View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14534_low_30 (Length: 203)

Name: NF14534_low_30
Description: NF14534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14534_low_30
NF14534_low_30
[»] chr8 (27 HSPs)
chr8 (16-191)||(8765666-8765844)
chr8 (16-68)||(18532116-18532168)
chr8 (16-68)||(19471618-19471670)
chr8 (16-68)||(19542542-19542594)
chr8 (16-68)||(19590102-19590154)
chr8 (16-68)||(28193483-28193535)
chr8 (16-68)||(34237795-34237847)
chr8 (17-68)||(2618195-2618246)
chr8 (16-68)||(3734763-3734815)
chr8 (16-68)||(4718654-4718706)
chr8 (28-68)||(8042663-8042703)
chr8 (16-56)||(20469938-20469978)
chr8 (16-68)||(39349265-39349317)
chr8 (16-68)||(42643258-42643310)
chr8 (16-54)||(14632977-14633015)
chr8 (16-62)||(21603245-21603291)
chr8 (16-68)||(20305917-20305969)
chr8 (16-68)||(21092550-21092602)
chr8 (16-68)||(27746475-27746527)
chr8 (16-67)||(264539-264590)
chr8 (16-67)||(651331-651382)
chr8 (16-67)||(837066-837117)
chr8 (17-68)||(24018391-24018442)
chr8 (16-61)||(15259546-15259591)
chr8 (19-68)||(42328014-42328062)
chr8 (16-68)||(7558083-7558135)
chr8 (28-68)||(26169000-26169040)
[»] chr7 (32 HSPs)
chr7 (16-68)||(7799972-7800024)
chr7 (16-68)||(2103064-2103116)
chr7 (16-68)||(7176002-7176054)
chr7 (16-68)||(7275286-7275338)
chr7 (16-68)||(21217973-21218025)
chr7 (16-68)||(21835160-21835212)
chr7 (16-68)||(22119897-22119949)
chr7 (16-68)||(23854405-23854457)
chr7 (16-68)||(40543050-40543102)
chr7 (16-71)||(42913653-42913708)
chr7 (18-68)||(18044116-18044166)
chr7 (16-62)||(22299864-22299910)
chr7 (16-61)||(10091204-10091249)
chr7 (16-68)||(2751280-2751332)
chr7 (16-68)||(13332563-13332615)
chr7 (16-60)||(17212070-17212114)
chr7 (16-68)||(19421240-19421292)
chr7 (16-60)||(22703503-22703547)
chr7 (17-68)||(28003845-28003896)
chr7 (17-68)||(39145793-39145844)
chr7 (16-62)||(32849606-32849652)
chr7 (16-61)||(11997865-11997910)
chr7 (19-68)||(27312161-27312210)
chr7 (28-68)||(2344308-2344348)
chr7 (16-60)||(25333436-25333480)
chr7 (16-68)||(27009368-27009420)
chr7 (16-68)||(28089825-28089877)
chr7 (16-68)||(31713035-31713087)
chr7 (17-68)||(23012649-23012700)
chr7 (16-61)||(31197607-31197652)
chr7 (28-64)||(24686133-24686169)
chr7 (16-68)||(43785439-43785491)
[»] scaffold0623 (1 HSPs)
scaffold0623 (16-68)||(1196-1248)
[»] scaffold0459 (1 HSPs)
scaffold0459 (16-68)||(10833-10885)
[»] scaffold0366 (2 HSPs)
scaffold0366 (16-68)||(9439-9491)
scaffold0366 (16-68)||(12140-12192)
[»] scaffold0199 (1 HSPs)
scaffold0199 (16-68)||(8547-8599)
[»] chr6 (19 HSPs)
chr6 (16-68)||(9238980-9239032)
chr6 (16-68)||(11448876-11448928)
chr6 (16-68)||(22576072-22576124)
chr6 (16-68)||(11007170-11007222)
chr6 (16-68)||(12591642-12591694)
chr6 (16-68)||(13753245-13753297)
chr6 (16-68)||(15360238-15360290)
chr6 (17-68)||(21982461-21982512)
chr6 (16-66)||(14212899-14212949)
chr6 (16-61)||(9843950-9843995)
chr6 (16-68)||(34147351-34147403)
chr6 (16-68)||(34159967-34160019)
chr6 (16-50)||(654286-654320)
chr6 (16-54)||(28968182-28968220)
chr6 (16-68)||(1344942-1344992)
chr6 (16-61)||(17081194-17081239)
chr6 (30-67)||(21148664-21148701)
chr6 (28-68)||(3222786-3222826)
chr6 (28-68)||(33499479-33499519)
[»] chr5 (35 HSPs)
chr5 (16-68)||(1827670-1827722)
chr5 (16-68)||(8484801-8484853)
chr5 (16-68)||(22392706-22392758)
chr5 (16-68)||(25586937-25586989)
chr5 (16-68)||(33709641-33709693)
chr5 (16-68)||(38631101-38631153)
chr5 (16-62)||(15641245-15641291)
chr5 (16-68)||(6014420-6014472)
chr5 (16-68)||(11926642-11926694)
chr5 (16-68)||(13038594-13038646)
chr5 (16-68)||(13108589-13108641)
chr5 (16-60)||(15971262-15971306)
chr5 (16-68)||(25750751-25750803)
chr5 (16-68)||(27498871-27498923)
chr5 (16-68)||(31288086-31288138)
chr5 (16-68)||(32059580-32059632)
chr5 (16-64)||(37495056-37495104)
chr5 (16-67)||(42193491-42193542)
chr5 (16-54)||(19456349-19456387)
chr5 (16-54)||(34049841-34049879)
chr5 (28-68)||(4603782-4603822)
chr5 (16-60)||(7085766-7085810)
chr5 (16-68)||(23270662-23270714)
chr5 (16-68)||(34310147-34310199)
chr5 (16-68)||(36954823-36954875)
chr5 (16-68)||(38684213-38684265)
chr5 (22-68)||(3715055-3715101)
chr5 (16-54)||(12398588-12398626)
chr5 (16-54)||(18207226-18207264)
chr5 (16-54)||(30485847-30485885)
chr5 (17-54)||(7151348-7151385)
chr5 (28-68)||(11465059-11465099)
chr5 (28-68)||(12317302-12317342)
chr5 (28-60)||(21042677-21042709)
chr5 (17-61)||(37397725-37397769)
[»] chr4 (25 HSPs)
chr4 (16-68)||(32986202-32986254)
chr4 (16-68)||(33696419-33696471)
chr4 (16-68)||(35229173-35229225)
chr4 (16-68)||(46714397-46714449)
chr4 (16-67)||(19660672-19660723)
chr4 (17-68)||(33992631-33992682)
chr4 (16-62)||(1985847-1985893)
chr4 (19-68)||(20566354-20566403)
chr4 (17-62)||(55961883-55961928)
chr4 (16-68)||(22625210-22625262)
chr4 (16-68)||(25852219-25852271)
chr4 (16-60)||(27528935-27528979)
chr4 (16-68)||(40058992-40059044)
chr4 (16-68)||(52983624-52983676)
chr4 (16-68)||(54127482-54127534)
chr4 (16-54)||(20078124-20078162)
chr4 (16-68)||(34844898-34844950)
chr4 (16-68)||(51535618-51535670)
chr4 (29-68)||(5609355-5609394)
chr4 (21-60)||(34722183-34722222)
chr4 (16-59)||(49287872-49287915)
chr4 (16-62)||(2351024-2351070)
chr4 (16-54)||(7392103-7392141)
chr4 (24-54)||(44343533-44343563)
chr4 (28-68)||(13873447-13873487)
[»] chr3 (34 HSPs)
chr3 (16-68)||(25379766-25379818)
chr3 (16-68)||(30807293-30807345)
chr3 (16-68)||(34492715-34492767)
chr3 (16-68)||(35492916-35492968)
chr3 (16-68)||(45529894-45529946)
chr3 (16-68)||(46576353-46576405)
chr3 (16-68)||(53424316-53424368)
chr3 (16-67)||(26174119-26174170)
chr3 (16-62)||(26108303-26108349)
chr3 (16-61)||(25289854-25289899)
chr3 (16-61)||(40940837-40940882)
chr3 (16-68)||(8456290-8456342)
chr3 (16-68)||(15566639-15566691)
chr3 (16-68)||(21362948-21363000)
chr3 (16-68)||(29915409-29915461)
chr3 (16-68)||(29964562-29964614)
chr3 (16-68)||(30257629-30257681)
chr3 (16-68)||(31537978-31538030)
chr3 (16-68)||(52455789-52455841)
chr3 (16-67)||(52821775-52821826)
chr3 (16-62)||(49258402-49258448)
chr3 (16-61)||(53234050-53234095)
chr3 (16-68)||(40133589-40133641)
chr3 (16-68)||(45272556-45272608)
chr3 (16-68)||(48977393-48977445)
chr3 (16-51)||(39041992-39042027)
chr3 (20-54)||(10083963-10083997)
chr3 (20-54)||(10190886-10190920)
chr3 (16-61)||(9842933-9842978)
chr3 (19-68)||(32151429-32151478)
chr3 (16-60)||(7485665-7485709)
chr3 (16-68)||(25344197-25344249)
chr3 (28-68)||(36660775-36660815)
chr3 (28-68)||(50582997-50583037)
[»] chr2 (20 HSPs)
chr2 (16-68)||(18976565-18976617)
chr2 (16-62)||(27290599-27290645)
chr2 (16-61)||(11941350-11941395)
chr2 (16-61)||(44946193-44946238)
chr2 (16-60)||(10582130-10582174)
chr2 (16-68)||(33827713-33827765)
chr2 (16-68)||(44976294-44976346)
chr2 (16-68)||(4852563-4852615)
chr2 (16-68)||(17324771-17324823)
chr2 (16-60)||(41314005-41314049)
chr2 (19-54)||(34516551-34516586)
chr2 (16-54)||(1191532-1191570)
chr2 (16-54)||(6714421-6714459)
chr2 (16-62)||(19054036-19054082)
chr2 (16-54)||(43374465-43374503)
chr2 (16-61)||(25293178-25293223)
chr2 (16-61)||(40997490-40997535)
chr2 (28-68)||(918851-918891)
chr2 (28-68)||(8192503-8192543)
chr2 (16-68)||(15037964-15038016)
[»] chr1 (32 HSPs)
chr1 (16-68)||(4621377-4621429)
chr1 (16-68)||(7197386-7197438)
chr1 (16-68)||(8077652-8077704)
chr1 (16-68)||(24674398-24674450)
chr1 (16-68)||(34778347-34778399)
chr1 (16-61)||(27455006-27455051)
chr1 (16-68)||(7766867-7766919)
chr1 (16-68)||(15059542-15059594)
chr1 (16-68)||(46113542-46113594)
