||    
T  7918247 atttcctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacga 7918182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 5422878 - 5422798
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 458  Q
    ||||||||||||||||| ||| ||||| |||||||||| |||||||| ||||| |||||||||||||||||||||| ||||    
T  5422878 cattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 2912191 - 2912121
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||| ||||||||||||||||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaa 2912121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 579 - 682
Target Start/End: Complemental strand, 4841760 - 4841657
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||| ||| ||||||||||||||||| | ||||||||||  | |||||||| |||| || ||||||||||||| ||||||||||| ||| || |||    
T  4841760 ggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatttttcga 4841661  T
Q  679 tttc 682  Q
    ||||    
T  4841660 tttc 4841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 400 - 474
Target Start/End: Complemental strand, 4842025 - 4841953
Alignment:
Q  400 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||    
T  4842025 taaatcctaaaatt--ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataatag 4841953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 579 - 678
Target Start/End: Complemental strand, 22498371 - 22498272
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||| ||| |||||||||||||| ||||||    
T  22498371 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacga 22498272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 680
Target Start/End: Complemental strand, 2912191 - 2912091
Alignment:
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgat 679  Q
    ||||||||| | ||||||||||||||||| |  |||||||||| |||||||||| |||| || |||||||||||||| |||| ||||  ||| |||||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacgat 2912092  T
Q  680 t 680  Q
    |    
T  2912091 t 2912091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 678
Target Start/End: Complemental strand, 3573831 - 3573732
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||  ||| ||||||||||||||||| |  |||||||||||| ||||||||  ||| || ||||||| |||| |||||||||||||||| ||||||    
T  3573831 ggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacgattttgattgcgattttacga 3573732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccat 456  Q
    |||| ||||||| | ||| ||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 4841759 - 4841689
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | ||||||||||||||||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  4841759 gtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaa 4841689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 655 - 714
Target Start/End: Complemental strand, 3573820 - 3573761
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaa 714  Q
    ||||||||||||||||| |||| |||||||||||| |||||| || ||||||||||||||    
T  3573820 tcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaa 3573761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 10958317 - 10958239
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccat 456  Q
    ||||||||||||||||  ||| ||||||  ||||||||||||||||||||||   |||||||||| || ||||||||||    
T  10958317 cattgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgacttgactcaccttcaaggattcaaatccat 10958239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 17103394 - 17103464
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  17103394 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 17103464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 19748532 - 19748602
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  19748532 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 19748602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 22498370 - 22498300
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  22498370 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaa 22498300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 23898010 - 23898079
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||||| ||||||  |||||||||||||||||    
T  23898010 gtaaaatccatcgattttgattgagattttacaatttcttatatcgattcta-caaagtagttgagtaaaa 23898079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 483
Target Start/End: Original strand, 12245108 - 12245213
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||| |||||| |||  |||||| |||||||||| ||||||||||||| ||||| ||||  || | |||||||| | | |||||||||| ||| |    
T  12245108 cattgttgttaaaatcatgatttaaatcttaaaattcagtattttgcgactttattcactttcatggatttaaatccattgcaaaatcccaaaacagata 12245207  T
Q  478 aaatcc 483  Q
    ||||||    
T  12245208 aaatcc 12245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 406 - 471
Target Start/End: Complemental strand, 18491063 - 18490998
Alignment:
Q  406 ctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  18491063 ctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 27890137 - 27890225
Alignment:
Q  382 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    |||||||||||| |||| ||| ||| |||||||||| |||||||||||| |  | ||| |||||||||||||||||  ||||||||||||    
T  27890137 gttgtcaaaatc-tgacttaagtcccaaaattcaggtttttgcgactttgtgtagctttaacgactcaaatccatatcagaatcccaaaa 27890225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 706
Target Start/End: Complemental strand, 10508946 - 10508886
Alignment:
Q  646 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagt 706  Q
    |||||||| || |||||||||||||| |||| |||||||||||| |||||| |||||||||    
T  10508946 taaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagtagt 10508886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 715
Target Start/End: Complemental strand, 30912337 - 30912266
Alignment:
Q  644 agtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||| |||||| ||||||||||  || ||||||||||||| ||| || |||||||||||| |||||    
T  30912337 agtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaa 30912266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 7918280 - 7918210
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||  |||||| ||||||  ||||||||||    
T  7918280 gtaaaatccatcgattttgattgcgattttacaatttcctatattgattctacaaaagtccttgagtaaaa 7918210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 17543660 - 17543590
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| |||||  ||||| |||||| ||||||  ||||||||||    
T  17543660 gtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaa 17543590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 26053226 - 26053156
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| |||||  ||||| |||||| ||||||  ||||||||||    
T  26053226 gtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaa 26053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 26073279 - 26073209
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| |||||  ||||| |||||| ||||||  ||||||||||    
T  26073279 gtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaa 26073209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 471
Target Start/End: Complemental strand, 18490987 - 18490922
Alignment:
Q  406 ctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||| ||| ||||||| ||||| |||||||||||||||| ||| |||||| | ||||||||||    
T  18490987 ctaaaatccagcattttgcaactttattcaccttcaacgactgaaacccatagcataatcccaaaa 18490922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 623
Target Start/End: Complemental strand, 27233308 - 27233267
Alignment:
Q  582 aaaatccattgattttgattgcgatttgatgatttcttatat 623  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  27233308 aaaatccatcgattttgattgcgattttatgatttcttatat 27233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 33583855 - 33583766
Alignment:
Q  382 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||||||||  ||| ||| ||| ||||| |||||||||  ||||||  | | |||||||||||||||||||||| |||| |||||||    
T  33583855 gttgtcaaaatcgcgacttaagtcccaaaatccaggatttttagactttaattagcttcaacgactcaaatccatagcagaaacccaaaa 33583766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Original strand, 7223610 - 7223650
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  7223610 aaaatccatcgattttgattgcgattttacgatttcttata 7223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 8285827 - 8285760
Alignment:
Q  404 tcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||||| ||||||||||||||||  |  | ||||||||||||||||||| || | ||||||||||    
T  8285827 tcctaaaatccaggattttgcgacttgatctagcttcaacgactcaaatccacagcaaaatcccaaaa 8285760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 23897910 - 23897949
Alignment:
Q  648 aaatccttcgattttgattgcgatattacgatttcttata 687  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  23897910 aaatccatcgattttgattgcgattttacgatttcttata 23897949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 557
Target Start/End: Complemental strand, 27614651 - 27614594
Alignment:
Q  501 ttttacgatttcttataaac--taagtcatctatgactatataccattttataacatat 557  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||||| ||||||||||||    
T  27614651 ttttacgatttcttataaactataattcatttatgactatatacca-tttataacatat 27614594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 7359871 - 7359916
Alignment:
Q  402 aatcctaaaattcaggattttgcgactttcttcaccttcaacgact 447  Q
    |||||||||||| | ||||| |||||||| ||||||||||||||||    
T  7359871 aatcctaaaatttaagatttagcgactttattcaccttcaacgact 7359916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 8545087 - 8545030
Alignment:
Q  386 tcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaac 443  Q
    ||||||||| ||  |||||||||||||| ||||||||||||||||  |||| ||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgactttactcactttcaac 8545030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 688
Target Start/End: Complemental strand, 27233308 - 27233267
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttatat 688  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||    
T  27233308 aaaatccatcgattttgattgcgattttatgatttcttatat 27233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 4e-77; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 375 - 678
Target Start/End: Complemental strand, 31238110 - 31237808
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  31238110 aatcattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaatag 31238011  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattattann 573  Q
     |||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | |||||||||      
T  31238010 gaaaaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatgtattatta-t 31237913  T
Q  574 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatat 673  Q
         |||||||||||| |||||||||||| |||| |  ||||  |||||| ||| |||| ||||  | ||||||||||||||||| ||||||||||| |    
T  31237912 tttttggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattt 31237813  T
Q  674 tacga 678  Q
    |||||    
T  31237812 tacga 31237808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 380 - 676
Target Start/End: Complemental strand, 35566082 - 35565788
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    |||||||||||||||  || ||||||  ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||  |||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 579  Q
    |||||| |||||| |||||  |||||||||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||| ||        |    
T  35565982 atccatcgattttgattgcagttttacgatttcttataaacaaagtcatttatgactatata-caatttataacatatatttagtattttt----ttttg 35565888  T
Q  580 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag---taaaatccttcgattttgattgcgatattac 676  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| |||| || |||   |||||||||||||||||  ||||||| ||||    
T  35565887 gtaaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttac 35565788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 378 - 680
Target Start/End: Complemental strand, 15588979 - 15588685
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||| ||||||||||| ||| ||| || ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| |    
T  15588979 cattgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagaca 15588881  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    ||||| || | |||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||   || ||||||||||||||||||           
T  15588880 aaatcaatcgttttttattgcgattttacgatttcatataaactaagtcatttatgattatataccatt---tatcatatatttagtattatt---tttt 15588787  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 677  Q
     |||||||||||| ||||||||||||||||| || |||||||||||| || |||| |||||  | ||||||||||||||||||||| ||||||| ||| |    
T  15588786 tggtaaaatccatcgattttgattgcgattttataatttcttatatcgatcctac-gaagtaattgagtaaaatccttcgattttggttgcgattttatg 15588688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 375 - 671
Target Start/End: Original strand, 1404779 - 1405073
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| ||     
T  1404779 aatcattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactat 1404878  T
Q  475 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 574  Q
      ||||||||| |||||| |||| ||||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||| |||| | |||||       
T  1404879 gcaaaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacacca-tttataacatatacttaggaatattatta 1404977  T
Q  575 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
          | |||||||| |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  1404978 tttt-tttaaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 1405073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 377 - 678
Target Start/End: Original strand, 36429846 - 36430145
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    ||||||||||||||||||  || ||||||||| |||  |||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||      
T  36429846 tcattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggc 36429945  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 576  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||| || |||||||||||| || ||| |||||||||||||||||| ||          
T  36429946 aaaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatca-tttctaacatatatttagtatt-tttttttt 36430043  T
Q  577 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
      |||||||||||| |||||||||||| |||| |   ||| || |||| |||||||| || |  | |||||| |||||||||||||||||||||| ||||    
T  36430044 taggtaaaatccatcgattttgattgcaattttaattttttttttatcgattctacaaaaattattgagtaatatccttcgattttgattgcgattttac 36430143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 377 - 547
Target Start/End: Original strand, 30432417 - 30432587
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||||||  ||||| |||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||     
T  30432417 tcattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagac 30432516  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 547  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  30432517 aaaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccattt 30432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 378 - 678
Target Start/End: Original strand, 20063713 - 20064020
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| |||| |||||||| || | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattatt------ 570  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||| ||||| |||| ||||||  |||||||          
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtatacca-tttatcacatgtatttatttattatttatttt 20063911  T
Q  571 -annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcg 669  Q
             |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| |||||||||||||||||    
T  20063912 attttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcg 20064011  T
Q  670 atattacga 678  Q
    || ||||||    
T  20064012 attttacga 20064020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 381 - 570
Target Start/End: Original strand, 31578007 - 31578194
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 480  Q
    |||||||||||||| ||| |||||  ||||||| | |||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||   ||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  481 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 570  Q
    |||||  ||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  31578106 tccatcaattttgattgcaattttacgatttattataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt 31578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 462 - 671
Target Start/End: Complemental strand, 1690774 - 1690567
Alignment:
Q  462 aatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattt 561  Q
    |||||||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| ||||||||    
