View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14526_low_5 (Length: 370)

Name: NF14526_low_5
Description: NF14526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14526_low_5
NF14526_low_5
[»] chr7 (47 HSPs)
chr7 (1-355)||(27242815-27243174)
chr7 (1-74)||(27281690-27281763)
chr7 (1-74)||(27296158-27296231)
chr7 (1-74)||(27220228-27220301)
chr7 (1-74)||(27249070-27249143)
chr7 (1-74)||(27271579-27271652)
chr7 (1-74)||(27304390-27304463)
chr7 (1-74)||(27157998-27158071)
chr7 (228-348)||(39498569-39498689)
chr7 (1-74)||(27147134-27147207)
chr7 (1-74)||(27165538-27165611)
chr7 (2-67)||(27246136-27246201)
chr7 (1-74)||(27301530-27301606)
chr7 (278-348)||(31581535-31581605)
chr7 (2-67)||(27227859-27227924)
chr7 (279-348)||(34963903-34963972)
chr7 (170-225)||(27271383-27271438)
chr7 (278-355)||(1102028-1102104)
chr7 (287-348)||(9602815-9602876)
chr7 (287-348)||(9830386-9830447)
chr7 (2-67)||(27235953-27236018)
chr7 (287-348)||(37264267-37264328)
chr7 (287-348)||(40023819-40023879)
chr7 (1-71)||(27134088-27134158)
chr7 (287-348)||(5068390-5068451)
chr7 (291-348)||(8149917-8149974)
chr7 (279-348)||(11616507-11616576)
chr7 (279-348)||(12308325-12308393)
chr7 (3-64)||(27312620-27312681)
chr7 (287-348)||(30659572-30659633)
chr7 (279-348)||(40590917-40590986)
chr7 (279-348)||(46288523-46288592)
chr7 (173-209)||(27296001-27296037)
chr7 (292-348)||(39343763-39343819)
chr7 (292-355)||(1099171-1099233)
chr7 (120-167)||(27281578-27281625)
chr7 (293-355)||(17265987-17266049)
chr7 (274-328)||(21387718-21387772)
chr7 (1-67)||(27322896-27322962)
chr7 (279-348)||(2846768-2846837)
chr7 (295-348)||(3781270-3781323)
chr7 (266-319)||(26296269-26296322)
chr7 (279-348)||(38181966-38182035)
chr7 (279-348)||(39693737-39693806)
chr7 (279-348)||(46095540-46095609)
chr7 (273-341)||(5083573-5083641)
chr7 (312-348)||(14649011-14649047)
[»] chr1 (43 HSPs)
chr1 (1-115)||(14889941-14890055)
chr1 (1-67)||(14884290-14884356)
chr1 (273-355)||(34877176-34877257)
chr1 (167-224)||(14890128-14890185)
chr1 (279-348)||(35705258-35705327)
chr1 (273-348)||(16040017-16040092)
chr1 (278-348)||(3718942-3719011)
chr1 (273-355)||(36784254-36784336)
chr1 (287-348)||(24131493-24131554)
chr1 (273-346)||(52830508-52830581)
chr1 (277-337)||(37643390-37643450)
chr1 (292-355)||(30903313-30903376)
chr1 (293-348)||(31798378-31798433)
chr1 (278-348)||(11425962-11426032)
chr1 (278-348)||(27698757-27698827)
chr1 (278-348)||(28277131-28277201)
chr1 (279-348)||(4466247-4466316)
chr1 (279-348)||(17342774-17342843)
chr1 (292-348)||(27831804-27831861)
chr1 (287-348)||(29225707-29225768)
chr1 (266-355)||(44657278-44657367)
chr1 (279-348)||(46536286-46536355)
chr1 (279-355)||(43895793-43895869)
chr1 (280-348)||(48242683-48242751)
chr1 (292-348)||(50333894-50333950)
chr1 (293-348)||(705442-705497)
chr1 (293-348)||(2886131-2886186)
chr1 (293-348)||(16956344-16956398)
chr1 (277-348)||(49944735-49944805)
chr1 (130-172)||(14884406-14884448)
chr1 (266-348)||(26583661-26583743)
chr1 (287-348)||(1859461-1859521)
chr1 (291-348)||(5115918-5115975)
chr1 (287-348)||(12267724-12267785)
chr1 (287-348)||(16451585-16451646)
chr1 (287-348)||(16460738-16460799)
chr1 (287-348)||(18186299-18186359)
chr1 (279-348)||(19533012-19533081)
chr1 (291-348)||(26760115-26760172)
chr1 (291-348)||(26924362-26924419)
chr1 (287-348)||(44580470-44580531)
chr1 (312-348)||(10587674-10587710)
chr1 (131-167)||(14890072-14890108)
[»] chr6 (12 HSPs)
chr6 (222-347)||(6787185-6787309)
chr6 (278-348)||(3604692-3604762)
chr6 (278-348)||(30064041-30064111)
chr6 (291-348)||(15321317-15321374)
chr6 (228-355)||(31723390-31723516)
chr6 (278-328)||(34703565-34703615)
chr6 (287-348)||(9354535-9354596)
chr6 (279-348)||(15081369-15081438)
chr6 (287-348)||(33921561-33921622)
chr6 (292-348)||(3166200-3166256)
chr6 (292-348)||(8232402-8232458)
chr6 (292-348)||(15325106-15325162)
[»] chr4 (38 HSPs)
chr4 (278-355)||(1825333-1825410)
chr4 (278-348)||(29136881-29136951)
chr4 (278-348)||(41436426-41436496)
chr4 (277-348)||(49448783-49448856)
chr4 (279-348)||(18849851-18849920)
chr4 (287-348)||(38319865-38319926)
chr4 (278-348)||(40021040-40021111)
chr4 (266-348)||(47846831-47846914)
chr4 (266-321)||(52677404-52677459)
chr4 (279-345)||(8294977-8295043)
chr4 (298-348)||(22872480-22872530)
chr4 (266-348)||(39979713-39979795)
chr4 (275-348)||(25581392-25581464)
chr4 (287-348)||(28279791-28279852)
chr4 (287-348)||(29550819-29550880)
chr4 (278-339)||(42738433-42738494)
chr4 (279-348)||(48740466-48740535)
chr4 (279-348)||(49812175-49812244)
chr4 (287-348)||(53848286-53848347)
chr4 (279-348)||(54729575-54729644)
chr4 (292-348)||(11469816-11469872)
chr4 (292-348)||(11521589-11521645)
chr4 (292-348)||(25287282-25287338)
chr4 (292-348)||(37316014-37316070)
chr4 (283-355)||(51527369-51527441)
chr4 (293-348)||(17237003-17237058)
chr4 (278-308)||(22872551-22872581)
chr4 (287-348)||(44633110-44633172)
chr4 (278-348)||(51572320-51572389)
chr4 (266-348)||(54217275-54217357)
chr4 (295-348)||(22129163-22129216)
chr4 (279-348)||(42185888-42185957)
chr4 (267-348)||(43335115-43335196)
chr4 (287-355)||(2906639-2906706)
chr4 (272-348)||(19688255-19688330)
chr4 (278-346)||(30568553-30568620)
chr4 (279-327)||(33047444-33047492)
chr4 (291-348)||(55360440-55360499)
[»] chr2 (28 HSPs)
chr2 (280-347)||(14136711-14136778)
chr2 (241-344)||(31546114-31546216)
chr2 (278-348)||(28526909-28526979)
chr2 (278-348)||(43950531-43950600)
chr2 (235-348)||(10069677-10069790)
chr2 (278-348)||(18181305-18181376)
chr2 (279-348)||(45464309-45464376)
chr2 (295-348)||(5007634-5007687)
chr2 (272-341)||(11842474-11842543)
chr2 (279-344)||(734107-734174)
chr2 (277-348)||(7650067-7650138)
chr2 (273-348)||(41436019-41436094)
chr2 (279-348)||(3100346-3100415)
chr2 (273-346)||(8385016-8385088)
chr2 (287-355)||(31592505-31592572)
chr2 (293-348)||(32556125-32556181)
chr2 (274-345)||(44194593-44194663)
chr2 (288-326)||(883263-883301)
chr2 (287-348)||(7931588-7931649)
chr2 (282-347)||(15859435-15859500)
chr2 (287-348)||(24356065-24356126)
chr2 (278-327)||(27001524-27001573)
chr2 (279-348)||(33751407-33751476)
chr2 (275-348)||(37028700-37028773)
chr2 (279-328)||(42881389-42881438)
chr2 (284-348)||(5425808-5425872)
chr2 (300-348)||(8550734-8550781)
chr2 (292-348)||(36748101-36748157)
[»] chr5 (25 HSPs)
chr5 (277-348)||(16884024-16884097)
chr5 (258-348)||(33498589-33498679)
chr5 (279-348)||(5357910-5357979)
chr5 (287-352)||(6629482-6629547)
chr5 (279-348)||(30437834-30437903)
chr5 (264-336)||(13597960-13598032)
chr5 (291-347)||(39035949-39036005)
chr5 (273-348)||(25814304-25814379)
chr5 (266-348)||(31956662-31956745)
chr5 (293-348)||(42818864-42818919)
chr5 (278-348)||(4412328-4412398)
chr5 (293-347)||(8941213-8941266)
chr5 (279-348)||(15814609-15814676)
chr5 (279-348)||(14259613-14259682)
chr5 (279-355)||(13716956-13717032)
chr5 (264-327)||(9426667-9426730)
chr5 (279-348)||(4475191-4475261)
chr5 (278-348)||(13422445-13422514)
chr5 (266-348)||(15898125-15898206)
chr5 (282-348)||(35646182-35646248)
chr5 (278-348)||(39008074-39008144)
chr5 (279-348)||(11099570-11099639)
chr5 (279-348)||(33012300-33012369)
chr5 (279-348)||(41184063-41184132)
chr5 (292-348)||(4194599-4194655)
[»] chr8 (30 HSPs)
chr8 (279-348)||(39171489-39171558)
chr8 (279-348)||(42412475-42412544)
chr8 (291-355)||(13085036-13085100)
chr8 (224-348)||(7755151-7755277)
chr8 (266-348)||(12958274-12958355)
chr8 (287-348)||(32231812-32231873)
chr8 (279-346)||(33191003-33191070)
chr8 (287-333)||(27571449-27571495)
chr8 (287-348)||(886540-886601)
chr8 (287-348)||(14689914-14689975)
chr8 (287-348)||(25174677-25174738)
chr8 (287-348)||(28791262-28791323)
chr8 (292-348)||(32678994-32679050)
chr8 (288-348)||(41726476-41726536)
chr8 (292-348)||(45421032-45421088)
chr8 (273-348)||(2349290-2349365)
chr8 (266-348)||(8418394-8418478)
chr8 (287-348)||(2796993-2797055)
chr8 (278-348)||(3442429-3442498)
chr8 (273-355)||(4274384-4274466)
chr8 (279-348)||(5391994-5392064)
chr8 (278-348)||(7258459-7258527)
chr8 (278-348)||(32241516-32241586)
chr8 (287-348)||(2195422-2195483)
chr8 (287-348)||(29638255-29638316)
chr8 (287-349)||(43844973-43845037)
chr8 (278-355)||(44615450-44615527)
chr8 (312-348)||(8839744-8839780)
chr8 (277-321)||(26570278-26570322)
chr8 (292-348)||(36012064-36012120)
[»] chr3 (28 HSPs)
chr3 (278-348)||(2868519-2868589)
chr3 (278-348)||(27668419-27668488)
chr3 (275-348)||(3862264-3862336)
chr3 (280-348)||(21296595-21296663)
chr3 (296-348)||(44219125-44219177)
chr3 (292-348)||(53050985-53051041)
chr3 (294-348)||(8706109-8706163)
chr3 (294-348)||(9057996-9058050)
chr3 (293-347)||(31650876-31650930)
chr3 (287-348)||(7885663-7885723)
chr3 (279-348)||(21585502-21585571)
chr3 (287-348)||(30261594-30261655)
chr3 (279-348)||(41031518-41031587)
chr3 (287-348)||(46194298-46194359)
chr3 (279-344)||(51636985-51637050)
chr3 (278-348)||(32023193-32023263)
chr3 (279-329)||(43640676-43640726)
chr3 (279-348)||(16276398-16276465)
chr3 (279-348)||(24619004-24619073)
chr3 (283-348)||(32977882-32977947)
chr3 (279-348)||(33994603-33994672)
chr3 (287-348)||(39329842-39329903)
chr3 (287-348)||(48409538-48409599)
chr3 (279-348)||(48744171-48744240)
chr3 (287-348)||(50736055-50736116)
chr3 (287-348)||(50776739-50776800)
chr3 (282-342)||(26142855-26142915)
chr3 (272-348)||(38600898-38600973)
[»] scaffold0578 (1 HSPs)
scaffold0578 (295-348)||(3991-4044)
[»] scaffold0007 (2 HSPs)
scaffold0007 (279-348)||(230203-230271)
scaffold0007 (287-348)||(157981-158042)
[»] scaffold0067 (1 HSPs)
scaffold0067 (291-355)||(1845-1909)


Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 27243174 - 27242815
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaatgcaattctagtgtgttagtgagtgta 100  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  27243174 aatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaagcattgaactagccatgatttggaaatgcaattctagtttgttagtgagcgta 27243075  T
Q  101 gattggtgaat-----tgttatgactaattaattgctatctatagagaatagacgacaactcaacttccaatgtaaggagtgttttatccacgatcaata 195  Q
    | |||||||||     ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27243074 ggttggtgaatggatgtgttatgactaattaattgttatttatagagaatagacgacaactcaacttccaatgtaaggagtgttttacccacgatcaata 27242975  T
Q  196 tctcaagagtaaactatcatcaaaataaaatatactctctccgttccattataagtgagtattttattataaaattttgttttaaaataactgactcatt 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |||    
T  27242974 tctcaagagtaaactatcatcaaaataaaatatactctctccgtcccattataaataagtattttattataaaattttgttttaaaataactgacttatt 27242875  T
Q  296 tcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27242874 tcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 27242815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27281763 - 27281690
