View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14531_high_4 (Length: 298)
Name: NF14531_high_4
Description: NF14531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14531_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 34507596 - 34507877
Alignment:
| Q |
1 |
tgtaatttgtttttcaattgttatttgggactctagaaagaaacttgtaaatcaagttcttttttgttttatgcaaatcaaatatctttctagttcacta |
100 |
Q |
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| T |
34507596 |
tgtaatttgtttttcaattgttatttgggactctagaaagaaacttgtaaatcaagttcttttttgttttatgcaaatcaaatatctttctagttcacta |
34507695 |
T |
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| Q |
101 |
cacttccctgctttatcttcttcttattagtactttttgttctacgtaataggtttgcctgtattgatttatctgaacttatctgcagacataaccaaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
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| T |
34507696 |
cacttccctgctttatcttcttcttattagtactttttgttctgcgtaataggtttgcctgtattgatttatttgaacttatctggagacataaccaaac |
34507795 |
T |
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| Q |
201 |
atttgtgagagtgtttgagcttaaaattaatattatgcttaagtgcattttttggactgattttggctaatatcattgttat |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34507796 |
atttgtgagagtgtttgagcttaaaattaatattatgcttaagtgcattttttggactgattttggctaatatcattgttat |
34507877 |
T |
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