View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14534_low_24 (Length: 233)

Name: NF14534_low_24
Description: NF14534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14534_low_24
NF14534_low_24
[»] chr1 (31 HSPs)
chr1 (8-228)||(31162727-31162947)
chr1 (90-212)||(1138572-1138694)
chr1 (90-207)||(1486418-1486533)
chr1 (8-207)||(4621237-4621436)
chr1 (8-207)||(32729543-32729741)
chr1 (8-212)||(24122016-24122220)
chr1 (8-212)||(24674386-24674590)
chr1 (8-207)||(15059402-15059601)
chr1 (90-191)||(19034468-19034569)
chr1 (8-207)||(30677174-30677373)
chr1 (64-187)||(37047010-37047133)
chr1 (8-212)||(7766727-7766931)
chr1 (90-199)||(25237071-25237180)
chr1 (37-212)||(7946837-7947011)
chr1 (119-207)||(24216976-24217064)
chr1 (115-207)||(29057444-29057536)
chr1 (8-194)||(7578420-7578606)
chr1 (119-206)||(46113513-46113600)
chr1 (78-208)||(17447271-17447401)
chr1 (13-206)||(18646852-18647045)
chr1 (104-212)||(88378-88486)
chr1 (81-212)||(8077640-8077771)
chr1 (8-143)||(9500355-9500490)
chr1 (8-212)||(40802069-40802271)
chr1 (8-207)||(46607808-46608007)
chr1 (169-207)||(47091688-47091726)
chr1 (80-177)||(20999235-20999332)
chr1 (9-97)||(17935877-17935965)
chr1 (151-211)||(26608176-26608235)
chr1 (169-205)||(32930749-32930785)
chr1 (8-143)||(45859043-45859178)
[»] chr5 (24 HSPs)
chr5 (8-207)||(19145412-19145610)
chr5 (8-213)||(32059440-32059645)
chr5 (8-212)||(27498731-27498935)
chr5 (8-212)||(11926501-11926706)
chr5 (8-207)||(8484661-8484860)
chr5 (8-213)||(15641106-15641310)
chr5 (85-207)||(36895423-36895545)
chr5 (119-212)||(1827641-1827734)
chr5 (115-212)||(13038561-13038658)
chr5 (8-204)||(38684209-38684404)
chr5 (8-135)||(19456211-19456337)
chr5 (8-55)||(7085626-7085673)
chr5 (8-59)||(10837442-10837493)
chr5 (8-59)||(24158166-24158217)
chr5 (8-59)||(33737888-33737938)
chr5 (8-216)||(30485817-30486025)
chr5 (8-94)||(35425124-35425210)
chr5 (169-211)||(42006787-42006829)
chr5 (169-206)||(3715070-3715107)
chr5 (8-60)||(10631289-10631341)
chr5 (8-143)||(18207269-18207404)
chr5 (149-185)||(21040553-21040589)
chr5 (164-212)||(25343232-25343280)
chr5 (8-207)||(34310140-34310339)
[»] chr8 (29 HSPs)
chr8 (8-207)||(3734623-3734822)
chr8 (8-207)||(34237655-34237854)
chr8 (8-212)||(4718642-4718846)
chr8 (8-213)||(20305904-20306109)
chr8 (8-213)||(21092537-21092742)
chr8 (9-206)||(28193477-28193674)
chr8 (85-214)||(11956133-11956262)
chr8 (76-207)||(24339691-24339823)
chr8 (9-207)||(15259407-15259605)
chr8 (85-207)||(34639284-34639405)
chr8 (8-157)||(18128565-18128714)
chr8 (8-220)||(39349245-39349457)
chr8 (8-207)||(2618188-2618387)
chr8 (8-143)||(8765526-8765661)
chr8 (73-207)||(27746400-27746534)
chr8 (85-207)||(22200637-22200758)
chr8 (91-207)||(34694659-34694775)
chr8 (120-199)||(11714931-11715010)
chr8 (8-97)||(2639411-2639500)
chr8 (8-216)||(32879272-32879480)
chr8 (73-213)||(3403567-3403707)
chr8 (8-96)||(10292167-10292255)
chr8 (8-96)||(21603343-21603431)
chr8 (119-207)||(28964035-28964123)
chr8 (101-207)||(8387537-8387643)
chr8 (138-200)||(33585757-33585819)
chr8 (8-54)||(33747037-33747083)
chr8 (85-203)||(41070767-41070885)
chr8 (151-207)||(24066553-24066609)
[»] chr4 (23 HSPs)
chr4 (8-207)||(40058852-40059051)
chr4 (8-207)||(34844758-34844957)
chr4 (9-207)||(52983617-52983815)
chr4 (82-208)||(41085023-41085149)
chr4 (8-212)||(33696279-33696483)
chr4 (8-203)||(27528795-27528990)
chr4 (8-207)||(32986195-32986394)
chr4 (8-143)||(34723861-34723996)
chr4 (85-194)||(12710190-12710299)
chr4 (73-207)||(33992624-33992758)
chr4 (8-207)||(5609202-5609401)
chr4 (85-206)||(9646293-9646414)
chr4 (8-207)||(25852212-25852412)
chr4 (8-207)||(46714390-46714590)
chr4 (169-214)||(43719226-43719271)
chr4 (92-212)||(41621680-41621800)
chr4 (8-207)||(54127342-54127541)
chr4 (112-191)||(7093390-7093469)
chr4 (102-135)||(16339715-16339748)
chr4 (8-212)||(18875517-18875720)
chr4 (73-133)||(10125892-10125952)
chr4 (109-189)||(45302855-45302935)
chr4 (167-211)||(45787862-45787906)
[»] chr3 (43 HSPs)
chr3 (8-207)||(8456150-8456349)
chr3 (8-207)||(30257622-30257821)
chr3 (8-212)||(35492904-35493108)
chr3 (8-212)||(49258262-49258466)
chr3 (8-207)||(40133449-40133648)
chr3 (8-207)||(45529755-45529953)
chr3 (137-211)||(27887422-27887496)
chr3 (8-212)||(4462626-4462829)
chr3 (8-212)||(40940818-40941022)
chr3 (8-212)||(46576341-46576545)
chr3 (8-207)||(34492575-34492774)
chr3 (8-143)||(39041852-39041987)
chr3 (8-207)||(48977386-48977585)
chr3 (8-207)||(50731237-50731432)
chr3 (8-207)||(50781422-50781617)
chr3 (8-207)||(53424177-53424375)
chr3 (8-143)||(1178234-1178367)
chr3 (120-207)||(4252508-4252595)
chr3 (8-213)||(30807153-30807358)
chr3 (8-201)||(15566500-15566692)
chr3 (77-187)||(34844396-34844506)
chr3 (8-204)||(26174114-26174310)
chr3 (8-212)||(45272416-45272620)
chr3 (102-207)||(50582990-50583095)
chr3 (8-207)||(25289715-25289913)
chr3 (8-207)||(52455649-52455848)
chr3 (151-206)||(27812011-27812066)
chr3 (8-206)||(52821636-52821833)
chr3 (8-141)||(10083819-10083952)
chr3 (8-201)||(32151428-32151621)
chr3 (169-206)||(11390601-11390638)
chr3 (101-214)||(26158809-26158922)
chr3 (8-143)||(8097279-8097414)
chr3 (151-207)||(36660768-36660824)
chr3 (8-207)||(51532787-51532986)
chr3 (8-143)||(53233911-53234045)
chr3 (8-55)||(4048100-4048147)
chr3 (9-96)||(48104986-48105073)
chr3 (8-141)||(10190742-10190875)
chr3 (104-206)||(55371381-55371483)
chr3 (8-96)||(8958035-8958124)
chr3 (8-212)||(21362936-21363140)
chr3 (161-206)||(33417975-33418020)
[»] chr6 (23 HSPs)
chr6 (8-215)||(9208242-9208449)
chr6 (10-189)||(17149458-17149637)
chr6 (8-207)||(15360098-15360297)
chr6 (8-205)||(11448871-11449068)
chr6 (8-203)||(9690638-9690833)
chr6 (9-207)||(9238973-9239171)
chr6 (8-126)||(14504082-14504200)
chr6 (8-212)||(34147339-34147543)
chr6 (8-212)||(34159955-34160159)
chr6 (8-212)||(21148511-21148714)
chr6 (8-212)||(3222636-3222838)
chr6 (8-212)||(11007158-11007362)
chr6 (8-212)||(28672060-28672264)
chr6 (35-213)||(33499466-33499645)
chr6 (8-207)||(1344935-1345132)
chr6 (73-206)||(10377714-10377847)
chr6 (8-143)||(654146-654281)
chr6 (121-201)||(3907545-3907625)
chr6 (8-207)||(21982321-21982519)
chr6 (109-207)||(8479310-8479408)
chr6 (8-89)||(14212998-14213079)
chr6 (169-214)||(22576058-22576103)
chr6 (76-207)||(12591635-12591766)
[»] chr7 (38 HSPs)
chr7 (101-206)||(37056217-37056322)
chr7 (8-207)||(2751273-2751472)
chr7 (8-207)||(21217833-21218032)
chr7 (8-207)||(21574102-21574302)
chr7 (8-207)||(22119890-22120089)
chr7 (8-207)||(40542910-40543109)
chr7 (8-206)||(28646972-28647170)
chr7 (8-212)||(18044104-18044308)
chr7 (8-207)||(7275279-7275478)
chr7 (8-207)||(23330739-23330938)
chr7 (9-207)||(19421233-19421431)
chr7 (8-206)||(27312155-27312353)
chr7 (8-206)||(7262220-7262416)
chr7 (101-207)||(12211628-12211734)
chr7 (8-212)||(17196950-17197154)
chr7 (119-212)||(22696317-22696410)
chr7 (8-207)||(2103057-2103254)
chr7 (8-207)||(7175862-7176061)
chr7 (73-211)||(1469110-1469248)
chr7 (8-209)||(23012508-23012709)
chr7 (92-206)||(47541387-47541500)
chr7 (9-96)||(32849704-32849791)
chr7 (149-211)||(1357175-1357237)
chr7 (8-212)||(10091185-10091388)
chr7 (8-53)||(22299958-22300003)
chr7 (8-207)||(2344301-2344500)
chr7 (81-125)||(32087194-32087238)
chr7 (172-212)||(38864610-38864650)
chr7 (120-207)||(7799944-7800031)
chr7 (8-55)||(22696475-22696522)
chr7 (169-211)||(13332584-13332626)
chr7 (169-207)||(21370599-21370637)
chr7 (169-207)||(28089818-28089856)
chr7 (8-58)||(28089970-28090020)
chr7 (169-207)||(31713056-31713094)
chr7 (8-200)||(42913513-42913705)
chr7 (8-143)||(654705-654839)
chr7 (8-96)||(3851870-3851958)
[»] chr2 (23 HSPs)
chr2 (8-212)||(30466830-30467034)
chr2 (8-207)||(8192352-8192550)
chr2 (8-143)||(35171862-35171997)
chr2 (8-207)||(36390569-36390765)
chr2 (8-176)||(6006890-6007057)
chr2 (8-211)||(17324760-17324961)
chr2 (8-206)||(41329842-41330039)
chr2 (81-199)||(3405225-3405343)
chr2 (77-203)||(4618754-4618880)
chr2 (8-143)||(13266552-13266686)
chr2 (8-207)||(15037957-15038156)
chr2 (8-207)||(33827573-33827772)
chr2 (8-207)||(44946053-44946252)
chr2 (81-207)||(14946777-14946904)
chr2 (8-201)||(19605846-19606038)
chr2 (8-132)||(28668946-28669070)
chr2 (8-96)||(31778140-31778228)
chr2 (97-188)||(19525485-19525576)
chr2 (8-188)||(5394034-5394214)
chr2 (8-41)||(8299859-8299892)
chr2 (8-212)||(11941210-11941414)
chr2 (184-212)||(4852551-4852579)
chr2 (149-189)||(8024811-8024851)
[»] scaffold0576 (1 HSPs)
scaffold0576 (8-207)||(5082-5281)
[»] scaffold0051 (1 HSPs)
scaffold0051 (8-207)||(52871-53070)
[»] scaffold0623 (1 HSPs)
scaffold0623 (8-208)||(1057-1256)
[»] scaffold0366 (2 HSPs)
scaffold0366 (8-208)||(9300-9499)
scaffold0366 (73-208)||(12065-12200)
[»] scaffold0070 (1 HSPs)
scaffold0070 (8-207)||(40323-40521)
[»] scaffold0160 (1 HSPs)
scaffold0160 (8-206)||(29143-29340)
[»] scaffold0019 (1 HSPs)
scaffold0019 (8-143)||(161871-162006)
[»] scaffold0459 (1 HSPs)
scaffold0459 (8-208)||(10695-10893)
[»] scaffold1175 (1 HSPs)
scaffold1175 (8-96)||(2426-2514)
[»] scaffold0049 (1 HSPs)
scaffold0049 (8-96)||(66863-66951)
[»] scaffold0026 (1 HSPs)
scaffold0026 (8-207)||(97366-97565)
[»] scaffold0016 (1 HSPs)
scaffold0016 (8-96)||(32397-32484)
[»] scaffold0199 (1 HSPs)
scaffold0199 (169-214)||(8568-8613)
[»] scaffold0079 (1 HSPs)
scaffold0079 (102-135)||(53112-53145)
[»] scaffold0068 (1 HSPs)
scaffold0068 (8-212)||(41645-41848)


Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 31162947 - 31162727
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31162947 aaaactcggtatccgattcaaggatcgactaattagagatgaccaatctcactgctcacttgtgtgggccccatttaaagctagagcaaagcactgtatg 31162848  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31162847 tacctgtccaccgaaattggtaccagagtgaatcgagcctaaaaccttaagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 31162748  T
Q  208 agttattgtccaatttctttt 228  Q
    ||||||| |||||||||||||    
T  31162747 agttattttccaatttctttt 31162727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 1138694 - 1138572
Alignment:
Q  90 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 189  Q
    |||||||||| ||||||| ||||||||| ||||||||| || |||| || |||| ||||| |||||||||| | |||| ||||||||||||| |||||||    
T  1138694 agagcaaagctctgtatggacttgtccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaacca 1138595  T
Q  190 ctaggtcaaccccaaatgagtta 212  Q
    |||||||||||||||||| ||||    
T  1138594 ctaggtcaaccccaaatgggtta 1138572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 1486533 - 1486418
Alignment:
Q  90 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 189  Q
    |||||||||| ||||||| ||||  ||||||||||||| |||| || ||||||| ||| | |||||||||| | |||  ||||||||| ||| |||||||    
T  1486533 agagcaaagctctgtatggacttacccatcgaaattggcaccaaagggaatcgaacctgagaccttgagagtagcac--tccaagatcccaagccaacca 1486436  T
Q  190 ctaggtcaaccccaaatg 207  Q
    ||||||||||||||||||    
T  1486435 ctaggtcaaccccaaatg 1486418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 4621237 - 4621436
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | || |||| |||||||| ||||| |||| |||||||    
T  4621237 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagc-aagctctgtatg 4621335  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  4621336 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 4621435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 32729741 - 32729543
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| ||| || | |||||||  || ||| ||||| |||  | |||||  | || ||||||||||||| ||||||| || |||||||    
T  32729741 aaaactcggtatccgatccaaagaccgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaa-gctctgtatg 32729643  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     ||||| ||| ||||||||| |||| || ||||||| ||| | || ||||||| | || | || |||||| ||| |||||||||||| ||||||||||||    
T  32729642 gacttgcccaccgaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatg 32729543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 24122220 - 24122016
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | | ||||| |||||||| ||||| |||| |||||||    
T  24122220 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatg 24122122  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || |  |||||||| ||| |||||||||| | |||||||||||    
T  24122121 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaat 24122022  T
Q  207 gagtta 212  Q
    ||||||    
T  24122021 gagtta 24122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 24674590 - 24674386
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||| |||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  24674590 aaaattcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 24674492  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  24674491 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 24674392  T
Q  207 gagtta 212  Q
    | ||||    
T  24674391 gggtta 24674386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 15059402 - 15059601
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||  ||| |||||||||||||  | |||||  | || |||| |||||||| ||||| |||| |||||||    
T  15059402 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagc-aagctctgtatg 15059500  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||  ||| |||||||||||| |||||||||||    
T  15059501 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaat 15059600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 19034468 - 19034569
Alignment:
Q  90 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 189  Q
    |||||||||| ||||||| ||||| ||| ||||||||| |||||||  |||||| ||| |||||||  ||| |||| | ||||||||| |||||||||||    
T  19034468 agagcaaagctctgtatggacttgcccaccgaaattggcaccagagataatcgaacctgaaaccttttgaggaacaaactccaagatcccaaaccaacca 19034567  T
Q  190 ct 191  Q
    ||    
T  19034568 ct 19034569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 30677373 - 30677174
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| |||||| | |||| | | ||||||| ||| ||||||||| |||  | |||||  | ||| |||||||||||| | ||||| || |||||||    
T  30677373 aaaactcgatatccggtccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaa-gctctgtatg 30677275  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||| | ||| | |||||  ||| | || | ||| ||||| ||||||||||||||||||||||||||||    
T  30677274 gacttagcccaccgaaattggcaccagagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaat 30677175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 37047133 - 37047010
Alignment:
Q  64 cacttttgtgggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaa 163  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| ||| | ||| | ||||| ||||||| | ||||| | ||| | |||||||||| |     
T  37047133 cacttgtgggggccccatttaaagctagagcaaagctctgtatggactagcccaccaaaatttgtaccagggggaatcaaacctgagaccttgagaggag 37047034  T
Q  164 cacaatccaagatctcaaaccaac 187  Q
    |||| |||||| || ||| |||||    
T  37047033 cacactccaaggtcccaagccaac 37047010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 7766727 - 7766931
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||  ||||| |||| |||||||    
T  7766727 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagc-aagctctgtatg 7766825  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||| | ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| | |||||||||| ||||||| |||    
T  7766826 gacttagcccaccgaaattagcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccccgaat 7766925  T
Q  207 gagtta 212  Q
    | ||||    
T  7766926 gggtta 7766931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 25237071 - 25237180