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  27281763 aatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 27281690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27296231 - 27296158
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  27296231 aatgcccaaaaccaagcatatcgtagccaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 27296158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27220301 - 27220228
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    ||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||    
T  27220301 aatgcccaaaaccaagcatatcatagccaaacaagtaaccttcaaaagcattgaactagccatgatttggaaat 27220228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27249143 - 27249070
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    |||||||||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  27249143 aatgcccaaaactaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaat 27249070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27271652 - 27271579
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    ||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  27271652 aatgctcaaaaccaagcatatcatagccaaacaagtaaccttgacaaggattgaactagccatgatttggaaat 27271579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27304463 - 27304390
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    ||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  27304463 aatgcccaaaaccaagcatatcatagccaagcaagtaactttgacaagcattgaactagccatgatttggaaat 27304390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27158071 - 27157998
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    |||| ||||||||||||| ||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||    
T  27158071 aatggccaaaaccaagcacatcacagacaaacaagtaaccttaataagcattgagctagccatgatttggaaat 27157998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 228 - 348
Target Start/End: Original strand, 39498569 - 39498689
Alignment:
Q  228 tactctctccgttccattataagtgagtattttattataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattaccttttt 327  Q
    ||||| ||||||||||| |||| ||||  |||| | | ||||| ||||  |||||||||||||  ||||| |||||||||| | |||||||||| |||||    
T  39498569 tactccctccgttccataataactgagccttttgtaaaaaaatattgtcataaaataactgacctatttctcttttcaatgcaatattaattactttttt 39498668  T
Q  328 ctaattataactctaattaat 348  Q
    |||||||||| ||||||||||    
T  39498669 ctaattataattctaattaat 39498689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27147207 - 27147134
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    |||| |||||| |||||| ||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||    
T  27147207 aatggccaaaagcaagcacatcacagacaaacaagtaaccttaataagcattgagctagccatgatttggaaat 27147134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27165611 - 27165538
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 74  Q
    |||| ||||||||||||||||||||| ||||||||| | ||| |||||||||||  ||||||||||||||||||    
T  27165611 aatggccaaaaccaagcatatcacagacaaacaagtgatcttaacaagcattgaggtagccatgatttggaaat 27165538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 27246201 - 27246136
Alignment:
Q  2 atgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatt 67  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||    
T  27246201 atgcccagaaccaagcatatcacagtcaagcaagtaaccttgacaaacattgaggtagccatgatt 27246136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27301606 - 27301530
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttga---caagcattgaactagccatgatttggaaat 74  Q
    ||||| ||||||||||||||||| || ||| |||||||| ||||   ||||||||||||||||||||||||||||||    
T  27301606 aatgcacaaaaccaagcatatcatagccaagcaagtaactttgatcacaagcattgaactagccatgatttggaaat 27301530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 31581605 - 31581535
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||||||||||||||||  | |||||||||| |||||| | |||||||||||||||||    
T  31581605 taaaataactgagtcatttcacttttcaatacaatattaattacttttttccatttataactctaattaat 31581535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 27227924 - 27227859
Alignment:
Q  2 atgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatt 67  Q
    ||||||| ||||||||||||||||||||| || ||||||||||||| ||||||  |||||||||||    
T  27227924 atgcccagaaccaagcatatcacagtcaagcatgtaaccttgacaaacattgaggtagccatgatt 27227859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 34963972 - 34963903
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  |||||||||||| ||||||   |||||||||||||||||    
T  34963972 aaaataactgagtcatttcacttttcaatacagtattaattacttttttccctttataactctaattaat 34963903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 27271438 - 27271383
Alignment:
Q  170 aaggagtgttttatccacgatcaatatctcaagagtaaactatcatcaaaataaaa 225  Q
    |||| |||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  27271438 aaggtgtgttttacccaagatcaatatctcaagagtaaacaatcatcaaaataaaa 27271383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 1102104 - 1102028
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||| || ||||||||||||||||| |||||| |||||||||  ||||||||||||||| | |||||||| ||||||    
T  1102104 taaaaaaattgactcatttcactttttaatgtaatattaatta-ttttttctaattataattttaattaatattattt 1102028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 9602815 - 9602876
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| ||||||||| |||||| | |||||||||| |||||||||||||||| |||||||||    
T  9602815 tgacttatttcacttctcaatgcaatattaattacttttttctaattataacactaattaat 9602876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 9830386 - 9830447
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| ||||||||| |||||| | |||||||||| |||||||||||||||| |||||||||    
T  9830386 tgacttatttcacttctcaatgcaatattaattacttttttctaattataacactaattaat 9830447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 27236018 - 27235953
Alignment:
Q  2 atgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatt 67  Q
    ||||||| |||||||||||||||| ||||  ||||||||||||||| ||||||  |||||||||||    
T  27236018 atgcccagaaccaagcatatcacaatcaagaaagtaaccttgacaaacattgaggtagccatgatt 27235953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 37264267 - 37264328
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  | |||||||||| |||| |||||||||||||||||||||    
T  37264267 tgacccatttcacttttcaatacaatattaattactttttcctaattataactctaattaat 37264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 40023879 - 40023819
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | ||||||||| |||||| ||||||||||||||||||||    
T  40023879 tgactcatttcacttttcaatacaatattaatta-ctttttttaattataactctaattaat 40023819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27134158 - 27134088
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttgga 71  Q
    |||| ||||||||||||||| || || || |||||||| ||| ||||||||||| ||||||||| ||||||    
T  27134158 aatgaccaaaaccaagcatagcatagacatacaagtaatcttaacaagcattgagctagccatggtttgga 27134088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 5068451 - 5068390
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||| |||  | || ||||||| |||||| |||||||||||||||||||    
T  5068451 tgactcatttcactttttaatacaatactaattacttttttccaattataactctaattaat 5068390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 8149917 - 8149974
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| ||||||||  | |||||||||| |||||| |||||||||||||||||||    
T  8149917 tcatttcatttttcaatacaatattaattacttttttccaattataactctaattaat 8149974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 11616507 - 11616576
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||  ||||||||||||||||  | |||||||||| ||||||   |||||||||||||||||    
T  11616507 aaaataactgagccatttcacttttcaatacaatattaattacttttttccctttataactctaattaat 11616576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 12308325 - 12308393
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||| ||||||||  | |||||||||| |||||| | |||||||||||||||||    
T  12308325 aaaataactgagtcatttcaattttcaatacaatattaattacttttttc-atttataactctaattaat 12308393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 27312681 - 27312620
Alignment:
Q  3 tgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatg 64  Q
    ||||||||||||||||||||| || |||  |||||| |||||||| |||||| |||||||||    
T  27312681 tgcccaaaaccaagcatatcatagccaagaaagtaatcttgacaaacattgagctagccatg 27312620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 30659633 - 30659572
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  ||||||||| |||||| |||||||||||||||||||    
T  30659633 tgacccatttcacttttcaatacaacattaattacttttttccaattataactctaattaat 30659572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 40590986 - 40590917
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| ||||||||||||| |||  | |||||||||| ||||||   |||||||||||||||||    
T  40590986 aaaataactgagtcatttcacttttaaatacaatattaattacttttttccttttataactctaattaat 40590917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 46288592 - 46288523
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||  |||||||||||||||| || |||||||||  ||||||   |||||||||||||||||    
T  46288592 aaaataactgagccatttcacttttcaatataatattaattaattttttccctttataactctaattaat 46288523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 27296037 - 27296001
Alignment:
Q  173 gagtgttttatccacgatcaatatctcaagagtaaac 209  Q
    |||||||||| ||||||||||||||||||||||||||    
T  27296037 gagtgttttacccacgatcaatatctcaagagtaaac 27296001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 39343819 - 39343763
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||  | ||||||||||| ||||  |||||||||||||||||||    
T  39343819 catttcacttttcaatacaatattaattaccctttttcaattataactctaattaat 39343763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 1099233 - 1099171
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||||||||||||||| | |||||||  |||||| |||||||||| |||||||| ||||||    
T  1099233 catttcacttttcaatgtaatcttaattatttttttc-aattataactttaattaatattattt 1099171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 27281625 - 27281578
Alignment:
Q  120 ctaattaattgctatctatagagaatagacgacaactcaacttccaat 167  Q
    ||||||||| ||||| ||||||||||||| ||||||||| ||||||||    
T  27281625 ctaattaatggctatttatagagaatagatgacaactcagcttccaat 27281578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 17265987 - 17266049
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||||||||||| ||  ||||||||| |||||| || |||| ||||||||||| ||||||    
T  17265987 atttcacttttcaatataacattaattacttttttccaaatatatctctaattaatattattt 17266049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 21387772 - 21387718
Alignment:
Q  274 gttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttc 328  Q
    ||||||||||| || | ||||||||||||||||| || |||||||||| ||||||    