chr1 (16-62)||(7578420-7578466)
chr1 (16-54)||(33905650-33905688)
chr1 (16-64)||(7946853-7946901)
chr1 (14-62)||(14258565-14258613)
chr1 (16-60)||(17935782-17935826)
chr1 (16-68)||(18646858-18646910)
chr1 (16-60)||(20487330-20487374)
chr1 (16-60)||(24122036-24122080)
chr1 (16-68)||(30677181-30677233)
chr1 (16-68)||(46607815-46607867)
chr1 (28-67)||(25496640-25496679)
chr1 (16-54)||(9500495-9500533)
chr1 (16-54)||(45859183-45859221)
chr1 (35-68)||(1486425-1486458)
chr1 (28-68)||(1138584-1138624)
chr1 (16-68)||(2272349-2272401)
chr1 (28-68)||(6776149-6776189)
chr1 (16-68)||(21726734-21726786)
chr1 (28-68)||(24216983-24217023)
chr1 (16-68)||(29057477-29057529)
chr1 (28-68)||(32729550-32729590)
chr1 (16-68)||(32930754-32930806)
chr1 (28-68)||(47091695-47091735)
[»] scaffold0576 (1 HSPs)
scaffold0576 (16-68)||(5222-5274)
[»] scaffold0328 (1 HSPs)
scaffold0328 (16-68)||(14996-15048)
[»] scaffold0068 (1 HSPs)
scaffold0068 (16-68)||(41784-41836)
[»] scaffold0717 (1 HSPs)
scaffold0717 (16-71)||(98-153)
[»] scaffold0051 (1 HSPs)
scaffold0051 (20-62)||(53015-53057)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-54)||(161828-161866)
[»] scaffold0049 (1 HSPs)
scaffold0049 (16-61)||(66774-66819)
[»] scaffold0460 (1 HSPs)
scaffold0460 (16-60)||(8319-8363)
[»] scaffold0217 (1 HSPs)
scaffold0217 (16-68)||(7449-7501)
[»] scaffold0070 (1 HSPs)
scaffold0070 (16-68)||(40330-40382)
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-68)||(97506-97558)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 8765666 - 8765844
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaaccgaataattgacagcaacaatattgtcaaacactgtaa---aaatacg 112  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||||||| |||||||||||||||||||||||||   |||||||    
T  8765666 gagatctctgggggagcaaactccaagatctcaagccaatcattagctcaacccaataattgacggcaacaatattgtcaaacactgtaaattaaatacg 8765765  T
Q  113 atattgtgnnnnnnnnctcatccaatcataataatggttatgttaggagtattattacacagaagttcacatacaattt 191  Q
    ||||||||        |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8765766 atattgtgttttttttctcatccaatcacaataatggttatgttaggagtattattacacagaagttcacatacaattt 8765844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 18532168 - 18532116
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  18532168 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 18532116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19471670 - 19471618
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  19471670 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 19471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19542594 - 19542542
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  19542594 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 19542542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 19590102 - 19590154
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  19590102 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 19590154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 28193535 - 28193483
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  28193535 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 28193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34237795 - 34237847
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  34237795 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 34237847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 2618246 - 2618195
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  2618246 agacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 2618195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 3734763 - 3734815
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  3734763 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 3734815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 4718706 - 4718654
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||| |||||    
T  4718706 gagacctctgaaggagcaaactccaagatcccaagccaaccactaggccaacc 4718654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 8042703 - 8042663
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  8042703 ggagcaaactccaagatcccaagccaagcactaggtcaacc 8042663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 20469978 - 20469938
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatc 56  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20469978 gagacctctggaggagcaaactccaagatcccaagccaatc 20469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 39349317 - 39349265
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| || |||||    
T  39349317 gagacctctggaggagcaaactccaagatcccaagccaaccactgggccaacc 39349265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 42643258 - 42643310
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  42643258 gagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 42643310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 14633015 - 14632977
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  14633015 gagacctctggaggagcaaactccaagatcccaagccaa 14632977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 21603291 - 21603245
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  21603291 gagacctctggaggagcaaactctaagatcccaagccaaccactagg 21603245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 20305969 - 20305917
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||| ||||||||||||||| ||||||| |||||    
T  20305969 gagacctttggaggagcaaactctaagatcccaagccaaccactaggccaacc 20305917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 21092602 - 21092550
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||| ||||||||||||||| ||||||| |||||    
T  21092602 gagacctttggaggagcaaactctaagatcccaagccaaccactaggccaacc 21092550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 27746475 - 27746527
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| |||||||||||||||||||||| |||| ||||||| |||||    
T  27746475 gagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaacc 27746527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 264539 - 264590
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    |||| |||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  264539 gagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 264590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 651382 - 651331
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    |||| |||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  651382 gagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 651331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 837117 - 837066
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    |||| |||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  837117 gagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 837066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 24018442 - 24018391
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||| ||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  24018442 agacctttggaggagcaaactccaagatcccaagtcaaccactagatcaacc 24018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 15259546 - 15259591
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| |||||||| ||||||||||||| |||| ||||||    
T  15259546 gagacctctggaggagcaaaatccaagatcccaaaccaaccactag 15259591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 42328062 - 42328014
Alignment:
Q  19 acctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||| |||| |||||||||||||||||||||| ||||||| |||||    
