View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14534_high_16 (Length: 246)

Name: NF14534_high_16
Description: NF14534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14534_high_16
NF14534_high_16
[»] chr8 (15 HSPs)
chr8 (18-160)||(23285992-23286134)
chr8 (17-141)||(23392453-23392577)
chr8 (171-246)||(18810483-18810558)
chr8 (171-246)||(18812668-18812743)
chr8 (171-246)||(43079347-43079422)
chr8 (171-246)||(43081722-43081797)
chr8 (179-246)||(14807556-14807624)
chr8 (171-246)||(27826782-27826857)
chr8 (171-246)||(27829093-27829168)
chr8 (192-246)||(3886365-3886419)
chr8 (170-246)||(12517489-12517566)
chr8 (171-236)||(44720617-44720683)
chr8 (171-246)||(15072506-15072582)
chr8 (179-246)||(15067785-15067853)
chr8 (179-246)||(28252050-28252118)
[»] chr4 (27 HSPs)
chr4 (166-246)||(16934639-16934719)
chr4 (171-246)||(16932285-16932360)
chr4 (171-246)||(7941133-7941208)
chr4 (171-246)||(9176960-9177035)
chr4 (171-246)||(11434769-11434844)
chr4 (169-246)||(22783242-22783319)
chr4 (171-246)||(5637931-5638006)
chr4 (171-246)||(22780877-22780952)
chr4 (171-246)||(9174610-9174684)
chr4 (171-246)||(3825036-3825112)
chr4 (171-246)||(11006705-11006781)
chr4 (173-246)||(51015042-51015115)
chr4 (171-246)||(36920050-36920125)
chr4 (179-246)||(24888598-24888666)
chr4 (179-239)||(37089846-37089906)
chr4 (171-246)||(38408993-38409069)
chr4 (169-246)||(36921958-36922035)
chr4 (173-246)||(22803196-22803270)
chr4 (171-246)||(48486113-48486189)
chr4 (179-246)||(52942931-52942999)
chr4 (171-246)||(22044855-22044930)
chr4 (171-246)||(18846923-18847001)
chr4 (171-246)||(22048500-22048575)
chr4 (171-216)||(8528918-8528963)
chr4 (194-246)||(22801303-22801356)
chr4 (171-246)||(31850062-31850138)
chr4 (168-216)||(47868192-47868240)
[»] chr7 (16 HSPs)
chr7 (171-246)||(1047428-1047503)
chr7 (171-246)||(3878322-3878398)
chr7 (171-246)||(2935070-2935145)
chr7 (171-246)||(9027612-9027687)
chr7 (171-246)||(40837186-40837261)
chr7 (171-246)||(26804345-26804421)
chr7 (171-246)||(22136878-22136953)
chr7 (171-246)||(40551905-40551980)
chr7 (171-246)||(22107867-22107942)
chr7 (171-246)||(40549627-40549702)
chr7 (170-246)||(27306692-27306768)
chr7 (168-246)||(1049737-1049816)
chr7 (171-246)||(35379-35455)
chr7 (171-246)||(18567363-18567439)
chr7 (170-246)||(25542280-25542356)
chr7 (171-246)||(31435510-31435586)
[»] chr3 (26 HSPs)
chr3 (171-246)||(38210067-38210142)
chr3 (170-246)||(50493675-50493751)
chr3 (171-246)||(7606888-7606963)
chr3 (171-246)||(53896679-53896754)
chr3 (171-246)||(22114767-22114842)
chr3 (171-246)||(35777163-35777238)
chr3 (171-246)||(18097346-18097422)
chr3 (171-246)||(18099631-18099707)
chr3 (171-246)||(6063931-6064006)
chr3 (172-246)||(5191374-5191449)
chr3 (170-246)||(38889756-38889833)
chr3 (171-216)||(25388618-25388663)
chr3 (168-216)||(3859314-3859362)
chr3 (171-246)||(11162891-11162966)
chr3 (171-238)||(6719584-6719651)
chr3 (170-246)||(32264505-32264581)
chr3 (171-216)||(6066246-6066291)
chr3 (171-246)||(32218836-32218912)
chr3 (171-246)||(11170145-11170220)
chr3 (171-238)||(48362119-48362186)
chr3 (179-246)||(10192454-10192521)
chr3 (171-246)||(26720268-26720344)
chr3 (171-238)||(1321161-1321228)
chr3 (183-246)||(5899471-5899534)
chr3 (179-246)||(10085534-10085601)
chr3 (171-216)||(5885983-5886028)
[»] chr1 (20 HSPs)
chr1 (171-246)||(47179428-47179503)
chr1 (171-246)||(6822775-6822850)
chr1 (171-246)||(47177078-47177153)
chr1 (171-246)||(13761577-13761652)
chr1 (179-246)||(16225895-16225962)
chr1 (171-246)||(51752104-51752179)
chr1 (171-246)||(51749778-51749853)
chr1 (171-246)||(10400293-10400369)
chr1 (170-246)||(20291279-20291355)
chr1 (171-246)||(23783238-23783313)
chr1 (198-246)||(16231368-16231416)
chr1 (171-246)||(20302198-20302273)
chr1 (170-246)||(15823285-15823362)
chr1 (191-246)||(6823643-6823698)
chr1 (173-246)||(38925922-38925996)
chr1 (171-240)||(14098441-14098510)
chr1 (170-238)||(39462257-39462325)
chr1 (171-246)||(47451405-47451481)
chr1 (179-246)||(28840426-28840494)
chr1 (171-235)||(49687301-49687365)
[»] chr5 (28 HSPs)
chr5 (171-246)||(34479897-34479972)
chr5 (171-246)||(34477557-34477632)
chr5 (163-246)||(39797841-39797924)
chr5 (161-246)||(25921917-25922002)
chr5 (171-246)||(2174680-2174755)
chr5 (171-246)||(31544798-31544873)
chr5 (171-235)||(21684905-21684969)
chr5 (171-246)||(10749505-10749580)
chr5 (168-246)||(18186511-18186590)
chr5 (171-246)||(31542442-31542517)
chr5 (171-246)||(10756960-10757035)
chr5 (171-246)||(15354990-15355065)
chr5 (171-246)||(15357266-15357341)
chr5 (171-246)||(38960529-38960604)
chr5 (179-246)||(4236378-4236446)
chr5 (170-242)||(23664833-23664905)
chr5 (170-242)||(23793682-23793754)
chr5 (171-242)||(23667109-23667180)
chr5 (171-246)||(659713-659789)
chr5 (171-246)||(20504376-20504452)
chr5 (171-216)||(31179888-31179933)
chr5 (171-246)||(36402769-36402845)
chr5 (171-246)||(38881845-38881920)
chr5 (171-246)||(21947770-21947846)
chr5 (171-246)||(16775897-16775973)
chr5 (171-246)||(20507925-20508001)
chr5 (171-239)||(31466428-31466496)
chr5 (171-235)||(12556377-12556441)
[»] chr6 (13 HSPs)
chr6 (171-246)||(14507641-14507716)
chr6 (171-246)||(33308685-33308760)
chr6 (171-246)||(33310954-33311029)
chr6 (171-246)||(26066536-26066611)
chr6 (171-246)||(26068807-26068882)
chr6 (171-246)||(29755204-29755279)
chr6 (179-246)||(11983491-11983558)
chr6 (170-246)||(1072319-1072396)
chr6 (170-246)||(8995254-8995331)
chr6 (170-246)||(9019701-9019778)
chr6 (170-216)||(4816740-4816787)
chr6 (169-235)||(15530597-15530663)
chr6 (171-246)||(19227873-19227948)
[»] chr2 (12 HSPs)
chr2 (171-246)||(45332600-45332675)
chr2 (179-246)||(19502475-19502542)
chr2 (171-246)||(24162677-24162752)
chr2 (171-246)||(36559283-36559358)
chr2 (171-246)||(36561602-36561677)
chr2 (170-246)||(19504809-19504885)
chr2 (179-246)||(43624009-43624077)
chr2 (179-246)||(27104523-27104590)
chr2 (171-246)||(40032510-40032586)
chr2 (171-246)||(21521158-21521234)
chr2 (174-235)||(6259290-6259351)
chr2 (171-246)||(42064231-42064307)
[»] scaffold0068 (1 HSPs)
scaffold0068 (171-235)||(28941-29005)
[»] scaffold0472 (1 HSPs)
scaffold0472 (171-246)||(5927-6002)
[»] scaffold0127 (1 HSPs)
scaffold0127 (171-246)||(12979-13054)
[»] scaffold0140 (2 HSPs)