Alignment:
Q  90 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 189  Q
    |||||||| | ||||||| ||||| ||| ||||||||| || |||| ||||||| ||| | |||||||||||| || | ||||||||| ||||| |||||    
T  25237071 agagcaaaactctgtatggacttgcccaccgaaattggcactagagggaatcgaacctgagaccttgagagaagcaaactccaagatcccaaactaacca 25237170  T
Q  190 ctaggtcaac 199  Q
     |||| ||||    
T  25237171 ttaggccaac 25237180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 212
Target Start/End: Complemental strand, 7947011 - 7946837
Alignment:
Q  37 taatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagag 135  Q
    ||||| ||| ||||||||||||| || |||||  | |||||||||||||||| ||||||| || ||||||  |||| | ||| ||||||||| |||||||    
T  7947011 taatctgaggggaccaatctcaccacccacttgcg-gggccccatttaaagcgagagcaa-gctctgtatagacttagcccaccgaaattggcaccagag 7946914  T
Q  136 tgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 212  Q
     ||||||| | | | ||||   ||| | || | | ||||||||||| |||||||||||||| |||||||||| ||||    
T  7946913 ggaatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactaggtcgaccccaaatgggtta 7946837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 24217064 - 24216976
Alignment:
Q  119 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||||||| |||| ||  |||||| ||| | |||||||||| | |||| ||||||||| |||  ||||||||||||||||||||||||    
T  24217064 cgaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaatg 24216976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 29057444 - 29057536
Alignment:
Q  115 ccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||||||||||| || |||| ||||||| ||| | |||||  ||| | || | ||||||||| |||||||||||||||| ||||||||||||    
T  29057444 ccatcgaaattggcacaagagggaatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatg 29057536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 7578606 - 7578420
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||  ||||||||||| ||| | ||||||| ||| || |||||  | ||||||| |||||||  ||||| ||||  ||||||    
T  7578606 aaaactcggtatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagc-aagctttgtatg 7578508  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactagg 194  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | ||||   ||| |||| | ||||||||| ||| ||||||||||||    
T  7578507 gacttagcccaccgaaattggcaccatagggaatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactagg 7578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 46113513 - 46113600
Alignment:
Q  119 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
    ||||||||||||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||||||||||||||| |||||||||||    
T  46113513 cgaaattggtaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 208
Target Start/End: Complemental strand, 17447401 - 17447271
Alignment:
Q  78 ccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatc 177  Q
    ||||||||| | ||||||| ||  |||||| | |||||||   ||||||| ||||||| ||||| | ||  | ||||| |||||| |||| |||||||||    
T  17447401 ccatttaaatccagagcaaggctttgtatggaattgtccactaaaattggcaccagagagaatcaaaccagagaccttcagagaagcacactccaagatc 17447302  T
Q  178 tcaaaccaaccactaggtcaaccccaaatga 208  Q
    ||||| |||||| | || |||||||||||||    
T  17447301 tcaaatcaaccattgggccaaccccaaatga 17447271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 18647045 - 18646852
Alignment:
Q  13 tcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgtactt 112  Q
    ||||||||||||||||| ||| ||||||  ||| ||| |||||||||  | |||||    |||| || |||||||| |||||||| |  |||||  ||||    
T  18647045 tcggtatccgattcaagaatcgactaattcgaggggatcaatctcaccgcccacttacaggggctccgtttaaagccagagcaaa-ctttgtatagactt 18646947  T
Q  113 -gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||||| || | || |||||| ||| ||||||||||||||||||||||||    
T  18646946 agcccaccgaaattggcaccagagagaatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaaccccaaat 18646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 88486 - 88378
Alignment:
Q  104 tatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 203  Q
    |||| ||||||||||||||||||  ||||||   |||| | |||||||| || |||| | |||| ||||| ||||||  |||||||||| ||||| || |    
T  88486 tatgaacttgtccatcgaaattgacaccagaagaaatcaaacctaaaactttaagagtagcacactccaaaatctcattccaaccactaagtcaatccta 88387  T
Q  204 aatgagtta 212  Q
    |||||||||    
T  88386 aatgagtta 88378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 8077771 - 8077640
Alignment:
Q  81 tttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctc 179  Q
    |||||||| ||||||| || ||||||| |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |    
T  8077771 tttaaagccagagcaa-gctctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatccc 8077673  T
Q  180 aaaccaaccactaggtcaaccccaaatgagtta 212  Q
    || |||||||||||| |||||||||||| ||||    
T  8077672 aagccaaccactaggccaaccccaaatgggtta 8077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 9500355 - 9500490
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| |||||||| |||| ||| ||||||| ||   ||||||||||||  | ||||| || |||| || |||||||| ||||| |||| |||||||    
T  9500355 aaaactcgatatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagc-aagctctgtatg 9500453  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  9500454 gacttagcccaccgaaattggcaccagagagaatcga 9500490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 40802069 - 40802271
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||| ||||||||| ||| ||||||   |||||||||||||||| || |||||  | ||| ||| |||||||  ||||| |||| |||||||    
T  40802069 aaaactcggtattcgattcaagaatcgactaattctagaggaccaatctcaccacccacttgcg-gggacccgtttaaagtcagagc-aagctctgtatg 40802166  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     |||||  |||| ||||||| ||||  | ||||| | | | | |||||||||  | || | ||||| ||||||| |||||||| | | ||||||||||||    
T  40802167 gacttgctcatcaaaattggcaccatggagaatcaaacatgagaccttgagatgagcaaactccaatatctcaagccaaccacaaagccaaccccaaatg 40802266  T
Q  208 agtta 212  Q
     ||||    
T  40802267 ggtta 40802271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 46608007 - 46607808
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| |||||||| |||||| | ||||||| ||| ||| ||||| |||  | |||||  | |||  || |||||||  ||||||| || |||||||    
T  46608007 aaaactcgatatccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgcgggggggccttttaaagtcagagcaa-gctctgtatg 46607909  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| |||  ||||||||||| |||||||||||    
T  46607908 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 46607809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 47091726 - 47091688
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  47091726 tccaagatctcaagccaaccactaggccaaccccaaatg 47091688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 20999235 - 20999332
Alignment:
Q  80 atttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatc 177  Q
    ||||||||| || | ||||| ||||||| ||| | ||| |||||||||||||| || |||| |||||| | | ||||||| || |||| |||||||||    
T  20999235 atttaaagccagcgtaaagctctgtatggactagcccaccgaaattggtaccacagagaattgagcctgagatcttgagaaaagcacactccaagatc 20999332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 17935965 - 17935877
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaa 97  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||   | |||||  | ||||||| |||||||| ||||||||    
T  17935965 aaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagccagagcaaa 17935877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 26608235 - 26608176
Alignment:
Q  151 accttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 211  Q
    |||||||||| | |||||| ||||||| |||  ||||||||||| ||||||||||||||||    
T  26608235 accttgagaggagcacaattcaagatc-caattcaaccactaggccaaccccaaatgagtt 26608176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 32930785 - 32930749
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
    ||||||||  |||||||||||||||||||||||||||    
T  32930785 tccaagattccaaaccaaccactaggtcaaccccaaa 32930749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 45859043 - 45859178
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||| |||||||||||| |||  ||||||||||| ||| |||||||||  || || |||||  | ||||||  |||||||| ||||| ||||  ||||||    
T  45859043 aaaattcggtatccgatccaataatcaactaatccgaggggaccaatcctaccacccacttgcgggggccctgtttaaagcaagagc-aagcgatgtatg 45859141  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  45859142 gacttagcccaccgaaattggcaccagagggaatcga 45859178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 19145412 - 19145610
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| | ||||||||| ||| ||||||||| |||  | |||||  | ||| || ||||||||| |||||||||| |||||||    
T  19145412 aaaactcggtatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggacc-atttaaagccagagcaaagctctgtatg 19145510  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     ||||| ||| ||||||||| ||||||| ||||||| ||  | |||||||||| | || | ||||||||| |||  ||||||||||| ||||||||||||    
T  19145511 gacttgcccaccgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaatg 19145610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 8 - 213
Target Start/End: Original strand, 32059440 - 32059645
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  32059440 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 32059538  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||  ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  32059539 gacttagcccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 32059638  T
Q  207 gagttat 213  Q
    | |||||    
T  32059639 gggttat 32059645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 27498731 - 27498935
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| ||  ||||||    
T  27498731 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctatgtatg 27498829  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||  |||| | || | ||||||||  ||| ||||||||||||||||||||||||    
T  27498830 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaat 27498929  T
Q  207 gagtta 212  Q
    | ||||    
T  27498930 gggtta 27498935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 11926501 - 11926706
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcactt-ttgtgggccccatttaaagctagagcaaagcactgtat 106  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||| || |||||   | ||||||| |||||||| ||||| |||| ||||||    
T  11926501 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagc-aagctctgtat 11926599  T
Q  107 gtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
    | |||| | ||| ||||||||| ||||||| ||||| | ||| | ||||   ||| | || | ||||||||| |||||||||||||||| ||||||||||    
T  11926600 ggacttagcccaccgaaattggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaa 11926699  T
Q  206 tgagtta 212  Q
    || ||||    
T  11926700 tgggtta 11926706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 8484661 - 8484860
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  8484661 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 8484759  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||| | ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  8484760 aacttagcccaccgaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 8484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 213
Target Start/End: Original strand, 15641106 - 15641310
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  15641106 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 15641203  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| ||||||||||||  ||||||||||    
T  15641204 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaat 15641303  T
Q  207 gagttat 213  Q
    | |||||    
T  15641304 gggttat 15641310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 36895545 - 36895423
Alignment:
Q  85 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 184  Q
    |||| ||||||||||  |||||| ||||| ||| ||||||||||||||||| ||||||| | | |||||||||||| | |||| ||||||||| ||| |     
T  36895545 aagccagagcaaagctttgtatggacttgaccaccgaaattggtaccagagggaatcgaacatgaaaccttgagaggagcacactccaagatcccaagct 36895446  T
Q  185 aaccactaggtcaaccccaaatg 207  Q
    || ||||| ||||| | ||||||    
T  36895445 aatcactacgtcaatctcaaatg 36895423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 1827641 - 1827734
Alignment:
Q  119 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 212  Q
    ||||||||||| ||||| ||||||| ||| | ||||   ||| | || | ||||||||||||| ||||||||||||||||||||||||| ||||    
T  1827641 cgaaattggtatcagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggtta 1827734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 13038561 - 13038658
Alignment:
Q  115 ccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 212  Q
    ||||| ||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||||||||||||||| |||||||||||| ||||    
T  13038561 ccatcaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtta 13038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 38684404 - 38684209
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||| |||||||||||| |||| ||| ||||||| ||| ||||||||| |||  |||||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  38684404 aaaaatcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcg-ggggcccgtttaaagccagagc-aagctctgtatg 38684307  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaa 204  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  |||||||| || |||||||||    
T  38684306 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaaccccaa 38684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 19456211 - 19456337
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  19456211 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg-gggccccgtttaaagccagagc-aagctctgtatg 19456308  T
Q  108 tactt-gtccatcgaaattggtaccagag 135  Q
     |||| | ||| ||||||||| |||||||    
T  19456309 gacttagcccaccgaaattggcaccagag 19456337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 7085626 - 7085673
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatc 55  Q
    |||||||||||||||||||||| ||| ||||||| ||| |||||||||    
T  7085626 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatc 7085673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 10837493 - 10837442
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcac 59  Q
    |||||||||||||||||  ||||| ||||||||| ||| |||||||||||||    
T  10837493 aaaactcggtatccgatctaaggaccaactaatctgaggggaccaatctcac 10837442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 24158166 - 24158217
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcac 59  Q
    |||| ||||||||||||||||||| | ||||||| ||| |||||||||||||    
T  24158166 aaaattcggtatccgattcaaggaccgactaatctgaggggaccaatctcac 24158217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 33737938 - 33737888
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcac 59  Q
    |||||||||||||||||||||| ||||||||| | ||| |||||||||||||    
T  33737938 aaaactcggtatccgattcaagaatcaactaa-ccgaggggaccaatctcac 33737888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 216
Target Start/End: Complemental strand, 30486025 - 30485817
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||  ||||||| ||| ||||||||| |||  | |||||  | ||||  | |||||||| ||||| |||| |||||||    
T  30486025 aaaactcggtatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagc-aagctctgtatg 30485927  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacct-tgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
     |||| | ||| ||||||||  ||||||||||||||| ||| | |||| ||| || | || | ||||||||| ||| |||||| || || ||||||||||    
