View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14520_low_17 (Length: 288)
Name: NF14520_low_17
Description: NF14520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14520_low_17 |
 | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 18016952 - 18017221
Alignment:
| Q |
1 |
atttaccaaaagacaatattatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
100 |
Q |
| |
|
|||||||||| | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18016952 |
atttaccaaaggtcaatattatgtgtgtgatgttaacccggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
18017051 |
T |
|
| Q |
101 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
18017052 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgaaaaaaatggaatctctcg |
18017151 |
T |
|
| Q |
201 |
atctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttagaggtgtt |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
18017152 |
atctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttgggggtgtt |
18017221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 19381823 - 19382092
Alignment:
| Q |
1 |
atttaccaaaagacaatattatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
100 |
Q |
| |
|
|||||||||| | ||| | |||||| |||||| ||| |||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||| |
|
|
| T |
19381823 |
atttaccaaaggtcaagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcacccaatagcttgtctggagaaatgccattggaattg |
19381922 |
T |
|
| Q |
101 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcg |
200 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
19381923 |
tttcggcttgttcaagttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcg |
19382022 |
T |
|
| Q |
201 |
atctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttagaggtgtt |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
19382023 |
atctctctaataataagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgtt |
19382092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 50 - 261
Target Start/End: Original strand, 19334991 - 19335202
Alignment:
| Q |
50 |
actattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagtttca |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19334991 |
actattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaaacattaaacttatctcacaatagtttca |
19335090 |
T |
|
| Q |
150 |
aaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggctct |
249 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || | |
|
|
| T |
19335091 |
ttggaacaattcagaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttatggtgaaattcctcggagcatgtctgt |
19335190 |
T |
|
| Q |
250 |
cttaaacttttt |
261 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19335191 |
cttaaccttttt |
19335202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 47 - 270
Target Start/End: Original strand, 19465329 - 19465551
Alignment:
| Q |
47 |
cgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagtt |
146 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
19465329 |
cgaactattgaccttccagccaatagcttgtctggagaagtgccattggaattgtttcggcttgttcaagttcaaacattgaacttatctcacaatagtt |
19465428 |
T |
|
| Q |
147 |
tcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggc |
246 |
Q |
| |
|
| | ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19465429 |
tgactggaacaattccaaaaacgattggaggcatgattaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggc |
19465528 |
T |
|
| Q |
247 |
tctcttaaactttttagaggtgtt |
270 |
Q |
| |
|
|||| |||||||||| |||||||| |
|
|
| T |
19465529 |
tctc-taaactttttggaggtgtt |
19465551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 42 - 259
Target Start/End: Complemental strand, 18872907 - 18872690
Alignment:
| Q |
42 |
ataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaa |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| || |
|
|
| T |
18872907 |
ataggcgaactattgacctttcagccaatcacttgactggagaagtgctattggaattgtttcagcttgttcaagttcaaacattaaacttatctcataa |
18872808 |
T |
|
| Q |
142 |
tagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagc |
241 |
Q |
| |
|
||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
18872807 |
tagtttcgttggaacaattccaaagacgattagaggcatgaacaatatggaatctctcgatctctctagtaataagttttgtggtgaaattcctcagagc |
18872708 |
T |
|
| Q |
242 |
atggctctcttaaacttt |
259 |
Q |
| |
|
||| |||| ||| ||||| |
|
|
| T |
18872707 |
atgtctctgttacacttt |
18872690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 19352322 - 19352595
Alignment:
| Q |
1 |
atttaccaaaagacaatattatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
100 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||| |||| |||||||||| |||||||||||| |
|
|
| T |
19352322 |
atttaccaaaggtcaatattatgtgactgatgttaacccgcataggcgaactgttgacctttcatccaatagcttgtctggagaagttccattggaattg |
19352421 |
T |
|
| Q |
101 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcg |
200 |
Q |
| |
|
|||||||||| |||| ||||| | |||||||||| |||||| | ||| | |||||||| || || ||||||||||||| |||||||||||| |
|
|
| T |
19352422 |
tttcggcttgctcaacttcaaacgttaaacttatatcacaacaatttgattggaacaataccaaaagagattggaggcatgaaaaatgtggaatctctcg |
19352521 |
T |
|
| Q |
201 |
atctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttagaggtgttaaat |
274 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||| |||||| |
|
|
| T |
19352522 |
atctctctaataataagttttttggtgaaattccgcagaccatggctcgcctaaactttttagaggttttaaat |
19352595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 39 - 261
Target Start/End: Original strand, 19394117 - 19394339
Alignment:
| Q |
39 |
cggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctca |
138 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||||||| | ||||| ||||||| |
|
|
| T |
19394117 |
cggataggcgaactgttgacctttcagccaatagcttgtctggagaagtgccattggaattatttcggcttattcaagttcaaacgttaaatctatctca |
19394216 |
T |
|
| Q |
139 |
caatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcag |
238 |
Q |
| |
|
||||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||||||| || ||||||||||||| ||||||||||||||| |
|
|
| T |
19394217 |
caataatttcattggaacaataccgaacacgattggaggcatgaaaaatttggaatctctcgatctttccaataataagttttatggtgaaattcctcaa |
19394316 |
T |
|
| Q |
239 |
agcatggctctcttaaacttttt |
261 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
19394317 |
agcatggctctcttaaacttttt |
19394339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 16678157 - 16678400
Alignment:
| Q |
18 |
attatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagt |
117 |
Q |
| |
|
|||||||| |||||||||| |||| || ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16678157 |
attatgtgtatgatgttaacccggacagaagaactattgacctttcagccaataacttgtctggagaagtgccattggaattgtttcggcttgttcaagt |
16678256 |
T |
|
| Q |
118 |
tcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataag |
217 |
Q |
| |
|
||| | ||||||||||||||||||| ||||| |||| ||| || ||||||||||| |||||| ||||||||||||| |||||||||||||| |
|
|
| T |
16678257 |
ccaaaccttaaacttatctcacaataatttcagtggaaaaataccaaagacgattggtggcatgaaaaatatggaatctctcgacttctctaataataag |
16678356 |
T |
|
| Q |
218 |
ttttttggtgaaattcctcagagcatggctctcttaaacttttt |
261 |
Q |
| |
|
|||| |||||||||||||||||| | |||||||||||||||| |
|
|
| T |
16678357 |
ttttctggtgaaattcctcagagtgcgtctctcttaaacttttt |
16678400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 19354645 - 19354907
Alignment:
| Q |
1 |
atttaccaaaagacaatattatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
100 |
Q |
| |
|
|||||||||| | ||| |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |
|
|
| T |
19354645 |
atttaccaaaggtcaagattatgtgtctgatgttaacccggataggcgaactattgacctttcagtcaatcacttgataggagaagttacattggaattg |
19354744 |
T |
|
| Q |
101 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaaga-cgattggaggcatgnnnnnnntggaatctctc |
199 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||| |||| || || |||||||| || |||| ||||||||||||| |||||||||| |
|
|
| T |
19354745 |
tttcggcttgttcaagttcaaaccttaaacttatctcataataacttgaatggaacaatacc-aagagagattggaggcatgaaaaatatggaatctctt |
19354843 |
T |
|
| Q |
200 |
gatctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttag |
263 |
Q |
| |
|
|| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||| |||||||| |
|
|
| T |
19354844 |
gacctctctagtaataagttttatggtgacattcctcagagcatgtctctcttaacctttttag |
19354907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 18116938 - 18117151
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
18116938 |
gataggcgaactattgacttttcagctaataacttgtctggaaaagtgccattggaattatttcggcttgttaaagttcaaacattaaacttatctcaca |
18117037 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
||| ||||| ||||| || ||||||||||||||||||||| |||||||||||||| | |||||||||||| ||| |||||||||||||||||| |
|
|
| T |
18117038 |
ataatttcattggaactataccgaagacgattggaggcatgaaaaatatggaatctctcgatttttctaataataagctttgtggtgaaattcctcagag |
18117137 |
T |
|
| Q |
241 |
catggctctcttaa |
254 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