scaffold0140 (171-246)||(21915-21990)
scaffold0140 (171-246)||(24190-24265)
[»] scaffold0025 (2 HSPs)
scaffold0025 (179-246)||(69757-69825)
scaffold0025 (179-246)||(73468-73536)
[»] scaffold0131 (1 HSPs)
scaffold0131 (172-240)||(14768-14837)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 23285992 - 23286134
Alignment:
Q  18 gaatatacttgccgtttctgaaatggtgcaagacgatatagccttcgtgcctctgaaatgtgcaacatgacaacatcaagaaattagttactacaacaaa 117  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||| ||||| |||||||||||||||| ||||||||||| | |||||||||||||||||    
T  23285992 gaatatacttgccttttctgaaatggtgcacgacgatataaccttggtgccactgaaatgtgcaacataacaacatcaagtatttagttactacaacaaa 23286091  T
Q  118 caagtttaggctttagaatgtaaatttaaatatggatgcttgc 160  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23286092 caagtttaggctttagaatgtaaatttaaatatggatgcttgc 23286134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 23392577 - 23392453
Alignment:
Q  17 agaatatacttgccgtttctgaaatggtgcaagacgatatagccttcgtgcctctgaaatgtgcaacatgacaacatcaagaaattagttactacaacaa 116  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  23392577 agaatatacttgccgtttctgaaatggtgcacgacgatataaccttggtgccactgaaatgtgcaacatgacaacatcaagaaattcattactacaacaa 23392478  T
Q  117 acaagtttaggctttagaatgtaaa 141  Q
    ||||||||||||||| |||||||||    
T  23392477 acaagtttaggcttttgaatgtaaa 23392453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 18810483 - 18810558
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18810483 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 18810558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 18812668 - 18812743
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18812668 tgtgagagttaacttaaaatcaggtttctgaagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 18812743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 43079347 - 43079422
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  43079347 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttt 43079422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 43081722 - 43081797
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  43081722 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaaagtggcacgatggaggttt 43081797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 14807556 - 14807624
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||| |||||||||    
T  14807556 ttaacttaaaatcaggtttctgcagaatcgtggcatgatggttgggcaacgtgacacgattggaggttt 14807624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 27826782 - 27826857
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||| | |||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  27826782 tgtgagagttaacttaaaatcaggat-ctgcaggaatcgtggcacgattgctgggcaacgtggcacgatggaggttt 27826857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 27829093 - 27829168
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||| | |||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  27829093 tgtgagagttaacttaaaatcaggat-ctgcaggaatcgtggcacgattgctgggcaacgtggcacgatggaggttt 27829168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 3886419 - 3886365
Alignment:
Q  192 aggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||||||||||||||| || || |||||| ||||||||||||||||||||||    
T  3886419 aggtttctgcagaatcgtgacatgatggctggacaacgtggcacgatggaggttt 3886365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 12517566 - 12517489
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| |||||||||||||||| | |||||| ||||||||||||| |||  ||||||||||||||| |||||||||    
T  12517566 atgtgagagttaacttaaaatcaggat-ctgcaggaatcgtggcacgatggcaaggcaacgtggcacgattggaggttt 12517489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 44720617 - 44720683
Alignment:
Q  171 tgtgagaattaacttaaaatcagg-tttctgcagaatcgtggcacgacggctgggcaacgtggcacg 236  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| ||  ||||||||  ||||||||    
T  44720617 tgtgagagttaacttaaaatcaggttttctgcagaatcgtggcatgattgctgggcattgtggcacg 44720683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 15072506 - 15072582
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| ||||||||||||||| || |||||| ||||||| ||||| |||||||||||||| ||||| |||||||||    
T  15072506 tgtgagagttaacttaaaatcagatt-ctgcaggaatcgtgacacgatggctgggcaacgtgacacgattggaggttt 15072582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 15067785 - 15067853
Alignment:
Q  179 ttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||| ||| ||||| |||||||||| || ||||||||||| |||||||| |||||||||    
T  15067785 ttaacttaaaatcagattt-tgcaggaatcgtggcaagatggctgggcaacatggcacgattggaggttt 15067853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 28252118 - 28252050
Alignment:
Q  179 ttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||||||||||| | |||||| ||||||||||||| |||| |||||||||| |||| |||||||||    
T  28252118 ttaacttaaaatcaggat-ctgcaggaatcgtggcacgatggctaggcaacgtggtacgattggaggttt 28252050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 16934719 - 16934639
Alignment:
Q  166 ataaatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16934719 ataaatgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacatggcacgatggaggttt 16934639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 16932360 - 16932285
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16932360 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 16932285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 7941133 - 7941208
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7941133 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttt 7941208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 9177035 - 9176960
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  9177035 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggttaggcaacgtggcacgatggaggttt 9176960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 11434769 - 11434844
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  11434769 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatggctgggcaacgtggcacgatggaggttt 11434844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 22783319 - 22783242
Alignment:
Q  169 aatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  22783319 aatgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttt 22783242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 5638006 - 5637931