T  30485926 gacttagcccaccgaaattgacaccagagtgaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaaccgctgggccaaccccaaa 30485828  T
Q  206 tgagttattgt 216  Q
    || ||| ||||    
T  30485827 tgggtttttgt 30485817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 35425210 - 35425124
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagc 94  Q
    |||| |||||||||||| |||| ||| ||||||| ||||||||||||| |||  | |||||  | ||||||| |||||||| |||||    
T  35425210 aaaattcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc 35425124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 42006829 - 42006787
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 211  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  42006829 tccaagatctcaagccaaccactagcccaaccccaaatgagtt 42006787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 3715070 - 3715107
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  3715070 tccaagatcccaaaccaaccactaggccaaccccaaat 3715107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 10631289 - 10631341
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcact 60  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||||    
T  10631289 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccact 10631341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 18207404 - 18207269
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||| | |||||||| ||| | |||| |||||||    
T  18207404 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaac-aagctctgtatg 18207306  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||| ||| |||||||    
T  18207305 gacttagcccaccgaaattggcaccggagggaatcga 18207269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 21040553 - 21040589
Alignment:
Q  149 aaaccttgagagaaacacaatccaagatctcaaacca 185  Q
    ||||||||||||||||||| || ||||||||||||||    
T  21040553 aaaccttgagagaaacacactctaagatctcaaacca 21040589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 25343280 - 25343232
Alignment:
Q  164 cacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 212  Q
    ||||||||||||| ||||  ||||||||||| |||||||||||| ||||    
T  25343280 cacaatccaagatttcaagtcaaccactaggccaaccccaaatgggtta 25343232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 34310339 - 34310140
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| | ||||  ||| ||||||||| |||    ||||| || ||| ||| |||||||| ||||| |||| |||||||    
T  34310339 aaaactcggtatccgatccaagaatcgattaattcgaggggaccaatcccaccgtccacttatgggggtcccgtttaaagccagagc-aagctctgtatg 34310241  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| | ||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||  ||| || ||||||||| |||||||||||    
T  34310240 gacttagcccaccaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaat 34310141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 3734623 - 3734822
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||| | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  3734623 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 3734721  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  3734722 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 3734821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 34237655 - 34237854
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  |||||||  | ||||||| |||||||| ||||| |||| |||||||    
T  34237655 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagc-aagctctgtatg 34237753  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34237754 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 4718846 - 4718642
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  4718846 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 4718748  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacct-tgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||| ||| || | || | ||||||||| ||| |||||||||||| ||||||||||    
T  4718747 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 4718649  T
Q  206 tgagtta 212  Q
    || ||||    
T  4718648 tgggtta 4718642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 20306109 - 20305904
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||||| ||||||  ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  20306109 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatg 20306011  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||||||||||||| ||||||  |||||||  || | |||||  ||| | || | || |||||| ||| |||||||||||| |||||||||||    
T  20306010 gacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaat 20305911  T
Q  207 gagttat 213  Q
    | |||||    
T  20305910 gggttat 20305904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 21092742 - 21092537
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||||| ||||||  ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  21092742 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatg 21092644  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||||||||||||| ||||||  |||||||  || | |||||  ||| | || | || |||||| ||| |||||||||||| |||||||||||    
T  21092643 gacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaat 21092544  T
Q  207 gagttat 213  Q
    | |||||    
T  21092543 gggttat 21092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 28193674 - 28193477
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 108  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | ||||| |  ||||||| |||||||| ||||| |||| |||||||     
T  28193674 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagc-aagctctgtatgg 28193576  T
Q  109 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
    ||||   ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  28193575 acttaacccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 28193477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 11956133 - 11956262
Alignment:
Q  85 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 184  Q
    ||||||||||||||| |||| |  ||||||||| ||||||||  |||||||  |||||||| ||| |  ||||||||| |||| || ||||||||||| |    
T  11956133 aagctagagcaaagctctgtgtagacttgtccaccgaaattgacaccagagaaaatcgagcttaagatattgagagaatcacactctaagatctcaaatc 11956232  T
Q  185 aaccactaggtcaaccccaaatgagttatt 214  Q
    |||||||||  |||||  ||||||||||||    
T  11956233 aaccactagaccaaccttaaatgagttatt 11956262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 207
Target Start/End: Original strand, 24339691 - 24339823
Alignment:
Q  76 ccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaaga 175  Q
    |||| |||||||| | ||||||||  |||||| |||| |||| |||||||||||| ||||  |||||| ||||| |||||||||||| ||||||||| ||    
T  24339691 ccccgtttaaagccaaagcaaagctttgtatgaacttatccaccgaaattggtacaagagaaaatcgaacctaagaccttgagagaagcacaatccagga 24339790  T
Q  176 -tctcaaaccaaccactaggtcaaccccaaatg 207  Q
     || ||| ||||| |||||| ||||| ||||||    
T  24339791 ctcacaacccaactactaggccaacctcaaatg 24339823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 15259407 - 15259605
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 108  Q
    |||||||| ||||||| |||| ||| ||||||  ||| ||||||||  |||  | |||||  | ||||||| |||||||| ||||||| || |||||||     
T  15259407 aaactcggcatccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatgg 15259505  T
Q  109 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || ||||||||||| |||||||||||||||  ||||||||||||    
T  15259506 acttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaatg 15259605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 207
Target Start/End: Original strand, 34639284 - 34639405
Alignment:
Q  85 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 184  Q
    |||| |||||||||| ||||||| ||||  ||| ||||||||| ||||||| || |||||||| | |||||||||| | |||| ||||||||| ||| ||    
T  34639284 aagccagagcaaagctctgtatggacttacccaccgaaattggcaccagaggga-tcgagcctgagaccttgagaggagcacactccaagatcccaagcc 34639382  T
Q  185 aaccactaggtcaaccccaaatg 207  Q
    |||||||||   |||||||||||    
T  34639383 aaccactagactaaccccaaatg 34639405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 18128714 - 18128565
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||| |||| |||| | | ||||||| ||||||||||||| |||  | |||||  | ||||||| |||||||| |||||||||| || ||||    
T  18128714 aaaactcggtattcgatccaagaaccgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaagctctttatg 18128615  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttga 157  Q
     | | | ||| ||||||||| ||||||| |||||||  |||| |||||||    
T  18128614 gattcgcccaccgaaattggcaccagagagaatcgaatctaagaccttga 18128565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 39349457 - 39349245
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||| |||||||||| |||| ||| ||||||| ||| ||| ||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  39349457 aaaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 39349359  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| ||||||||| || |||||||||||    
T  39349358 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaat 39349259  T
Q  207 gagttattgtccaa 220  Q
    | ||| | ||||||    
T  39349258 gggttttggtccaa 39349245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 2618387 - 2618188
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||| ||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||| || |||||||| ||||||| || |||||||    
T  2618387 aaaactcggaatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaa-gctctgtatg 2618289  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | |||  |||||||| ||||||| ||||||| || || ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  2618288 gacttagcccactgaaattggcaccagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2618189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 8765526 - 8765661
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | | ||||| |||||||| ||||| |||| |||||||    
T  8765526 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatg 8765624  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||||||||||||| ||||||| |||||||    
T  8765625 gacttagcccatcgaaattggcaccagagggaatcga 8765661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 27746400 - 27746534
Alignment:
Q  73 gggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcc 171  Q
    ||||||| |||||||| ||||||| || ||||||| |||| | ||| ||||||||| |||| || ||||||| ||| | |||||  ||| | || | |||    
T  27746400 gggccccttttaaagccagagcaa-gctctgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactcc 27746498  T
Q  172 aagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||||| |||||||||||||||| ||||||||||||    
T  27746499 aagatcccaaaccaaccactaggccaaccccaaatg 27746534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 207
Target Start/End: Original strand, 22200637 - 22200758
Alignment:
Q  85 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 184  Q
    |||| |||||||||| ||||||| |||| ||| |||||||||| || |||| ||||||| ||| | || |||||||||  | | ||||||||| ||||||    
T  22200637 aagccagagcaaagctctgtatgaacttttccctcgaaattggcactagagggaatcgaacctgagactttgagagaagtaaactccaagatcccaaacc 22200736  T
Q  185 aaccactaggtcaaccccaaatg 207  Q
    |||||| ||| ||||| ||||||    
T  22200737 aaccac-aggccaacctcaaatg 22200758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 34694659 - 34694775
Alignment:
Q  91 gagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccac 190  Q
    |||||||||  |||||| | ||| ||| ||||||||| ||||||  ||||||| ||||| |||||||||| | || | ||||||||| |||  |||||||    
T  34694659 gagcaaagctttgtatgaatttgcccaccgaaattggcaccagatggaatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccac 34694758  T
Q  191 taggtcaaccccaaatg 207  Q
    |||  ||||||||||||    
T  34694759 tagaccaaccccaaatg 34694775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 11714931 - 11715010
Alignment:
Q  120 gaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaac 199  Q
    |||||||| | ||| | ||||||| ||| ||| |||||||||| || | |||||||||||||||||||||||||| ||||    
T  11714931 gaaattggcatcagggggaatcgaacctgaaatcttgagagaagcaaactccaagatctcaaaccaaccactaggccaac 11715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 2639411 - 2639500
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaa 97  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||||    
T  2639411 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaa 2639500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 216
Target Start/End: Complemental strand, 32879480 - 32879272
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||| || |||| ||| ||||||| ||| ||||||||| |||  | ||||| || ||||||| ||||| |  ||||| |||| |||||||    
T  32879480 aaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagc-aagctctgtatg 32879382  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | || |||||| |||  ||||||||||  |||||||||||    
T  32879381 aacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaaccccaaat 32879282  T
Q  207 gagttattgt 216  Q
    | ||| ||||    
T  32879281 gggtttttgt 32879272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 213
Target Start/End: Original strand, 3403567 - 3403707
Alignment:
Q  73 gggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcca 172  Q
    |||||||||||||||| | | |||||   |||||| ||||| ||| ||||||||| ||||||  ||||||| | ||| |||||||||  | || | ||||    
T  3403567 gggccccatttaaagccaaaacaaagttttgtatggacttgcccaccgaaattggcaccagatggaatcgaacataagaccttgagatgagcaaactcca 3403666  T
Q  173 agatctcaaaccaaccactaggtcaaccccaaatgagttat 213  Q
    ||||||||  |||||| | ||| ||||| |||||| |||||    
T  3403667 agatctcaggccaaccccaaggccaacctcaaatgggttat 3403707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 10292255 - 10292167
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    |||||||||||| |||| |||| ||||||||||| ||  ||||||||| |||  | ||||| || ||||||| |||||||| |||||||    
T  10292255 aaaactcggtattcgatccaagaatcaactaatccgaagggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaa 10292167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 21603431 - 21603343
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| |||||||    
T  21603431 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 21603343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 28964123 - 28964035
Alignment:
Q  119 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||||||| ||||||  ||||||| | | ||||||| |||| | || | || ||||||||||||||||||||||  ||||||||||||    
T  28964123 cgaaattggcaccagatggaatcgaacatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaatg 28964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 8387537 - 8387643
Alignment:
Q  101 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 200  Q
    ||||||| ||||| ||| | ||||||| |||||||  |||||| | | | ||| |||||||| || | || ||||||||||  ||||||||||| |||||    
T  8387537 ctgtatggacttgcccaccaaaattggcaccagaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaacc 8387636  T
Q  201 ccaaatg 207  Q
    |||||||    
T  8387637 ccaaatg 8387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 33585757 - 33585819
Alignment:
Q  138 aatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 200  Q
    |||||| ||| |||| ||||||| | |||| || ||||||||||||||||||||||| |||||    
T  33585757 aatcgaacctgaaactttgagaggagcacactctaagatctcaaaccaaccactaggccaacc 33585819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 33747083 - 33747037
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaat 54  Q
    ||||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  33747083 aaaactcggtatccgatccaaggatcgactaatccgagagaaccaat 33747037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 203
Target Start/End: Complemental strand, 41070885 - 41070767
Alignment:
Q  85 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 184  Q
    |||| |||| |||||  |||||| ||||| ||| ||||||||  |||| || ||||||| | | | |||||||||| | |||| ||||||||| |||  |    
T  41070885 aagccagagtaaagctatgtatgaacttgcccaccgaaattgacaccaaagggaatcgaacttgagaccttgagagtagcacactccaagatcccaagtc 41070786  T
Q  185 aaccactaggtcaacccca 203  Q
    |||||||||| ||||||||    
T  41070785 aaccactaggccaacccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 24066553 - 24066609
Alignment:
Q  151 accttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||||||||||| |||| ||||||||  ||||||||||||| || ||||| ||||||    
T  24066553 accttgagagaagcacattccaagattacaaaccaaccactcggccaacctcaaatg 24066609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 40058852 - 40059051
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40058852 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40058950  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||  |||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  40058951 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 40059050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 34844758 - 34844957
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  34844758 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 34844856  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||||||| | |||||||||| |||||||||||    
T  34844857 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaat 34844956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 52983815 - 52983617
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 108  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||     
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatgg 52983717  T
Q  109 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||| | |||  |||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||||||| |||||||||||| ||||||||||||    
T  52983716 acttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 52983617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 41085149 - 41085023
Alignment:
Q  82 ttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaa 181  Q
    |||||||||||||||||| || |||| |||||||||||||||| || | ||||| ||||||| | | | ||||||| || |  ||| |||||||||||||    
T  41085149 ttaaagctagagcaaagctctatatggacttgtccatcgaaatcggcatcagagagaatcgaacattagaccttgaaaggaggacactccaagatctcaa 41085050  T
Q  182 accaaccactaggtcaaccccaaatga 208  Q
      |||||||||| ||||||||||||||    
T  41085049 gtcaaccactagatcaaccccaaatga 41085023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 33696279 - 33696483
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| |||||||| |||| ||  ||||||| |||||||||||||||||  | |||||  | |||||||||||||||| ||||| |||| |||||||    
T  33696279 aaaactcgatatccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagc-aagctctgtatg 33696377  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| |||| || ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||| ||||    
T  33696378 gacttagcccaccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaat 33696477  T
Q  207 gagtta 212  Q
    | ||||    
T  33696478 gggtta 33696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 27528795 - 27528990
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| |||||||||||||  | |||||  | ||||||| | |||||| ||||| |||| |||||||    
T  27528795 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagc-aagctctgtatg 27528893  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 203  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||| | ||||||||    
T  27528894 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaacccca 27528990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 32986394 - 32986195
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| |||| || ||| ||||||||| |||  | |||||  | |||||||||||||||  ||||| |||| |||||||    
T  32986394 aaaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagc-aagctctgtatg 32986296  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| |||| || ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  32986295 gacttagcccaccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 32986196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 34723996 - 34723861
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||||||||||||| ||| || |||||  | ||||||| |||||||| ||||| ||||  ||||||    
T  34723996 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagc-aagctttgtatg 34723898  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  34723897 gacttagcccaccgaaattggcaccagagggaatcga 34723861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 12710299 - 12710190
Alignment:
Q  85 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 184  Q
    |||| |||||||||||||||||| ||||||||| ||||||||  |  | || ||||||| ||| | ||||| |||||| || | ||||||||| ||||||    
T  12710299 aagccagagcaaagcactgtatggacttgtccaccgaaattgacattaaagggaatcgaacctgagaccttaagagaagcatactccaagatcccaaacc 12710200  T
Q  185 aaccactagg 194  Q
    ||||||||||    
T  12710199 aaccactagg 12710190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 33992758 - 33992624
Alignment:
Q  73 gggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcc 171  Q
    ||||||| |||||||| ||||||| ||  |||||| |||| | ||| ||||||||| ||||||| ||||||| ||||| ||||   ||| | || | |||    
T  33992758 gggccccgtttaaagccagagcaa-gctatgtatggacttagcccaccgaaattggcaccagagagaatcgaacctaagacctctggaggagcaaactcc 33992660  T
Q  172 aagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||||| ||||||||||||||||||||||| |||||    
T  33992659 aagatcccaaaccaaccactaggtcaaccctaaatg 33992624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 5609202 - 5609401
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||| ||||| |||    |||||  | |||||||||||||||| ||||| |||| |||||||    
T  5609202 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagc-aagctctgtatg 5609300  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacc-ttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||  ||| |  | || | ||||||||| ||| |||||||||||| ||||||||||    
T  5609301 gacttagcccaccgaaattggcaccagagagaatcgaacctgagaccactga-atgagcaaactccaagatcccaagccaaccactaggccaaccccaaa 5609399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 9646293 - 9646414
Alignment:
Q  85 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 184  Q
    |||| |||||||||||||||||| ||||| |||| |||||||  | ||||| ||||| | | | | ||||||| || | |||| || |||||| ||||||    
T  9646293 aagccagagcaaagcactgtatgaacttgcccattgaaattgtcatcagagagaatcaaacatgagaccttgacaggagcacactcaaagatcccaaacc 9646392  T
Q  185 aaccactaggtcaaccccaaat 206  Q
    |||||||||  |||||||||||    
T  9646393 aaccactagaccaaccccaaat 9646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 25852412 - 25852212
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtggg-ccccatttaaagctagagcaaagcactgtat 106  Q
    ||||||||||||||| | |||| | | ||||||| ||| ||||||||| || | | |||||  | ||| |||  |||||||| ||||| |||| ||||||    
T  25852412 aaaactcggtatccggtccaagaaccgactaatccgaggggaccaatcccattgcccacttgcgagggtcccgttttaaagccagagc-aagctctgtat 25852314  T
Q  107 gtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
    | |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  25852313 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 25852214  T
Q  206 tg 207  Q
    ||    
T  25852213 tg 25852212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 46714590 - 46714390
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||| ||  ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| || || |||| |||||||    
T  46714590 aaaactcggtatccgattcaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggc-aagctctgtatg 46714492  T
Q  108 tactt-gtccatcgaaattggtaccagagtg-aatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
     |||| | ||| ||||||||| |||| || | |||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  46714491 gacttagcccaccgaaattggcaccaaagggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 46714392  T
Q  206 tg 207  Q
    ||    
T  46714391 tg 46714390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 43719226 - 43719271
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatgagttatt 214  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||    
T  43719226 tccaagatctcaaaccaaccactagaccaaccccaaatgaattatt 43719271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 41621680 - 41621800
Alignment:
Q  92 agcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccact 191  Q
    |||||||| ||||||| | ||| ||| | ||||||| |||||||  |||| | | | | |||||||||| | || | ||||||||||||| ||||||| |    
T  41621680 agcaaagctctgtatggatttgcccaccaaaattggcaccagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccatt 41621779  T
Q  192 aggtcaaccccaaatgagtta 212  Q
    ||| |||||||||||| ||||    
T  41621780 aggccaaccccaaatgggtta 41621800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 54127342 - 54127541
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||| ||||||| | |||| | | ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || ||||||     
T  54127342 aaaactcagtatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtata 54127440  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| || |||| |||| || ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  54127441 gacttagcccaccgaaattggcacaagagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 54127540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 7093469 - 7093390
Alignment:
Q  112 tgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccact 191  Q
    |||||| | ||||| | ||||||| ||||||| ||||||||||||| || | |||| ||||||||| ||| |||||||||    
T  7093469 tgtccaccaaaatttgcaccagagagaatcgaacctaaaaccttgaaaggagcacactccaagatcccaagccaaccact 7093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 16339715 - 16339748
Alignment:
Q  102 tgtatgtacttgtccatcgaaattggtaccagag 135  Q
    |||||| |||||||||||||||||||||||||||    
T  16339715 tgtatggacttgtccatcgaaattggtaccagag 16339748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 18875517 - 18875720
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||| ||| |||  ||  ||||||| ||| ||| ||||| |||||| ||||| || ||||||  |||||||| ||||||| || |||||||    
T  18875517 aaaactcggtatctgatccaaaaattgactaatccgaggggatcaatcccactacccacttgtgggggcccg-tttaaagccagagcaa-gctctgtatg 18875614  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||  | ||||| ||||||| ||| | | |||   ||||||| | || || ||| |||||||||||||| ||||||| |||||    
T  18875615 gacttagcccaccgaaattgacatcagagggaatcgaacctgagatctttgaagaaacaaactctaaaatcccaaaccaaccactatgtcaaccacaaat 18875714  T
Q  207 gagtta 212  Q
    | ||||    
T  18875715 gggtta 18875720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 10125952 - 10125892
Alignment:
Q  73 gggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccag 133  Q
    ||||||| ||||||||||||||||||| |||||||  |||| |||  |||||||| |||||    
T  10125952 gggccccgtttaaagctagagcaaagctctgtatggccttgcccactgaaattggcaccag 10125892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 45302935 - 45302855
Alignment:
Q  109 acttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 189  Q
    |||| |||| ||||||| | || |||| ||||| | ||| ||| |||||||||| || | |||||||||||||||||||||    
T  45302935 acttatccaccgaaatttgcactagagagaatcaaacctgaaaacttgagagaagcaaactccaagatctcaaaccaacca 45302855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 45787862 - 45787906
Alignment:
Q  167 aatccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 211  Q
    ||||||||||  ||| |||||||||||| ||||||||||||||||    
T  45787862 aatccaagattccaagccaaccactaggccaaccccaaatgagtt 45787906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 8456150 - 8456349
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||||||||| |||| | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  8456150 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 8456248  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | || |||||| ||| |||||||||||| |||||||||||    
T  8456249 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaat 8456348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 30257821 - 30257622
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||| |||||||||||| |||| ||| ||||||| ||| ||||||||  |||  | |||||  | |||||||||||||||| ||||||| || |||||||    
T  30257821 aaaattcggtatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 30257723  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| ||||||||||||||| |||| || ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  30257722 gacttagtccatcgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 30257623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 35493108 - 35492904
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||| | || |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  35493108 aaaactcggtattcaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 35493010  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  35493009 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 35492910  T
Q  207 gagtta 212  Q
    | ||||    
T  35492909 gggtta 35492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 49258262 - 49258466
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  49258262 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagc-aagctctgtatg 49258360  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| || |||| ||||||| ||| | ||||   ||| | || | | ||||||| ||| ||||||||||||  ||||||||||    
T  49258361 gacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaat 49258460  T
Q  207 gagtta 212  Q
    | ||||    
T  49258461 gggtta 49258466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 40133449 - 40133648
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40133449 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40133547  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||  ||||||| ||||||| ||| | |||||  ||| | || | ||||| ||| ||| |||||||||||| |||||||||||    
T  40133548 gacttagcccaccgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaat 40133647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 45529755 - 45529953
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||||| || |||||||    
T  45529755 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaa-gctctgtatg 45529852  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | |||||||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  45529853 gacttagcccatcgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 45529952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 27887496 - 27887422
Alignment:
Q  137 gaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 211  Q
    ||||||| ||||| || ||||||||| |||| ||||| ||||||| ||||||||||| |||||||||||||||||    
T  27887496 gaatcgaacctaagacattgagagaagcacactccaatatctcaagccaaccactagatcaaccccaaatgagtt 27887422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 4462829 - 4462626
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||| || |||| || |||||||| ||| ||| ||||| |||    |||||  | ||||||| ||||||||||||| || || |||||||    
T  4462829 aaaactcggtatccaatccaagaataaactaatccgagtggatcaatcccaccgtccacttgcg-gggccccgtttaaagctagagtaa-gctctgtatg 4462732  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | |||||||||||||| |||||| ||||||| | | | || ||   || | || | ||||||||||||| |||||||||||| |||||||||||    
T  4462731 aacttagcccatcgaaattggtgccagagggaatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccccaaat 4462632  T
Q  207 gagtta 212  Q
    ||||||    
T  4462631 gagtta 4462626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 40941022 - 40940818
