View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14525_low_8 (Length: 276)
Name: NF14525_low_8
Description: NF14525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14525_low_8 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 24975269 - 24974994
Alignment:
| Q |
1 |
ccgttcatccttggcctgaatggatctcgttcgttgatcgattaagagctaaaggctatctctctaaatcggctgatgataacagtgtttactctaatat |
100 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24975269 |
ccgttcatccttggcctgaatggatctcgttcgtcgatcgattaagagctaaaggctatctctctaaatcggctgatgataacagtgtttactctgatat |
24975170 |
T |
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| Q |
101 |
caatctcttgaaagatgcttctctttccttcgctcgtgaccgttacgatgttttcaagttcgttttctttcctttcctttcagttatttgaattgattaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
24975169 |
caatctcttgaaagatgcttctctttccttcgctcgtgaccgttacgatgttttcaagttcgttttctttcctttcctttcaattatttgaattgattaa |
24975070 |
T |
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| Q |
201 |
ttgtgtagaaaaaagcacctacacttctaattgatgacatgacattgatacatgattacattcaattaattcattt |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
24975069 |
ttgtgtagaaaaaagcacctacacttctaattgatgacatgacattgatacgtgattacattcaattaattcattt |
24974994 |
T |
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