T  21387772 gttttaaaatagctaagtcatttcacttttcaatataatattaattacttttttc 21387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27322962 - 27322896
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatt 67  Q
    |||||| ||||||||||||||||| |  || |||||||||||||  |||||||| || |||||||||    
T  27322962 aatgccaaaaaccaagcatatcactgctaagcaagtaaccttgaagagcattgagctggccatgatt 27322896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 2846837 - 2846768
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||| |||||||||||||||||  |  ||||||||| ||||||   |||||||||||||||||    
T  2846837 aaaataagtgagtcatttcacttttcaatacatcattaattacttttttccttttataactctaattaat 2846768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 3781323 - 3781270
Alignment:
Q  295 ttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||| | |||||||||| || ||  |||||||||||||||||||    
T  3781323 ttcacttttcaatgcaatattaattactttgtttcaattataactctaattaat 3781270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 26296322 - 26296269
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaatt 319  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||| | ||||||||    
T  26296322 aaaatattgttttagaataactaactcattttacttttcaatgcaatattaatt 26296269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 38182035 - 38181966
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||| ||||||||||  | |||||||||  | |||||  |||||||||||||||||    
T  38182035 aaaataactgagtcattttacttttcaataaaatattaattatttctttctctttataactctaattaat 38181966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 39693737 - 39693806
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||| |||||||||||||||||  |  ||||||||| ||||||   |||||||||||||||||    
T  39693737 aaaataagtgagtcatttcacttttcaatacatcattaattacttttttccctttataactctaattaat 39693806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 46095609 - 46095540
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| || |||||||||||||||||  | |||||||||  ||||||   |||||||||||||||||    
T  46095609 aaaataaccgagtcatttcacttttcaatacaatattaattaattttttcattttataactctaattaat 46095540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 5083641 - 5083573
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactct 341  Q
    ||||| ||||||| ||| ||||||||||||||||| || |||||||||  ||||||   ||||||||||    
T  5083641 tgtttcaaaataagtgagtcatttcacttttcaatataatattaattatttttttccttttataactct 5083573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 14649047 - 14649011
Alignment:
Q  312 tattaattacctttttctaattataactctaattaat 348  Q
    |||||||||| |||||| |||||||||||||||||||    
T  14649047 tattaattacttttttccaattataactctaattaat 14649011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14889941 - 14890055
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatttggaaatgcaattctagtgtgttagtgagtgta 100  Q
    ||||| ||||||||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14889941 aatgctcaaaaccaagcatatcatagccaaacaagtaaccttggtaagcattgaactagccatgatttggaaatgcaattctagtgtgttagtgagtgta 14890040  T
Q  101 gattggtgaattgtt 115  Q
    |||||||||||||||    
T  14890041 gattggtgaattgtt 14890055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14884290 - 14884356
Alignment:
Q  1 aatgcccaaaaccaagcatatcacagtcaaacaagtaaccttgacaagcattgaactagccatgatt 67  Q
    |||||||||||||||||||| || || ||||||||||||||||  ||||||||||||||||||||||    
T  14884290 aatgcccaaaaccaagcataacatagccaaacaagtaaccttggtaagcattgaactagccatgatt 14884356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 34877257 - 34877176
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    |||| |||||||||||| |||||| ||||||||||  | |||||||||| ||||||| |||||||||||||||||| ||||||    
T  34877257 tgttctaaaataactgaatcattttacttttcaatacaatattaattac-tttttctcattataactctaattaatattattt 34877176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 14890128 - 14890185
Alignment:
Q  167 tgtaaggagtgttttatccacgatcaatatctcaagagtaaactatcatcaaaataaa 224  Q
    |||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||||    
T  14890128 tgtaaggagtattttatccacaatcagtatctcaagagtaaacgatcatcaaaataaa 14890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 35705327 - 35705258
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||||| |||||| ||||||||| | | |||||||| ||||||||||||||||||||||||||    
T  35705327 aaaataattgacttatttcatttttcaatgcaatgttaattacttttttctaattataactctaattaat 35705258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 16040017 - 16040092
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||| |||||||||||| ||||  | |||||||||| |||||  |||||||||||||| ||||    
T  16040017 tgttttaaaataactgagtcatttcactttccaatacaatattaattactttttttcaattataactctaaataat 16040092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 3719011 - 3718942
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| |||||||||||||||||||||| | |||||||||  |||||| || ||||||||||||||||    
T  3719011 taaaataagtgactcatttcacttttcaatgcaatattaatta-ttttttccaactataactctaattaat 3718942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 355
Target Start/End: Original strand, 36784254 - 36784336
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||| ||||||||||| |||||||||||||||||  | |||||||||| |||||  | |||||||| |||||||| ||||||    
T  36784254 tgtttcaaaataactgagtcatttcacttttcaatacaatattaattactttttttcatttataactataattaatattattt 36784336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 24131554 - 24131493
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| |||||||||||||||| | |||||||||| |||||| ||||||||| |||||||||    
T  24131554 tgacttatttcacttttcaatgcaatattaattacttttttccaattataacactaattaat 24131493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 52830581 - 52830508
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaatta 346  Q
    ||||||||||||||||| |||||||||||||||||  | |||||||||| |||||||  |||||| | ||||||    
T  52830581 tgttttaaaataactgagtcatttcacttttcaatacaatattaattacttttttctctttataattttaatta 52830508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 37643390 - 37643450
Alignment:
Q  277 ttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataa 337  Q
    ||||||||||||||| ||||||||||| |||  | |||||||||| |||||||||||||||    
T  37643390 ttaaaataactgacttatttcactttttaataaaatattaattacttttttctaattataa 37643450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 30903376 - 30903313
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||||||||||||  | |||||||||  |||||| ||||||||||||||||||| ||||||    
T  30903376 catttcacttttcaattcaatattaattatttttttccaattataactctaattaatattattt 30903313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 31798378 - 31798433
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||| || |||||||||| |||||| ||||||||| |||||||||    
T  31798378 atttcacttttcaatataatattaattacttttttccaattataacactaattaat 31798433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 11426032 - 11425962
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||||||||||| ||||  | |||||||||| |||||  |||||||||| ||||||||    
T  11426032 taaaataactgagtcatttcactttccaatacaatattaattactttttttcaattataactttaattaat 11425962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 27698757 - 27698827
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| ||| |||||||||||||||||  | |||||||||| ||||||   |||||||||||||||||    
T  27698757 taaaataattgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaat 27698827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 28277201 - 28277131
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||||||| |||| |||  | |||||||||| |||||||  |||||||||||||||||    
T  28277201 taaaataactgagtcatttcattttttaatacaatattaattacttttttctctttataactctaattaat 28277131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 4466316 - 4466247
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||| |||||||||||| ||||  | |||||||||  |||||| |||||||||||||||||||    
T  4466316 aaaataattgagtcatttcactttccaatacaatattaattatttttttccaattataactctaattaat 4466247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 17342774 - 17342843
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| | |||||||||||||||  | ||||||||||  |||| | ||||||||||||||||||    
T  17342774 aaaataactgagttatttcacttttcaatacaatattaattactattttttcattataactctaattaat 17342843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 27831804 - 27831861
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattata-actctaattaat 348  Q
    ||||||||||||||||| |  |||||||||||||||| ||||||| ||||||||||||    
T  27831804 catttcacttttcaatgcaacattaattacctttttccaattatacactctaattaat 27831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 29225707 - 29225768
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  | || ||||||| |||||| |||||||||||||||||||    
T  29225707 tgacccatttcacttttcaatacaataataattacttttttccaattataactctaattaat 29225768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 44657278 - 44657367
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||| ||||||||| |||||  | | ||||| ||||||||| || ||||||| || |||||  ||||||||||||||||||| ||||||    
T  44657278 aaaatattgttttaagataacaaatttatttctcttttcaatataatattaataactttttttcaattataactctaattaatattattt 44657367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 46536286 - 46536355
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | |||||||||| ||||||    ||||||||||||||||    
T  46536286 aaaataactgagtcatttcacttttcaatacaatattaattacatttttccctctataactctaattaat 46536355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 43895793 - 43895869
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||| ||| |||||||||||||||||  | |||||||||| |||| ||  ||| ||||||||||||| ||||||    
T  43895793 aaaataaatgagtcatttcacttttcaatacaatattaattactttttcctctttacaactctaattaatattattt 43895869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 48242751 - 48242683
Alignment:
Q  280 aaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| | |||||||||||||||||  | |||||||||| |||||||  |||||||| ||||||||    
T  48242751 aaataacttagtcatttcacttttcaatacaatattaattacttttttctttttataactttaattaat 48242683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 50333894 - 50333950
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||| ||  ||||||||| ||||| ||||||||||||||||||||    
T  50333894 catttcactttccaatataacattaattacttttttttaattataactctaattaat 50333950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 348
Target Start/End: Complemental strand, 705497 - 705442
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||| || |||||||||  |||||| || ||||||||||||||||    
T  705497 atttcacttttcaatataatattaattatttttttccaaatataactctaattaat 705442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 2886131 - 2886186
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  2886131 atttcacttttcaatacaatattaattacttttttccaattataacactaattaat 2886186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 16956344 - 16956398