T  1690774 aatcccaaaataggcgaaacccattgattttgattgcgattttacgatttcttataaactaagtcttttatgactatatacca-tttataaaatatattt 1690676  T
Q  562 agtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 661  Q
    | ||||||||       ||||||||  || ||||||||||||||||| | || |||||||||| |||  ||| |||| ||  |||||| ||||||| |||    
T  1690675 aatattatta-ttttttggtaaaatttatcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagttcagtaaattccttcgcttt 1690577  T
Q  662 tgattgcgat 671  Q
    || |||||||    
T  1690576 tggttgcgat 1690567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 378 - 508
Target Start/End: Complemental strand, 23863451 - 23863321
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| ||||| |||||||  || ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||  |    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  478 aaatccattgattttaattgcgattttacga 508  Q
    |||||||| ||||||  ||||||||||||||    
T  23863351 aaatccatcgattttggttgcgattttacga 23863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 381 - 512
Target Start/End: Complemental strand, 25539353 - 25539222
Alignment:
Q  381 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 480  Q
    |||||| ||||||| ||  |||||||||||||||| || ||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||   ||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  481 tccattgattttaattgcgattttacgatttc 512  Q
    ||||| |||||| | |||||||| ||||||||    
T  25539253 tccatcgattttgactgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 379 - 505
Target Start/End: Original strand, 19491855 - 19491982
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatccta--aaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||  ||  |||||||||  ||||  ||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||      
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggt 19491953  T
Q  477 aaaatccattgattttaattgcgatttta 505  Q
    ||||||||| |||||| ||||||||||||    
T  19491954 aaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 474
Target Start/End: Complemental strand, 1690892 - 1690796
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    ||||||||||||||  | ||| |||||| ||||||| ||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  1690892 cattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatag 1690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 681
Target Start/End: Original strand, 16766922 - 16767085
Alignment:
Q  516 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 615  Q
    |||||| |||||| ||||||| ||||| |||| |||||| |||||||| ||||||        |||||| ||| ||||||||||||||||||| | ||||    
T  16766922 taaactgagtcatttatgactgtatacaattt-ataacaaatatttagcattatttttgttttggtaaa-tcctttgattttgattgcgattttacgatt 16767019  T
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||| |||||| | |||| || |||||||||||||| |||||||||||||| ||| |||||    
T  16767020 tcttatatcgattctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgattt 16767085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 681
Target Start/End: Original strand, 27406927 - 27407091
Alignment:
Q  516 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 615  Q
    |||||| |||||| ||| ||||||||| | ||||||| |||||||||| ||||||        ||| ||||||||  |||||||||||||||| ||||||    
T  27406927 taaactgagtcatttattactatatac-agtttataatatatatttagcattatttttgttttggtgaaatccatcaattttgattgcgattttatgatt 27407025  T
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||  ||| | || |||| || ||||||||| ||| |||||||||||||||||||||||||    
T  27407026 tcttatattgattatccaaaagtagttgagtaaaattcttggattttgattgcgatattacgattt 27407091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 16766987 - 16767054
Alignment:
Q  648 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  16766987 aaatcctttgattttgattgcgattttacgatttcttatatcgattctataaaagtagttgagtaaaa 16767054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 378 - 474
Target Start/End: Complemental strand, 5395778 - 5395682
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||  ||||||||||| ||||||  |||||||||||||||| |||| ||| || ||||||||||||||| |||||| ||||||||    
T  5395778 cattgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaatag 5395682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 376 - 484
Target Start/End: Original strand, 15266079 - 15266187
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||  ||||| |||| |||||| || ||||||||||  || ||| |||||||||     
T  15266079 atcattgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaatagg 15266178  T
Q  476 aaaaatcca 484  Q
    |||||||||    
T  15266179 aaaaatcca 15266187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 546 - 681
Target Start/End: Complemental strand, 13502637 - 13502502
Alignment:
Q  546 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 645  Q
    ||||||||||||||||| |||||||        |||||||||||| ||||||||||||||||| | ||||||||||||  |||||||| || | || ||     
T  13502637 tttataacatatatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttgac 13502538  T
Q  646 taaaatccttcgattttgattgcgatattacgattt 681  Q
    ||| ||||||| ||||||||| |||| |||||||||    
T  13502537 taatatccttcaattttgattacgattttacgattt 13502502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 379 - 473
Target Start/End: Original strand, 16766710 - 16766804
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    ||||||||||||||  |||| |||||| ||||||| |||||||| ||| ||| |||||||||||||| |||||||||||| ||||||| ||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 546 - 678
Target Start/End: Complemental strand, 19262279 - 19262148
Alignment:
Q  546 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 645  Q
    ||||||||||||| ||||||||||||       |||||| ||| | ||||||||||||||||| |  |||||||||||| |||||||| ||||  | |||    
T  19262279 tttataacatatagttagtattattatttttt-ggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgag 19262181  T
Q  646 taaaatccttcgattttgattgcgatattacga 678  Q
    ||||||| |||||||||||||||||| ||||||    
T  19262180 taaaatctttcgattttgattgcgattttacga 19262148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 678
Target Start/End: Complemental strand, 25539138 - 25538977
Alignment:
Q  516 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 615  Q
    |||||| |||||| ||||||||||||| || | ||||||||||||||| ||||||        ||||||||| || |||||||||||| |||| |  |||    
T  25539138 taaactgagtcatttatgactatatacaatat-ataacatatatttagcattatttctgttttggtaaaatctatcgattttgattgcaattttacaatt 25539040  T
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    | ||||||| |||||||| |||| ||  ||||||||||||  |||||||||||||| ||||||    
T  25539039 ttttatatcgattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacga 25538977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 407 - 471
Target Start/End: Original strand, 34841584 - 34841648
Alignment:
Q  407 taaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  34841584 taaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaa 34841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 645 - 713
Target Start/End: Complemental strand, 35565887 - 35565819
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaa 713  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||||    
T  35565887 gtaaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaa 35565819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 474
Target Start/End: Original strand, 31023259 - 31023318
Alignment:
Q  415 aggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||    
T  31023259 aggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaatag 31023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 645 - 709
Target Start/End: Complemental strand, 13502603 - 13502539
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttga 709  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||  |||||| |||| |||||||    
T  13502603 gtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttga 13502539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 579 - 671
Target Start/End: Original strand, 30433013 - 30433105
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    ||||||||||||  |||||||||||||||| |  ||||| |||||| |||||| | ||||  | |||||||||| ||||||||||||||||||    
T  30433013 ggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaatcattcgattttgattgcgat 30433105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 474