18117138 |
catgtctctcttaa |
18117151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 44 - 261
Target Start/End: Original strand, 18147803 - 18148020
Alignment:
| Q |
44 |
aggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaata |
143 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18147803 |
aggcgaactattgacctttcaggcaatagcttgtctggagaattgccattggaattgtttcagcttgttcaagttcaaacattaaacttatctcacaata |
18147902 |
T |
|
| Q |
144 |
gtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcat |
243 |
Q |
| |
|
||| |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
18147903 |
attttgttggaacaataccgaagacgattggaggcatgaaaaatatgaaatctctcgacctctctaataacaagttttttggtgaaattcctcagggcat |
18148002 |
T |
|
| Q |
244 |
ggctctcttaaacttttt |
261 |
Q |
| |
|
| ||||||||| |||||| |
|
|
| T |
18148003 |
gtctctcttaaccttttt |
18148020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 17950782 - 17951001
Alignment:
| Q |
18 |
attatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagt |
117 |
Q |
| |
|
|||||||| |||||||||| | ||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
17950782 |
attatgtgtatgatgttaacctgtataggcgaactattgacctttcagccaatagcttgtctggaaaagtgccattggaattgtttcggcttgttcaagt |
17950881 |
T |
|
| Q |
118 |
tcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataag |
217 |
Q |
| |
|
|||| ||||||||||||||||||| | ||| |||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||| ||| |
|
|
| T |
17950882 |
tcaaacattaaacttatctcacaacaattttgtgggaacaataccgaaaacgattggaggcatgaaaaatatggaatctctcgacctctctaataacaag |
17950981 |
T |
|
| Q |
218 |
ttttttggtgaaattcctca |
237 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
17950982 |
ttttttggtgaaattcctca |
17951001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 17942927 - 17943153
Alignment:
| Q |
44 |
aggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaata |
143 |
Q |
| |
|
|||||||| ||||||||||| | |||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |
|
|
| T |
17942927 |
aggcgaacgattgacctttcggtcaataacttatttggagaagttccattggaattgtttcggcttattcaagttcaaacattgaacttatctcacaata |
17943026 |
T |
|
| Q |
144 |
gtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcat |
243 |
Q |
| |
|
||| | |||| |||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17943027 |
atttgactggaagaattccaaagaccattggaggcatgacaaatatggaatctctagatctctctaataataagttttttggtgaaattcctcagagcat |
17943126 |
T |
|
| Q |
244 |
ggctctcttaaactttttagaggtgtt |
270 |
Q |
| |
|
|||||||||||| ||||| | |||||| |
|
|
| T |
17943127 |
ggctctcttaaattttttgggggtgtt |
17943153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 41 - 267
Target Start/End: Original strand, 19400699 - 19400925
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
||||| |||| ||||||||||||| ||||| |||| |||| ||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||| |
|
|
| T |
19400699 |
gatagacgaattattgacctttcaaccaatagcttgtctggggaactgccattggaattgtttcgacttgttcaagttcaaacgttaaacttatctcaca |
19400798 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
||| ||| | |||||||| || || | |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19400799 |
ataatttgattggaacaataccaaaagtggttggagacatgaaacatatggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
19400898 |
T |
|
| Q |
241 |
catggctctcttaaactttttagaggt |
267 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
19400899 |
catggctctcttaaactttttagaggt |
19400925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 44 - 261
Target Start/End: Original strand, 19437931 - 19438148
Alignment:
| Q |
44 |
aggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaata |
143 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
19437931 |
aggcgaactattgacctttcagcgaataacttgtctggagaagtgccattggaattttttcagcttgttcaagttcaaacgttaaacttatctcacaata |
19438030 |
T |
|
| Q |
144 |
gtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcat |
243 |
Q |
| |
|
||| |||||||| |||||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
19438031 |
attttgttggaacaataccgaagacgattagaggcatgaaaaatatggaatctctcgatctatctaataacaagttttttggtgaaattcctcaaggcat |
19438130 |
T |
|
| Q |
244 |
ggctctcttaaacttttt |
261 |
Q |
| |
|
| ||||||||| |||||| |
|
|
| T |
19438131 |
gtctctcttaaccttttt |
19438148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 19462162 - 19462375
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
19462162 |
gataggcgaactattgacttttcagctaataacttgtctggaaaagtgccattggaattatttcggcttgttaaagttcaaacattaaacttatctcaca |
