View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14534_high_6 (Length: 439)
Name: NF14534_high_6
Description: NF14534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14534_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 35311093 - 35311527
Alignment:
| Q |
1 |
aataaataactctaatagacaacnnnnnnnccctcgagcatgaaacctgtcagaagaattcaacaatggctggtcctcaccaaaaataactatagatatt |
100 |
Q |
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| T |
35311093 |
aataaataactctaatagacaacaaaaaaaccctcgagcatgaaacctgtcagaagaattcaacaatggctggtcctcaccaaaaataactatagatatt |
35311192 |
T |
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| Q |
101 |
gtatacgaggtagattttaacaagaaaaatttgaaaatgacatatatatggttttagttaaacacacgggagttggaagaacaaatgtaattcaaaattt |
200 |
Q |
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| T |
35311193 |
gtatacgaggtagattttaacaagaaaaatttgaaaatgacatatatatggttttagttaaacacacgggagttggtagaacaaatttaattcaaaattt |
35311292 |
T |
|
| Q |
201 |
taatcatcggttagaattcactttgataattatacacaaattaaaggactaatttatatataaaatttaggtcttttaatggttaatttagataattact |
300 |
Q |
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| T |
35311293 |
taatcatcggttagaattcactttgataattatacacaaattaaaggactaatttatatataaaatttaggtcttttaatggttaatttagataattact |
35311392 |
T |
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| Q |
301 |
ttgtgcatgattgcaattatagatcaacttttagcttagatgacaaaatttttatagctaaattaatatctaaagtagttattggtgagagatcagcgta |
400 |
Q |
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| T |
35311393 |
ttgtgcatgattgcaattatagatcaacttttcgtttagatgacaaattttttatagctaaattaatatctaaagtagttattggtgagagatcagcgta |
35311492 |
T |
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| Q |
401 |
taatatggcttgacatatccttaagatattcttcg |
435 |
Q |
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| T |
35311493 |
caatatggcctgacatatccttaagatattgttcg |
35311527 |
T |
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