View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14525_low_9 (Length: 253)

Name: NF14525_low_9
Description: NF14525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14525_low_9
NF14525_low_9
[»] chr2 (12 HSPs)
chr2 (1-247)||(26411342-26411588)
chr2 (122-179)||(13527320-13527377)
chr2 (112-176)||(34807371-34807435)
chr2 (107-179)||(4056583-4056655)
chr2 (112-179)||(13350677-13350744)
chr2 (133-176)||(24020577-24020620)
chr2 (84-179)||(38843490-38843584)
chr2 (122-179)||(2265554-2265611)
chr2 (122-179)||(17263161-17263218)
chr2 (107-167)||(15250707-15250767)
chr2 (107-179)||(32622072-32622144)
chr2 (107-155)||(41879683-41879731)
[»] chr5 (9 HSPs)
chr5 (112-179)||(11100028-11100095)
chr5 (88-171)||(5522082-5522165)
chr5 (112-179)||(6350215-6350282)
chr5 (122-177)||(31408761-31408816)
chr5 (122-176)||(16475376-16475430)
chr5 (124-176)||(13947529-13947581)
chr5 (112-179)||(22653378-22653445)
chr5 (122-179)||(12713988-12714045)
chr5 (112-176)||(9626578-9626642)
[»] chr4 (24 HSPs)
chr4 (112-179)||(4464844-4464911)
chr4 (87-167)||(15015277-15015357)
chr4 (112-179)||(17716363-17716430)
chr4 (123-176)||(21633217-21633270)
chr4 (112-177)||(22431478-22431543)
chr4 (122-179)||(25198719-25198776)
chr4 (107-164)||(30622743-30622799)
chr4 (85-166)||(50503200-50503281)
chr4 (107-179)||(30365470-30365542)
chr4 (124-176)||(36197525-36197577)
chr4 (112-179)||(4390876-4390943)
chr4 (112-179)||(11051041-11051108)
chr4 (112-175)||(20148172-20148235)
chr4 (116-179)||(31435683-31435746)
chr4 (116-167)||(44433223-44433274)
chr4 (122-176)||(37970991-37971045)
chr4 (117-179)||(52714186-52714248)
chr4 (122-179)||(7707074-7707131)
chr4 (122-179)||(28307873-28307930)
chr4 (112-177)||(29061008-29061073)
chr4 (122-179)||(45780173-45780230)
chr4 (122-179)||(46895948-46896005)
chr4 (123-179)||(8942576-8942632)
chr4 (112-176)||(20512231-20512295)
[»] chr1 (23 HSPs)
chr1 (88-179)||(3391744-3391835)
chr1 (122-179)||(26844430-26844487)
chr1 (66-179)||(28867854-28867967)
chr1 (91-179)||(26063474-26063562)
chr1 (112-179)||(34319230-34319297)
chr1 (112-179)||(49239381-49239448)
chr1 (107-164)||(38596765-38596822)
chr1 (135-179)||(15732576-15732620)
chr1 (116-179)||(13120988-13121051)
chr1 (116-179)||(33525205-33525268)
chr1 (122-176)||(34320083-34320137)
chr1 (122-179)||(1507130-1507187)
chr1 (122-179)||(2022718-2022775)
chr1 (122-179)||(17047412-17047469)
chr1 (122-179)||(17499275-17499332)
chr1 (122-179)||(25602640-25602697)
chr1 (122-179)||(27658727-27658784)
chr1 (122-179)||(33561306-33561363)
chr1 (122-179)||(39827273-39827330)
chr1 (67-104)||(52702370-52702407)
chr1 (88-152)||(9769131-9769195)
chr1 (107-155)||(25135677-25135725)
chr1 (112-164)||(40934875-40934927)
[»] chr6 (5 HSPs)
chr6 (85-179)||(5300962-5301056)
chr6 (88-171)||(3107269-3107352)
chr6 (123-176)||(22756932-22756985)
chr6 (122-179)||(559017-559074)
chr6 (112-177)||(34440378-34440443)
[»] chr8 (11 HSPs)
chr8 (124-177)||(18531692-18531745)
chr8 (125-179)||(31523170-31523224)
chr8 (112-179)||(2731272-2731339)
chr8 (141-179)||(14172376-14172414)
chr8 (89-155)||(40046269-40046335)
chr8 (112-161)||(37296071-37296120)
chr8 (122-179)||(44826803-44826860)
chr8 (135-179)||(3427130-3427174)
chr8 (112-179)||(38782516-38782584)
chr8 (124-176)||(39678058-39678110)
chr8 (123-179)||(45152714-45152770)
[»] scaffold0041 (1 HSPs)
scaffold0041 (112-179)||(72149-72216)
[»] scaffold0016 (1 HSPs)
scaffold0016 (112-175)||(84969-85032)
[»] chr7 (9 HSPs)
chr7 (112-179)||(40894068-40894135)
chr7 (116-179)||(17845243-17845306)
chr7 (112-179)||(23030516-23030583)
chr7 (112-179)||(35001572-35001639)
chr7 (122-179)||(9488074-9488131)
chr7 (84-177)||(24171492-24171585)
chr7 (122-179)||(31511959-31512016)
chr7 (84-152)||(19756691-19756759)
chr7 (107-179)||(27867068-27867140)
[»] chr3 (9 HSPs)
chr3 (108-179)||(2812667-2812738)
chr3 (112-179)||(32025642-32025709)
chr3 (122-179)||(44748245-44748302)
chr3 (112-179)||(20451127-20451194)
chr3 (112-179)||(42218297-42218364)
chr3 (107-177)||(52594729-52594799)
chr3 (122-179)||(35500285-35500342)
chr3 (122-179)||(44846300-44846357)
chr3 (123-179)||(40479446-40479502)
[»] scaffold0173 (1 HSPs)
scaffold0173 (124-179)||(22301-22356)
[»] scaffold0031 (1 HSPs)
scaffold0031 (122-177)||(129596-129651)
[»] scaffold0343 (1 HSPs)
scaffold0343 (107-155)||(9962-10010)


Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 26411588 - 26411342
Alignment:
Q  1 cttttcccagactattaatgaatattactgctcgaaagatattttaaggtaacttatcaaatataaggctttgtttggaaaaaatagctgatagcttata 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26411588 cttttctcagactattaatgaatattactgctcgaaagatattttaagctaacttatcaaatgtaaggctttgtttggaaaaaatagctgatagcttata 26411489  T
Q  101 gccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgtnnnnnnnngataaataataat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||||||||||||    
T  26411488 gccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccggttcaactaactaataaatgtaaaaaaaagataaataataat 26411389  T
Q  201 atgttataagctcaatccctatttgaaattgtgtctggagaataatc 247  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||||    
T  26411388 atgttataagctcaaacgctatttgaaatagtgtctggagaataatc 26411342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 13527320 - 13527377
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || ||||||||||| |||||||||||    
T  13527320 gctgataagctaattgaagtgtttggtaaaaatagcagttcaactagctaataaatgt 13527377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 34807435 - 34807371
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||| || |||||||||  |||| |||||||||||||||||| | ||||||||||||||||||    
T  34807435 atgactgatagctgataagctaattaaagtgtttggtaaaattaacggttcaactaactaataaa 34807371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 4056655 - 4056583
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||| ||||||||  |||||||||  |||| |||||||||||||||||| | |||||||| ||| ||||||||    
T  4056655 gactgatgacttacagctgataagctaattaaagtgtttggtaaaattaacggttcaactgactgataaatgt 4056583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 13350677 - 13350744
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||| || |||||||||  || ||||||||||||||||| || | ||||||||| |||||||||||    
T  13350677 atgactgatagctgataagctaactgaagtgtttggtaaaaataacggttcaactagctaataaatgt 13350744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 24020620 - 24020577
Alignment:
Q  133 aattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||| |||||||||||||||||| | ||||||||||||||||||    
T  24020620 aattaaagtgtttggtaaaattagcggttcaactaactaataaa 24020577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 38843584 - 38843490
Alignment:
Q  84 atagctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||| |||||||||||||| |  || |||||||| || ||| |||||  ||| ||||||||||||||||||| | ||||||||| || ||||||||    
T  38843584 atagttgatagcttatagctgatgattaatgactgatagcttataagctaat-gaagtgtttggtaaaattagcggttcaactagctgataaatgt 38843490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 2265554 - 2265611
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  2265554 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 2265611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 17263161 - 17263218
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||| || ||||||||||||||||| || | ||||||||| || ||||||||    
T  17263161 gctgataagttaactgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 17263218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 15250767 - 15250707
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaacta 167  Q
    |||| ||||||||| |||||||||  |||  |||||||||||| ||||| |||||||||||    
T  15250767 gactgatgacttatagctgataagctaatgaaagtgtttggtataattagcagttcaacta 15250707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 32622072 - 32622144
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||| ||||||||  ||| ||||| | |||||||||||||||||||||   |||||||||  ||||||||||    
T  32622072 gactagtgacttataactgctaagttagttgaagtgtttggtaaaattatgtgttcaactagttaataaatgt 32622144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 41879731 - 41879683
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaatta 155  Q
    ||||||| | |||| |||||||||| ||||||| |||||||||||||||    
T  41879731 gactaataatttatagctgataagttaattgaaatgtttggtaaaatta 41879683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 11100028 - 11100095
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| | |||||||||||| ||||||||    
T  11100028 atgacttatagctgataagctaattgaagtgtttggtaaaattagcggttcaactaactgataaatgt 11100095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 5522165 - 5522082
Alignment:
Q  88 ctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaacta 171  Q
    ||||||| ||||||| |  |||| |||||| || | |||||||| ||||||||||||||||||||||| | | |||||||||||    
T  5522165 ctgatagtttatagctgatgactgatgactgatagttgataagttaattgaagtgtttggtaaaattagcggctcaactaacta 5522082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 6350282 - 6350215