T  42328062 acctctggaggag-aaactccaagatcccaagccaaccactaggccaacc 42328014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 7558083 - 7558135
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||| ||||| |||||||||||||||||||||||| ||  |||||| |||||    
T  7558083 gagacttctggaggagcaaactccaagatcccaagctaactactaggccaacc 7558135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 26169000 - 26169040
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||||||||| || ||||||| |||||    
T  26169000 ggagcaaactccaagatcccaagcaaaccactaggccaacc 26169040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 7799972 - 7800024
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  7799972 gagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaacc 7800024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 2103116 - 2103064
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  2103116 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 2103064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 7176002 - 7176054
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  7176002 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 7176054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 7275338 - 7275286
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  7275338 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 7275286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 21217973 - 21218025
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  21217973 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 21218025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 21835212 - 21835160
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  21835212 gagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaacc 21835160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 22119949 - 22119897
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  22119949 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 22119897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 23854457 - 23854405
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  23854457 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 23854405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 40543050 - 40543102
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  40543050 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 40543102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 42913653 - 42913708
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaaccgaa 71  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||    
T  42913653 gagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccgaa 42913708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 18044166 - 18044116
Alignment:
Q  18 gacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  18044166 gacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 18044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 22299910 - 22299864
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  22299910 gagacctctggaggagcaaactccaagatcccaagccaaccactagg 22299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 10091249 - 10091204
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  10091249 gagacctctggaggagcaaactccaagatcccaagccaaccactag 10091204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 2751332 - 2751280
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  2751332 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 2751280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 13332563 - 13332615
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||| || ||||||||||||||||||||||||||| ||||||| |||||    
T  13332563 gagacctcaggaggagcaaactccaagatcccaagccaaccactaggccaacc 13332615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 17212114 - 17212070
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  17212114 gagacctctggaggagcaaactccaagatcccaagccaaccacta 17212070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19421292 - 19421240
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||| |||||||    
T  19421292 gagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaacc 19421240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 22703547 - 22703503
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  22703547 gagacctctggaggagcaaactccaagatcccaagccaaccacta 22703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 28003896 - 28003845
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  28003896 agacttctggaggagcaaactccaagatcccaagccaaccactagatcaacc 28003845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 39145793 - 39145844
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| ||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  39145793 agacatctggaggagcaaactccaagatcccaagtcaaccactaggtcaacc 39145844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 32849652 - 32849606
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  32849652 gagacctctggaggagcaaactccaagatcccaagtcaaccactagg 32849606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 11997910 - 11997865
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||    
T  11997910 gagacctctagaggagcaaactccaagatcccaagccaaccactag 11997865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 27312210 - 27312161
Alignment:
Q  19 acctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||| | ||||||||||||||||||||||||||| ||||||| |||||    
T  27312210 acctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 27312161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 2344348 - 2344308
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  2344348 ggagcaaactccaagatcccaagccaaccactaggccaacc 2344308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 25333480 - 25333436
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||    
T  25333480 gagacctctggagaagcaaactccaagatcccaagccaaccacta 25333436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 27009420 - 27009368
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||  |||||||||||||||||| ||||||| ||||||| |||||    
T  27009420 gagacctctggatgagcaaactccaagatccgaagccaaccactaggccaacc 27009368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 28089877 - 28089825
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||| ||||| |||||||||||||||||| |||||||| ||||||| |||||    
T  28089877 gagacatctggaggagcaaactccaagatctcaagccaaccactaggccaacc 28089825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 31713035 - 31713087
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||| | |||||||||||||||||||||| |||| ||||||| |||||    
T  31713035 gagacctctcgaggagcaaactccaagatcccaaaccaaccactaggccaacc 31713087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 23012649 - 23012700
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||| | ||||||||||||||||||||||||| |||| || |||||    
T  23012649 agacctctggagaagcaaactccaagatcccaagccaaccactgggccaacc 23012700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 31197652 - 31197607
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||| |||||  |||||||||||||||||||||||||| ||||||    
T  31197652 gagacatctggatgagcaaactccaagatcccaagccaaccactag 31197607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 24686133 - 24686169
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtc 64  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  24686133 ggagcaaactccaagatcccaagtcaaccactaggtc 24686169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 43785439 - 43785491
