View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14520_low_20 (Length: 245)
Name: NF14520_low_20
Description: NF14520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14520_low_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23215580 - 23215336
Alignment:
| Q |
1 |
cattggtcagattttgaagagaactgaggttaaaaccactgtacaattgtgttatttatcagttaaaaagtaacaaacaaattttgttttgtgatataat |
100 |
Q |
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| T |
23215580 |
cattggtcagattttgaagagaactgaggttaaaaccactgtacaattgtgttatttatcagttaaaaagtaacaaacaaattttgttttgtgatataat |
23215481 |
T |
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| Q |
101 |
gtactaatattcatcggtttctactttttacatgtttaaagaatgtaacaannnnnnnnctttaatatttgactttgcagtattcaataacaacaaattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
23215480 |
gtactaatattcatcggtttctactttttacatgtttaaagaatgtaacaattttttttctttaatatttgactttgcagtattcaataacaacaaattt |
23215381 |
T |
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| Q |
201 |
tggacactgaatgatgttattgaatcttgcatgatattcttcgac |
245 |
Q |
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|||||||||||||||||||||||||||||||||||| | |||||| |
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| T |
23215380 |
tggacactgaatgatgttattgaatcttgcatgatacttttcgac |
23215336 |
T |
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