19462261 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
||| ||||| ||||| || ||||||||||||||||||||| |||||||||||||| | |||||||||||| ||| |||||||||||||| ||| |
|
|
| T |
19462262 |
ataatttcattggaactataccgaagacgattggaggcatgaaaaatatggaatctctcgatttttctaataataagctttgtggtgaaattcctcggag |
19462361 |
T |
|
| Q |
241 |
catggctctcttaa |
254 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
19462362 |
catgtctctcttaa |
19462375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 18166086 - 18166348
Alignment:
| Q |
1 |
atttaccaaaagacaatattatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
100 |
Q |
| |
|
|||||||||| | ||| |||||||| |||||||||| |||| ||||||||||||||| ||||| |||| |||| |||||||||| ||||||||| || |
|
|
| T |
18166086 |
atttaccaaaggtcaagattatgtgtatgatgttaacccggaaaggcgaactattgacatttcaaacaatagcttgtctggagaagtaccattggaaatg |
18166185 |
T |
|
| Q |
101 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcg |
200 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||| ||| | |||||||| || || ||||||||||||| |||||||||||| |
|
|
| T |
18166186 |
tttcggcttgttcaagttcaaacgttaaacttatctcacaataatttgatcggaacaataccaaaagagattggaggcatgaaaaatatggaatctctcg |
18166285 |
T |
|
| Q |
201 |
atctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttag |
263 |
Q |
| |
|
| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
18166286 |
acctctctagtaataagttttatggtgaaattcctcagagcatctctctcttaacctttttag |
18166348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 47 - 261
Target Start/End: Original strand, 25464026 - 25464240
Alignment:
| Q |
47 |
cgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagtt |
146 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| || |
|
|
| T |
25464026 |
cgaactattgacctttcagccaataacttgtctggagaagtgccattggaattggttcggctggttcaagttcaaacattaaacttatctcacaataatt |
25464125 |
T |
|
| Q |
147 |
tcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggc |
246 |
Q |
| |
|
||| |||||||| ||||| ||||||||||||| |||||||||||||||| |||||||| ||| ||| ||||| ||||||||| ||| ||| |
|
|
| T |
25464126 |
tcattggaacaataccgaaagagattggaggcatgaaaaatatggaatctctcgatctttctaataacaagctttgtggtggaattcctcaaagcctggt |
25464225 |
T |
|
| Q |
247 |
tctcttaaacttttt |
261 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
25464226 |
tctcttaaacttttt |
25464240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 44 - 254
Target Start/End: Original strand, 18104319 - 18104529
Alignment:
| Q |
44 |
aggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaata |
143 |
Q |
| |
|
||||||||| ||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |
|
|
| T |
18104319 |
aggcgaacttttgacctttcagctaatagcttgtctggtgaagtgccattggaattgtttcggcttgttcaacttcaaacattgaacttatctcacaata |
18104418 |
T |
|
| Q |
144 |
gtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcat |
243 |
Q |
| |
|
||| | |||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
18104419 |
attttattggaacaataccgaagacgattggaagcatgaaaaatatggaatctctcgacctctctaataacaagttttttggtgaaattcctcaggacat |
18104518 |
T |
|
| Q |
244 |
ggctctcttaa |
254 |
Q |
| |
|
| ||||||||| |
|
|
| T |
18104519 |
gactctcttaa |
18104529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 48 - 261
Target Start/End: Original strand, 18109419 - 18109632
Alignment:
| Q |
48 |
gaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagttt |
147 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| | ||| |
|
|
| T |
18109419 |
gaactattgacctttcagccaatagcttgcctggagaagtgccattggaattgtttctgcttgttcaagttcaaacattaaacttatctcacaacaattt |
18109518 |
T |
|
| Q |
148 |
caaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggct |
247 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||| | ||| || |
|
|
| T |
18109519 |
tgtgggaacaataccgaaaacgattggaggcatgaaaaatatggaatctctcgacctctctaataacaagttttttggtgaaattccccagggtatgtct |
18109618 |
T |
|
| Q |
248 |
ctcttaaacttttt |
261 |
Q |
| |
|
||||| | |||||| |
|
|
| T |
18109619 |
ctcttgaccttttt |
18109632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 47 - 261
Target Start/End: Original strand, 19425666 - 19425880
Alignment:
| Q |
47 |
cgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagtt |
146 |
Q |
| |
|
||||| |||||||||||||| ||| |||| ||||||||||||| |||||||||||| |||||||||| ||||| | ||||||||||||||||||| || |
|
|
| T |
19425666 |
cgaaccattgacctttcagcaaatagcttgtctggagaagtgcctttggaattgtttaggcttgttcagcttcaaacgttaaacttatctcacaataatt |