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||| ||| ||||||||||||||| || ||||||||||    
T  43785439 gagacctttggaggagcaatctcaaagatcccaagccaaccattaggtcaacc 43785491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 1196 - 1248
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  1196 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 10833 - 10885
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  10833 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 10885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 9439 - 9491
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  9439 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 12140 - 12192
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  12140 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 12192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 8547 - 8599
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  8547 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 8599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 9239032 - 9238980
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  9239032 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 9238980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 11448928 - 11448876
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  11448928 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 11448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 22576124 - 22576072
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  22576124 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 22576072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 11007222 - 11007170
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||    
T  11007222 gagacctttggaggagcaaactccaagatcccaagccaaccactagatcaacc 11007170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 12591694 - 12591642
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  12591694 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 12591642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 13753297 - 13753245
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  13753297 gagacctctggaggagcaaactccaagatccaaagccaaccactaggccaacc 13753245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 15360238 - 15360290
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  15360238 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 15360290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 21982461 - 21982512
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  21982461 agacctctggaggagcaaacttcaagatcccaagccaaccactaggccaacc 21982512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 14212949 - 14212899
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaa 66  Q
    ||||||||||| |||||||||||||||||||| |||||| || ||||||||    
T  14212949 gagacctctggaggagcaaactccaagatcccgagccaaccattaggtcaa 14212899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 9843995 - 9843950
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||    
T  9843995 gagacctctagaggagcaaactccaagatcccaagccaaccactag 9843950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 34147403 - 34147351
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||| |||||  |||||||||||||||||||||||||| ||||||| |||||    
T  34147403 gagacttctggaagagcaaactccaagatcccaagccaaccactaggccaacc 34147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 34160019 - 34159967
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||| |||||  |||||||||||||||||||||||||| ||||||| |||||    
T  34160019 gagacttctggaagagcaaactccaagatcccaagccaaccactaggccaacc 34159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 654286 - 654320
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaag 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  654286 gagacctctggaggagcaaactccaagatcccaag 654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 28968182 - 28968220
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  28968182 gagacctctagaggagcaaactccaagatcccaagccaa 28968220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 1344992 - 1344942
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||| |||||||||||||||||  |||| |||||||||||||    
T  1344992 gagacctctggaggaacaaactccaagatccca--ccaaccactaggtcaacc 1344942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 17081194 - 17081239
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||| ||||| ||||||||||||||||||| ||||||| ||||||    
T  17081194 gagacatctggaggagcaaactccaagatcctaagccaaccactag 17081239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 21148664 - 21148701
Alignment:
Q  30 agcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  21148664 agcaaactccaagatcccaagccaaccactaggccaac 21148701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 3222786 - 3222826
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  3222786 ggagcaaactgcaagatcccaagccaaccactaggccaacc 3222826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 33499519 - 33499479
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||||||||||||||||||| ||| ||| |||||    
T  33499519 ggagcaaactccaagatcccaagccaaccaccaggccaacc 33499479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 1827670 - 1827722
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  1827670 gagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaacc 1827722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 8484801 - 8484853
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  8484801 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 8484853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 22392758 - 22392706
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  22392758 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 22392706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 25586989 - 25586937
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  25586989 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 25586937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 33709641 - 33709693
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  33709641 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 33709693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 38631101 - 38631153
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  38631101 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 38631153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 15641245 - 15641291
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  15641245 gagacctctggaggagcaaactccaagatcccaagccaaccactagg 15641291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 6014420 - 6014472
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||| |||||    
T  6014420 gagatctctggagaagcaaactccaagatcccaagccaatcactaggccaacc 6014472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 11926642 - 11926694
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  11926642 gagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaacc 11926694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 13038594 - 13038646
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  13038594 gagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaacc 13038646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 13108589 - 13108641
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  13108589 gagatctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 13108641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 15971262 - 15971306