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||| ||||||||| | |||||||||| |||||| |||||||||||||||||||    
T  16956344 atttcatttttcaatgcaatattaattacttttttc-aattataactctaattaat 16956398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 49944735 - 49944805
Alignment:
Q  277 ttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||| || ||||||||| |||||||  | |||||||||| |||||||  |||||||||||||||||    
T  49944735 ttaaaataaccgagtcatttcacctttcaatacaatattaattacttttttctt-ttataactctaattaat 49944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 14884406 - 14884448
Alignment:
Q  130 gctatctatagagaatagacgacaactcaacttccaatgtaag 172  Q
    ||||| ||||||||||||||  |||||||||||||||||||||    
T  14884406 gctatttatagagaatagacagcaactcaacttccaatgtaag 14884448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 26583661 - 26583743
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| |||| | |||| || |||| ||||||||||||||||  | |||||||||| || ||| ||||||||| |||||||||    
T  26583661 aaaatattgtctcaaaaaaattgacccatttcacttttcaatacaatattaattactttattccaattataacactaattaat 26583743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 1859461 - 1859521
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | |||||||||  |||||| |||||||||| ||||||||    
T  1859461 tgactcatttcacttttcaatacaatattaattatttttttc-aattataactttaattaat 1859521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 5115975 - 5115918
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||| ||  || |||||| |||||| ||||||| |||||||||||    
T  5115975 tcatttcacttttcaatataacatcaattacttttttcaaattatagctctaattaat 5115918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 12267785 - 12267724
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||     ||||||||| |||||| ||||||||||||| |||||    
T  12267785 tgactcatttcacttttcaatacgacattaattacttttttccaattataactctagttaat 12267724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 16451585 - 16451646
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  ||||||||| |||||| |||||||||| ||||||||    
T  16451585 tgacccatttcacttttcaatacaacattaattacttttttccaattataactttaattaat 16451646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 16460738 - 16460799
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  ||||||||| |||||| |||||||||| ||||||||    
T  16460738 tgacccatttcacttttcaatacaacattaattacttttttccaattataactttaattaat 16460799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 18186359 - 18186299
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | |||| ||||| |||||  |||||||||||||||||||    
T  18186359 tgactcatttcacttttcaatacaatatt-attactttttttcaattataactctaattaat 18186299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 19533081 - 19533012
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||| ||||||||||  | |||||||||| ||||||   |||||||| ||||||||    
T  19533081 aaaataactgagtcattttacttttcaatacaatattaattacttttttccctttataactttaattaat 19533012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 26760115 - 26760172
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||  | |||||||||| |||||  ||||||||| |||||||||    
T  26760115 tcatttcacttttcaatacaatattaattacattttttcaattataacactaattaat 26760172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 26924419 - 26924362
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||  | |||||||||| |||||  ||||||||| |||||||||    
T  26924419 tcatttcacttttcaatacaatattaattacattttttcaattataacactaattaat 26924362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 44580470 - 44580531
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | |||| ||||  |||| ||||||||||| |||||||||    
T  44580470 tgactcatttcacttttcaatacaatattcattattttttcctaattataacactaattaat 44580531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 10587710 - 10587674
Alignment:
Q  312 tattaattacctttttctaattataactctaattaat 348  Q
    |||||||||| |||||||||||||||| |||||||||    
T  10587710 tattaattacttttttctaattataacactaattaat 10587674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 14890072 - 14890108
Alignment:
Q  131 ctatctatagagaatagacgacaactcaacttccaat 167  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  14890072 ctatttatagagaatagatgacaactcaacttccaat 14890108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 6787185 - 6787309
Alignment:
Q  222 aaaatatactctctccgttccattataagtgagtattttattataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattac 321  Q
    |||| |||||| ||||||  ||| |||||||||| |||| | | ||||| ||||  |||||||| | |||||||||||||||||||| | |||||||||     
T  6787185 aaaacatactccctccgtctcataataagtgagt-ttttgtaaaaaaatattgtgctaaaataaattactcatttcacttttcaatgcaatattaattat 6787283  T
Q  322 ctttttctaattataactctaattaa 347  Q
     ||||||||| |||||||||||||||    
T  6787284 ttttttctaaatataactctaattaa 6787309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 3604762 - 3604692
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||||||||||||||||  | |||||||||  ||||||   |||||||||||||||||    
T  3604762 taaaataactgagtcatttcacttttcaatacaatattaattatttttttccctttataactctaattaat 3604692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 30064111 - 30064041
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||||||||||| ||||  | |||||||||| ||||||   |||||||||||||||||    
T  30064111 taaaataactgagtcatttcactttccaatacaatattaattacttttttccctttataactctaattaat 30064041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 15321374 - 15321317
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||| ||||||| |  |||||||||| |||||||||||||||| |||||||||    
T  15321374 tcatttcacgtttcaatattatattaattacttttttctaattataacactaattaat 15321317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 355
Target Start/End: Original strand, 31723390 - 31723516
Alignment:
Q  228 tactctctccgttccattataagtgagtattttattataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattaccttttt 327  Q
    ||||| |||| |||||| ||||||||| ||||| | | ||||| || |  |||||||| ||||  |||||||||||||||  | |||||||||| |||||    
T  31723390 tactccctccattccataataagtgagcattttgtaaaaaaatattatcataaaataa-tgacatatttcacttttcaatacaatattaattactttttt 31723488  T
Q  328 ctaattataactctaattaattttattt 355  Q
      |||||||| | |||||||| ||||||    
T  31723489 tcaattataattataattaatattattt 31723516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 34703565 - 34703615
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttc 328  Q
    ||||||| ||||||||||||||||||||||  ||||||||| || ||||||    
T  34703565 taaaatatctgactcatttcacttttcaatacagtattaatcacttttttc 34703615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 9354596 - 9354535
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| ||| |||  || |||||||||| |||||  |||||||||||||||||||    
T  9354596 tgactcatttcattttccaaaataatattaattactttttttcaattataactctaattaat 9354535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 15081369 - 15081438
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||   |||||||||||||||  | |||||||||| ||||||   |||||||||||||||||    
T  15081369 aaaataactgaacaatttcacttttcaatacaatattaattacttttttccctttataactctaattaat 15081438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 33921622 - 33921561
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||| |||   | |||||||||| |||||| |||||||||||||||||||    
T  33921622 tgacccatttcactttccaaaacaatattaattacttttttccaattataactctaattaat 33921561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 3166256 - 3166200
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||||||||  |  ||||||||| |||||| |||||||||||||||||||    
T  3166256 catttcaattttcaatacaacattaattacttttttccaattataactctaattaat 3166200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 8232458 - 8232402
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||  |  ||||||||| |||||| |||||||| ||||||||||    
T  8232458 catttcacttttcaatacaacattaattacttttttccaattataattctaattaat 8232402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 15325106 - 15325162
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||| |  |||||||||| |||||| ||||||||  |||||||||    
T  15325106 catttcacttttcaatattatattaattacttttttccaattataatactaattaat 15325162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 1825410 - 1825333
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    |||||||||||| ||||||||||||||||| || |||||||||  |||||||  ||||||||||||||||| ||||||    
T  1825410 taaaataactgagtcatttcacttttcaatataatattaattatttttttctttttataactctaattaatattattt 1825333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 29136951 - 29136881
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||  ||||| ||||||||||| | |||||||||| |||||  |||||||||||||||||||    
T  29136951 taaaataactgatccattttacttttcaatgcaatattaattactttttttcaattataactctaattaat 29136881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 41436426 - 41436496
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||| |||  |||||||||||||||  | |||||||||  ||||||||||||||||||||||||||    
T  41436426 taaaataaccgaccaatttcacttttcaatacaatattaattatttttttctaattataactctaattaat 41436496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 49448783 - 49448856
Alignment:
Q  277 ttaaaataactgactcatttcacttttcaatgtagtattaattac--ctttttctaattataactctaattaat 348  Q
    |||||||||||||  |||||||||||||||| || ||||||||||   ||||| ||||||||||||||||||||    
T  49448783 ttaaaataactgatccatttcacttttcaatataatattaattacttttttttttaattataactctaattaat 49448856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 18849920 - 18849851
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | |||||||||| ||||||   |||||||||||||||||    
T  18849920 aaaataactgagtcatttcacttttcaataaaatattaattacttttttccctttataactctaattaat 18849851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 38319865 - 38319926
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  38319865 tgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaat 38319926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 40021111 - 40021040
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttct-aattataactctaattaat 348  Q
    ||||||||||||| ||||||| || |||||| | |||||||||| ||||| | |||||||||||||||||||    
T  40021111 taaaataactgacccatttcagttctcaatgcaatattaattacttttttttcaattataactctaattaat 40021040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 47846831 - 47846914
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattac-ctttttctaattataactctaattaat 348  Q
    ||||| ||||| |||||||||||| |||| | ||||||||||  | ||||||| |  |||||||||||||||||||||||||||    
T  47846831 aaaatattgttctaaaataactgattcatcttacttttcaatacaatattaataattctttttctaattataactctaattaat 47846914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 52677459 - 52677404
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattac 321  Q
    ||||| ||||||||||||||||||||||||| | ||||||||| | ||||||||||    
T  52677459 aaaatattgttttaaaataactgactcattttaattttcaatgcaatattaattac 52677404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 8294977 - 8295043