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  5638006 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgatggaggttt 5637931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 22780952 - 22780877
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  22780952 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttt 22780877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 9174684 - 9174610
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  9174684 tgtgagagttaacttaaaatcaggtt-ctgcagaatcgtggcacgacggctaggcaacgtagcacgatggaggttt 9174610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 3825112 - 3825036
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||||    
T  3825112 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacatggcacgattggaggttt 3825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 11006781 - 11006705
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttc-tgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11006781 tgtgagagttaacttaaaatcaggttttatgcagaatcgtggcacgatcgctgggcaacgtggcacgatggaggttt 11006705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 51015042 - 51015115
Alignment:
Q  173 tgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||| ||||||||||||||| ||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  51015042 tgagagttaacttaaaatcagatttctgcagaatcgtggcatgatggcaaggcaacgtggcacgatggaggttt 51015115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 36920125 - 36920050
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  36920125 tgtgagagttaacttaaaatcaggtt-ctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 36920050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 24888598 - 24888666
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||| |||||||||||| ||||||||| |||| ||||||||||||||| |||||||||    
T  24888598 ttaacttaaaatcagatttctgcagaattgtggcacgatggctaggcaacgtggcacgattggaggttt 24888666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 37089906 - 37089846
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatg 239  Q
    ||||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||    
T  37089906 ttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatg 37089846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 38408993 - 38409069
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||  |||||||| |||||||||| |||||||||    
T  38408993 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggttt 38409069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 36922035 - 36921958
Alignment:
Q  169 aatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||| |||||||||||||||||| ||||| |||||||| |||| ||||||||||| |||||||| |||||||||    
T  36922035 aatgtgagagttaacttaaaatcaggtt-ctgcaaaatcgtggtacgatggctgggcaacatggcacgattggaggttt 36921958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 22803270 - 22803196
Alignment:
Q  173 tgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||| ||||||||||||||  |||||  |||||||||| |||| |||||||||||||||||||| |||||||||    
T  22803270 tgagagttaacttaaaatcaaatttctatagaatcgtggtacgatggctgggcaacgtggcacgattggaggttt 22803196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 48486113 - 48486189
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||  |||||||| ||||||||||| ||||| |||||||||||||| |||||||||    
T  48486113 tgtgagagttaacttaaaatcaggtc-ctgcagaaatcgtggcacgatggctgagcaacgtggcacgattggaggttt 48486189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 52942999 - 52942931
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||||||| |||| || ||||||||||| || ||||||||||||||||| |||||||||    
T  52942999 ttaacttaaaatcaggttt-tgcaaaaatcgtggcacgatggttgggcaacgtggcacgattggaggttt 52942931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 22044930 - 22044855
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| | | |||||| |||||||||||||  |  |||||||||||||||||||||||||    
T  22044930 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgattgaagggcaacgtggcacgatggaggttt 22044855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 18846923 - 18847001
Alignment:
Q  171 tgtgagaattaacttaaaatcaggttt--ctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| ||||||||||||||| |||  |||||||||||||||||||  | |||| | |||||||||| |||||||||    
T  18846923 tgtgagagttaacttaaaatcagatttttctgcagaatcgtggcacgattgttgggaatcgtggcacgattggaggttt 18847001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 22048575 - 22048500
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| | | |   |||||||||||||||  |  |||||||||||||||||||||||||    
T  22048575 tgtgagagttaacttaaaatcaagatccgcaagaatcgtggcacgattgaagggcaacgtggcacgatggaggttt 22048500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 8528918 - 8528963
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacga 216  Q
    ||||||| ||||||||||||||| |||||| ||||||||| |||||    
T  8528918 tgtgagagttaacttaaaatcagatttctggagaatcgtgtcacga 8528963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 22801356 - 22801303
Alignment:
Q  194 gtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||| |||||||||||||||| || ||||||||||| ||||| |||||||||    
T  22801356 gtttctacagaatcgtggcacgatggttgggcaacgtgacacgattggaggttt 22801303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 31850138 - 31850062
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||| | | |||||| ||| |||||||||  ||||||||||||||||||| |||||||||    
T  31850138 tgtgagagttaacttaaaatcaagat-ctgcaggaattgtggcacgattgctgggcaacgtggcacgattggaggttt 31850062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 47868192 - 47868240
Alignment:
Q  168 aaatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacga 216  Q
    |||||||||| |||||||||||||||  ||||| ||||||||| |||||    
T  47868192 aaatgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 47868240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 1047503 - 1047428
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1047503 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 1047428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 3878322 - 3878398
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 3878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 2935070 - 2935145