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  15971262 gagacctctggaggagcaaactccaagatcccaagccaaccacta 15971306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 25750751 - 25750803
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  25750751 gagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 25750803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 27498871 - 27498923
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||| | ||||||||||||||||| ||||||||| |||||||||||||    
T  27498871 gagacctctagaggagcaaactccaagattccaagccaaccactaggtcaacc 27498923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 31288086 - 31288138
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  31288086 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 31288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 32059580 - 32059632
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  32059580 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 32059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 37495104 - 37495056
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtc 64  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  37495104 gagacctctggaggagcaaactccaagatctcaagccaaccactaggtc 37495056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 42193542 - 42193491
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||    
T  42193542 gagacctctggggaagcaaactccaagatcccaagtcaaccactaggccaac 42193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 19456349 - 19456387
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  19456349 gagacctctggaggagcaaactccaagatcccaagccaa 19456387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 34049879 - 34049841
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  34049879 gagacctctggaggagcaaactccaagatcccaagccaa 34049841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 4603822 - 4603782
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  4603822 ggagcaaactccaagatcccaagccaaccactaggccaacc 4603782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 7085766 - 7085810
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  7085766 gagacctctggaggagaaaactccaagatcccaagccaaccacta 7085810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 23270662 - 23270714
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| |||  |||||||||||||||||||||||||| ||||||| |||||    
T  23270662 gagacctttggatgagcaaactccaagatcccaagccaaccactaggccaacc 23270714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 34310199 - 34310147
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||| ||||||| | ||||||| |||||    
T  34310199 gagacctctggaggagcaaactccaagattccaagccgaccactaggccaacc 34310147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 36954875 - 36954823
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||| | ||||||||||||||||||||||| ||| ||||||| |||||    
T  36954875 gagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaacc 36954823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 38684265 - 38684213
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||| || |||||    
T  38684265 gagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaacc 38684213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 3715055 - 3715101
Alignment:
Q  22 tctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  3715055 tctggaggagcaaactccaagatcccaaaccaaccactaggccaacc 3715101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 12398588 - 12398626
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  12398588 gagacctttggaggagcaaactccaagatcccaagccaa 12398626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 18207264 - 18207226
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  18207264 gagacctctggaggagcaaactccaagatcccaaaccaa 18207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 30485885 - 30485847
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  30485885 gagacctctgaaggagcaaactccaagatcccaagccaa 30485847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 7151385 - 7151348
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaa 54  Q
    |||||||| | |||||||||||||||||||||||||||    
T  7151385 agacctcttgaggagcaaactccaagatcccaagccaa 7151348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 11465059 - 11465099
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  11465059 ggagcaaactccaagatttcaagccaatcactaggccaacc 11465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 12317302 - 12317342
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||||||||| ||||||||| ||||||| |||||    
T  12317302 ggagcaaactccaagattccaagccaaccactaggccaacc 12317342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 21042677 - 21042709
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcacta 60  Q
    |||||||||||||||||||||| ||||||||||    
T  21042677 ggagcaaactccaagatcccaaaccaatcacta 21042709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 37397769 - 37397725
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||||    
T  37397769 agacctttggaggagcaaactccaagatcacaagccaaccactag 37397725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 32986254 - 32986202
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  32986254 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 32986202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 33696419 - 33696471
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  33696419 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 33696471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 35229225 - 35229173
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  35229225 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 35229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 46714449 - 46714397
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  46714449 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 46714397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 19660672 - 19660723
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  19660672 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 19660723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 33992682 - 33992631
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||||    
T  33992682 agacctctggaggagcaaactccaagatcccaaaccaaccactaggtcaacc 33992631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 1985893 - 1985847
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  1985893 gagacctctggaggagcaaactccaagatcccaagccaaccactagg 1985847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20566403 - 20566354
Alignment:
Q  19 acctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  20566403 acctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 20566354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 55961883 - 55961928
Alignment:
Q  17 agacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||    
T  55961883 agacctctggaggagcaaactccaagatcccaagccaaccactagg 55961928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 22625210 - 22625262
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||| |||||    
T  22625210 gagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacc 22625262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 25852271 - 25852219
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  25852271 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 25852219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 27528935 - 27528979