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaatt 345  Q
    |||||||| || |||||||||||||||||  | |||||||||||||||||   ||||||||||||||    
T  8294977 aaaataaccgagtcatttcacttttcaatacaatattaattacctttttccctttataactctaatt 8295043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 348
Target Start/End: Complemental strand, 22872530 - 22872480
Alignment:
Q  298 acttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| | |||||||||| |||||| |||||||||||||||||||    
T  22872530 acttttcaatgcaatattaattacttttttccaattataactctaattaat 22872480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 39979713 - 39979795
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| ||||||||||| ||| | |||||||||||||||  | |||||||||| |||| |   |||||||||||||||||    
T  39979713 aaaatttttttttaaaataattgagttatttcacttttcaatacaatattaattactttttcccctttataactctaattaat 39979795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 25581464 - 25581392
Alignment:
Q  275 ttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| ||| |||||| | |||| ||| || |||||||||| ||||| ||||||||||||||||||||    
T  25581464 ttttaaaataattgattcattttattttt-aatataatattaattacttttttttaattataactctaattaat 25581392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 28279791 - 28279852
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  |  ||||||||| |||||  |||||||||||||||||||    
T  28279791 tgactcatttcacttttcaatacaacattaattactttttttcaattataactctaattaat 28279852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 29550880 - 29550819
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  |||||||||||||||  |||||||||||||||||||    
T  29550880 tgacccatttcacttttcaatacaacattaattaccttttttcaattataactctaattaat 29550819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 42738494 - 42738433
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataact 339  Q
    ||||| || |||||||||||||||||||||  | ||||||||| ||||||| ||||||||||    
T  42738494 taaaaaaattgactcatttcacttttcaatacaatattaattatctttttccaattataact 42738433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 48740466 - 48740535
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| ||||||||||||||||   | |||||||||| ||||||   |||||||||||||||||    
T  48740466 aaaataactgagtcatttcacttttcaaaacaatattaattacttttttccctttataactctaattaat 48740535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 49812175 - 49812244
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | |||||||||  ||||||   |||||||||||||||||    
T  49812175 aaaataactgagtcatttcacttttcaatacaatattaattatttttttccctttataactctaattaat 49812244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 53848286 - 53848347
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  | |||||||||  |||||||||||||||| |||||||||    
T  53848286 tgacccatttcacttttcaatacaatattaattatttttttctaattataacactaattaat 53848347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 54729644 - 54729575
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||| ||||  | |||||||||| ||||||   |||||||||||||||||    
T  54729644 aaaataactgaatcatttcactttccaatacaatattaattacttttttccctttataactctaattaat 54729575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 11469816 - 11469872
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||||| |||||||||  ||| |  |||||||||||||||||||    
T  11469816 catttcacttttcaatgtaatattaattatttttcttcaattataactctaattaat 11469872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 11521645 - 11521589
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||||| |||||||||  ||| |  |||||||||||||||||||    
T  11521645 catttcacttttcaatgtaatattaattatttttcttcaattataactctaattaat 11521589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 25287282 - 25287338
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| ||||   ||||| |||| ||||||||||||||||||||||||||    
T  25287282 catttcactttttaatgcgatattatttacttttttctaattataactctaattaat 25287338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 37316070 - 37316014
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  37316070 catttcacttttcaatacaatattaattacatttttccaattataacactaattaat 37316014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 355
Target Start/End: Original strand, 51527369 - 51527441
Alignment:
Q  283 taactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||| ||||||||||||| |||  | |||||||||| ||||||   ||||||||||||||||| ||||||    
T  51527369 taactgagtcatttcactttttaatacaatattaattacttttttccttttataactctaattaatattattt 51527441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 17237003 - 17237058
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||| || |||||||||  |||||  |||||||||||||||||||    
T  17237003 atttcacttttcaatataatattaattaatttttttcaattataactctaattaat 17237058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 308
Target Start/End: Complemental strand, 22872581 - 22872551
Alignment:
Q  278 taaaataactgactcatttcacttttcaatg 308  Q
    |||||||||||||||||||||||||||||||    
T  22872581 taaaataactgactcatttcacttttcaatg 22872551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 44633110 - 44633172
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattaccttttt-ctaattataactctaattaat 348  Q
    |||||||||||||||||||||  |  ||||||||| ||||| | |||||||||||||||||||    
T  44633110 tgactcatttcacttttcaatacaacattaattactttttttccaattataactctaattaat 44633172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 51572389 - 51572320
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| ||||| |||||||||||||||  | ||||||||   ||||| ||||||||||||||||||||    
T  51572389 taaaataattgacttatttcacttttcaatacaatattaatttttttttt-taattataactctaattaat 51572320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 54217275 - 54217357
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| ||||| || || || |||||||||||| ||||||||  | |||||||||| |||||| |||||||||  ||||||||    
T  54217275 aaaatattgttctagaaaaattgactcatttcatttttcaatacaatattaattacttttttccaattataacattaattaat 54217357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 22129216 - 22129163
Alignment:
Q  295 ttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||  | |||||||||| ||||  ||||||||||||||||||||    
T  22129216 ttcacttttcaatacaatattaattactttttcttaattataactctaattaat 22129163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 42185957 - 42185888
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||| |||||| ||||||||||  |  ||||||||| |||||| | |||||||||||||||||    
T  42185957 aaaataagtgagtcattttacttttcaatacatcattaattacttttttccatttataactctaattaat 42185888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 348
Target Start/End: Complemental strand, 43335196 - 43335115
Alignment:
Q  267 aaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||| |||||||||||| | |||||||||||||||  | |||||||||| ||||   |||||| ||| ||||||||    
T  43335196 aaatattgttctaaaataactgatttatttcacttttcaatacaatattaattactttttatcaattatgactataattaat 43335115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 2906639 - 2906706
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    |||| |||||||||||||||| ||  ||||||||  |||||| ||| ||||||||||||||| ||||||    
T  2906639 tgacccatttcacttttcaatataacattaattatttttttcaaat-ataactctaattaatattattt 2906706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 19688255 - 19688330
Alignment:
Q  272 ttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||| ||||  |||||||||||||||  | ||| |||||| |||||| |||||||||| | ||||||    
T  19688255 ttgttttaaaataaatgacctatttcacttttcaatacaatatcaattacttttttc-aattataactttgattaat 19688330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 346
Target Start/End: Original strand, 30568553 - 30568620
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaatta 346  Q
    ||||||||||||||||||| | |||| |||  | ||||||||| |||||| ||||||||||| ||||||    
T  30568553 taaaataactgactcattttatttttaaatagaatattaatta-ctttttttaattataactttaatta 30568620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 33047444 - 33047492
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattaccttttt 327  Q
    ||||||||||| |||||||||||||||||  | |||||||||| |||||    
T  33047444 aaaataactgagtcatttcacttttcaatacaatattaattacattttt 33047492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 55360499 - 55360440
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttct--aattataactctaattaat 348  Q
    |||||||||||||||||  | |||||||||| ||||| |  |||||||||||||||||||    
T  55360499 tcatttcacttttcaatacaatattaattactttttttttcaattataactctaattaat 55360440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 347
Target Start/End: Original strand, 14136711 - 14136778
Alignment:
Q  280 aaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaa 347  Q
    ||||||||||||||| ||||||||||||  | |||||||||| |||||| ||||||||||||||||||    
T  14136711 aaataactgactcatgtcacttttcaatacaatattaattacttttttccaattataactctaattaa 14136778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 31546216 - 31546114
Alignment:
Q  241 ccattataagtgagtattttattataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactc 340  Q
    |||||||||||||||||||| | | ||||| ||||| ||||||||| | |||||||||||||| |||  | |||||||||| |||||  |||||||||||    
T  31546216 ccattataagtgagtattttctaa-aaaatattgttctaaaataaccgtctcatttcacttttaaatacaatattaattactttttttcaattataactc 31546118  T
Q  341 taat 344  Q
    ||||    
T  31546117 taat 31546114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 28526909 - 28526979
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| ||||||||||||||||| || |||||||||| |||||||  |||||||| ||||||||    
T  28526909 taaaataactgaatcatttcacttttcaatataatattaattacttttttctctttataactataattaat 28526979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 43950600 - 43950531
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||| |||||||||||||||||| |||||||||  |||||| |||||||||| ||||||||    
T  43950600 taaaataactgacttatttcacttttcaatgtaatattaattatttttttc-aattataactttaattaat 43950531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 348
Target Start/End: Complemental strand, 10069790 - 10069677
Alignment:
Q  235 tccgttccattataagtgagtattttattataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaatta 334  Q
    ||||| |||| |||||||| |||||| ||| ||||| ||||   |||||||| ||  ||||||||||||||||| | |||||||||| |||||  ||| |    
T  10069790 tccgtcccataataagtgactattttgttaaaaaatattgtaccaaaataaccgatacatttcacttttcaatgcaatattaattacttttttacaatga 10069691  T
Q  335 taactctaattaat 348  Q
    ||||||||||||||    
T  10069690 taactctaattaat 10069677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 18181376 - 18181305
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaatta-cctttttctaattataactctaattaat 348  Q
    ||||||||||||| ||||||||||||||||  | |||||||||   ||||||||||||||||||||||||||    