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||  |||| |||||||||||||||||| | ||||||||| || ||||||||    
T  6350282 atgacttatagctgataagctaattaaagtgtttggtaaaattagcggttcaactagctgataaatgt 6350215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 31408816 - 31408761
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    |||||||||  ||||||||| ||||||||||||| | |||||||||||||||||||    
T  31408816 gctgataagctaattgaagtatttggtaaaattaacggttcaactaactaataaat 31408761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 16475430 - 16475376
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||||||  |||| |||||||||||||||||| | ||||||||||||||||||    
T  16475430 gctgataagctaattaaagtgtttggtaaaattagcggttcaactaactaataaa 16475376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 13947529 - 13947581
Alignment:
Q  124 tgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||||| |||||||||||||| |||||||| | |||||||||| |||||||    
T  13947529 tgataagttaattgaagtgtttgataaaattaacggttcaactaattaataaa 13947581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 22653445 - 22653378
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| | |||||||  | ||||||||||||||||||||| | ||||||||| || ||||||||    
T  22653445 atgacttatagttgataagctagttgaagtgtttggtaaaattagcggttcaactagctgataaatgt 22653378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 12714045 - 12713988
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||| || ||||||||||||||||| || | ||||||||| || ||||||||    
T  12714045 gctgataagttaactgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 12713988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 9626578 - 9626642
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    ||||||||| ||||||||   |||| |||||||||||||||||| | ||||||||| || |||||    
T  9626578 atgacttatagctgataaactaattaaagtgtttggtaaaattagcggttcaactagctgataaa 9626642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 4464844 - 4464911
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||  |||||||||||| |||||||||| | |||||||||||| ||||||||    
T  4464844 atgacttatagctgataagctaattgaagtgttcggtaaaattaacggttcaactaactgataaatgt 4464911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 15015357 - 15015277
Alignment:
Q  87 gctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaacta 167  Q
    |||||||||||||||  || |||| ||||||  | |||||||||  ||||||||||||||||||||||| | |||||||||    
T  15015357 gctgatagcttataggtggtgactgatgactagtagctgataagctaattgaagtgtttggtaaaattagcggttcaacta 15015277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 17716430 - 17716363
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||  | |||||||||||||||||||||   |||||||||||| ||||||||    
T  17716430 atgacttatagctgataagctagttgaagtgtttggtaaaattagtggttcaactaacttataaatgt 17716363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 21633217 - 21633270
Alignment:
Q  123 ctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    ||||||||  |||| |||||||||||||||||| |||||||||||| |||||||    
T  21633217 ctgataagctaattaaagtgtttggtaaaattagcagttcaactaagtaataaa 21633270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 22431543 - 22431478
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    ||||||||| |||||||||  | |||||||||||||||||||||   |||||||||||| ||||||    
T  22431543 atgacttatagctgataagctagttgaagtgtttggtaaaattagtggttcaactaacttataaat 22431478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 25198719 - 25198776
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  || ||||||||||||||||| || |||||||||||||| ||||||||    
T  25198719 gctgataagctaactgaagtgtttggtaaaaataacagttcaactaactgataaatgt 25198776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 30622743 - 30622799
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaa 164  Q
    |||| ||||||||| ||||||||| | |||||||||||||||||||||| ||||||||    
T  30622743 gactgatgacttatagctgataag-ctattgaagtgtttggtaaaattaacagttcaa 30622799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 50503281 - 50503200
Alignment:
Q  85 tagctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaact 166  Q
    |||||||||||||||||| |  | || || ||| || |||||||||| |||| |||||||||||||||||| | ||||||||    
T  50503281 tagctgatagcttatagctgatggctgataactgatagctgataagttaatttaagtgtttggtaaaattaacggttcaact 50503200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 30365470 - 30365542
