View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14526_low_1 (Length: 493)
Name: NF14526_low_1
Description: NF14526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14526_low_1 |
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Alignment Details
Target: chr1 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 18 - 483
Target Start/End: Original strand, 7266416 - 7266881
Alignment:
| Q |
18 |
cacgaagcagtcgtggaagtgaagtcgaagaagagaagctgctattctgatatccttagcaatggccttctccaagactgacatgacaatgtcattagct |
117 |
Q |
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| T |
7266416 |
cacgaagcagtcgtggaagtgaagtcgaagaagagaagctgctattctgatatccttagcaatggccttctccaagactgacatgacaatgtcattagct |
7266515 |
T |
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| Q |
118 |
tgagggcatgaaaactgatagaattgaggagaaagtccaaaagacattcctctagtggttccaccatgatgaccaccccagccgaagtggaaatcatgga |
217 |
Q |
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| T |
7266516 |
tgagggcatgaaaactgatagaattgaggagaaagtccaaaagacattcctctagtggttccaccatgatgaccaccccagccaaagtggaaatcatgga |
7266615 |
T |
|
| Q |
218 |
caggatgagcatgggagagtgtaactgagagaaaagctgctacaagaagaatgactttggtgaaagacattgtgacaagtgactgcaaagaggcttgtct |
317 |
Q |
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| T |
7266616 |
caggatgagcatgggagagtgtaactgagagaaaagctgctacaagaagaatgactttggtgaaagacattgtgacaagtgactgcaaagaggcttgtct |
7266715 |
T |
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| Q |
318 |
gatgattattaatattgttgtgtggcatattggattggattgtttggtatatataatgctaaaggatcaaaccactcactactatcttcaacaaattaat |
417 |
Q |
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| T |
7266716 |
gatgattattaatattgttgtgtggcatattggattggattgtttggtatatataatgctaaaggatcaaaccactcactactatcttcaacaaattaat |
7266815 |
T |
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| Q |
418 |
cacctaatgtttgcaagtagtaaacttatgactttatcaacatgttctgtcctagccccacctatg |
483 |
Q |
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| T |
7266816 |
cacctaatgtatgcaagtagtaaacttatgactttatcaacatgttctgtcctagccccacctatg |
7266881 |
T |
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