Target Start/End: Original strand, 17995051 - 17995150
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 474  Q
    |||||||||||| ||||| | ||| |||| |||||||| ||| ||||||||| ||| |||||| |||||||||||||| | ||| | ||| |||||||||    
T  17995051 aatcattgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaatag 17995150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 458
Target Start/End: Original strand, 19245149 - 19245232
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 458  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||| |||||||  ||| ||| | ||| ||||||||||||    
T  19245149 aatcattgttgtcaaaatcccgacttaaattttaaaattcaggattttacgactttactcatctttagcgattcaaatccatag 19245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 19262246 - 19262176
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| ||||||  ||||||||||    
T  19262246 gtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaa 19262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 30433014 - 30433084
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||||||| |||| ||||| |||||| |||||||||||||  ||||||||||    
T  30433014 gtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaa 30433084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 974576 - 974635
Alignment:
Q  619 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  974576 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 974635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 681
Target Start/End: Original strand, 19245827 - 19245889
Alignment:
Q  619 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    |||||| |||||||| |||| ||  |||||||||||| ||||||||||||||| |||||||||    
T  19245827 tatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgattt 19245889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 378 - 464
Target Start/End: Original strand, 24473335 - 24473420
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaat 464  Q
    |||||||||| ||||| |||| ||| ||| ||||||||||||||||||| |||  ||||||||||| | |||||||| ||| |||||    
T  24473335 cattgttgtcgaaatcgtgacttaagtcccaaaattcaggattttgcgattttactcaccttcaac-attcaaatccgtagcagaat 24473420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 25539075 - 25539005
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||  |||||||||||||| || |||| |||| ||||||| |||||| |||||||||| |||||||    
T  25539075 gtaaaatctatcgattttgattgcaattttacaattttttatatcgattctacaaaagtagttcagtaaaa 25539005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 714
Target Start/End: Complemental strand, 5395452 - 5395384
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaa 714  Q
    |||||||| ||||||||||||||  || ||| ||||||||||||| |||||| ||||||| |||||||||    
T  5395452 gtaaaatctttcgattttgattgtaattttaagatttcttatatcgattcta-aaaagtaattgagtaaa 5395384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 517
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  477 aaaatccattgattttaattgcgattttacgatttcttata 517  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 678
Target Start/End: Complemental strand, 27523980 - 27523928
Alignment:
Q  626 attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  27523980 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 27523928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 27750282 - 27750194
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc 466  Q
    ||||||||||||||||  ||| ||| ||| ||||| || ||||||||||||||  | | ||| |||||||||||||||||  |||||||    
T  27750282 cattgttgtcaaaatcgcgacttaagtcccaaaatacaagattttgcgacttttcttaacttaaacgactcaaatccataacagaatcc 27750194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Complemental strand, 31238008 - 31237968
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  31238008 aaaatccatcgattttgattgcgattttacgatttcttata 31237968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 1404985 - 1405052
Alignment:
Q  648 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||| |||||||||||||| || |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  1404985 aaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaa 1405052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 655 - 714
Target Start/End: Complemental strand, 1690648 - 1690589
Alignment:
Q  655 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaa 714  Q
    ||||||||||||||||| |||||| |||||||||| |||  | |||||||||| ||||||    
T  1690648 tcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagttcagtaaa 1690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 16766987 - 16767026
Alignment:
Q  478 aaatccattgattttaattgcgattttacgatttcttata 517  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  16766987 aaatcctttgattttgattgcgattttacgatttcttata 16767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 27406993 - 27407060
Alignment:
Q  648 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||| || |||||||||||||| ||| ||||||||||||  ||| |  ||||||||||||||||||    
T  27406993 aaatccatcaattttgattgcgattttatgatttcttatattgattatccaaaagtagttgagtaaaa 27407060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 688
Target Start/End: Original strand, 1404881 - 1404922
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttatat 688  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||    
T  1404881 aaaatccatcgattttgattgtgattttacgatttcttatat 1404922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 15516667 - 15516610
Alignment:
Q  400 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccata 457  Q
    |||||| ||| |||||| ||||||||||||| |||||||||||| | |||||| ||||    
T  15516667 taaatcttaatattcagcattttgcgactttattcaccttcaacaattcaaattcata 15516610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 2e-75; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 377 - 678
Target Start/End: Original strand, 28745768 - 28746073
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||     
T  28745768 tcattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagac 28745867  T
Q  477 aaaatccattgattttaattgcgattttacgatttc------ttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 570  Q
    ||||| ||| |||||| |||||||||||||||||||      |||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||| |    
T  28745868 aaaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatacta-tttataacatatatttactattaat 28745966  T
Q  571 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcga 670  Q
            |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||||||    
T  28745967 -ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcga 28746065  T
Q  671 tattacga 678  Q
    | ||||||    
T  28746066 ttttacga 28746073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 378 - 545
Target Start/End: Original strand, 29067283 - 29067450
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29067283 cattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaca 29067382  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccat 545  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29067383 aaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatataccat 29067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 378 - 680
Target Start/End: Complemental strand, 8156261 - 8155959
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa-tagaa 476  Q
    |||||||||||||||||  || ||||| ||||||||||| ||||| ||| ||| ||||||||||| ||||||||||||||||| |||||||||| ||||     
T  8156261 cattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattagac 8156162  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta-nnnn 575  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||         
T  8156161 aaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatatacca-tttataacatatatttagtattattattatt 8156063  T
Q  576 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatta 675  Q
       |||||||||||  ||| ||||||||||||| |   |||||||||||||| ||||| |||| || ||||||||||||||||| ||  ||||||| |||    
T  8156062 tttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgatcttagttgcgatttta 8155964  T
Q  676 cgatt 680  Q
     ||||    
T  8155963 tgatt 8155959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 377 - 661
Target Start/End: Original strand, 39427900 - 39428183
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    |||| ||||||||||||| ||  |||||  |||||| | ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||     