T  18181376 taaaataactgacccatttcacttttcaatacaatattaattattttttttctaattataactctaattaat 18181305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 45464376 - 45464309
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||| ||||| ||||| | |||||||||  ||||| ||||||||||||||||||||    
T  45464376 aaaataactgactcattttactttccaatgcaatattaatta--tttttttaattataactctaattaat 45464309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 5007687 - 5007634
Alignment:
Q  295 ttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||| | ||||||||||||||||  |||||||||||||||||||    
T  5007687 ttcacttttcaatgcaatattaattaccttttttcaattataactctaattaat 5007634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 341
Target Start/End: Original strand, 11842474 - 11842543
Alignment:
Q  272 ttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactct 341  Q
    ||||| ||| |||| |||||||||| ||||||||||| | |||||||||| |||||| ||||||||||||    
T  11842474 ttgttctaagataattgactcattttacttttcaatgcaatattaattacatttttccaattataactct 11842543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 734174 - 734107
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattac--ctttttctaattataactctaat 344  Q
    ||||||| |||| ||||||||||||||||| | ||||||||||   ||||||||||||||||||||||    
T  734174 aaaataattgacacatttcacttttcaatggattattaattacttttttttctaattataactctaat 734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 7650138 - 7650067
Alignment:
Q  277 ttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||| ||||||||||||| |||  | |||||||||| ||||||   |||||||||||||||||    
T  7650138 ttaaaataactgaatcatttcacttttaaatacaatattaattacttttttccttttataactctaattaat 7650067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 41436019 - 41436094
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| ||||||||||| |||||||||||||||||  | |||||||||| |||| |   |||||||||||||||||    
T  41436019 tgtttcaaaataactgagtcatttcacttttcaatacaatattaattactttttcccttttataactctaattaat 41436094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 3100346 - 3100415
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | |||||||||| ||||||   || ||||||||||||||    
T  3100346 aaaataactgagtcatttcacttttcaatacaatattaattacttttttccctttgtaactctaattaat 3100415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 8385016 - 8385088
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaatta 346  Q
    |||| |||||||| ||||| |||||||||||||||  | |||||||||| |||||| |||||||||| ||||||    
T  8385016 tgttctaaaataattgacttatttcacttttcaatacaatattaattacatttttc-aattataactttaatta 8385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 31592505 - 31592572
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    |||||||||||||||||||||  | || |||||| ||||||| |||||||||| |||||||| ||||||    
T  31592505 tgactcatttcacttttcaatacaataataatta-ctttttccaattataactttaattaatattattt 31592572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 32556125 - 32556181
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattata-actctaattaat 348  Q
    |||||||||||||||| | ||||||||||||||||| ||||||| | ||||||||||    
T  32556125 atttcacttttcaatgcaatattaattacctttttccaattatacagtctaattaat 32556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 44194593 - 44194663
Alignment:
Q  274 gttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaatt 345  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||  ||||||   ||||||||||||||    
T  44194593 gttttaaaataactgaatcatttcacttttcaatacaatattaatta-ttttttccttttataactctaatt 44194663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 883301 - 883263
Alignment:
Q  288 gactcatttcacttttcaatgtagtattaattacctttt 326  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  883301 gactcatttcacttttcaatgtaatattaattaactttt 883263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 7931649 - 7931588
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  ||||||||| |||||  |||||||||||||||||||    
T  7931649 tgacccatttcacttttcaatacaacattaattactttttttcaattataactctaattaat 7931588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 15859500 - 15859435
Alignment:
Q  282 ataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaa 347  Q
    |||| ||| |||||||||||||||||  | |||||||||| ||||||   ||||||||||||||||    
T  15859500 ataattgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaa 15859435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 24356065 - 24356126
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  ||||||||| |||||  |||||||||||||||||||    
T  24356065 tgacccatttcacttttcaatacaacattaattactttttttcaattataactctaattaat 24356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 27001524 - 27001573
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattaccttttt 327  Q
    ||||||| ||||||||||||||||||||||| | ||||||| || |||||    
T  27001524 taaaatatctgactcatttcacttttcaatgcaatattaatcactttttt 27001573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 33751407 - 33751476
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||| |||||||||||||||||  |  ||||||||| ||||||   |||||||||||||||||    
T  33751407 aaaataaatgagtcatttcacttttcaatacatcattaattacttttttccctttataactctaattaat 33751476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 37028700 - 37028773
Alignment:
Q  275 ttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||   |||||  ||||| ||| || |||||||||  |||||||| |||||||||||||||||    
T  37028700 ttttaaaataactgttgcattttcctttttaatataatattaattatttttttctatttataactctaattaat 37028773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 42881438 - 42881389
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttc 328  Q
    ||||||||||| |||||||||||||||||  | |||||||||| ||||||    
T  42881438 aaaataactgaatcatttcacttttcaatacaatattaattacttttttc 42881389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 5425808 - 5425872
Alignment:
Q  284 aactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| ||||||||||||||||||  | ||||||| || |||||| |||||||| ||||| ||||    
T  5425808 aactgtctcatttcacttttcaatacaatattaataacttttttccaattataaatctaactaat 5425872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 8550781 - 8550734
Alignment:
Q  300 ttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| |||||||||||| |||||| ||||||||||| ||||||||    
T  8550781 ttttcaatatagtattaatta-ctttttttaattataactataattaat 8550734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 36748101 - 36748157
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||| || ||||||||  ||| || |||||||||||||||||||    
T  36748101 catttcactttttaatgcagcattaattatttttctccaattataactctaattaat 36748157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 16884097 - 16884024
Alignment:
Q  277 ttaaaataactgactcatttcacttttcaatgtagtattaat--tacctttttctaattataactctaattaat 348  Q
    ||||||||| |||||||||||||||||||||||| |||||||  ||  ||||| ||||||||||||||||||||    
T  16884097 ttaaaataattgactcatttcacttttcaatgtaatattaattatatatttttttaattataactctaattaat 16884024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 33498679 - 33498589
Alignment:
Q  258 tttattataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||| |  ||||||||||||    ||| ||||||||||| | |||||||||  ||||||||||||||||||||||||||    
T  33498679 tttattataaaattttatcataaaataactgatcttttttacttttcaatgcaatattaattatttttttctaattataactctaattaat 33498589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 5357979 - 5357910
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||  |||||||||||| ||||  |||||||||||| |||||| |||||||||||||||||||    
T  5357979 aaaataactgtgtcatttcactttccaatacagtattaattacttttttcaaattataactctaattaat 5357910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 6629547 - 6629482
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaatttta 352  Q
    |||||||||||||||||||||  |  | ||||||| ||||||||||||||||||||||||||||||    
T  6629547 tgactcatttcacttttcaatacaacaataattacttttttctaattataactctaattaatttta 6629482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 30437903 - 30437834
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| |||||| ||||||||||||| |||  | |||||||||| ||||| ||||||||||||||||||||    
T  30437903 aaaacaactgagtcatttcacttttaaatacaatattaattacttttttttaattataactctaattaat 30437834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 13597960 - 13598032
Alignment:
Q  264 ataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattata 336  Q
    ||||||| ||||  |||||||| |||||||||||||||||||||  | |||||||||| ||||| ||||||||    
T  13597960 ataaaatattgtcctaaaataattgactcatttcacttttcaatacaatattaattacttttttttaattata 13598032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 39036005 - 39035949
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaa 347  Q
    |||||||||||||||||  | ||||||||||||||||||| ||||||| ||||||||    
T  39036005 tcatttcacttttcaatacaatattaattacctttttctacttataacactaattaa 39035949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 25814304 - 25814379
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| |||||||||||| |||||||||||||||||  | |||||||||| ||||||   |||||||| ||||||||    
T  25814304 tgttctaaaataactgaatcatttcacttttcaatacaatattaattacttttttccttttataactttaattaat 25814379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 31956662 - 31956745
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttt-tctaattataactctaattaat 348  Q
    ||||| ||||| |||||||| |||   ||||||||||| |||| | |||||||||| |||| ||||||||||||||||||||||    
T  31956662 aaaatattgttctaaaataattgatctatttcactttttaatgaaatattaattactttttttctaattataactctaattaat 31956745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 42818864 - 42818919
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||| || |||||||||| |||||  |||||||||||||||||||    
T  42818864 atttcacttttcaatataatattaattactttttttcaattataactctaattaat 42818919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 4412328 - 4412398
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||| | |||||||||||||||||  | |||||||||| ||||||   |||||||||||||||||    
T  4412328 taaaataactaagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaat 4412398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 8941213 - 8941266
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaa 347  Q
    ||||||||||||||| || |||||||||| |||||| ||||||||||||||||||    
T  8941213 atttcacttttcaatctaatattaattacttttttc-aattataactctaattaa 8941266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 15814609 - 15814676
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | |||||||||  |||||||  |||||||||||||||||    
T  15814609 aaaataactgagtcatttcacttttcaatacaatattaattatttttttct--ttataactctaattaat 15814676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 14259613 - 14259682
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||| |||||||| || |||||||||| ||||||   |||||| ||||||||||    
T  14259613 aaaataactgattcatttcatttttcaatataatattaattacttttttccttttataattctaattaat 14259682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 13716956 - 13717032