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||| |||||||| ||  | ||||  ||| |||||||||  || || ||||| || ||||||| |||||||  ||||||| || |||||||    
T  40941022 aaaactcggtatctgattcaagaattgagtaattcgaggggaccaatcctaccacccacttgtgggggccccgtttaaagtcagagcaa-gctctgtatg 40940924  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| ||||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  40940923 gacttagtccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 40940824  T
Q  207 gagtta 212  Q
    | ||||    
T  40940823 gggtta 40940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 46576545 - 46576341
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| |||||||  || |||||||||  ||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  46576545 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 46576447  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | |||  |||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  46576446 gacttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 46576347  T
Q  207 gagtta 212  Q
    | ||||    
T  46576346 gggtta 46576341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 34492575 - 34492774
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||| ||| |||| ||||||||||| ||  ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  34492575 aaaactcggtatcagatccaagaatcaactaatctgaatggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 34492673  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| | ||||| ||||||| | | | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34492674 gacttagcccaacgaaattggcagcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34492773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 39041852 - 39041987
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||| || |||||  | ||||||| |||||||| ||||| |||| ||| |||    
T  39041852 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagc-aagctctgcatg 39041950  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  39041951 gacttagcccaccgaaattggcaccagagagaatcga 39041987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 48977585 - 48977386
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||| |||  | |||||    ||||||| |||||||| ||||| |||| |||||||    
T  48977585 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagc-aagctctgtatg 48977487  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||   ||| ||||||||| ||||||  ||||||| ||| | |||||  ||| | || | ||||||||| |||  ||||||||||| |||||||||||    
T  48977486 gacttaacccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 48977387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 50731237 - 50731432
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||||| ||||||| ||| ||||||||| |||  | ||||| |||||||||| ||  |||  |||||   || || ||||    
T  50731237 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtgtgggcccc-ttataagtcagagc--tgctctatatg 50731333  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     ||||||||| |||||||||||||| |  ||||| | | | | |||||||||| | |||| | |||||||||||  ||||||||||||| || |||||||    
T  50731334 gacttgtccaccgaaattggtacca-acggaatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatg 50731432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 50781617 - 50781422
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||||| ||||||| ||| ||||||||| |||  | ||||| |||||||||| ||  |||  |||||   || || ||||    
T  50781617 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtgtgggcccc-ttataagtcagagc--tgctctatatg 50781521  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     ||||||||| |||||||||||||| |  ||||| | | | | |||||||||| | |||| | |||||||||||  ||||||||||||| || |||||||    
T  50781520 gacttgtccaccgaaattggtacca-acggaatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatg 50781422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 53424177 - 53424375
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  |||||||  | ||| ||| |||||||| | |||||| | |||||||    
T  53424177 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcg-ggggcccgtttaaagccatagcaaa-ctctgtatg 53424274  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  53424275 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 53424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 1178367 - 1178234
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| ||||  || ||||||| ||| ||||||||| |||  | ||| | || |||||||||||||||| |||||||||  |||||||    
T  1178367 aaaactcggtatccgatccaagattcgactaatccgag-ggaccaatcccaccgcccacgtgtg-gggccccatttaaagccagagcaaagttctgtatg 1178270  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcga 143  Q
     ||||| ||| ||||||||| ||||| | |||||||    
T  1178269 gacttgcccaccgaaattggcaccagggagaatcga 1178234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 4252508 - 4252595
Alignment:
Q  120 gaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||||||| ||||||| ||||| | | | | |||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||    
T  4252508 gaaattggcaccagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatg 4252595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 213
Target Start/End: Original strand, 30807153 - 30807358
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtggg-ccccatttaaagctagagcaaagcactgtat 106  Q
    ||||||||||||||||| |||| ||| ||||||| ||| |||||||||  ||  | |||||  | ||| |||| |||||||| ||||||| || ||||||    
T  30807153 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcctaccgcccacttgcggggggccccgtttaaagccagagcaa-gctctgtat 30807250  T
Q  107 gtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
    | |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  30807251 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 30807350  T
Q  206 tgagttat 213  Q
    || |||||    
T  30807351 tgggttat 30807358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 15566500 - 15566692
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  15566500 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcg-ggggcccgtttaaagccagagc-aagctctgtatg 15566597  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 201  Q
     |||| | ||| ||||||||| || |||| ||||||| ||| | ||||   ||| | || | ||||||||||||| |||||||||||| ||||||    
T  15566598 gacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccc 15566692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 34844506 - 34844396
Alignment:
Q  77 cccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagat 176  Q
    |||||||||||| | |||||||| ||||||||||| ||||| |||||||||  |  ||| ||||||| ||| | |||||||||| | |||| |||||| |    
T  34844506 cccatttaaagccatagcaaagctctgtatgtactagtccaccgaaattggctctggagggaatcgaacctgagaccttgagaggagcacactccaaggt 34844407  T
Q  177 ctcaaaccaac 187  Q
    ||||| |||||    
T  34844406 ctcaagccaac 34844396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 26174310 - 26174114
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||||| ||||||||| ||||| |||| |||||||    
T  26174310 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagc-aagctctgtatg 26174212  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaa 204  Q
     ||||   ||| ||||||||| |||||||  |||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||| ||||    
T  26174211 gacttaacccaccgaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 45272416 - 45272620
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| ||||  |||||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| | |||||    
T  45272416 aaaactcggtatccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctccgtatg 45272514  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| |||||||  || | || |   ||| | || | ||||||||| ||| ||||| |||||| |||||||||||    
T  45272515 gacttagcccaccgaaattggcaccagagggaatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaat 45272614  T
Q  207 gagtta 212  Q
    | ||||    
T  45272615 gggtta 45272620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 50583095 - 50582990
Alignment:
Q  102 tgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 201  Q
    |||||| ||||  ||| ||||||||| | |||||  |||||| ||| ||||||| |||| | || | ||||||||| |||||||||||||||| ||||||    
T  50583095 tgtatggacttacccaacgaaattggcaacagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccc 50582996  T
Q  202 caaatg 207  Q
    ||||||    
T  50582995 caaatg 50582990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 25289715 - 25289913
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  25289715 aaaactcggtatccgatccaagaatcgactaattcgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 25289812  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| || |||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  25289813 gacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 25289912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 52455649 - 52455848
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||| || |||| ||| ||||||| ||| ||||||||| ||| | ||||||  | ||||||| |||||||  ||||| |||| |||| |     
T  52455649 aaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaagtcagagc-aagctctgtgta 52455747  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||||| ||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| | | |||||||||||| |||||||||||    
T  52455748 gacttagcccatcaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaaccccaaat 52455847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 27812011 - 27812066
Alignment:
Q  151 accttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
    |||||||||||| |||| ||||| |||||||| ||||||||||||||| |||||||    
T  27812011 accttgagagaagcacattccaaaatctcaaatcaaccactaggtcaatcccaaat 27812066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 52821636 - 52821833
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  52821636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttacg-gggccccgtttaaagccagagc-aagctctgtatg 52821733  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| |  || ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  ||||||||||| |||| ||||||    
T  52821734 gacttagctcaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacaccaaat 52821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 10083819 - 10083952
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||    ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  10083819 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagc-aagctctgtatg 10083917  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatc 141  Q
     |||| | ||| ||||||||| || |||| |||||    
T  10083918 gacttagcccaccgaaattggcactagagggaatc 10083952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 32151621 - 32151428
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||  ||| |||||||||||||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  32151621 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 32151523  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 201  Q
      ||| | ||| ||||||||| || |||| |||||||   | |||||||  ||| | || | ||||||||| |||  ||||||||||| ||||||    
T  32151522 agcttagcccaccgaaattggcactagagagaatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccc 32151428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 11390638 - 11390601
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11390638 tccaagatctcaaaccaaccactaggccaaccccaaat 11390601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 26158922 - 26158809
Alignment:
Q  101 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 200  Q
    ||||||| ||||  ||| ||||||||| |||| || ||||  | ||| | |||||||||| | |||| ||||||||||||| |||||   |||| |||||    
T  26158922 ctgtatggacttacccaccgaaattggcaccaaagggaatgaaacctgagaccttgagaggagcacactccaagatctcaagccaacacataggccaacc 26158823  T
Q  201 ccaaatgagttatt 214  Q
    ||||||||||||||    
T  26158822 ccaaatgagttatt 26158809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 8097279 - 8097414
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| | || |||||||    
T  8097279 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-atgctctgtatg 8097377  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||||||||||| | || |||| |||||||    
T  8097378 gacttagcccatcgaaattagcacaagagggaatcga 8097414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 36660824 - 36660768
Alignment:
Q  151 accttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||||||||| | || | |||||||||  ||||||||||||||||||||||||||||    
T  36660824 accttgagaggagcaaactccaagatcctaaaccaaccactaggtcaaccccaaatg 36660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 51532986 - 51532787
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||| ||  ||||| | | ||||||| ||| ||||||||| |||    |||||  | ||| ||||||||||| |||||||| || |||||||    
T  51532986 aaaactcggtattcggatcaagaaccgactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaagttagagcaa-gctctgtatg 51532888  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| |  |||| ||||||| | | | |||||  ||||| || | ||||| ||||||||||||| | ||||||||||||||||    
T  51532887 gacttagcccaccgaaattggcattagagagaatcgaacatgagacctttggagaagcaaactccaaaatctcaaaccaactaataggtcaaccccaaat 51532788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 53233911 - 53234045
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||| ||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||| ||| ||||| |||| |||||||    
T  53233911 aaaactcggtatccga-tcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagc-aagctctgtatg 53234008  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  53234009 gacttagcccaccgaaattggcaccagagagaatcga 53234045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 4048147 - 4048100
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatc 55  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||||||||    
T  4048147 aaaactcggtatccgatccaagaatcaactaatccgaggggaccaatc 4048100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 48105073 - 48104986
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    |||||||||||||||| |||| ||| ||||||| ||  |||||||||||||  | ||||| || ||||||  |||||||| |||||||    
T  48105073 aaactcggtatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgtgggggccctgtttaaagccagagcaa 48104986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 10190742 - 10190875
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||    |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  10190742 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 10190840  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatc 141  Q
     |||| | ||| ||||||||| || |||| |||||    
T  10190841 gacttagcccaccgaaattggcactagagggaatc 10190875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 55371381 - 55371483
Alignment:
Q  104 tatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 203  Q
    |||| ||||||||  ||||||||| |||| || ||||||| | | | |||||||||||| || | ||||| ||| ||| |||||||||||| ||||| ||    
T  55371381 tatgaacttgtccgccgaaattggcaccaaagggaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctca 55371480  T
Q  204 aat 206  Q
    |||    
T  55371481 aat 55371483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 8958035 - 8958124
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggcccca-tttaaagctagagcaa 96  Q
    ||||||||||||| ||| |||| ||| | ||||||||| ||||||||| |||  | |||||  | |||||||| ||||||||||||||||    
T  8958035 aaaactcggtatctgatccaagaatcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattttaaagctagagcaa 8958124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 21363140 - 21362936