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||||||| |||||||||  | ||||| ||||||||||||||| | ||| |||| ||| ||||||||    
T  30365470 gactaatgacttatagctgataagctagttgaaatgtttggtaaaattagcggtttaactgacttataaatgt 30365542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 36197577 - 36197525
Alignment:
Q  124 tgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||||||||    
T  36197577 tgataagctaattaaagtgtttggtaaaattaacggttcaactaactaataaa 36197525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 4390876 - 4390943
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| ||| |||||  ||||||||||||||||||||| | | ||||||||| || ||||||||    
T  4390876 atgacttatagcttataagctaattgaagtgtttggtaaaataagctgttcaactagctgataaatgt 4390943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 11051108 - 11051041
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| ||||||||   | ||||||||||||||||||||| | |||||||| ||| ||||||||    
T  11051108 atgacttatagctgataaactagttgaagtgtttggtaaaattagcggttcaactgacttataaatgt 11051041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 20148172 - 20148235
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataa 175  Q
    ||||||||| |||||||||  ||||||| ||||||||||||||| | |||||| ||||| ||||    
T  20148172 atgacttatagctgataagctaattgaactgtttggtaaaattatcggttcaattaacttataa 20148235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 31435746 - 31435683
Alignment:
Q  116 cttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||| |||||||||  | |||||| |||||||||||||| ||||||||||| || ||||||||    
T  31435746 cttatagctgataagctacttgaagcgtttggtaaaattaacagttcaactagctgataaatgt 31435683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 44433274 - 44433223
Alignment:
Q  116 cttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaacta 167  Q
    ||||| |||||||||  ||||||||||||||||||||||| || ||||||||    
T  44433274 cttatagctgataagctaattgaagtgtttggtaaaattagcaattcaacta 44433223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 37971045 - 37970991
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||||||  || |||||||||||||||||||| | |||||||||||| |||||    
T  37971045 gctgataagctaactgaagtgtttggtaaaattagcggttcaactaacttataaa 37970991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 52714248 - 52714186
Alignment:
Q  117 ttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||| |||||||||| | |||||||||||||||||| || | ||||||||| || ||||||||    
T  52714248 ttatagctgataagttagttgaagtgtttggtaaaactagcggttcaactagctgataaatgt 52714186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 7707131 - 7707074
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  7707131 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 7707074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 28307930 - 28307873
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||| || ||||||||||||||||| || | ||||||||| || ||||||||    
T  28307930 gctgataagttaactgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 28307873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 29061073 - 29061008
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    ||||||||| |||||||||  | ||||||||||||||||||||| | ||  |||||||| ||||||    
T  29061073 atgacttatagctgataagctagttgaagtgtttggtaaaattagcggtataactaacttataaat 29061008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 45780173 - 45780230
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  || ||||||||||||||||| || | |||||||||||| ||||||||    
T  45780173 gctgataagctaactgaagtgtttggtaaaaatagcggttcaactaactgataaatgt 45780230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 46896005 - 46895948
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  || ||||||||||||||||| || | ||||||||| |||||||||||    
T  46896005 gctgataagctaactgaagtgtttggtaaaaatagcggttcaactagctaataaatgt 46895948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 8942632 - 8942576
Alignment:
Q  123 ctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| || ||||||||||||||||| || | ||||||||| || ||||||||    
T  8942632 ctgataagttaactgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 8942576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 20512295 - 20512231
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||| || |||||||||  |||| || | |||| |||||||| ||||||||||||||||||||    
T  20512295 atgactgatagctgataagctaattaaaatctttgataaaattagcagttcaactaactaataaa 20512231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 3391835 - 3391744
Alignment:
Q  88 ctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||||||||| |  || |||||||| || ||| |||||  ||||||||||||||||||||||| | ||||||||| || ||||||||    
T  3391835 ctgatagcttatagctgatgattaatgactgatagcttataagctaattgaagtgtttggtaaaattagcggttcaactagctgataaatgt 3391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 26844487 - 26844430
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||| || ||||||||||||||||| || |||||||||||||| ||||||||    
T  26844487 gctgataagttaactgaagtgtttggtaaaagtagcagttcaactaactgataaatgt 26844430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 28867854 - 28867967
Alignment:
Q  66 aggctttgtttggaaaaaatagctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaac 165  Q
    ||||| ||||||| ||||||||| ||||||| ||||| |  || | || |||||| |||||||||| | |||||||||||||||||| || | ||||||     
T  28867854 aggctctgtttggtaaaaatagcggatagctgatagctgatgattgataacttatagctgataagttagttgaagtgtttggtaaaactagcggttcaat 28867953  T
Q  166 taactaataaatgt 179  Q
    || || ||||||||    
T  28867954 tagctgataaatgt 28867967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 26063474 - 26063562
Alignment:
Q  91 atagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||||| |  |||| |||||| || ||| |||||| |||| ||||||||| |||||||| ||||||||||| || ||||||||    
T  26063474 atagcttatagctgatgactgatgactgatagcttataagttaattaaagtgtttgataaaattaacagttcaactagctgataaatgt 26063562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 34319297 - 34319230
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||  | |||||||||||||||||||||   |||||||||||| ||||||||    
T  34319297 atgacttatagctgataagctagttgaagtgtttggtaaaattagtggttcaactaacttataaatgt 34319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 49239381 - 49239448
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||  | |||||||||||| |||||||| |||||||||| ||| ||||||||    
T  49239381 atgacttatagctgataagctagttgaagtgtttgataaaattagcagttcaactgacttataaatgt 49239448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 38596822 - 38596765
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaa 164  Q
    |||| ||||||||| |||||||||  | ||||||||||||||||||||| ||||||||    
T  38596822 gactgatgacttatagctgataagctagttgaagtgtttggtaaaattagcagttcaa 38596765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 15732620 - 15732576
Alignment:
Q  135 ttgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  15732620 ttgaaatgtttggtaaaattaacagttcaactaactgataaatgt 15732576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 13120988 - 13121051
Alignment:
Q  116 cttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||| |||||||||  || ||||||||||||||||| || ||||||||||| || ||||||||    
T  13120988 cttatagctgataagctaactgaagtgtttggtaaaaatagcagttcaactagctgataaatgt 13121051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 33525268 - 33525205
Alignment:
Q  116 cttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||| |||||||||| || ||||||||||||||||| || | ||||||||| || ||||||||    
T  33525268 cttatagctgataagttaactgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 33525205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 34320137 - 34320083
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||||||  || |||||||||||||||||||| ||||||||||| || |||||    
T  34320137 gctgataagctaactgaagtgtttggtaaaattagcagttcaactagcttataaa 34320083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 1507130 - 1507187
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  1507130 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 1507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 2022718 - 2022775
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  ||||||||||||||||||||||| | ||  |||||||| ||||||||    
T  2022718 gctgataagctaattgaagtgtttggtaaaattagcggtagaactaacttataaatgt 2022775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 17047469 - 17047412
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  17047469 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 17047412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 17499275 - 17499332
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  || ||||||||||||||||| || | |||||||||||| ||||||||    
T  17499275 gctgataagctaactgaagtgtttggtaaaaatagcggttcaactaactgataaatgt 17499332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 25602697 - 25602640
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  || ||||||||||||||||| || ||||||||||| || ||||||||    
T  25602697 gctgataagctaactgaagtgtttggtaaaaatagcagttcaactagctgataaatgt 25602640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 27658727 - 27658784
