View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14534_low_23 (Length: 237)
Name: NF14534_low_23
Description: NF14534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14534_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 31163005 - 31163224
Alignment:
| Q |
2 |
acatatataacaatattagagtttagtggttgggaaattgaaaggtggtagaatataagtggttggggtgtagagtttagtttggattctacatgatgaa |
101 |
Q |
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| T |
31163005 |
acatatataacaatattagagtttagtggttgggaaattgaaaggtggtagaatataagtggttggggtgtagagtttagtttggattctacatgatgaa |
31163104 |
T |
|
| Q |
102 |
gaatcagtagaaagaaagagtagattgacatttgtaggaaagtattagctaaccttctaagcttgagcagttaataagcacaaattgatcttccctatga |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31163105 |
gaatcagtagaaagaaagagtagattgacatttgtaggaaagtattagctaaccttctaagcttgagcagttaataagcacaaattgatcttccctatga |
31163204 |
T |
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| Q |
202 |
gtcataggctatgaccctat |
221 |
Q |
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|||||||||||||||||||| |
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| T |
31163205 |
gtcataggctatgaccctat |
31163224 |
T |
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