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  2935070 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttt 2935145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 9027687 - 9027612
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  9027687 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttt 9027612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 40837261 - 40837186
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||    
T  40837261 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggtcggacaacgtggcacgatggaggttt 40837186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 26804345 - 26804421
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||||    
T  26804345 tgtgagagttaacttaaaatcaggtttctacagaatcgtggcacgatggctgggcaacgtggtacgattggaggttt 26804421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 22136878 - 22136953
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||    
T  22136878 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttt 22136953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 40551905 - 40551980
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||    
T  40551905 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttt 40551980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 22107867 - 22107942
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||| ||||||    
T  22107867 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttt 22107942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 40549627 - 40549702
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||| ||||||    
T  40549627 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttt 40549702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 27306768 - 27306692
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| |||||||||||| |||||| |||| ||||||||||||| |||||| ||||||||||||| |||||||||    
T  27306768 atgtgagagttaacttaaaataaggttt-tgcaaaatcgtggcacgatggctggacaacgtggcacgattggaggttt 27306692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 1049816 - 1049737
Alignment:
Q  168 aaatgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||||| |||||||||||||| | | |||||| |||||||||||||  ||||||||||||||||||| |||||||||    
T  1049816 aaatgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgattgctgggcaacgtggcacgattggaggttt 1049737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 35379 - 35455
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||| | | |||||| |||||||||||||  ||| ||||||||||||||| |||||||||    
T  35379 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgattgctaggcaacgtggcacgattggaggttt 35455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 18567363 - 18567439
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| || ||||||||||||||| || ||||| |||||||||||  ||||||||| ||||||||| |||||||||    
T  18567363 tgtgagagttgacttaaaatcaggtt-ctacagaaatcgtggcacgatagctgggcaaagtggcacgattggaggttt 18567439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 25542280 - 25542356
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| |||||||||||||| | | |||||| |  |||||||||  ||||||||||||||||||| |||||||||    
T  25542280 atgtgagagttaacttaaaatcaagat-ctgcaggaatgtggcacgattgctgggcaacgtggcacgattggaggttt 25542356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 31435586 - 31435510
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| || ||||||||||||||| || ||||| |||||||||||  ||||||||| ||||||||| |||||||||    
T  31435586 tgtgagagttgacttaaaatcaggtt-ctacagaaatcgtggcacgatagctgggcaaagtggcacgattggaggttt 31435510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 38210067 - 38210142
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38210067 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 38210142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 50493675 - 50493751
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  50493675 atgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatagctgggcaacgtggcacgatggaggttt 50493751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 7606963 - 7606888
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  7606963 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacgtggcacgatggaggttt 7606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 53896754 - 53896679
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  53896754 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgattgctgggcaacgtggcacgatggaggttt 53896679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 22114842 - 22114767
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  22114842 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgatggttgggcaacgtggcacgatggaggttt 22114767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 35777163 - 35777238
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35777163 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgacagctgggcaacgtggcacgatggaggttt 35777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 18097422 - 18097346
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  18097422 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 18097346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 18099707 - 18099631
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  18099707 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 18099631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 6064006 - 6063931
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  6064006 tgtgagaattaacttaaaatcaggtttatgcagaatcgtggcacgatggcaaggcaacgtggcacaatggaggttt 6063931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 5191374 - 5191449
Alignment:
Q  172 gtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||| |||||||||    
T  5191374 gtgagagttaacttaaaatcagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggttt 5191449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 38889756 - 38889833
Alignment:
Q  170 atgtgagaattaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||||| |||||||||||| |||||| |||||||||||||| |||| |||  ||||||||||||||||||||||||    
T  38889756 atgtgagagttaacttaaaattaggttttctgcagaatcgtggtacgatggcaaggcaacgtggcacgatggaggttt 38889833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 25388618 - 25388663