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||| || ||||||||||||||| | |||||||||||| ||||||||    
T  27658727 gctgataagctaattaaaatgtttggtaaaattaacggttcaactaactgataaatgt 27658784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 33561306 - 33561363
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||| || ||||||||||||||||| || | ||||||||| || ||||||||    
T  33561306 gctgataagttaactgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 33561363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 39827330 - 39827273
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  || ||||||||||||||||| || ||||||||||| || ||||||||    
T  39827330 gctgataagctaactgaagtgtttggtaaaaataacagttcaactagctgataaatgt 39827273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 52702370 - 52702407
Alignment:
Q  67 ggctttgtttggaaaaaatagctgatagcttatagccg 104  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  52702370 ggctctgtttggtaaaaatagctgatagcttatagccg 52702407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 9769131 - 9769195
Alignment:
Q  88 ctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaa 152  Q
    |||||| |||||||| |  ||||||||||| || |||||||||  |||| |||||||||||||||    
T  9769131 ctgataacttatagctgatgactaatgactgatagctgataagctaattaaagtgtttggtaaaa 9769195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 25135725 - 25135677
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaatta 155  Q
    |||| ||||||||| |||||||||  |||| ||||||||||||||||||    
T  25135725 gactgatgacttatagctgataagctaattaaagtgtttggtaaaatta 25135677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 40934875 - 40934927
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaa 164  Q
    ||||||||| |||||||||  ||||||||||||||| ||||||| | ||||||    
T  40934875 atgacttatagctgataagctaattgaagtgtttggaaaaattagcggttcaa 40934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 5300962 - 5301056
Alignment:
Q  85 tagctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||| |||||||||||| |  |||| ||  ||||| |||||||||| | ||||||||||||||||||||| | |||||||| ||| ||||||||    
T  5300962 tagcttatagcttatagctgatgactgatagcttatagctgataagttagttgaagtgtttggtaaaattagcggttcaactgacttataaatgt 5301056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 3107269 - 3107352
Alignment:
Q  88 ctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaacta 171  Q
    ||||||||||||||| |  |||| |||| | || |||||||||  ||||||||||||||||||||||| | | |||||||||||    
T  3107269 ctgatagcttatagctgatgactgatgattgatagctgataagctaattgaagtgtttggtaaaattagcggctcaactaacta 3107352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 22756985 - 22756932
Alignment:
Q  123 ctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    ||||||||  |||| |||||||||||||||||| | ||||||||||||||||||    
T  22756985 ctgataagctaattaaagtgtttggtaaaattagcggttcaactaactaataaa 22756932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 559074 - 559017
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  559074 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 559017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 34440443 - 34440378
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    ||||||||| |||||||||  | |||||||||||||||| |||| | |||||||| ||| ||||||    
T  34440443 atgacttatagctgataagctagttgaagtgtttggtaatattagcggttcaactgacttataaat 34440378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 18531692 - 18531745
Alignment:
Q  124 tgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| | ||||||    
T  18531692 tgataagttaattgaagtgtttggtaaaattagcagttcaactaattgataaat 18531745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 31523224 - 31523170
Alignment:
Q  125 gataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||||||||||||||| ||||||||| | ||||||||| || ||||||||    
T  31523224 gataagtcaattgaagtgtttagtaaaattaacggttcaactagctgataaatgt 31523170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 2731272 - 2731339
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||| || |||||||||| ||||||| |||||  |||||||| |  ||||||||||||||||||||    
T  2731272 atgactaatagctgataagttaattgaactgttttataaaattagcgtttcaactaactaataaatgt 2731339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 14172414 - 14172376
Alignment:
Q  141 tgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  14172414 tgtttggtaaaattagcagttcaattaactaataaatgt 14172376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 40046335 - 40046269