19425765 |
T |
|
| Q |
147 |
tcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggc |
246 |
Q |
| |
|
| | |||||||| || || ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
19425766 |
tgattggaacaataccaaaagtgattggaggcatgaaaaatatggaatctctcgatctctctaataataagttttgtggtgaaattcctcagagcatgtc |
19425865 |
T |
|
| Q |
247 |
tctcttaaacttttt |
261 |
Q |
| |
|
| |||||| |||||| |
|
|
| T |
19425866 |
tgtcttaaccttttt |
19425880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 47 - 244
Target Start/End: Complemental strand, 17726561 - 17726364
Alignment:
| Q |
47 |
cgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagtt |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||| ||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
17726561 |
cgaactattgacctttcagccaatagcttgtctggtgaagtaacatcggaattatttcggcttgttcaagttcaaacattaaacttatctcacaataatt |
17726462 |
T |
|
| Q |
147 |
tcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatg |
244 |
Q |
| |
|
||| |||||||| ||||| || |||||||||||| ||||||||||||| ||||| || ||||| |||| |||||||||||||||||||||| |
|
|
| T |
17726461 |
tcattggaacaataccgaaaacaattggaggcatgaaaaatttggaatctctcgacctctccaacaataatttttctggtgaaattcctcagagcatg |
17726364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 47 - 244
Target Start/End: Complemental strand, 19027790 - 19027593
Alignment:
| Q |
47 |
cgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagtt |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||| ||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
19027790 |
cgaactattgacctttcagccaatagcttgtctggtgaagtaacatcggaattatttcggcttgttcaagttcaaacattaaacttatctcacaataatt |
19027691 |
T |
|
| Q |
147 |
tcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatg |
244 |
Q |
| |
|
||| |||||||| ||||| || |||||||||||| ||||||||||||| ||||| || ||||| |||| |||||||||||||||||||||| |
|
|
| T |
19027690 |
tcattggaacaataccgaaaacaattggaggcatgaaaaatttggaatctctcgacctctccaacaataatttttctggtgaaattcctcagagcatg |
19027593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 47 - 254
Target Start/End: Complemental strand, 14895414 - 14895207
Alignment:
| Q |
47 |
cgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaatagtt |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || |
|
|
| T |
14895414 |
cgaactattgacctttcagccaatagcttgtccggagaagtgccattggaattgtttcggcttgttcaagttcaaacgttaaacttatctcacaataatt |
14895315 |
T |
|
| Q |
147 |
tcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggc |
246 |
Q |
| |
|
| | |||||||| || || |||||| ||||| |||||||||| || ||||||| ||||||||||| |||||||||||| ||||||||| | |
|
|
| T |
14895314 |
tgattggaacaataccaaaagatattggacgcatgaagaatatggaatctcttgacctctctagtaataagttttatggtgaaattccgcagagcatgtc |
14895215 |
T |
|
| Q |
247 |
tctcttaa |
254 |
Q |
| |
|
|||||||| |
|
|
| T |
14895214 |
tctcttaa |
14895207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 19376552 - 19376812
Alignment:
| Q |
1 |
atttaccaaaagacaatattatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
100 |
Q |
| |
|
|||||||||| | ||| | |||||| ||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||| |
|
|
| T |
19376552 |
atttaccaaaggtcaagaatatgtgtatgatgttaagccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattg |
19376651 |
T |
|
| Q |
101 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcg |
200 |
Q |
| |
|
|||| ||||||||||||||| | ||||||||||||||||||| ||| |||||||| || || |||||| ||||| |||||||||| | |
|
|
| T |
19376652 |
tttcaccttgttcaagttcaaacgttaaacttatctcacaataattttgttggaacaataccaaaagatattggatgcatgaagaatatggaatctcttg |
19376751 |
T |
|
| Q |
201 |
atctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaacttttt |
261 |
Q |
| |
|
| ||||||| ||||||||||| ||||||||||||||||| |||| || |||||| |||||| |
|
|
| T |
19376752 |
acctctctagtaataagttttatggtgaaattcctcagaccatgtctatcttaaccttttt |
19376812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 44 - 261
Target Start/End: Original strand, 19456270 - 19456487
Alignment:
| Q |
44 |
aggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaata |
143 |
Q |
| |
|
||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
19456270 |
aggcgaactattgacgattcatccaatagcttgtctggagaagtgccattggaattgtttcggtttgttcaggttcaaacattaaacttatctcacaata |
19456369 |
T |
|
| Q |
144 |
gtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcat |
243 |
Q |
| |
|
|||| || || || |||||||| |||||||| ||| ||||||||||||| | || || |||||||||| |||||||||||| |||||||| |