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacga 216  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  25388618 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 25388663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 3859314 - 3859362
Alignment:
Q  168 aaatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacga 216  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  3859314 aaatgtgagagttaacttaaaatcaggtttctgcataatcgtggcacga 3859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 11162891 - 11162966
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| | | |||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  11162891 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgattgctgggcaacgtggcacgatggaggttt 11162966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 6719651 - 6719584
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgat 238  Q
    |||||||||||||||||||||||||||||||  |||||||||||||  |  ||||| |||||||||||    
T  6719651 tgtgagaattaacttaaaatcaggtttctgcttaatcgtggcacgattgaagggcatcgtggcacgat 6719584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 32264581 - 32264505
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||| |||||||||    
T  32264581 atgtgagagttaacttaaaatcaggttt-tgcagaaatcgtggcacgatggctggg-aacgtggcacgattggaggttt 32264505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 6066291 - 6066246
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacga 216  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  6066291 tgtgagagttaacttaaaatcaggtttctgcagaattgtggcacga 6066246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 32218836 - 32218912
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||| |  ||||||||||||||||| |||||||||    
T  32218836 tgtgagagttaacttaaaatcaggtt-ctgcagaaatcgtggcacgatgattgggcaacgtggcacgattggaggttt 32218912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 11170145 - 11170220
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| | | |||||| ||||||||||||   ||||||||||||||||||||||||||||    
T  11170145 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacggttgctgggcaacgtggcacgatggaggttt 11170220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 48362186 - 48362119
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacgat 238  Q
    ||||||| |||||||||||||||||| ||| |||| ||||||||||| || ||||||||||||||||||    
T  48362186 tgtgagagttaacttaaaatcaggtt-ctgtagaaatcgtggcacgatggttgggcaacgtggcacgat 48362119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 10192521 - 10192454
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||| |||||||| ||| ||| ||||||||||||||  ||  ||||||||||||||||||||||||    
T  10192521 ttaactgaaaatcagatttatgcggaatcgtggcacgatcgcaaggcaacgtggcacgatggaggttt 10192454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 26720268 - 26720344
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||| | |||||| ||||||||||||| ||||| ||||||||||| || |||||||||    
T  26720268 tgtgagagttaacttaaaatcaggat-ctgcaggaatcgtggcacgatggctgagcaacgtggcaggattggaggttt 26720344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 1321161 - 1321228
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgat 238  Q
    ||||||| |||||||||||||| | | |||||| |||||||||||||  ||||||||||||||||||||    
T  1321161 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgattgctgggcaacgtggcacgat 1321228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 5899471 - 5899534
Alignment:
Q  183 cttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||| ||||||||||||||| |||| ||||||||  |  |||||||||||||||||||| ||||    
T  5899471 cttataatcaggtttctgcataatcatggcacgattgaagggcaacgtggcacgatggatgttt 5899534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 10085601 - 10085534
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||| |||||||| ||| ||| ||||||||||| ||  ||  ||||||||||||||||||||||||    
T  10085601 ttaactgaaaatcagatttatgcggaatcgtggcatgatcgcaaggcaacgtggcacgatggaggttt 10085534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 5885983 - 5886028
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacga 216  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||    
T  5885983 tgtgagagttaacttaaaattaggtttttacagaatcgtggcacga 5886028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 47179428 - 47179503
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47179428 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 47179503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 6822775 - 6822850
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6822775 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttt 6822850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 47177078 - 47177153
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47177078 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacgactgggcaacgtggcacgatggaggttt 47177153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 13761577 - 13761652
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  13761577 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcatgatggaggttt 13761652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 16225895 - 16225962
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16225895 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggttgggcaacgtggcacgatggaggttt 16225962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 51752104 - 51752179
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  51752104 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttgggcaacgtggcacgatggaggttt 51752179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 51749778 - 51749853
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  51749778 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggttgggcaacgtggtacgatggaggttt 51749853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 10400369 - 10400293
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||    
T  10400369 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgattggaggttt 10400293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 20291279 - 20291355
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| |||  |||||||||||||| |||||||||    
T  20291279 atgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacggtggaggttt 20291355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 23783238 - 23783313