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||||||| |||||| | ||||||||  | |||||||||| ||||||   ||||||||||||||||| ||||||    
T  13716956 aaaataactgagtcattttatttttcaatacaatattaattacttttttccctttataactctaattaatattattt 13717032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 9426730 - 9426667
Alignment:
Q  264 ataaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattaccttttt 327  Q
    ||||||| ||||  |||||||| |||||||||||||||||||||  | |||||||||| |||||    
T  9426730 ataaaatattgtcctaaaataattgactcatttcacttttcaatacaatattaattactttttt 9426667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 4475191 - 4475261
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattata-actctaattaat 348  Q
    |||||||||||| || |||||||||||||| | |||||||||| | |||| ||||||| ||| ||||||||    
T  4475191 aaaataactgacccaattcacttttcaatgcaatattaattacatatttccaattatacactataattaat 4475261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 13422514 - 13422445
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||||||||||||||||  | |||||||||  | ||| ||||||||||| ||||||||    
T  13422514 taaaataactgattcatttcacttttcaatacaatattaatta-ttatttttaattataactataattaat 13422445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 15898125 - 15898206
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| |||||| | || || ||||| |||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  15898125 aaaatattgtttcagaaaaattgacttatttcacttttcaatacaatattaattacttttttc-aattataacactaattaat 15898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 35646248 - 35646182
Alignment:
Q  282 ataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| |||||||||||||||||    |||||||||| ||||||   |||||||||||||||||    
T  35646248 ataactgagtcatttcacttttcaatacgatattaattacttttttccttttataactctaattaat 35646182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 39008074 - 39008144
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||| | |||||||||||||||||  | |||||||||  ||||||   |||||||||||||||||    
T  39008074 taaaataactaagtcatttcacttttcaatacaatattaattatttttttccctttataactctaattaat 39008144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 11099639 - 11099570
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||| ||||  | |||||||||| |||| |   |||||||||||||||||    
T  11099639 aaaataactgagtcatttcactttccaatacaatattaattactttttcccctttataactctaattaat 11099570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 33012300 - 33012369
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||| ||||  ||||||||||||||||| | |||||||||| |||||||  ||||||| ||| |||||    
T  33012300 aaaatatctgagccatttcacttttcaatgcaatattaattacttttttctctttataacgctagttaat 33012369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 41184063 - 41184132
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| | |||| ||||||||||  | |||||||||| |||||  | |||||||||||||||||    
T  41184063 aaaataactgagtgattttacttttcaatacaatattaattacattttttcatttataactctaattaat 41184132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 4194599 - 4194655
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||  | |||||||||| |||||  ||||||||| |||||||||    
T  4194599 catttcacttttcaatacaatattaattactttttttcaattataacactaattaat 4194655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 39171489 - 39171558
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||| |||||||||| || |||||||||| |||||||  |||||||||||||||||    
T  39171489 aaaataactgagtcatttaacttttcaatataatattaattacttttttctttttataactctaattaat 39171558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 42412544 - 42412475
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| |||||||||||||||||||| |||| | |||||||||| |||||| ||||||| |||||||||||    
T  42412544 aaaaaaactgactcatttcactttttaatgcaatattaattacttttttccaattatagctctaattaat 42412475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 13085100 - 13085036
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    |||||||||||||||||  | ||||||||||||||||| || |||||||||||||||| ||||||    
T  13085100 tcatttcacttttcaatacaatattaattacctttttccaaatataactctaattaatgttattt 13085036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 348
Target Start/End: Complemental strand, 7755277 - 7755151
Alignment:
Q  224 aatatactctctccgttccattataagtgagtattttattataaaa--ttttgttttaaaataactgactcatttcacttttcaatgtagtattaattac 321  Q
    |||||||||  | |||||||| ||||||||||||||| | | ||||  | || |  ||||||||||||||||||||| |||| |||| | |||||||||     
T  7755277 aatatactccttacgttccataataagtgagtattttgtaaaaaaaaatattatcgtaaaataactgactcatttcaatttttaatgcaatattaattat 7755178  T
Q  322 ctttttctaattataactctaattaat 348  Q
     ||||||||||||||| | ||||||||    
T  7755177 ttttttctaattataaatttaattaat 7755151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 348
Target Start/End: Complemental strand, 12958355 - 12958274
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| |||| |||||||||||  || ||||||||||| |||  | |||||||||| ||||||||||||||||||||||||||    
T  12958355 aaaatattgtcttaaaataactttct-atttcactttttaatacaatattaattacttttttctaattataactctaattaat 12958274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 32231873 - 32231812
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  32231873 tgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaat 32231812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 33191070 - 33191003
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaatta 346  Q
    ||||||||||| |||||||||||||||||  | |||||||||| ||||||   |||||||||||||||    
T  33191070 aaaataactgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaatta 33191003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 27571449 - 27571495
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaatt 333  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||    
T  27571449 tgactcatttcacttttcaatataatattaattacctttttccaatt 27571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 886601 - 886540
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | |||||||||| |||||  ||||||||| |||||||||    
T  886601 tgactcatttcacttttcaatacaatattaattactttttttcaattataacactaattaat 886540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 14689914 - 14689975
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  14689914 tgacccatttcacttttcaatacaatattaattacttttttccaattataacactaattaat 14689975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 25174738 - 25174677
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| |||||||||||||||| || |||||||||| |||||| || |||||| |||||||||    
T  25174738 tgacccatttcacttttcaatataatattaattacatttttccaactataacactaattaat 25174677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 28791262 - 28791323
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||| |  ||||||||| ||| || |||||||||||||||||||    
T  28791262 tgacccatttcacttttcaatgcaacattaattacttttctccaattataactctaattaat 28791323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 32678994 - 32679050
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||  |  |||||||||||||||  |||||||||||||||||||    
T  32678994 catttcacttttcaatacaacattaattaccttttttcaattataactctaattaat 32679050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 41726476 - 41726536
Alignment:
Q  288 gactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||||||  | |||||||||| |||||  |||||||||| ||||||||    
T  41726476 gactcatttcacttttcaatacaatattaattactttttttcaattataactgtaattaat 41726536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 45421088 - 45421032
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  45421088 catttcacttttcaatacaatattaattacttttttccaattataacactaattaat 45421032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 2349290 - 2349365
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| ||||||||| | ||||||||| |||||||  | ||||||||||||||||    |||||||||||||||||    
T  2349290 tgtttcaaaataacttagtcatttcacgtttcaatacaatattaattaccttttttcttttataactctaattaat 2349365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 348
Target Start/End: Complemental strand, 8418478 - 8418394
Alignment:
Q  266 aaaattttgttttaaaataactgactcatttcacttttcaatgta---gtattaattacctttttctaattataactctaattaat 348  Q
    ||||| |||||| |||| || ||||||||||||||||||||| ||   ||||||||||  |||||  |||||||||||||||||||    
T  8418478 aaaatattgtttcaaaa-aattgactcatttcacttttcaatataatagtattaattattttttttcaattataactctaattaat 8418394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 2796993 - 2797055
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattaccttttt-ctaattataactctaattaat 348  Q
    |||||||||||||||||||||  | |||||||||  ||||| | |||||||||||||||||||    
T  2796993 tgactcatttcacttttcaatacaatattaattatttttttaccaattataactctaattaat 2797055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 3442429 - 3442498
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| ||||| |||| ||||||||||  | |||||||||  |||||| |||||||||||||||||||    
T  3442429 taaaataagtgacttattttacttttcaattcaatattaattatttttttc-aattataactctaattaat 3442498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 4274466 - 4274384
Alignment:
Q  273 tgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    ||||||||||||| | | ||||||| |||||||||  |  ||||||||| |||||  | ||||||||||||||||| ||||||    
T  4274466 tgttttaaaataagtaagtcatttcgcttttcaatacatcattaattactttttttcatttataactctaattaatattattt 4274384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 5391994 - 5392064
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattac-ctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | ||||||||||  ||||||   |||||||||||||||||    
T  5391994 aaaataactgagtcatttcacttttcaatacaatattaattactttttttccctttataactctaattaat 5392064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 7258527 - 7258459
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||  ||| ||||||| |||| | |||||||| |||||||| |||||||||||||||||||    
T  7258527 taaaataactgacatatt-cactttttaatgcaatattaatt-cctttttccaattataactctaattaat 7258459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 32241586 - 32241516
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||| ||| | |||||||||||||||  | |||||||||| ||||||   |||||||||||||||||    
T  32241586 taaaataaatgagttatttcacttttcaatacaatattaattacttttttccctttataactctaattaat 32241516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 2195422 - 2195483
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  | ||||||| |||||| |||||||||||||||||||    
T  2195422 tgacccatttcacttttcaatacaacaataattacttttttccaattataactctaattaat 2195483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 29638255 - 29638316
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  |  ||||||||||||||   |||||||||||||||||||    
T  29638255 tgacccatttcacttttcaatacaacattaattaccttttctcaattataactctaattaat 29638316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 43845037 - 43844973