T  39427900 tcatcgttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagac 39427999  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 576  Q
    ||| ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||| |          
T  39428000 aaagtccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacta-cttataacatatatttagtattaattttttt 39428098  T
Q  577 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 661  Q
      |||||||||||| ||||||||||||||||| |  ||||| |||||| |||| ||| || |  | |||||||||||||||||||    
T  39428099 tgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaatccttcgattt 39428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 377 - 676
Target Start/End: Complemental strand, 24620334 - 24620031
Alignment:
Q  377 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgac---tttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    |||||||||||||||| | ||| |||||||||||||| | |||||||||||   ||||||||||||||||||||||||| || ||||||||| |||||||    
T  24620334 tcattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaata 24620235  T
Q  474 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta-- 571  Q
    |  ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||| |||      
T  24620234 ggcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatatacca-tttataaaatatatttagtatttttatt 24620136  T
Q  572 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
           |||||||||||   |||||||||||||||| |  ||||  |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  24620135 tttttttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgat 24620036  T
Q  672 attac 676  Q
     ||||    
T  24620035 tttac 24620031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 379 - 676
Target Start/End: Original strand, 22137278 - 22137572
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||| | ||||||||||| |||||||||||||||| ||| || |||||||||||||||| |||| ||||||||||||||| ||||||||||||   ||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||||||| ||||||||||||| | |||||||| |||||||||||||||||           
T  22137378 aatccatcgattttaattgcgatttt-cgatttcttatttactaagtcatttatgactatatacta-tttataac-tatatttagtattattaatttttt 22137474  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
     |||||||||||  |||||||||  | ||| | ||||||||||||| |||||||| |||| || ||||||||| ||| ||||||| ||| ||| ||||    
T  22137475 tgtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttac 22137572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 384 - 680
Target Start/End: Original strand, 17064326 - 17064606
Alignment:
Q  384 tgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 483  Q
    ||||||||||| ||| |||||| |||||||||||||||||||| | | ||||||||||||||||| ||| ||||||||||| | |||||||| ||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  484 attgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaa 583  Q
    || |||||| ||||||||||||||||||||||||||||||||||| |||||||||               |||||||||||||| ||        |||||    
T  17064426 atcgatttttattgcgattttacgatttcttataaactaagtcatttatgactat---------------atatatttagtatt-ttttttttttggtaa 17064509  T
Q  584 aatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||| |||||||||||| |||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||||||| ||||||||    
T  17064510 aatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgatt 17064606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 452 - 676
Target Start/End: Original strand, 42696920 - 42697143
Alignment:
Q  452 tccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttata 551  Q
    |||||||||||||| ||||||||  ||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttata 42697018  T
Q  552 acatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaat 651  Q
    |||||||||| ||||| ||        |||||||||||| |||||||||||||| || ||||||||||||||| |||||||| |||| || || ||||||    
T  42697019 acatatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaat 42697118  T
Q  652 ccttcgattttgattgcgatattac 676  Q
    ||||| |||||  ||||||| ||||    
T  42697119 ccttcaattttagttgcgattttac 42697143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 379 - 678
Target Start/End: Original strand, 20756039 - 20756319
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||||||||||||| ||| |||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||  ||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  479 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 578  Q
    |||| || |||||| ||||| ||||||||||||||||||||||||||||                  |||||||||||||||||||||||||            
T  20756139 aatcaatcgattttgattgcaattttacgatttcttataaactaagtca------------------tttataacatatatttagtattatt-tcttttg 20756219  T
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| || |  | |||||||||| ||| |||||||||||||| ||||||    
T  20756220 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgagtaaaatctttcaattttgattgcgattttacga 20756319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 380 - 528
Target Start/End: Complemental strand, 3449419 - 3449272
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 479  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||| |||||||  |||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  480 atccattgattttaattgcgattttacgatttcttataaactaagtcat 528  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  3449320 atccatagatttttattgcgattttacgatttcttataaagtaagtcat 3449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 388 - 571
Target Start/End: Original strand, 21963438 - 21963620
Alignment:
Q  388 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 487  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  488 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 571  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21963538 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21963620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 388 - 571
Target Start/End: Original strand, 21985874 - 21986056
Alignment:
Q  388 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 487  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  488 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 571  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21985974 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21986056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 379 - 505
Target Start/End: Complemental strand, 30727820 - 30727694
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 478  Q
    |||||| ||||||||||||| |||||| |||||| | | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  479 aatccattgattttaattgcgatttta 505  Q
    ||| ||| |||||| ||||||||||||    
T  30727720 aattcatcgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 22494889 - 22494731
Alignment:
Q  400 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 499  Q
    |||||||||||||    |||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||| | ||||| ||| |||||| ||||||    
T  22494889 taaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgattgcg 22494790  T
Q  500 attttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtat 566  Q
    ||||||||       |||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  22494789 attttacg-------ataaactaagtcagttatgactatatacca-tttataacatatatttagtat 22494731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 378 - 483
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||  |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  478 aaatcc 483  Q
    ||||||    
T  27676455 aaatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 15515296 - 15515195
Alignment:
Q  468 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 567  Q
    ||||||| |||||| | | |||||||| | |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15515296 aaaataggaaaaattcgtcgattttaacttcgatttcacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 15515198  T
Q  568 att 570  Q
    |||    
T  15515197 att 15515195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 376 - 525
Target Start/End: Complemental strand, 25870508 - 25870350
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttc----aacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||||||||||||||  ||| ||||||||||||| || ||||||| ||||||||||| ||||    |||||||||||| | |||||||| | |||||    
T  25870508 atcattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaa 25870409  T
Q  472 tagaaaaaatcca-----ttgattttaattgcgattttacgatttcttataaactaagt 525  Q