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| | ||||| ||| | ||||||| |||  | |||||  | |||| || |||||||| ||||||| || |||||||    
T  21363140 aaaactcggtatccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaa-gctctgtatg 21363042  T
Q  108 tacttgtcc-atcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||  || | ||||||||  ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  ||||||||||| |||||||||||    
T  21363041 gacttagcctaccgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 21362942  T
Q  207 gagtta 212  Q
    | ||||    
T  21362941 gggtta 21362936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 33417975 - 33418020
Alignment:
Q  161 aaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
    ||||||| || || ||||||||||||||||||| ||||||||||||    
T  33417975 aaacacactctaaaatctcaaaccaaccactagatcaaccccaaat 33418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 215
Target Start/End: Complemental strand, 9208449 - 9208242
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||  ||| |||| ||| |||| || |||  |||||||| |||  | |||||  | |||||||||||||||| | ||||| || |||||||    
T  9208449 aaaactcggtatttgatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctctgtatg 9208350  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     ||||| ||| ||||||||| ||||| | ||||||| ||| | |||||||||| | || | ||||||||| ||| |||||||||||  ||||||||||||    
T  9208349 gacttgcccaccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccccaaatg 9208250  T
Q  208 agttattg 215  Q
     |||||||    
T  9208249 ggttattg 9208242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 17149458 - 17149637
Alignment:
Q  10 aactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgta 109  Q
    ||||||||||| |||||||||| | ||||||  ||| ||||||||| |||   ||||||  | |||||||||||||||| | ||||| || ||||||| |    
T  17149458 aactcggtatctgattcaaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggctctgtatgga 17149557  T
Q  110 cttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 189  Q
    |||| | | ||||||| | ||||||| ||||||| ||| | |||||||||| | |||| ||||||||| |||||||||||    
T  17149558 cttgccaaccgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaaaccaacca 17149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 15360098 - 15360297
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  15360098 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 15360196  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  15360197 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 15360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 11449068 - 11448871
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  11449068 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 11448970  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  11448969 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 9690638 - 9690833
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||||||||||||| |||    ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  9690638 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagc-aagctctgtatg 9690736  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 203  Q
     |||| | ||| ||||||||  || |||   |||||| ||||| ||||   ||  | || | ||||| |||||||||||||||||||||||||||||    
T  9690737 gacttagcccaccgaaattgacactagaagaaatcgaacctaagacctctggaagagcaaactccaaaatctcaaaccaaccactaggtcaacccca 9690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 9239171 - 9238973
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 108  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||||||||||||||| | ||| |||| || ||||     
T  9239171 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagc-aagctctatatgg 9239073  T
Q  109 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||   ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||||    
T  9239072 acttaacccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9238973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 14504082 - 14504200
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||||| ||||||  ||||||| ||||| |||  | |||||  | || ||||||||||| | |||||||| |||||||||    
T  14504082 aaaactcggtatccgatacaaggatcgactaattcgagaggatcaatcccaccgcccacttgcggggaccccatttaaaaccagagcaaaacactgtatg 14504181  T
Q  108 tacttgtccatcgaaattg 126  Q
     ||||  ||||||||||||    
T  14504182 gacttacccatcgaaattg 14504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 34147543 - 34147339
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  34147543 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagctctgtatg 34147445  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | || |   ||  | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34147444 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34147345  T
Q  207 gagtta 212  Q
    | ||||    
T  34147344 gggtta 34147339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 34160159 - 34159955
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  34160159 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagctctgtatg 34160061  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | || |   ||  | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34160060 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34159961  T
Q  207 gagtta 212  Q
    | ||||    
T  34159960 gggtta 34159955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 21148511 - 21148714
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||  ||||| |||| |||||||    
T  21148511 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg-gggccccgtttaaagtcagagc-aagctctgtatg 21148608  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacct-tgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
     |||| | ||||||||||||| || |||| ||||||| | | | |||| ||| | || || | ||||||||| ||| |||||||||||| |||| |||||    
T  21148609 gacttagcccatcgaaattggcactagagggaatcgaacttgagacctctga-aaaagcaaactccaagatcccaagccaaccactaggccaactccaaa 21148707  T
Q  206 tgagtta 212  Q
    || ||||    
T  21148708 tgggtta 21148714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 3222636 - 3222838
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||  ||||| |||| |||||||    
T  3222636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg-gggccccgtttaaagacagagc-aagctctgtatg 3222733  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||| |  ||| | || | | ||||||| ||| |||||||||||| |||||||||||    
T  3222734 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacc-tctgaggagcaaactgcaagatcccaagccaaccactaggccaaccccaaat 3222832  T
Q  207 gagtta 212  Q
    | ||||    
T  3222833 gggtta 3222838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 11007362 - 11007158
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||| ||||||||||  ||| ||| ||||||| ||| || |||||| |||  | |||||  | |||||||  ||||||||||||||| ||  ||||||    
T  11007362 aaaactaggtatccgatcaaagaatcgactaatccgagggggccaatcccaccgcccacttgcgggggccccgcttaaagctagagcaa-gctttgtatg 11007264  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||  | ||||||||||||| ||| | |||||  ||| | || | ||||||||| ||| ||||||||||| ||||||||||||    
T  11007263 gacttagcccaccgaaattgagagcagagtgaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaat 11007164  T
Q  207 gagtta 212  Q
    | ||||    
T  11007163 gggtta 11007158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 28672264 - 28672060
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||| ||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| | | ||| || |||||||    
T  28672264 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaa-gctctgtatg 28672166  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| | ||||||  ||||||| ||||||| ||||| ||||  |||| | || | |||||||||||||  ||||||||||| |||||||||||    
T  28672165 gacttagcccaccaaaattgacaccagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 28672066  T
Q  207 gagtta 212  Q
    | ||||    
T  28672065 gggtta 28672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 33499645 - 33499466
Alignment:
Q  35 actaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccaga 134  Q
    ||||||| ||| ||||||||| |||  | ||||| ||  || |||||||||||| | |||||||   |||||| ||| | ||| ||||||||  ||||||    
T  33499645 actaatccgaggggaccaatcccaccgcccacttgtggagggcccatttaaagccaaagcaaagatttgtatggactagcccaccgaaattgacaccaga 33499546  T
Q  135 gtgaatc-gagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagttat 213  Q
    | ||||| || ||| | |||||||||| | || | ||||||||| ||| |||||||| ||| |||||||||||| |||||    
T  33499545 gggaatctgaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggttat 33499466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 1345132 - 1344935
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| |||||||  || ||||||||| |||    |||||  | ||| ||| |||||||| ||||||| ||  ||||||    
T  1345132 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaa-gctttgtatg 1345034  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | |||  |||||||| ||||||| ||||||| ||| | ||||   ||| |||| | ||||||||| ||  ||||||||||||||||||||||||    
T  1345033 gacttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggaacaaactccaagatccca--ccaaccactaggtcaaccccaaat 1344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 206
Target Start/End: Complemental strand, 10377847 - 10377714
Alignment:
Q  73 gggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcca 172  Q
    ||||||| ||| |||  ||||||||||  |||||| ||||| ||| ||||||||| |||| || |||| || ||| | ||||||| |  | |||| ||||    
T  10377847 gggccccgttttaagtcagagcaaagctatgtatggacttgcccaccgaaattggcaccatagggaattgaacctgagaccttgacatgagcacactcca 10377748  T
Q  173 agatctcaaaccaaccactaggtcaaccccaaat 206  Q
    ||||||||| ||||| ||| || |||||||||||    
T  10377747 agatctcaagccaacaactgggccaaccccaaat 10377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 654146 - 654281
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||  ||| ||||||| ||| ||||||||| |||  | |||||  | | ||||| |||||||| ||||| |||| |||||||    
T  654146 aaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatg 654244  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  654245 gacttagcccaccgaaattggcaccagagggaatcga 654281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 3907625 - 3907545
Alignment:
Q  121 aaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 201  Q
    ||||||| ||||||| ||||||| | | ||| |||||||| | ||||  |||||||| ||||||||||||||| |||||||    
T  3907625 aaattggcaccagagagaatcgaacttgaaatcttgagaggagcacaccccaagatcccaaaccaaccactagatcaaccc 3907545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 21982321 - 21982519
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  21982321 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 21982418  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | |||  |||||||| ||||  | ||||||| ||| | ||||   ||| | || | | ||||||| ||| |||||||||||| |||||||||||    
T  21982419 gacttagcccactgaaattggcaccatcgggaatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactaggccaaccccaaat 21982518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 8479408 - 8479310
Alignment:
Q  109 acttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||| ||| ||||||||  |||||||  |||||| ||| ||| ||| |||| | |||| ||||||||| |||  ||||||||||| ||||||||||||    
T  8479408 acttgcccaccgaaattgacaccagaggaaatcgaacctgaaatcttaagaggagcacactccaagatcccaagtcaaccactaggccaaccccaaatg 8479310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 14213079 - 14212998
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagct 89  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||| || |||||  | || |||| |||||||||    
T  14213079 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcggggcccccgtttaaagct 14212998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 22576103 - 22576058
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatgagttatt 214  Q
    ||||||||| ||| |||||||||||| |||||||||||| ||||||    
T  22576103 tccaagatcccaagccaaccactaggccaaccccaaatgggttatt 22576058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 12591766 - 12591635
Alignment:
Q  76 ccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaag 174  Q
    |||| |||||||| ||||||| || ||||||| |||| | |||  |||||||| || |||| ||||||| ||| | |||||  ||| | || | ||||||    
T  12591766 ccccgtttaaagccagagcaa-gctctgtatggacttagcccactgaaattggcacgagagggaatcgaacctgagacctttggaggagcaaactccaag 12591668  T
Q  175 atctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||| ||| |||||||||||| ||||||||||||    
T  12591667 atcccaagccaaccactaggccaaccccaaatg 12591635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 37056322 - 37056217
Alignment:
Q  101 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 200  Q
    ||||||| ||||||||||||||||||| |||||||  ||||||  || |||||||||||| | |||| ||||||||| ||||||||||||||  ||||||    
T  37056322 ctgtatggacttgtccatcgaaattggcaccagaggaaatcgaatctcaaaccttgagaggagcacactccaagatcacaaaccaaccactaaatcaacc 37056223  T
Q  201 ccaaat 206  Q
    ||||||    
T  37056222 ccaaat 37056217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 2751472 - 2751273
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  2751472 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 2751374  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  2751373 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2751274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 21217833 - 21218032
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||| ||| ||||| |||  | ||||| || ||| ||| |||||||||||||| |||| |||||||    
T  21217833 aaaactcggtatccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagc-aagctctgtatg 21217931  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| | ||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  21217932 gacttagcccaccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 21218031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 21574102 - 21574302
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||| | ||||||| ||| |||||||||||||  |  |||| || ||||||| ||  ||||  | ||||||| |||||||    
T  21574102 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatctcaccgcctacttgtgggggccccgttctaagcctgggcaaagctctgtatg 21574201  T
Q  108 tacttgtccatcgaaattggtaccagagtg-aatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||| ||| |||| |||| |||| || | |||||| |||   |||||||||| | |||| ||||| ||| |||||||||||||||| |||||||||||    
T  21574202 gacttgcccaccgaagttggcaccaaaggggaatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaat 21574301  T
Q  207 g 207  Q
    |    
T  21574302 g 21574302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 22120089 - 22119890
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  22120089 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 22119991  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  22119990 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 22119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 40542910 - 40543109
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40542910 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40543008  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  40543009 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 40543108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 28647170 - 28646972
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| |||||||| ||||||   ||||||  ||| | ||||||| |||  | ||||| || ||||||| ||  |||| |||||||| | ||||||     
T  28647170 aaaactcgatatccgatccaaggacagactaattcgagggaaccaatcccaccgcccacttgtgggggccccgttataagccagagcaaaactctgtatt 28647071  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||| ||| ||||||||| ||||||| ||||||| ||| | |||||||||||| |||| ||||||||| |||  ||| ||||||| |||||||||||    