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttct--aattataactctaattaatt 349  Q
    |||||||| ||||||||||||  | |||||||||| ||||| |  ||||||||||||||||||||    
T  43845037 tgactcatatcacttttcaatacaatattaattacttttttttccaattataactctaattaatt 43844973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 44615527 - 44615450
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    |||||||||||| |||||||||||| ||||  | |||||||||| |||  |   ||||||||||||||||| ||||||    
T  44615527 taaaataactgagtcatttcactttccaatacaatattaattacttttccccctttataactctaattaatattattt 44615450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 8839744 - 8839780
Alignment:
Q  312 tattaattacctttttctaattataactctaattaat 348  Q
    |||||||||| |||||| |||||||||||||||||||    
T  8839744 tattaattacatttttccaattataactctaattaat 8839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 26570322 - 26570278
Alignment:
Q  277 ttaaaataactgactcatttcacttttcaatgtagtattaattac 321  Q
    ||||||||||||| |||||||||||||||||  | ||||||||||    
T  26570322 ttaaaataactgattcatttcacttttcaatacaatattaattac 26570278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 36012120 - 36012064
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||  | |||||||||  |||||| | |||||||||||||||||    
T  36012120 catttcacttttcaatacaatattaattatttttttccacttataactctaattaat 36012064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 2868519 - 2868589
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||  ||||||||||||||||  | |||||||||  |||||||||||| |||||||||||||    
T  2868519 taaaataactgatccatttcacttttcaatacaatattaattatttttttctaattacaactctaattaat 2868589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 27668488 - 27668419
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| ||||||||||||||||| || |||||||||  || || ||||||||||||||||||||    
T  27668488 taaaataactgattcatttcacttttcaatataatattaatta-tttgttttaattataactctaattaat 27668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 3862336 - 3862264
Alignment:
Q  275 ttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| | |||||||||||||||||||  | | |||||||| |||||| |||||||||||||||||||    
T  3862336 ttttaaaataattaactcatttcacttttcaatacaattttaattacttttttc-aattataactctaattaat 3862264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 21296663 - 21296595
Alignment:
Q  280 aaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||| |||||||||||||||||  | |||||||||| ||||||   |||||||||||||||||    
T  21296663 aaataactgagtcatttcacttttcaatacaatattaattacttttttccttttataactctaattaat 21296595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 44219177 - 44219125
Alignment:
Q  296 tcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||| | |||||||||| |||||| |||||||||||||||||||    
T  44219177 tcacttttcaatgcaatattaattacttttttccaattataactctaattaat 44219125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 53050985 - 53051041
Alignment:
Q  292 catttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||||| | |||||||||| ||| || |||||||||||||||||||    
T  53050985 catttcacttttcaatgcaatattaattacttttctccaattataactctaattaat 53051041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 8706109 - 8706163
Alignment:
Q  294 tttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||  | |||| ||||| ||||||||||||||||||||||||||    
T  8706109 tttcacttttcaatacaatattgattacttttttctaattataactctaattaat 8706163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 9057996 - 9058050
Alignment:
Q  294 tttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||||||  | |||| ||||| ||||||||||||||||||||||||||    
T  9057996 tttcacttttcaatacaatattgattacttttttctaattataactctaattaat 9058050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 31650876 - 31650930
Alignment:
Q  293 atttcacttttcaatgtagtattaattacctttttctaattataactctaattaa 347  Q
    |||||||||||||||| | ||||||| || ||||||||||||||||| |||||||    
T  31650876 atttcacttttcaatgcaatattaatgacttttttctaattataactttaattaa 31650930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 7885663 - 7885723
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| |||||||||||||||| || |||||||||| |||||| |||||||| ||||||||||    
T  7885663 tgacccatttcacttttcaatata-tattaattacttttttccaattataattctaattaat 7885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 21585571 - 21585502
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||| ||||  | |||||||||  |||| | |||||||||||||||||||    
T  21585571 aaaataactgagtcatttcactttccaatacaatattaattattttttcccaattataactctaattaat 21585502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 30261655 - 30261594
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  | || ||||||| |||| |||||||||||||||||||||    
T  30261655 tgacccatttcacttttcaatacaataataattactttttcctaattataactctaattaat 30261594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 41031518 - 41031587
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||| |||||||||||||||||  | |||||||||| |||||| | |||||||| ||||||||    
T  41031518 aaaataattgagtcatttcacttttcaatacaatattaattacttttttccatttataactttaattaat 41031587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 46194359 - 46194298
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  | |||||||||| |||||| ||||||||| |||||||||    
T  46194359 tgacccatttcacttttcaatacaatattaattacttttttccaattataacactaattaat 46194298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 51637050 - 51636985
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaat 344  Q
    |||||||||||  ||||||||||||||||| | ||||| |||| |||| | |||||||||||||||    
T  51637050 aaaataactgatccatttcacttttcaatgcaatattatttactttttcccaattataactctaat 51636985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 32023263 - 32023193
Alignment:
Q  278 taaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| |||||||||||| ||||  | |||||||||  ||||||   |||||||||||||||||    
T  32023263 taaaataactgagtcatttcactttccaatacaatattaattatttttttccctttataactctaattaat 32023193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 43640726 - 43640676
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttct 329  Q
    ||||||||||| |||||||||||||||||  | |||||||||| |||||||    
T  43640726 aaaataactgagtcatttcacttttcaatacaatattaattacttttttct 43640676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 16276398 - 16276465
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| ||||  ||||||||||| |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  16276398 aaaataattgacatatttcactttttaatgtaatattaatta-ctttttc-aattataattctaattaat 16276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 24619073 - 24619004
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||| |||  |||||||||||| |||  |||||||||||  ||||||  ||||||||||||||||||    
T  24619073 aaaataattgatccatttcactttttaatacagtattaattatttttttccgattataactctaattaat 24619004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 32977947 - 32977882
Alignment:
Q  283 taactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| || ||||||||||||||||| |  ||||||||  ||| || |||||||||||||||||||    
T  32977947 taactaacccatttcacttttcaatgcaacattaattatttttctccaattataactctaattaat 32977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 33994603 - 33994672
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | |||||| ||  ||||||   |||||||||||||||||    
T  33994603 aaaataactgagtcatttcacttttcaatacaatattaaatatttttttccctttataactctaattaat 33994672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 39329903 - 39329842
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||||||||||  |  | ||||||| |||||| |||||||| ||||||||||    
T  39329903 tgactcatttcacttttcaatacaacaataattacttttttccaattataattctaattaat 39329842  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 48409538 - 48409599
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||| ||||||||  |  ||||||||| |||||| |||||||||||||||||||    
T  48409538 tgacccatttcagttttcaatacaacattaattacttttttccaattataactctaattaat 48409599  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 48744171 - 48744240
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||| | |||||| |||||| |||  | |||||||||| |||||||  |||||||||||||||||    
T  48744171 aaaataactaagtcattttactttttaatacaatattaattacttttttctctttataactctaattaat 48744240  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 50736055 - 50736116
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| ||||||||  |  ||||||||| |||||| || ||||||||||||||||    
T  50736055 tgactcatttcagttttcaatagaacattaattacttttttccaactataactctaattaat 50736116  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 50776800 - 50776739
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||| ||||||||  |  ||||||||| |||||| || ||||||||||||||||    
T  50776800 tgactcatttcagttttcaatagaacattaattacttttttccaactataactctaattaat 50776739  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 26142855 - 26142915
Alignment:
Q  282 ataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactcta 342  Q
    |||||||| |||||| |||||||||| || |||||||||| ||||||   |||||||||||    
T  26142855 ataactgagtcattttacttttcaatataatattaattacttttttcctcttataactcta 26142915  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 38600973 - 38600898
Alignment:
Q  272 ttgttttaaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||| |||||||| ||| ||||||||| |||||||  | |||||||||| | |||| | |||||||||||||||||    
T  38600973 ttgttctaaaataattgagtcatttcacctttcaatacaatattaattac-tctttccatttataactctaattaat 38600898  T

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Target: scaffold0578 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 3991 - 4044
Alignment:
Q  295 ttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||||||||||||| | ||||||||||||||||  |||||||||||||||||||    
T  3991 ttcacttttcaatgcaatattaattaccttttttcaattataactctaattaat 4044  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 230203 - 230271
Alignment:
Q  279 aaaataactgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    ||||||||||| |||||||||||||||||  | |||||||||  |||||||  |||||||||||||||||    
T  230203 aaaataactgagtcatttcacttttcaatacaatattaattatttttttct-tttataactctaattaat 230271  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 157981 - 158042
Alignment:
Q  287 tgactcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaat 348  Q
    |||| ||||||||||||||||  | |||||||||  |||||  |||||||||||||||||||    
T  157981 tgacccatttcacttttcaatacaatattaattattttttttcaattataactctaattaat 158042  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 1845 - 1909
Alignment:
Q  291 tcatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattt 355  Q
    |||||||||||||||||| | |||||||||   ||||  |||||||| |||||||||| ||||||    
T  1845 tcatttcacttttcaatgcaatattaattattatttttgaattataagtctaattaatattattt 1909  T

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