    |||  ||||||||     |||||||| |||||||||||||||||||||||||| |||||    
T  25870408 taggcaaaatccatcgatttgattttgattgcgattttacgatttcttataaattaagt 25870350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 378 - 528
Target Start/End: Complemental strand, 22356183 - 22356032
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaatagaa 476  Q
    ||||||| ||||||| | ||| |||||||||||||||||||||||  || ||| || || ||||||| | |  ||| ||||||||||||| ||||||       
T  22356183 cattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataagc 22356084  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 528  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  22356083 aaaatccatgaattttgattgcgattttacgatttcttataaactaagtcat 22356032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 379 - 473
Target Start/End: Complemental strand, 24649818 - 24649724
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    |||||||||||||||| ||| |||||| ||||||  ||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaata 24649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 579 - 681
Target Start/End: Original strand, 27676634 - 27676736
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||| |||| |||| || |||||||||| |||||||||||||||||| ||| ||    
T  27676634 ggtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgattttgattgcgattttaaga 27676733  T
Q  679 ttt 681  Q
    |||    
T  27676734 ttt 27676736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 378 - 471
Target Start/End: Complemental strand, 15806635 - 15806543
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||||||||||||| ||| ||||||||| ||| ||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  15806635 cattgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaa 15806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 536 - 680
Target Start/End: Complemental strand, 25870294 - 25870152
Alignment:
Q  536 tatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacaga 635  Q
    |||||||||||| ||||||||||||||||||||||        |||||||||||| ||||||||||||||||| |  |||||||||||| |||||||| |    
T  25870294 tatataccattt-ataacatatatttagtattatt-gttttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaa 25870197  T
Q  636 agtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
      | || ||||||||||||| ||||||| ||||||| ||||||||    
T  25870196 cttagttgagtaaaatcctttgattttggttgcgattttacgatt 25870152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 579 - 681
Target Start/End: Complemental strand, 6136500 - 6136398
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||||||||| ||||| | ||||||||||||| |||||| | |||| || |||||||||| || ||||||||||||||| ||||||    
T  6136500 ggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaatcttttgattttgattgcgattttacga 6136401  T
Q  679 ttt 681  Q
    |||    
T  6136400 ttt 6136398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 6136499 - 6136429
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||    
T  6136499 gtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaa 6136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 579 - 678
Target Start/End: Original strand, 13286142 - 13286241
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| |||||| |||| ||||| | ||||||||||||| |||||||| |||| || |||||||||| || ||||||||||||||| ||||||    
T  13286142 ggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaatcttttgattttgattgcgattttacga 13286241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 579 - 680
Target Start/End: Original strand, 28135960 - 28136061
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||  ||||||||||||| | |||| |  |||||||||||||||| |||| |||| || ||||||||||||||||||||||| ||||| ||||||    
T  28135960 ggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcgattttgatagcgattttacga 28136059  T
Q  679 tt 680  Q
    ||    
T  28136060 tt 28136061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 17796374 - 17796473
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    ||||||||||||||||| | ||| |||||| ||||||  |||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  17796374 atcattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 17796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 19104814 - 19104913
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    ||||||||||||||||| | ||| |||||| ||||||  |||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  19104814 atcattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 19104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 483
Target Start/End: Complemental strand, 10873053 - 10872971
Alignment:
Q  401 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 483  Q
    |||||||||||| |||||||||| ||  || ||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  10873053 aaatcctaaaatccaggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 13286143 - 13286213
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  13286143 gtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaa 13286213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 579 - 680
Target Start/End: Complemental strand, 3449241 - 3449140
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||  |||||||||||||||| |   ||||||||||| |||||||| |||| || || ||||||| |||||||||| ||||||| ||||||    
T  3449241 ggtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcattcgattttggttgcgattttacga 3449142  T
Q  679 tt 680  Q
    ||    
T  3449141 tt 3449140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 17064506 - 17064576
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||||||||||||| || |||| |||||||||||  |||||| ||||||||||||||||||    
T  17064506 gtaaaatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaa 17064576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 25870252 - 25870182
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||| |||||| |||  |||||||||||||    
T  25870252 gtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaacttagttgagtaaaa 25870182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 27676635 - 27676705
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| | ||||||||||| ||| ||||||||||||||||| ||| || ||||||||||||||||||    
T  27676635 gtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaa 27676705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 28135723 - 28135801
Alignment:
Q  380 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 458  Q
    ||||||||||||| | ||  |||||| |||||||||||||||||||||||| ||||| ||||  |||||||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatag 28135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 42697047 - 42697117
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||  ||| ||||||||||||| |||||| |||||||||||| |||||    
T  42697047 gtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaa 42697117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 17796265 - 17796364
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||||| |||||||||| |  || |||||| ||||||  ||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796265 atcattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 17796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 17796483 - 17796582
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||||||||||||||||   ||  |||||| ||||||  |||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796483 atcattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 17796582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 19104705 - 19104804
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||||| |||||||||| |  || |||||| ||||||  ||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104705 atcattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 19104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 19104923 - 19105022
Alignment:
Q  376 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 475  Q
    |||||||||||||||||   ||  |||||| ||||||  |||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104923 atcattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 19105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 3449240 - 3449170
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||||||| ||||  ||||||||||| |||||| |||||||||||| |||||    
T  3449240 gtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaa 3449170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 681
