View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14526_low_14 (Length: 235)
Name: NF14526_low_14
Description: NF14526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14526_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 247976 - 247759
Alignment:
| Q |
5 |
gaataatatatatttttcgtttaaaacatactataaaatttataaataggaacgaagaagcaacatttagtactcctcaccccctaannnnnnnnn-cca |
103 |
Q |
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| T |
247976 |
gaataatatat-tttttcgtttaaaacatactataaaatttataaataggaacgaagaagcaacatttagtactcctcaccccctaattttttttttcca |
247878 |
T |
|
| Q |
104 |
gtactcttccaatcttatattatatagtttgtgatatgcacacttcatgagaaaaaatgatcaccaccttcaaaatacaaagaaaatgatttacttatac |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
247877 |
gtactcttccaatcttatattatatagtttgtgatatgcacacttcatgagaaaaaatgatcaccaccttcaaaatacaaagaaaatgatttacttatac |
247778 |
T |
|
| Q |
204 |
caattttcaatgtaaaata |
222 |
Q |
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||||||||||||||||||| |
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| T |
247777 |
caattttcaatgtaaaata |
247759 |
T |
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