|
|
| T |
19456370 |
atttctttggtaccataccgaagacaattggaggtatgaaaaatatggaatctctcgaattttccaaaaataagttttgtggtgaaattccacagagcat |
19456469 |
T |
|
| Q |
244 |
ggctctcttaaacttttt |
261 |
Q |
| |
|
| ||||||||| |||||| |
|
|
| T |
19456470 |
gtctctcttaaccttttt |
19456487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 39 - 261
Target Start/End: Original strand, 19415152 - 19415374
Alignment:
| Q |
39 |
cggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctca |
138 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||| ||||| ||||||||| | ||| |||||||||||||||| |
|
|
| T |
19415152 |
cggataggcgaactattgacctttcatccaatagcttgtctggagaagtgacattgcaattatttcgacttgttcaaatacaaacattaaacttatctca |
19415251 |
T |
|
| Q |
139 |
caatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcag |
238 |
Q |
| |
|
||||| ||| | ||||||||||| ||| |||||| | |||| |||||||||| || ||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
19415252 |
caataatttgactggaacaattcctaagctgattggtgacatgaaaaatatggaatctctagacctctcaaataataagttctacggtgaaattcctcag |
19415351 |
T |
|
| Q |
239 |
agcatggctctcttaaacttttt |
261 |
Q |
| |
|
|||||| || |||||| |||||| |
|
|
| T |
19415352 |
agcatgtctttcttaaccttttt |
19415374 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 267
Target Start/End: Original strand, 8460537 - 8460762
Alignment:
| Q |
42 |
ataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaa |
141 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||| ||||| ||||||||| |||| |||||||||||||| |
|
|
| T |
8460537 |
ataggcgaactattgacctttcagctaataacttgtctggagaagtgccgttggaattatttcatcttgtccaagttcaaacattgaacttatctcacaa |
8460636 |
T |
|
| Q |
142 |
tagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagc |
241 |
Q |
| |
|
|| ||| | |||||||| || |||| ||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8460637 |
taatttgattggaacaatacccaagatgattggaggcatgaaatatatggaatcactcgacctctctaataataagttttgtggtgaaattcctcagagc |
8460736 |
T |
|
| Q |
242 |
atggctctcttaaactttttagaggt |
267 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
8460737 |
atggctctcttaaactttttagaggt |
8460762 |
T |
|
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Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 44 - 274
Target Start/End: Complemental strand, 2709600 - 2709370
Alignment:
| Q |
44 |
aggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcacaata |
143 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2709600 |
aggcgaactattgacctttcagccaatagcttgtctggagaagtgccattggaattatttcaacttgttcaagttcaatcattgaacttatctcacaata |
2709501 |
T |
|
| Q |
144 |
gtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcat |
243 |
Q |
| |
|
||| | |||||||| || |||| |||||||| |||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
2709500 |
atttgactggaacaatacccaagatgattggagacatgaaaaacatggaatctctcgatctctctaacaataaattttttggtgaaattcctcagagcat |
2709401 |
T |
|
| Q |
244 |
ggctctcttaaactttttagaggtgttaaat |
274 |
Q |
| |
|
|||| || ||| || ||||||||| |||||| |
|
|
| T |
2709400 |
ggctatcataacctatttagaggttttaaat |
2709370 |
T |
|
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Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 15536463 - 15536699
Alignment:
| Q |
1 |
atttaccaaaagacaatattatgtgactgatgttaactcggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattg |
100 |
Q |
| |
|
|||||||||| | ||| |||||||| |||| | |||||||| || |||||||||||||||||||||||| |||| ||| ||| |||||||||||||| |
|
|
| T |
15536463 |
atttaccaaaggtcaagattatgtgtatgatatcaactcggaaagacgaactattgacctttcagccaatagcttgtttggggaactgccattggaattg |
15536562 |
T |
|
| Q |
101 |
tttcggcttgttcaagttcaatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcg |
200 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||| || ||||||||||| |||||| |||||||||||| |
|
|
| T |
15536563 |
tttcggcttgttcaagttcaaacgttaaacttatctcacaataattttgttggaacaataccaaagacgattggcggcatgataaacatggaatctctcg |
15536662 |
T |
|
| Q |
201 |
atctctctaataataagttttttggtgaaattcctca |
237 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15536663 |
atctctctaataataagttttatggtgaaattcctca |
15536699 |
T |
|
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Target: scaffold0648 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 41 - 261
Target Start/End: Complemental strand, 3131 - 2911
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||| ||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