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||    
T  23783238 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttt 23783313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 16231368 - 16231416
Alignment:
Q  198 ctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16231368 ctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 16231416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 20302198 - 20302273
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| || |||  ||||||||||||||||||||||||    
T  20302198 tgtgagagttaacttaaaatcagatttctgcagaatcgcggcatgatggcaaggcaacgtggcacgatggaggttt 20302273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 15823285 - 15823362
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| |||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  15823285 atgtgagagttaacttaaaatcaggat-ctgcaggaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 15823362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 6823643 - 6823698
Alignment:
Q  191 caggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||    
T  6823643 caggtttttgcagaatcatggcacgatggttgggcaacgtggcacgatggaggttt 6823698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 38925996 - 38925922
Alignment:
Q  173 tgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||| |||||||||||||||||| | |||||| |||||| |||| |||||||||||||||||||| |||||||||    
T  38925996 tgagagttaacttaaaatcaggttcc-gcagaaatcgtggtacgatggctgggcaacgtggcacgattggaggttt 38925922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 14098510 - 14098441
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacgatgg 240  Q
    ||||||| ||||||||||||||| || |||||||| ||||||||||| ||||| ||| |||||||||||||    
T  14098510 tgtgagagttaacttaaaatcagatt-ctgcagaaatcgtggcacgatggctgagcaccgtggcacgatgg 14098441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 39462257 - 39462325
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgat 238  Q
    |||||||| |||||||||||||||| |||||||| ||||||| ||| | || ||||||||||||||||||    
T  39462257 atgtgagagttaacttaaaatcagg-ttctgcagaaatcgtgacacaatggttgggcaacgtggcacgat 39462325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 47451405 - 47451481
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| ||||||| ||||||| ||| ||||||| ||||||||||| |||||||||| ||||||||| |||||||||    
T  47451405 tgtgagagttaacttcaaatcagattt-tgcagaaatcgtggcacgatggctgggcaatgtggcacgattggaggttt 47451481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 28840426 - 28840494
Alignment:
Q  179 ttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||||||||||| | |||||| ||||||||||||| |||  ||||||||||||||| |||||||||    
T  28840426 ttaacttaaaatcaggat-ctgcaggaatcgtggcacgatggcaaggcaacgtggcacgattggaggttt 28840494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 49687301 - 49687365
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcac 235  Q
    ||||||| ||||||||||||||||||  || |||| |||||||| || ||||||||||||||||||    
T  49687301 tgtgagagttaacttaaaatcaggtta-tgtagaaatcgtggcatgatggctgggcaacgtggcac 49687365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 34479972 - 34479897
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34479972 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttt 34479897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 34477632 - 34477557
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34477632 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttt 34477557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 39797841 - 39797924
Alignment:
Q  163 aacataaatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  39797841 aacataactgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatggctgggcaacgtggcatgatggaggttt 39797924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 25922002 - 25921917
Alignment:
Q  161 ccaacataaatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  25922002 ccaacaaatatgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttggacaacgtggcacgatggaggttt 25921917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 2174680 - 2174755
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  2174680 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggttt 2174755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 31544798 - 31544873
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  31544798 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatagctgggcaacgtggcacgatggaggttt 31544873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 21684969 - 21684905
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcac 235  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21684969 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 21684905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 10749505 - 10749580
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  10749505 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttt 10749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 18186590 - 18186511
Alignment:
Q  168 aaatgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  18186590 aaatgtgagagttaacttaaaatcaagtttctgcagaatcgtggtacgatggctgggcaacgtggcacgattggaggttt 18186511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 31542442 - 31542517
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  31542442 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtgacacgatagctgggcaacgtggcacgatggaggttt 31542517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 10756960 - 10757035
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||  || ||||||||||||||||    
T  10756960 tgtgagagttaacttaaaatcaggtttctgcacaatcgtagcacgacggctgggcttcgcggcacgatggaggttt 10757035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 15355065 - 15354990
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||    
T  15355065 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttt 15354990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 15357341 - 15357266
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||    
T  15357341 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttt 15357266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 38960604 - 38960529
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||   | ||||||||||||||||    
