View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14520_low_24 (Length: 233)
Name: NF14520_low_24
Description: NF14520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14520_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 6506128 - 6505911
Alignment:
| Q |
1 |
gaaaatttggaagatattcactcttgannnnnnnagagagagaaacaactttcacaaaaaacaaatacaatcattcatttttcactatagtacatgtttt |
100 |
Q |
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| T |
6506128 |
gaaaatttggaagatattcactcttgatttttt-agagagagaaacaactttcacaaaaaacaaatacaatcattcatttttcactaaagtacatgtttt |
6506030 |
T |
|
| Q |
101 |
gtgtgtgtttgtgactttcactgttagttagcacatagcttcaaactcaaatgacattgtaggttctgaagagggtttatgtttgttcttgtttcttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6506029 |
gtgtgtgtttgtgactttcactgttagttagcacatagcttcaaactcaaatgacattgtaggttctgaagagggtttatgtttgttcttgtttcttcat |
6505930 |
T |
|
| Q |
201 |
ttcttcaatatacactttg |
219 |
Q |
| |
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||||| ||||||||||||| |
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| T |
6505929 |
ttctttaatatacactttg |
6505911 |
T |
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