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  27528935 gagacctctggaggagcaaactccaagatcccaagccaaccacta 27528979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 40058992 - 40059044
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||| |||||    
T  40058992 gagacctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 40059044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 52983676 - 52983624
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||| |||||    
T  52983676 gagacctctggaggagcaaactccaagatctcaagccaaccactaggccaacc 52983624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 54127482 - 54127534
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  54127482 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 54127534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 20078124 - 20078162
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  20078124 gagacctctggaggagcaaactccaagatcccaagccaa 20078162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34844898 - 34844950
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||| ||||| || ||||||| |||||    
T  34844898 gagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaacc 34844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 51535670 - 51535618
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  51535670 gagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaacc 51535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 5609355 - 5609394
Alignment:
Q  29 gagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  5609355 gagcaaactccaagatcccaagccaaccactaggccaacc 5609394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 34722222 - 34722183
Alignment:
Q  21 ctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  34722222 ctctggaggagcaaactccaagatcccaagccaaccacta 34722183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 49287915 - 49287872
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcact 59  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||    
T  49287915 gagacctctggaggagcaaactccaagatcccaaaccaaccact 49287872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 2351070 - 2351024
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| |||||||||| |||||| ||||||||| |||||||    
T  2351070 gagacctctggaggagcaaacttcaagattccaagccaaccactagg 2351024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 7392103 - 7392141
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  7392103 gagacctttggaggagcaaactccaagatcccaagccaa 7392141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 44343563 - 44343533
Alignment:
Q  24 tgggggagcaaactccaagatcccaagccaa 54  Q
    |||||||||||||||||||||||||||||||    
T  44343563 tgggggagcaaactccaagatcccaagccaa 44343533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 13873447 - 13873487
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||||||||| || ||||||| |||||    
T  13873447 ggagcaaactccaagatcccaagcaaaccactaggccaacc 13873487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 25379818 - 25379766
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  25379818 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 25379766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 30807293 - 30807345
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  30807293 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 30807345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34492715 - 34492767
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  34492715 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 34492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 35492968 - 35492916
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  35492968 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 35492916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 45529894 - 45529946
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  45529894 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 45529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 46576405 - 46576353
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  46576405 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 46576353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 53424316 - 53424368
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  53424316 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 53424368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 26174170 - 26174119
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  26174170 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 26174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 26108349 - 26108303
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  26108349 gagacctctggaggagcaaactccaagatcccaagccaaccactagg 26108303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 25289854 - 25289899
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25289854 gagacctctggaggagcaaactccaagatcccaagccaaccactag 25289899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 40940882 - 40940837
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  40940882 gagacctctggaggagcaaactccaagatcccaagccaaccactag 40940837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 8456290 - 8456342
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||    
T  8456290 gagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaacc 8456342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 15566639 - 15566691
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||| |||||    
T  15566639 gagacctctggaggagcaaactccaagatctcaagccaaccactaggccaacc 15566691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 21363000 - 21362948
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  21363000 gagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 21362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 29915409 - 29915461
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  29915409 gagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaacc 29915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 29964562 - 29964614
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  29964562 gagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaacc 29964614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 30257681 - 30257629
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  30257681 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 30257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 31537978 - 31538030
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  31537978 gagacctctggaggagcaaactccaagatcctaagccaaccactaggccaacc 31538030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 52455789 - 52455841
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||| |||||    
T  52455789 gagacctctggaggagcaaactccaagatccctagccaaccactaggccaacc 52455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 52821775 - 52821826
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||    
T  52821775 gagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaac 52821826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 49258402 - 49258448
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||    
T  49258402 gagacctctggaggagcaaactgcaagatcccaagccaaccactagg 49258448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 53234050 - 53234095
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  53234050 gagacttctggaggagcaaactccaagatcccaagccaaccactag 53234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 40133589 - 40133641