T  38960604 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggctttgcggcacgatggaggttt 38960529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 4236378 - 4236446
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  4236378 ttaacttaaaatcagatttctgcagaattgtggcacgatggctgggcaacgtggcacgattggaggttt 4236446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 23664833 - 23664905
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggag 242  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||    
T  23664833 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggag 23664905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 23793754 - 23793682
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggag 242  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||    
T  23793754 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggag 23793682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 23667109 - 23667180
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggag 242  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||    
T  23667109 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggag 23667180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 659713 - 659789
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||| |||||||||    
T  659713 tgtgagagttaacttaaaatcaggtt-ctgcagaaatcgtggcacgatggctaggcaacgtggcacgattggaggttt 659789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 20504452 - 20504376
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||| |||||||||    
T  20504452 tgtgagagttaacttaaaatcaggtt-ctgcagaaatcgtggcacgatagctgggcaacgtggcacgattggaggttt 20504376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 31179933 - 31179888
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacga 216  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31179933 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 31179888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 36402845 - 36402769
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||| ||||||||||||||||  ||||||| ||||||||||| | |||||| |||||||||    
T  36402845 tgtgagagttaacttaaaattaggtttctgcagaatctaggcacgatggctgggcaacatagcacgattggaggttt 36402769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 38881845 - 38881920
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| | | |||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  38881845 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgattgctgggcaacgtggcacgatggaggttt 38881920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 21947770 - 21947846
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||| |||| ||||||||| ||||| |||||||||    
T  21947770 tgtgagagttaacttaaaatcaggtt-ctgcagaaatcgtggcacgatggctaggcaacgtgacacgattggaggttt 21947846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 16775897 - 16775973
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgca-gaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| |||  ||||||||| ||||| |||||||||    
T  16775897 tgtgagaattaacttaaaatcagg-atctgcaggaatcgtggcacgatggcaaggcaacgtgacacgattggaggttt 16775973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 20508001 - 20507925
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||  | |||||||||| |||||| |||||||||    
T  20508001 tgtgagagttaacttaaaatcagg-ttctgcagaaatcgtggcacgatagttgggcaacgtagcacgattggaggttt 20507925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 31466496 - 31466428
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgca-gaatcgtggcacgacggctgggcaacgtggcacgatg 239  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||  |  ||||||||||||||||||    
T  31466496 tgtgagagttaacttaaaatcaggttt-tgcaggaatcgtggcacgattgaagggcaacgtggcacgatg 31466428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 12556441 - 12556377
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcac 235  Q
    ||||||| |||| ||||||||||||| |||||||| ||||||||  | ||||||||||||||||||    
T  12556441 tgtgagagttaatttaaaatcaggtt-ctgcagaaatcgtggcataatggctgggcaacgtggcac 12556377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 14507716 - 14507641
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttt 14507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 33308685 - 33308760
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  33308685 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttt 33308760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 33310954 - 33311029
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  33310954 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttt 33311029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 26066611 - 26066536
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  26066611 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttt 26066536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 26068882 - 26068807
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  26068882 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcatgatggaggttt 26068807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 29755279 - 29755204
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  29755279 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttt 29755204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 11983558 - 11983491
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||| ||| |||||||||||||    
T  11983558 ttaacttaaaatcaggtttctgcagaatcgtggtacgatggttgggcaacatggtacgatggaggttt 11983491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 1072396 - 1072319
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| |||||||||||||||||| |||||||| |||||| |||| || ||||||||||||||||| |||||||||    
T  1072396 atgtgagagttaacttaaaatcaggtt-ctgcagaaatcgtggtacgatggttgggcaacgtggcacgattggaggttt 1072319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 8995254 - 8995331
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| |||||||||||||||| | ||| || ||||||||||||| |||||||||||||||||||| |||||||||    
T  8995254 atgtgagagttaacttaaaatcaggat-ctgtaggaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 8995331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 9019701 - 9019778