T  28647070 gacttgcccaccgaaattggcaccagagggaatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaat 28646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 18044308 - 18044104
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||  ||| || ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  18044308 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagc-aagctctgtatg 18044210  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| || |||| ||||||| |||   ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  18044209 gacttagcccaccgaaattggcacaagagggaatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 18044110  T
Q  207 gagtta 212  Q
    | ||||    
T  18044109 gggtta 18044104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 7275478 - 7275279
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||  |||||||| ||||| |||| |||||||    
T  7275478 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagc-aagctctgtatg 7275380  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  7275379 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 7275280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 23330739 - 23330938
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||||  ||||||  ||| |||||||||| ||  | |||||  |  || ||| ||| |||| |||||||||| |||||||    
T  23330739 aaaactcggtatccgatccaaggattgactaatttgaggggaccaatcttaccgcccacttgcggaggtcccgttttaagccagagcaaagctctgtatg 23330838  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     ||||| ||| ||||||||| ||| ||| || |||| ||| | |||||||||| | |||| || || ||| ||| ||||||||||||  |||||||||||    
T  23330839 gacttgcccaccgaaattggcaccggagggagtcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaaccccaaatg 23330938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 19421431 - 19421233
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 108  Q
    |||||||||||| |||||||| ||| ||||||| |||  |||||||| |||  | ||||| || | |||||||||||||  ||||| |||| |||||||     
T  19421431 aaactcggtatctgattcaagaatcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagc-aagctctgtatgg 19421333  T
Q  109 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||| | ||||||||||||  ||||||   |||||| ||| | ||||  |||| | || | ||||||||| ||| |||||||||| ||||||||||||||    
T  19421332 acttagcccatcgaaattgacaccagaagaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatg 19421233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 27312353 - 27312155
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||| || |||||||  ||||  | || |||||||    
T  27312353 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagtcagaggta-gctctgtatg 27312255  T
Q  108 tacttgtc-catcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||| | |||||||||||| || |||| ||||||| ||| ||||||  |||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  27312254 gacttggcacatcgaaattggcactagagggaatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 27312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 7262416 - 7262220
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||||  | ||||||  ||| ||||||||| ||| | |||||| || ||| |||||||||||| |||| ||||| || ||||    
T  7262416 aaaactcggtatccgattcaagggccgactaattcgaggggaccaatcccacca-tcacttgtg-gggacccatttaaagccagagtaaagctctatatg 7262319  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     | ||||||||||||||||| | ||  | ||||| | | | | |||||||||| | |||| | ||||||| |||  ||||||||| ||||||| |||||    
T  7262318 gatttgtccatcgaaattggcatcatggagaatcaaacttgagaccttgagaggatcacactacaagatcacaagtcaaccactaagtcaacctcaaat 7262220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 12211628 - 12211734
Alignment:
Q  101 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 200  Q
    ||||||| ||||||||||||||||||| |||||||  |||| | ||| | | |||||||| | |||| |||||||||  || |||||||||||| |||||    
T  12211628 ctgtatggacttgtccatcgaaattggcaccagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaacc 12211727  T
Q  201 ccaaatg 207  Q
    |||||||    
T  12211728 ccaaatg 12211734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 17196950 - 17197154
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  17196950 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 17197048  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| |  || ||||||||| ||||||| ||||||| | | | ||||   ||| | || | ||||||||| |||||||||||||||| | |||||||||    
T  17197049 gacttagctcaccgaaattggcaccagagggaatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaat 17197148  T
Q  207 gagtta 212  Q
    | ||||    
T  17197149 gggtta 17197154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 22696410 - 22696317
Alignment:
Q  119 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 212  Q
    ||||||||| ||||||| ||||| | ||| | |||||||||| | |||| ||||||||| |||| ||||||||||| ||||||| |||||||||    
T  22696410 cgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacccctaatgagtta 22696317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 2103254 - 2103057
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| || | ||| ||||||| ||| ||||||||| |||  | |||||  | |||||||||||||||| ||||||| || |||||||    
T  2103254 aaaactcggtatccgat-catgaatcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 2103158  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  2103157 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2103058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 7175862 - 7176061
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||| ||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||  |||||||| ||||||| || |||||||    
T  7175862 aaaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaa-gctctgtatg 7175960  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  7175961 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 7176060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 211
Target Start/End: Complemental strand, 1469248 - 1469110
Alignment:
Q  73 gggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcca 172  Q
    ||||| |||||||||| | || |||||  |||||| ||||| ||||||||||||| |  | ||  |||||| ||| | |||||||||  |||| | ||||    
T  1469248 gggcctcatttaaagccaaagtaaagctttgtatggacttgcccatcgaaattggcattaaaggaaatcgaacctgagaccttgagatgaacaaactcca 1469149  T
Q  173 agatctcaaaccaaccactaggtcaaccccaaatgagtt 211  Q
    |||| ||||  ||||||||||| ||||||||||||||||    
T  1469148 agatttcaagtcaaccactaggccaaccccaaatgagtt 1469110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 23012508 - 23012709
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||  | | ||  ||||||  ||| ||||||||| |||  | ||||| || |||||||||||||||| ||||| |||| |||||||    
T  23012508 aaaactcggtatccgatcaatgaattgactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagc-aagctctgtatg 23012606  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| || |||| ||||| | ||||| ||||   ||||| || | ||||||||| ||| ||||||||| || |||||| ||||    
T  23012607 gacttagcccaccgaaattggcactagagggaatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccactgggccaaccctaaat 23012706  T
Q  207 gag 209  Q
    |||    
T  23012707 gag 23012709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 47541500 - 47541387
Alignment:
Q  92 agcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccact 191  Q
    |||||||| ||| ||| ||||||||| ||||||||  |||| || ||||| | | |||||||||||||| | |||| |||||||||| |||||||||| |    
T  47541500 agcaaagc-ctggatgaacttgtccaccgaaattgacaccaaagagaatcaaacttaaaaccttgagaggagcacactccaagatctgaaaccaaccatt 47541402  T
Q  192 aggtcaaccccaaat 206  Q
    ||| ||| |||||||    
T  47541401 aggccaatcccaaat 47541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 32849791 - 32849704
Alignment:
Q  9 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||| | ||||| || | | |||||||||||| |||||||    
T  32849791 aaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccactgcccacttatgggagtcccatttaaagccagagcaa 32849704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 1357175 - 1357237
Alignment:
Q  149 aaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 211  Q
    |||| |||||||||||| | ||||||||| ||||  |||||| ||||||||||||||||||||    
T  1357175 aaactttgagagaaacaaattccaagatcacaaattaaccacaaggtcaaccccaaatgagtt 1357237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 10091388 - 10091185
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||| ||| |||| ||| ||||||| ||| ||| ||||| |||  | |||||  | || ||||||||||||| ||||||| || |||||||    
T  10091388 aaaactcggtatcggat-caagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaa-gctctgtatg 10091291  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  10091290 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 10091191  T
Q  207 gagtta 212  Q
    | ||||    
T  10091190 gggtta 10091185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 22300003 - 22299958
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaa 53  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||    
T  22300003 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaa 22299958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 2344500 - 2344301
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||| |||  |||||||  | ||| ||| |||||||| | |  ||||| |||||||    
T  2344500 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagcca-aaaaaagctctgtatg 2344402  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| | ||||||| ||||||  |||||||  || | | |||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  2344401 gacttagcccaccaaaattggcaccagaaggaatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2344302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 32087238 - 32087194
Alignment:
Q  81 tttaaagctagagcaaagcactgtatgtacttgtccatcgaaatt 125  Q
    ||||||||||||||||||| || |||| |||||||||||||||||    
T  32087238 tttaaagctagagcaaagctctatatgaacttgtccatcgaaatt 32087194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 38864610 - 38864650
Alignment:
Q  172 aagatctcaaaccaaccactaggtcaaccccaaatgagtta 212  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  38864610 aagatctcaagtcaaccactaggtcaaccccaaatgagtta 38864650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 7799944 - 7800031
Alignment:
Q  120 gaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    |||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||||||||||||||||    
T  7799944 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatg 7800031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 22696522 - 22696475
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatc 55  Q
    ||||||||||||||||| |||||| | ||||||| |||||||||||||    
T  22696522 aaaactcggtatccgatccaaggaccgactaatccgagaggaccaatc 22696475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 13332584 - 13332626
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 211  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||    
T  13332584 tccaagatcccaagccaaccactaggccaaccccaaatgagtt 13332626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 21370637 - 21370599
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  21370637 tccaagatcccaaaccaaccactaggccaaccccaaatg 21370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 28089856 - 28089818
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  28089856 tccaagatctcaagccaaccactaggccaaccccaaatg 28089818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 28090020 - 28089970
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctca 58  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||||||    
T  28090020 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctca 28089970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 31713056 - 31713094
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  31713056 tccaagatcccaaaccaaccactaggccaaccccaaatg 31713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 42913513 - 42913705
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||  ||| ||||||||||| ||| ||||||||| |||    |||||  | ||||||| |||||||| ||||| |||  | |||||    
T  42913513 aaaactcggtatccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagc-aagttccgtatg 42913611  T
Q  108 tacttgt-ccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 200  Q
     |||| | ||||||||||||| |||| |   |||||| ||| | ||||  |||| | || | ||||||||| ||| |||||||||||| |||||    
T  42913612 gacttatcccatcgaaattggcaccatatgaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 42913705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 654705 - 654839
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| | | ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  654705 aaaactcggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcg-ggggcccgtttaaagccagagc-aagctctgtatg 654802  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  654803 gacttagcccaccgaaattggcaccagagggaatcga 654839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 3851958 - 3851870
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||| ||||| |||  | |||||  | ||||||| |||||||| |||||||    
T  3851958 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 3851870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 30466830 - 30467034
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||  ||||||||| |||| | |||||  | ||||||  |||||||| ||||||| || |||||||    
T  30466830 aaaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaa-gctctgtatg 30466928  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| | ||||| ||||||| ||| | ||||  |||| |||| | ||||| ||| |||||||||||||||| |||||||||||    
T  30466929 gacttagcccaccgaaattggcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaat 30467028  T
Q  207 gagtta 212  Q
    | ||||    
T  30467029 gggtta 30467034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 8192352 - 8192550
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||||| | ||||||| ||| || |||||| |||  | |||||  | ||| ||  | ||| || |||||||||| || ||||    
T  8192352 aaaactcggtatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcgaggggccgttctaa-gccagagcaaagctctatatg 8192450  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 207  Q
     ||||| ||| ||| ||||| ||||||| ||||||| ||| | |||||||||| | |||| ||||||||| ||| |||||||||||| ||||||||||||    
T  8192451 gacttgcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatg 8192550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 35171997 - 35171862
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  35171997 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 35171899  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| |||||||||| |||||| |||||||    
T  35171898 gacttagcccaccgaaattggtgccagagggaatcga 35171862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 36390569 - 36390765
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||| ||| ||| ||| ||| ||||||||| |||  | |||||  | ||| |||||||||||  ||||||| ||  ||||||    
T  36390569 aaaactcggtatccgattcaagtatcgactgatccgag-ggaccaatcccaccgcccacttgcgggggtcccatttaaagtcagagcaa-gctttgtatg 36390666  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| ||||| ||||||||| |||||||  |||||| ||| | |||||  ||||| || | ||  ||||| |||||||||||||||| |||||||||||    
T  36390667 gacttagtccaccgaaattggcaccagaggaaatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaaccccaaat 36390764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 6006890 - 6007057
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||| |||||||||||| ||||||| |||  |||||||| |||    |||||    | || |||||| |||||||| |||||| |||||||    