3131 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
3032 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
|| ||| | |||||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
3031 |
atcattttactggaacaataccaaagacgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggag |
2932 |
T |
|
| Q |
241 |
catggctctcttaaacttttt |
261 |
Q |
| |
|
|||| ||| |||||||||||| |
|
|
| T |
2931 |
catgtctcacttaaacttttt |
2911 |
T |
|
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Target: scaffold0274 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 41 - 261
Target Start/End: Original strand, 21555 - 21775
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||| ||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
21555 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
21654 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
|| ||| | |||||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
21655 |
atcattttactggaacaataccaaagacgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggag |
21754 |
T |
|
| Q |
241 |
catggctctcttaaacttttt |
261 |
Q |
| |
|
|||| ||| |||||||||||| |
|
|
| T |
21755 |
catgtctcacttaaacttttt |
21775 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 258
Target Start/End: Complemental strand, 2600 - 2383
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||| ||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
2600 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
2501 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
|| ||| | |||||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
2500 |
atcattttactggaacaataccaaagacgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggag |
2401 |
T |
|
| Q |
241 |
catggctctcttaaactt |
258 |
Q |
| |
|
|||| ||| ||||||||| |
|
|
| T |
2400 |
catgtctcacttaaactt |
2383 |
T |
|
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Target: scaffold0640 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 258
Target Start/End: Original strand, 6376 - 6593
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||| ||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
6376 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
6475 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
|| ||| | |||||||| || |||| ||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6476 |
atcattttactggaacaataccaaagatgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcagag |
6575 |
T |
|
| Q |
241 |
catggctctcttaaactt |
258 |
Q |
| |
|
|||| ||| ||||||||| |
|
|
| T |
6576 |
catgtctcacttaaactt |
6593 |
T |
|
Back To:
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Target: scaffold0271 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 258
Target Start/End: Original strand, 11471 - 11688
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||| ||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
11471 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
11570 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
|| ||| | |||||||| || |||| ||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11571 |
atcattttactggaacaataccaaagaagattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcagag |
11670 |
T |
|
| Q |
241 |
catggctctcttaaactt |
258 |
Q |
| |
|
|||| ||| ||||||||| |
|
|
| T |
11671 |
catgtctcacttaaactt |
11688 |
T |
|
Back To:
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Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 41 - 261
Target Start/End: Complemental strand, 13665980 - 13665760
Alignment:
| Q |
41 |
gataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaatcattaaacttatctcaca |
140 |
Q |
| |
|
||||| |||||||||||||||||||| ||| |||| ||||||| ||||| ||||||| |||| |||||||||||||||| |||| ||||||||||||| |
|
|
| T |
13665980 |
gatagacgaactattgacctttcagctaatagcttgtttggagaattgccactggaattatttcagcttgttcaagttcaaacattgaacttatctcaca |
13665881 |
T |
|
| Q |
141 |
atagtttcaaaggaacaattccgaagacgattggaggcatgnnnnnnntggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
240 |
Q |
| |
|
||| ||| | |||||||| || | ||||||| |||| |||||||| | || ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
13665880 |
ataatttgactggaacaatacccctgctaattggagacatgaaacttatggaatctttggacttctctaataataagttttttggtgaaattcctcggag |
13665781 |
T |
|
| Q |
241 |
catggctctcttaaacttttt |
261 |
Q |
| |
|
|||| || |||||| |||||| |
|
|
| T |
13665780 |
catgtctatcttaaccttttt |
13665760 |
T |
|
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