Target Start/End: Complemental strand, 10872646 - 10872544
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||  ||||| |||  ||||| | ||||||||||||| ||||| || |||| ||  ||||||||||||| |||||||||||||| ||| ||    
T  10872646 ggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttatga 10872547  T
Q  679 ttt 681  Q
    |||    
T  10872546 ttt 10872544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 21963630 - 21963700
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||  | | ||||||||||||||||| |||||||||||||| ||||||||||    
T  21963630 gtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaaa 21963700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 21986066 - 21986136
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||  | | ||||||||||||||||| |||||||||||||| ||||||||||    
T  21986066 gtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaaa 21986136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 22137476 - 22137546
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || |||||||||  | | ||||||||||||||||| |||||| ||||||||||||||||||    
T  22137476 gtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagttgagtaaaa 22137546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 28745975 - 28746045
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  28745975 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaa 28746045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 678
Target Start/End: Original strand, 22971050 - 22971106
Alignment:
Q  622 atcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  22971050 atcaattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 22971106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 656 - 715
Target Start/End: Complemental strand, 8156048 - 8155989
Alignment:
Q  656 cgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||| ||||||||||| ||||  |||||||||||||| ||| ||||||||||||||||||    
T  8156048 cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaa 8155989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 8592290 - 8592231
Alignment:
Q  619 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 678  Q
    |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  8592290 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 8592231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 20756221 - 20756291
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| |||| |  ||||||||||    
T  20756221 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgagtaaaa 20756291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 715
Target Start/End: Original strand, 28135973 - 28136031
Alignment:
Q  657 gattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||||||||| | || |||| |||||||||||||||| || ||||||||||||||||||    
T  28135973 gattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaa 28136031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 661
Target Start/End: Original strand, 29067475 - 29067557
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 661  Q
    |||||||||||| ||||||||||||||||| |  | |||  |||||||||||||| || |  | |||||||||||||||||||    
T  29067475 ggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcgattt 29067557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Complemental strand, 8156161 - 8156121
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttata 687  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  8156161 aaaatccatcgattttgattgcgattttacgatttcttata 8156121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 379 - 471
Target Start/End: Original strand, 13005927 - 13006019
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    |||||||||||||||  ||| |||||   ||||||||  ||||||||||||| |||||||| |||   |||||||||||| | ||||||||||    
T  13005927 attgttgtcaaaatctcgacttaaatttcaaaattcataattttgcgactttattcacctttaacatttcaaatccatagcaaaatcccaaaa 13006019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 517
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  477 aaaatccattgattttaattgcgattttacgatttcttata 517  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 42696870 - 42696914
Alignment:
Q  383 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgac 427  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttgcgac 42696914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 678
Target Start/End: Original strand, 3041485 - 3041520
Alignment:
Q  643 gagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3041485 gagtaaaatccttcgattttgattgcgattttacga 3041520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 678
Target Start/End: Original strand, 18014253 - 18014288
Alignment:
Q  643 gagtaaaatccttcgattttgattgcgatattacga 678  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18014253 gagtaaaatccttcgattttgattgcgattttacga 18014288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 10872645 - 10872575
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| || ||||| |||  ||| ||||||||||||||||| |||||  |||||||||| |||||||    
T  10872645 gtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaa 10872575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 17796779 - 17796834
Alignment:
Q  658 attttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  17796779 attttgatttcgattttacgatttcttat--cgattctacaaaagtagttgagtaaaa 17796834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 19105219 - 19105274
Alignment:
Q  658 attttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| |||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  19105219 attttgatttcgattttacgatttcttat--cgattctacaaaagtagttgagtaaaa 19105274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 643 - 681
Target Start/End: Original strand, 27090704 - 27090742
Alignment:
Q  643 gagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  27090704 gagtaaaatccttcgatttttattgcgatcttacgattt 27090742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 29067476 - 29067546
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| | |||  |||||||||||| |||| |  ||||||||||    
T  29067476 gtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaa 29067546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Original strand, 39428102 - 39428172
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||| | |||| |  ||||||||||    
T  39428102 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaa 39428172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 378 - 676
Target Start/End: Complemental strand, 7585 - 7289
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||| | ||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||| |||||||  |    
T  7585 cattgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggca 7486  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 577  Q
    |||| ||| |||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||  ||| ||||||||||||||||||||           
T  7485 aaattcatcgattttaattgcgattttacgatttcttataaacgaagtaatttatgaatatatacca-attagaacatatatttagtattatt-gttttt 7388  T
Q  578 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
     |||||||| ||| ||||||||||||||||  |  ||||| |||||| |||| ||| ||||  | |||||||||||||||||||||||| |||| ||||    
T  7387 tggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgattacgattttac 7289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 7385 - 7315
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| | |||||||||||||||||  ||| ||||| |||||| |||| | ||||||| ||||||||||    
T  7385 gtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaa 7315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 113; Significance: 8e-57; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 378 - 681
Target Start/End: Complemental strand, 93834 - 93534
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||||| ||| ||||||||||||| ||| ||||||  | |||||||||| ||||| |||||||||||||| ||||| | |||||||       
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  478 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgact-atataccattttataacatatatttagtattattannnnn 576  Q
    |||||||| |||||| ||||||||||||||||||||| |||| |||||| | ||||||| |||||| | || ||||||||||||||||| ||||          
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacga-ttcataacatatatttagtaatatt-tgttt 93639  T
Q  577 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 676  Q