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| |||||||||||||| |||||||||||| ||||||| |||||    
T  40133589 gagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaacc 40133641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 45272556 - 45272608
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||| ||||| |||||||||||||||||||||||||||  |||||| |||||    
T  45272556 gagacatctggaggagcaaactccaagatcccaagccaacgactaggccaacc 45272608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 48977445 - 48977393
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  48977445 gagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaacc 48977393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 39041992 - 39042027
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagc 51  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39041992 gagacctctggaggagcaaactccaagatcccaagc 39042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 10083963 - 10083997
Alignment:
Q  20 cctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||| |||||||||||||||||||||||||||    
T  10083963 cctctggaggagcaaactccaagatcccaagccaa 10083997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 10190886 - 10190920
Alignment:
Q  20 cctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||| |||||||||||||||||||||||||||    
T  10190886 cctctggaggagcaaactccaagatcccaagccaa 10190920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 9842978 - 9842933
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| |||| ||||||||||||||||| |||| ||||||    
T  9842978 gagacctctggaggagaaaactccaagatcccaaaccaaccactag 9842933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 32151478 - 32151429
Alignment:
Q  19 acctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| ||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  32151478 acctttggaggagcaaactccaagatcccaagtcaaccactaggccaacc 32151429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 7485665 - 7485709
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||| ||| ||||||||||||||||||||||| ||| |||||    
T  7485665 gagacctttggaggagcaaactccaagatcccaagtcaaccacta 7485709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 25344197 - 25344249
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| |||||| ||||||||||| ||||||||||| ||| ||||||| |||||    
T  25344197 gagatctctggaggagcaaactcgaagatcccaagtcaaccactaggccaacc 25344249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 36660815 - 36660775
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||||||||||| || |||| |||||||||||||    
T  36660815 ggagcaaactccaagatcctaaaccaaccactaggtcaacc 36660775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 50583037 - 50582997
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
T  50583037 ggagcaaactccaagatcccaaaccaaccactaggccaacc 50582997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 18976565 - 18976617
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  18976565 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 18976617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 27290645 - 27290599
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  27290645 gagacctctggaggagcaaactccaagatcccaagccaaccactagg 27290599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 11941350 - 11941395
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  11941350 gagacctctggaggagcaaactccaagatcccaagccaaccactag 11941395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 44946193 - 44946238
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  44946193 gagacctctggaggagcaaactccaagatcccaagccaaccactag 44946238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 10582130 - 10582174
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  10582130 gagacctctggaggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 33827713 - 33827765
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||    
T  33827713 gagacctctggaggagcaatctccaagatcccaagccaaccactaggccaacc 33827765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 44976294 - 44976346
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||||| |||||    
T  44976294 gagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaacc 44976346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 4852615 - 4852563
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||| ||||| ||| |||||||||||||    
T  4852615 gagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaacc 4852563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 17324823 - 17324771
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||| |||| |||| ||||||| |||||    
T  17324823 gagacctctggaggagcaaactccaagataccaaaccaaccactaggccaacc 17324771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 41314049 - 41314005
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||    
T  41314049 gagacctctggaggagcaaactccaagatcccaaaccaaccacta 41314005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 34516551 - 34516586
Alignment:
Q  19 acctctgggggagcaaactccaagatcccaagccaa 54  Q
    |||||||| |||||||||||||||||||||||||||    
T  34516551 acctctggaggagcaaactccaagatcccaagccaa 34516586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 1191570 - 1191532
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  1191570 gagacctctggaggagcaaactccaagatctcaagccaa 1191532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 6714421 - 6714459
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  6714421 gagacctctggaggagcaaactccaagatctcaagccaa 6714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 19054082 - 19054036
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||| ||| |||||| ||||||||||| ||||||||||||||||    
T  19054082 gagacctttggaggagcagactccaagatctcaagccaatcactagg 19054036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 43374465 - 43374503
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  43374465 gagacctctgaaggagcaaactccaagatcccaagccaa 43374503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 25293223 - 25293178
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||| | ||||||||||||||||||||||| ||| ||||||    
T  25293223 gagacctctcgaggagcaaactccaagatcccaagtcaaccactag 25293178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 40997490 - 40997535
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||| ||| ||||||||||||||||||||||| ||| ||||||    
T  40997490 gagacctttggaggagcaaactccaagatcccaagtcaaccactag 40997535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 918851 - 918891
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  918851 ggagcaaacttcaaaatcccaagccaaccactaggtcaacc 918891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 8192503 - 8192543
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||| |||||||||||||||||||| ||||||| |||||    
T  8192503 ggagcacactccaagatcccaagccaaccactaggccaacc 8192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 15038016 - 15037964
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| |||||||||||||||||||| || ||| ||||||| |||||    
T  15038016 gagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaacc 15037964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 4621377 - 4621429
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  4621377 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 4621429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 7197386 - 7197438
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  7197386 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 7197438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 8077704 - 8077652