Alignment:
Q  89 tgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaatta 155  Q
    |||||||||||||| |  |||  |||||| || |||||||||  |||||||||||||||||||||||    
T  40046335 tgatagcttatagctgatgacagatgactaatagctgataagctaattgaagtgtttggtaaaatta 40046269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 37296120 - 37296071
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagtt 161  Q
    |||||| ||| ||||||||| ||||||| ||||||||||||||| |||||    
T  37296120 atgactaatgactgataagttaattgaaatgtttggtaaaattaacagtt 37296071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 44826803 - 44826860
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  44826803 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 44826860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 3427130 - 3427174
Alignment:
Q  135 ttgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||||||||||||||| | |||||||| ||| ||||||||    
T  3427130 ttgaagtgtttggtaaaattagcggttcaactgacttataaatgt 3427174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 38782584 - 38782516
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaatt-accagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||    |||||||||||||||||||| | | |||||||||||| ||||||||    
T  38782584 atgacttatagctgataagctggttgaagtgtttggtaaaattaaacggttcaactaacttataaatgt 38782516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 39678110 - 39678058
Alignment:
Q  124 tgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaa 176  Q
    |||||||  |||| ||||||||| |||||||| |||||||||||| |||||||    
T  39678110 tgataagctaattaaagtgtttgataaaattagcagttcaactaaataataaa 39678058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 45152770 - 45152714
Alignment:
Q  123 ctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||  || |||||||||||||||||||| | ||||||||| || ||||||||    
T  45152770 ctgataagctaaatgaagtgtttggtaaaattaacggttcaactagctgataaatgt 45152714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 72149 - 72216
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  ||||||||  ||||||||||||||||||||||| | |||||| ||||| ||||||||    
T  72149 atgacttataactgataagctaattgaagtgtttggtaaaattaacggttcaattaactgataaatgt 72216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 85032 - 84969
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataa 175  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| | |||||| ||||| ||||    
T  85032 atgacttatagctgataagctaattgaagtgtttggtaaaattagcggttcaattaactgataa 84969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 40894135 - 40894068
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  ||||||||  ||||||||||||||||||||||| | |||||| ||||| ||||||||    
T  40894135 atgacttataactgataagctaattgaagtgtttggtaaaattaacggttcaattaactgataaatgt 40894068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 17845306 - 17845243
Alignment:
Q  116 cttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||| ||| |||||  ||||||||||||||||||||||| | |||||||| ||| ||||||||    
T  17845306 cttatagcttataagctaattgaagtgtttggtaaaattagcggttcaactgacttataaatgt 17845243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 23030583 - 23030516
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||| |||| |||||||||  | ||||||||||||||||||||| | |||||||| ||| ||||||||    
T  23030583 atgatttatagctgataagctagttgaagtgtttggtaaaattaacggttcaactgacttataaatgt 23030516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 35001639 - 35001572
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||| || |||||||||  |||| ||||||||| |||||||| | |||||||||||| ||||||||    
T  35001639 atgactaatagctgataagctaattaaagtgtttgttaaaattagcggttcaactaactgataaatgt 35001572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 9488131 - 9488074
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  9488131 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 9488074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 24171585 - 24171492
Alignment:
Q  84 atagctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    |||||| |||||||||||| |  | || || ||| || |||||||||  |||||||||||||||||||||||   ||||||||| || ||||||    
T  24171585 atagcttatagcttatagctgatggctgataactgatagctgataagctaattgaagtgtttggtaaaattagtggttcaactagctgataaat 24171492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 31512016 - 31511959
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||| || ||||||||||| ||||| || | ||||||||| |||||||||||    