      |||||||||||| ||||||||||||||||| | ||||| ||||||| |||||||| |||| || || ||||||||||||||||||||| |||| ||||    
T  93638 ttggtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttac 93539  T
Q  677 gattt 681  Q
     ||||    
T  93538 aattt 93534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 93635 - 93565
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||| |||||| |||||||||||| |||||    
T  93635 gtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaa 93565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 1e-30; HSPs: 3)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 378 - 517
Target Start/End: Complemental strand, 231 - 91
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata-gaa 476  Q
    ||||||||  || |||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||| |      
T  231 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 132  T
Q  477 aaaatccattgattttaattgcgattttacgatttcttata 517  Q
    ||||||||| |||||| |||| |||||||| ||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttata 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 582 - 680
Target Start/End: Complemental strand, 131 - 34
Alignment:
Q  582 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    ||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || ||||||||||||||||||||| || |||| ||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttggtttcgattttacgatt 34  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 715
Target Start/End: Complemental strand, 131 - 64
Alignment:
Q  647 aaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||| ||||||||||||| ||| |||| |||||||||||| ||||||  |||||||||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattcta-caaagtagttgagtaaaa 64  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 61; Significance: 8e-26; HSPs: 3)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 516 - 681
Target Start/End: Complemental strand, 8952 - 8788
Alignment:
Q  516 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 615  Q
    |||||| |||||| ||||||||||||| | || ||||||||||||||| |||||         |||||||||||| ||||||||||||||||| |  | |    
T  8952 taaactgagtcatttatgactatatacaactt-ataacatatatttagcattatctttgttttggtaaaatccatcgattttgattgcgattttacaagt 8854  T
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||| |||||||| |||| || |||||||||||||||||||||||| |||| ||| |||||    
T  8853 tcttatatctattctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattt 8788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 375 - 458
Target Start/End: Complemental strand, 9153 - 9070
Alignment:
Q  375 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 458  Q
    |||||||||||||||||||||||  |||||  ||||||  ||||||||| || ||| |||||||||||||||||||||||||||    
T  9153 aatcattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatag 9070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 8889 - 8819
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| | |||||||||| |||||| ||||||||||||||||||    
T  8889 gtaaaatccatcgattttgattgcgattttacaagttcttatatctattctacaaaagtagttgagtaaaa 8819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 5e-21; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 579 - 671
Target Start/End: Complemental strand, 56356 - 56264
Alignment:
Q  579 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 671  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  56356 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgat 56264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 715
Target Start/End: Complemental strand, 56355 - 56285
Alignment:
Q  645 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||    
T  56355 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 56285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 544
Target Start/End: Complemental strand, 58790 - 58746
Alignment:
Q  500 attttacgatttcttataaactaagtcatctatgactatatacca 544  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  58790 attttacgatttcttataaactaaatcatttatgactatatacca 58746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 3e-19; HSPs: 5)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 378 - 471
Target Start/End: Complemental strand, 48918 - 48825
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 471  Q
    ||||||||| ||||| | ||| |||||||||||||  || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  48918 cattgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa 48825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 581 - 681
Target Start/End: Complemental strand, 61243 - 61143
Alignment:
Q  581 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 680  Q
    |||| ||||| ||||||| || |||||| | |||||| |||||| |||||||| |||| ||  |||||||| ||||||||||||||| ||| ||||||||    
T  61243 taaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacgatt 61144  T
Q  681 t 681  Q
    |    
T  61143 t 61143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 667
Target Start/End: Complemental strand, 48591 - 48505
Alignment:
Q  581 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 667  Q
    |||| ||||| ||||||||| ||||||| | || ||||| |||| |||||||| |||| ||  ||||||||||||||||||||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatccttcgattttgattg 48505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 715
Target Start/End: Complemental strand, 48591 - 48522
Alignment:
Q  646 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    |||| ||| ||||||||||| ||||| |||||| ||||| |||| |||||| |||||||||| |||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaa 48522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 473
Target Start/End: Complemental strand, 61472 - 61418
Alignment:
Q  419 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 473  Q
    |||||||||||| ||| |||||||||  |||||||||||  ||||||||||||||    
T  61472 ttttgcgactttattcgccttcaacggttcaaatccatatgagaatcccaaaata 61418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 378 - 483
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  378 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 477  Q
    ||||||||||||||| | ||| |||||  |||||||||| ||||||| | ||| |||||||||||| |||||||||||||| ||||||  |||||||  |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  478 aaatcc 483  Q
    ||||||    
T  37196 aaatcc 37191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 681
Target Start/End: Original strand, 885 - 970
Alignment:
Q  596 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| |||||||||||||||| || |||||||||    
T  885 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattt 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 715
Target Start/End: Original strand, 885 - 939
Alignment:
Q  661 ttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaa 715  Q
    ||||||||||| |||| ||||||||||||  ||||| ||||||||||||||||||    
T  885 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaa 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 35188 - 35103
Alignment:
Q  379 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaat 464  Q
    |||||||||||||||  ||| ||||| ||||||||||  ||||||  ||||| |||||||| |||||||||||| ||| |||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1892 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1892
Description:

Target: scaffold1892; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 886 - 951
Alignment:
Q  417 gattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 482  Q
    ||||||||||||||  | | ||||||| ||||||||| |||| ||||||||||||||| |||||||    
T  886 gattttgcgactttacttatcttcaacaactcaaatcgatagcagaatcccaaaataggaaaaatc 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 616 - 681
Target Start/End: Original strand, 145823 - 145888
Alignment:
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||| |||||||| ||||    |||||||||||||||||||||||||| || |||||||||    
T  145823 tcttatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattt 145888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 681
Target Start/End: Original strand, 33173 - 33238
Alignment:
Q  616 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 681  Q
    ||||||||| |||||||| ||||    ||||||||| ||||||||||||||||||| |||| ||||    
T  33173 tcttatatcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttacaattt 33238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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