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    |||||||| |||||||||||||||| | ||| || ||||||||||||| |||||||||||||||||||| |||||||||    
T  9019701 atgtgagagttaacttaaaatcaggat-ctgtaggaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 9019778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 4816787 - 4816740
Alignment:
Q  170 atgtgagaattaacttaaaatcagg-tttctgcagaatcgtggcacga 216  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  4816787 atgtgagagttaacttaaaatcaggttttctgcagaatcgtggcacga 4816740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 15530663 - 15530597
Alignment:
Q  169 aatgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcac 235  Q
    ||||||||| |||||||||||||||| | |||||| ||||||||||||| ||||||| ||||||||||    
T  15530663 aatgtgagagttaacttaaaatcaggat-ctgcaggaatcgtggcacgatggctgggtaacgtggcac 15530597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 19227948 - 19227873
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||| | | | |||||| ||||||||||||| || |||||||||||||| |||||||||||    
T  19227948 tgtgagagttaacttaaaattaagat-ctgcaggaatcgtggcacgatggttgggcaacgtggcatgatggaggttt 19227873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 45332675 - 45332600
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  45332675 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgcggcacgatggaggttt 45332600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 19502542 - 19502475
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  19502542 ttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggttt 19502475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 24162752 - 24162677
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  24162752 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacaatggttgggcaacgtggcacgatggaggttt 24162677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 36559358 - 36559283
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  36559358 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttt 36559283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 36561677 - 36561602
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |  ||||||||||||||||    
T  36561677 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcacggcacgatggaggttt 36561602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 19504885 - 19504809
Alignment:
Q  170 atgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    |||||| | |||||||||||||||||||| |||||||| |||||||| |||  ||||||||||||||||||||||||    
T  19504885 atgtgaaagttaacttaaaatcaggtttcagcagaatcatggcacgatggcaaggcaacgtggcacgatggaggttt 19504809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 43624077 - 43624009
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||    
T  43624077 ttaacttaaaatcaggtttctgcagaatcatggcacgatggctgggcaacatggcacgattggaggttt 43624009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 27104523 - 27104590
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||||||||||| ||||||||||||||||||||||  |  |||||||||||||||||||||||||    
T  27104523 ttaacttaaaatcagatttctgcagaatcgtggcacgattgaagggcaacgtggcacgatggaggttt 27104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 40032586 - 40032510
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  40032586 tgtgagagttaacttaaaatcaggtt-ctgcagaaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 40032510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 21521234 - 21521158
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  21521234 tgtgagagttaacttaaaatcaggtt-ctacaggaatcgtggcacgatggctgggcaacgtggcacgattggaggttt 21521158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 6259351 - 6259290
Alignment:
Q  174 gagaattaacttaaaatcaggtttctgcagaa-tcgtggcacgacggctgggcaacgtggcac 235  Q
    |||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  6259351 gagagttaacttaaaatcaggtt-ctgcagaaatcgtggcacgatggctgtgcaacgtggcac 6259290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 42064231 - 42064307
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||| |||||||||||||| | | |||||| |||||||||||||  |||||||||||||| |||| |||||||||    
T  42064231 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgattgctgggcaacgtggtacgactggaggttt 42064307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 28941 - 29005
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcac 235  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28941 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 29005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 5927 - 6002
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  5927 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttt 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 13054 - 12979
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||    
T  13054 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgtcaaggcaacgtggcacgatggaggttt 12979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 21915 - 21990
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||    
T  21915 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttt 21990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 24190 - 24265
Alignment:
Q  171 tgtgagaattaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttt 246  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||    
T  24190 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttt 24265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 69825 - 69757
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  69825 ttaacttaaaatcagatttctgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggttt 69757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 73536 - 73468
Alignment:
Q  179 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacga-tggaggttt 246  Q
    ||||||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  73536 ttaacttaaaatcagatttatgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggttt 73468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 14768 - 14837
Alignment:
Q  172 gtgagaattaacttaaaatcaggtttctgca-gaatcgtggcacgacggctgggcaacgtggcacgatgg 240  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||||  |  ||||||||||| |||||||    
T  14768 gtgagagttaacttaaaatcaggattctgcaggaatcgtggcacgattgaagggcaacgtggaacgatgg 14837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University