T  31512016 gctgataagttaactgaagtgtttgataaaaatagcggttcaactagctaataaatgt 31511959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 19756691 - 19756759
Alignment:
Q  84 atagctgatagcttatagccggagactaatgacttatggctgataagtcaattgaagtgtttggtaaaa 152  Q
    ||||||||||||||||||| |  |||| || ||| || |||||||||  ||||||| ||||||||||||    
T  19756691 atagctgatagcttatagctgatgactgataactgatagctgataagctaattgaactgtttggtaaaa 19756759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 27867068 - 27867140
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||| ||||||||| ||| |||||| |||| ||  || ||||||||||| | |||||||||||| ||||||||    
T  27867068 gacttatgacttatagcttataagttaattaaaccgtatggtaaaattagcggttcaactaactgataaatgt 27867140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 2812667 - 2812738
Alignment:
Q  108 actaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||| |||||||| | |||||||  |||| |||||||||||||||||| | ||||||||| |||||||||||    
T  2812667 actagtgacttatagttgataagataattaaagtgtttggtaaaattagcggttcaactacctaataaatgt 2812738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 32025642 - 32025709
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| |||||||||  | |||||||||||||||||||||   |||||||||||| ||||||||    
T  32025642 atgacttatagctgataagctagttgaagtgtttggtaaaattagtggttcaactaacttataaatgt 32025709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 44748245 - 44748302
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||| |||||||||||||||||||| || | ||||| |||||| ||||||||    
T  44748245 gctgataagttaattgaagtgtttggtaaaaatagcggttcatctaactgataaatgt 44748302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 20451194 - 20451127
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||| || |||||||||  |||| |||||||||||||||||| | ||||||||| || ||||||||    
T  20451194 atgactgatagctgataagctaattaaagtgtttggtaaaattagcggttcaactagctgataaatgt 20451127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 42218364 - 42218297
Alignment:
Q  112 atgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||| || ||| |||||| ||||||||||||||||||||||| | ||| ||||| || ||||||||    
T  42218364 atgactaatagcttataagttaattgaagtgtttggtaaaattagcggttgaactagctgataaatgt 42218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 52594729 - 52594799
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    |||||||  ||||| |||||||||  | ||||||||||||||||||||| | |||||||| ||| ||||||    
T  52594729 gactaatagcttatagctgataagctagttgaagtgtttggtaaaattaacggttcaactgacttataaat 52594799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 35500342 - 35500285
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  |||||||||||||||||||| || | ||||||||| || ||||||||    
T  35500342 gctgataagctaattgaagtgtttggtaaaaatagcggttcaactagctgataaatgt 35500285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 44846357 - 44846300
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||||  || ||||||||||||||||| || | |||||||||||| ||||||||    
T  44846357 gctgataagctaactgaagtgtttggtaaaaatagcggttcaactaactgataaatgt 44846300  T

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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 40479446 - 40479502
Alignment:
Q  123 ctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    ||||||||| || |||||||||| |||||| || ||||||||||| || ||||||||    
T  40479446 ctgataagttaactgaagtgtttagtaaaaatagcagttcaactagctgataaatgt 40479502  T

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Target: scaffold0173 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 22301 - 22356
Alignment:
Q  124 tgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaatgt 179  Q
    |||||||  |||||||||||||||||||| || | ||||||||| |||||||||||    
T  22301 tgataagctaattgaagtgtttggtaaaaataacggttcaactagctaataaatgt 22356  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 129596 - 129651
Alignment:
Q  122 gctgataagtcaattgaagtgtttggtaaaattaccagttcaactaactaataaat 177  Q
    |||||||||  || ||||||||||||||||| || |||||||||||||| ||||||    
T  129596 gctgataagctaactgaagtgtttggtaaaaatagcagttcaactaactgataaat 129651  T

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Target: scaffold0343 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 10010 - 9962
Alignment:
Q  107 gactaatgacttatggctgataagtcaattgaagtgtttggtaaaatta 155  Q
    |||| ||||||||| ||| |||||  |||||||||||||||||||||||    
T  10010 gactgatgacttatagctaataagctaattgaagtgtttggtaaaatta 9962  T

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