T  6006890 aaaactcggtatctgattcaaggatcgactaatctgaggagaccaatcacaccgtccacttgca-gagctccattttaagctagaacaaagctctgtatg 6006988  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagat 176  Q
     ||| |  || ||||||||||| ||||| |||||||  ||| ||||||||||||| |||| ||||||||    
T  6006989 gactcgaacaccgaaattggtatcagagagaatcgaatctagaaccttgagagaagcacactccaagat 6007057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 17324961 - 17324760
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| |||||||| |||| ||| ||||||  ||| |||| |||| |||  | ||||| || |||||| ||||||||| ||||||| || |||||||    
T  17324961 aaaactcgatatccgat-caagaatcgactaatttgaggggactaatcccaccgcccacttgtgggggccc-atttaaagccagagcaa-gctctgtatg 17324865  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||  |||||||||||||||| |||||||||||    
T  17324864 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaat 17324765  T
Q  207 gagtt 211  Q
    |||||    
T  17324764 gagtt 17324760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 41330039 - 41329842
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||| | |||| | | ||||||| ||| |||||||||||||  | ||||| || |||||||||||||||| ||||| |||| || ||||    
T  41330039 aaaactcggtatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagc-aagctct-tatg 41329942  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||  | ||||||| ||||||| |||||||  || |||||||  ||| | || | || |||||| ||||| |||||||||| |||||||||||    
T  41329941 gacttagcccgccaaaattggcaccagagggaatcgaatctgaaacctttggaggagcaaactctaagatcccaaactaaccactaggccaaccccaaat 41329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 3405225 - 3405343
Alignment:
Q  81 tttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctca 180  Q
    ||||||||||||| |||||  |||||| ||||| ||||  ||||||| ||||||| ||||||| |||   |||||||||  | |||| ||||||||| ||    
T  3405225 tttaaagctagagtaaagctttgtatggacttgcccattaaaattggcaccagagggaatcgaacctgtgaccttgagatgagcacattccaagatccca 3405324  T
Q  181 aaccaaccactaggtcaac 199  Q
    |  ||||||||||||||||    
T  3405325 agtcaaccactaggtcaac 3405343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 4618754 - 4618880
Alignment:
Q  77 cccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagat 176  Q
    |||||||||||| |||||||||   |||||| ||||| ||  ||||||||| ||||| |  |||||| ||| |||||||||||| | || | ||||||||    
T  4618754 cccatttaaagccagagcaaagttttgtatggacttgcccgccgaaattggcaccaggggaaatcgaacctgaaaccttgagaggagcatactccaagat 4618853  T
Q  177 ctcaaaccaaccactaggtcaacccca 203  Q
      ||| |||||||||||| ||||||||    
T  4618854 tccaagccaaccactaggccaacccca 4618880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 13266686 - 13266552
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||| |||||||| |||| ||| ||||||  ||| ||||||||| || ||| |||||  | ||||||| |||||||| ||||||| || |||||||    
T  13266686 aaaactcgatatccgatccaagaatcgactaatttgaggggaccaatcccattacccacttgcg-gggccccgtttaaagccagagcaa-gctctgtatg 13266589  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| ||||| || |||||| |||||||||||||||    
T  13266588 gacttagtccaccggaattggcaccagagtgaatcga 13266552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 15038156 - 15037957
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||| || |||||||| | ||| |||| |||||||    
T  15038156 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagc-aagctctgtatg 15038058  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | |||||  ||| | || | ||||||||| | |  ||||||||||| |||||||||||    
T  15038057 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaat 15037958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 33827573 - 33827772
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| |||||||  || ||||||||| |||  | |||||    ||| ||| |||||||| ||||| |||| |||||||    
T  33827573 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagc-aagctctgtatg 33827671  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | ||   ||||||||| ||| |||||||||||| |||||||||||    
T  33827672 gacttagcccaacgaaattggcaccagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaat 33827771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 44946053 - 44946252
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||  |||||||    
T  44946053 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagttctgtatg 44946151  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  44946152 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 44946251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 14946904 - 14946777
Alignment:
Q  81 tttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctc 179  Q
    ||||||||||||||| ||| | ||||| |||| | |||  |||||||  |||||||  |||||| |||||||||||||||| | || | | |||||||||    
T  14946904 tttaaagctagagcatagctccgtatggacttagcccactgaaattgacaccagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctc 14946805  T
Q  180 aaaccaaccactaggtcaaccccaaatg 207  Q
    ||  ||||||||||| |||| |||||||    
T  14946804 aagtcaaccactaggccaactccaaatg 14946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 19605846 - 19606038
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccattta-aagctagagcaaagcactgtat 106  Q
    |||||||| |||||||| ||||  |||||||||  ||| |||||||||||||  | |||||  ||||||||| |||  |||  |||||||  | ||||||    
T  19605846 aaaactcgatatccgatccaagtgtcaactaattcgaggggaccaatctcaccgcccactt--gtgggccccctttctaagtgagagcaagactctgtat 19605943  T
Q  107 gtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 201  Q
    | ||||| ||| ||||||| | |  |||| ||||||| ||| | |||||||||| | | || ||||||||| ||| |||||||||||| ||||||    
T  19605944 ggacttgcccaccgaaattagcattagagggaatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaaccactagggcaaccc 19606038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 28669070 - 28668946
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||  ||| ||||||| ||| ||||||||| |||  | ||||| || ||||||| |||||||| | ||| |||| |||||||    
T  28669070 aaaactcggtatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagc-aagctctgtatg 28668972  T
Q  108 tactt-gtccatcgaaattggtacca 132  Q
     |||| ||||| ||||||||| ||||    
T  28668971 gacttagtccaccgaaattggcacca 28668946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 31778228 - 31778140
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    ||||||||||||||||| |||| |   ||||||| |||||||||||||||||    |||||  | |||||||||||||||| |||||||    
T  31778228 aaaactcggtatccgatccaagaactgactaatctgagaggaccaatctcaccgtccacttgcgggggccccatttaaagccagagcaa 31778140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 19525485 - 19525576
Alignment:
Q  97 agcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacc 188  Q
    |||| |||||| ||||| ||| | ||||||| ||||||| ||||||| ||| | | ||||||||||||||| | ||||||| ||| ||||||    
T  19525485 agcattgtatggacttgcccaccaaaattggcaccagagggaatcgaacctgagatcttgagagaaacacacttcaagatcccaagccaacc 19525576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 5394214 - 5394034
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||| ||||||||||||  ||||| | ||||||| ||  ||||||||| |||  | |||||  |  ||||||||||||||  |||||||| | |||||||    
T  5394214 aaaattcggtatccgatctaaggaccgactaatccgaacggaccaatcccaccgcccacttgcggcggccccatttaaagtcagagcaaa-ctctgtatg 5394116  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacc 188  Q
     |||| | ||||||||||||  ||||||| ||||||| ||| | |||||  ||| | || | ||||||||||||| ||||||    
T  5394115 gacttagcccatcgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 8299859 - 8299892
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatc 41  Q
    |||||||||||||||||||||| |||||||||||    
T  8299859 aaaactcggtatccgattcaagaatcaactaatc 8299892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 11941210 - 11941414
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  11941210 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatg 11941308  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||   ||| | ||||||| |||| || |||| || ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  11941309 gacttaacccaccaaaattggcaccatagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 11941408  T
Q  207 gagtta 212  Q
    | ||||    
T  11941409 gggtta 11941414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 4852579 - 4852551
Alignment:
Q  184 caaccactaggtcaaccccaaatgagtta 212  Q
    |||||||||||||||||||||||||||||    
T  4852579 caaccactaggtcaaccccaaatgagtta 4852551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 8024811 - 8024851
Alignment:
Q  149 aaaccttgagagaaacacaatccaagatctcaaaccaacca 189  Q
    ||||||||||||||||||| ||||| ||| |||||||||||    
T  8024811 aaaccttgagagaaacacactccaacatcgcaaaccaacca 8024851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 5082 - 5281
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  5082 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 5180  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  5181 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 5280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 52871 - 53070
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||  ||  | ||| |  | ||||||| |||||||| ||||| |||| |||||||    
T  52871 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatcctaccgcccacctgcgggggccccgtttaaagccagagc-aagctctgtatg 52969  T
Q  108 ta-cttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |  ||| ||| ||||||||| ||||||| ||||||| ||| || |||   ||| | || | ||||||||| ||| |||||||||||| ||| |||||||    
T  52970 gattttgcccaccgaaattggcaccagagggaatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaat 53069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 1057 - 1256
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||    |||||  | |||||||||||||||| ||||||| || |||||||    
T  1057 aaaactcggtatccgat-caagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 1154  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  1155 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 9300 - 9499
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||    |||||  | |||||||||||||||| ||||||| || |||||||    
T  9300 aaaactcggtatccgat-caagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 9397  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  9398 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 9497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 12065 - 12200
Alignment:
Q  73 gggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcc 171  Q
    |||||||||||||||| ||||||| || ||||||| |||| | ||| |||||||||  ||||||  |||||| ||| | ||||   ||| | || | |||    
T  12065 gggccccatttaaagccagagcaa-gctctgtatggacttagcccaccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactcc 12163  T
Q  172 aagatctcaaaccaaccactaggtcaaccccaaatga 208  Q
    |||||| ||| |||||||||||| |||||||||||||    
T  12164 aagatcccaagccaaccactaggccaaccccaaatga 12200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 40521 - 40323
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40521 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40424  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacct-tgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 205  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||| ||| || | || | |||||||||  || |||||||||||| ||||||||||    
T  40423 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcctaagccaaccactaggccaaccccaaa 40325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 29143 - 29340
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| ||||||   ||||||| ||| ||||||||| ||||   || ||  | ||| || |||| |||| |||||||||| |||||||    
T  29143 aaaactcggtatccgatccaaggactgactaatctgaggggaccaatcccactgtccatttgcgggggtcc-attttaagccagagcaaagctctgtatg 29241  T
Q  108 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||  | | ||||| ||| | ||| | ||||||| ||||| |||||||||| |||||| | ||||||  ||| |||||||||||| ||| |||||||    
T  29242 gacttaccgaccgaaaatggcatcagcgggaatcgaacctaagaccttgagaggaacacacttcaagattccaagccaaccactaggccaatcccaaat 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 162006 - 161871
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||| ||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||||||||| ||||| ||||| |||| |||||||    
T  162006 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagc-aagctctgtatg 161908  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcga 143  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  161907 gacttagcccaccgaaattggcaccagagggaatcga 161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 10695 - 10893
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||||| |||| ||  ||||||  ||| ||||||||| |||    ||||| || |||||||||||||||| ||||||| || |||||||    
T  10695 aaaactcggtatccgat-caagaattgactaattcgaggggaccaatcccaccgtccacttgtg-gggccccatttaaagccagagcaa-gctctgtatg 10791  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| |||||||||  ||||||  |||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  10792 gacttagcccaccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 10891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 2426 - 2514
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    ||||||||||||||||||||||||   ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| |||||||    
T  2426 aaaactcggtatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 2514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 66951 - 66863
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| |||||||    
T  66951 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 66863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 97366 - 97565
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||||||||||| | |||  | | ||||||  ||||||||||||| |||  | |||||  | ||| ||| |||||||  ||||||| || |||||||    
T  97366 aaaactcggtatccggtccaaaaaccgactaatacgagaggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaa-gctctgtatg 97464  T
Q  108 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | | ||||||| ||| |||||||||||| |||||||||||    
T  97465 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaat 97564  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 32484 - 32397
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 96  Q
    |||||||||||||||| ||||| ||| ||||||| ||| ||||||||| ||| || |||||  | ||||| |||||||||| |||||||    
T  32484 aaaactcggtatccga-tcaagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaa 32397  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 8568 - 8613
Alignment:
Q  169 tccaagatctcaaaccaaccactaggtcaaccccaaatgagttatt 214  Q
    ||||||||| ||| |||||||||||| |||||||||||| ||||||    
T  8568 tccaagatcccaagccaaccactaggccaaccccaaatgggttatt 8613  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 53145 - 53112
Alignment:
Q  102 tgtatgtacttgtccatcgaaattggtaccagag 135  Q
    |||||| |||||||||||||||||||||||||||    
T  53145 tgtatggacttgtccatcgaaattggtaccagag 53112  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 41645 - 41848
Alignment:
Q  8 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 107  Q
    ||||||| ||||||||| |||| ||| ||||||| ||| ||||||||| || | | |||||    ||||||| |||||||| ||||||| || |||||||    
T  41645 aaaactctgtatccgat-caagaatcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaa-gctctgtatg 41742  T
Q  108 tacttgtc-catcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 206  Q
     ||||  | || ||||||||| || |||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  ||||||||||| |||||||||||    
T  41743 gacttagcacaacgaaattggaacaagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 41842  T
Q  207 gagtta 212  Q
    | ||||    
T  41843 gggtta 41848  T

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