View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14529_low_8 (Length: 218)
Name: NF14529_low_8
Description: NF14529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14529_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 44858204 - 44858400
Alignment:
| Q |
1 |
ggtgaaaaaattaaaacgtgtagctgccaataacattttccaaattaaaagataggctcgttaataaacccttctttacccatgaaacgaaacgacagcg |
100 |
Q |
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| T |
44858204 |
ggtgaaaaaattaaaacgtgtagctgccaataacattttccaaattaaaagataggctcgttaataaacccttctttacccatgaaacgaaacgacagcg |
44858303 |
T |
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| Q |
101 |
tttccttctcaagcactgaaaaaacgcgggaaaattttccgccatttccactaagaccccaaaaacaaaaaccccatttttgcaacacttcaactcc |
197 |
Q |
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| T |
44858304 |
tttccttctcaagcactgaaaaaacgcgggaaaattttccgccatttccactaagaccccaaaaacaaaaaccccatttttgcaacacttcaactcc |
44858400 |
T |
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