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  8077704 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 8077652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 24674450 - 24674398
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  24674450 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 24674398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 34778399 - 34778347
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  34778399 gagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 34778347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 27455006 - 27455051
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  27455006 gagacctctggaggagcaaactccaagatcccaagccaaccactag 27455051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 7766867 - 7766919
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||||||||| || ||||||| |||||    
T  7766867 gagacctctggaggagcaaactccaagatcccaagctaaccactaggccaacc 7766919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 15059542 - 15059594
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||| |||||    
T  15059542 gagacctctggaggagcaaactccaagattccaagccaaccactaggccaacc 15059594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 46113542 - 46113594
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  46113542 gagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaacc 46113594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 7578466 - 7578420
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  7578466 gagacctctggaggaacaaactccaagatcccaagccaaccactagg 7578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 33905650 - 33905688
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  33905650 gagacctctggaggagcaaactccaagatcccaagccaa 33905688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 7946901 - 7946853
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtc 64  Q
    ||||||||||| |||||||||| ||||||| |||||||| |||||||||    
T  7946901 gagacctctggaggagcaaacttcaagatctcaagccaaccactaggtc 7946853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 14258565 - 14258613
Alignment:
Q  14 cagagacctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||| ||||| ||| ||||||||||||||||||||||| |||||||    
T  14258565 cagagacatctggaggaacaaactccaagatcccaagccaaccactagg 14258613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 17935826 - 17935782
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||    
T  17935826 gagacctctggaggagcaaactccaagatcccaagtcaaccacta 17935782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 18646910 - 18646858
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| | ||||||||| |||||| |||||||| |||||||||||||    
T  18646910 gagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaacc 18646858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 20487330 - 20487374
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||    
T  20487330 gagacctctggaggagcaaactccaagatcccgagccaaccacta 20487374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 24122080 - 24122036
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||    
T  24122080 gagacctctggaggagcaaaccccaagatcccaagccaaccacta 24122036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 30677233 - 30677181
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| |||||||||||| ||||||||| |||| |||||||||||||    
T  30677233 gagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaacc 30677181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 46607867 - 46607815
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  46607867 gagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaacc 46607815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 25496640 - 25496679
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaac 67  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  25496640 ggagcaatctccaagatcccaagccaatcactaggccaac 25496679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 9500495 - 9500533
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  9500495 gagacctctgaaggagcaaactccaagatcccaagccaa 9500533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 45859183 - 45859221
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  45859183 gagacctctagaggagcaaactccaagatcccaagccaa 45859221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 1486458 - 1486425
Alignment:
Q  35 actccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||||| |||||||||||||    
T  1486458 actccaagatcccaagccaaccactaggtcaacc 1486425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 1138624 - 1138584
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||| ||||||||||| |||||||| |||||||||||||    
T  1138624 ggagcacactccaagatctcaagccaaccactaggtcaacc 1138584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 2272401 - 2272349
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||  ||||||||||| ||||||||||| ||| ||||||| |||||    
T  2272401 gagacctctgtaggagcaaactctaagatcccaagtcaaccactaggccaacc 2272349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 6776189 - 6776149
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
T  6776189 ggagcaaactccaagatcccaaaccaaccactaggccaacc 6776149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 21726786 - 21726734
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| |||||||||| ||||| |||||  ||| |||||||||||||    
T  21726786 gagacctctggaggagcaaacttcaagaacccaaatcaaccactaggtcaacc 21726734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 24217023 - 24216983
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||| |||||||||||||||| ||| |||||||||||||    
T  24217023 ggagcacactccaagatcccaagtcaaccactaggtcaacc 24216983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 29057477 - 29057529
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| | |||||||||||||||||||| |||| ||||||| |||||    
T  29057477 gagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaacc 29057529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 32729590 - 32729550
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  32729590 ggagcaaactcgaagatcccaagccaaccactaggccaacc 32729550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 32930806 - 32930754
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||  |||| |||||||||||| |||| |||| |||||||||||||    
T  32930806 gagacctctgaaggagtaaactccaagattccaaaccaaccactaggtcaacc 32930754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 47091735 - 47091695
Alignment:
Q  28 ggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||||||||||||||||| |||||||| ||||||| |||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaacc 47091695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 5222 - 5274
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  5222 gagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 5274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 15048 - 14996
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||    
T  15048 gagacctctggaggagcaaactccaagatcccaggccaaccactaggccaacc 14996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 41784 - 41836
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  41784 gagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 41836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 98 - 153
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaaccgaa 71  Q
    |||||||||||  ||||||||||||||||| |||||||| ||||||| ||||||||    
T  98 gagacctctggacgagcaaactccaagatcacaagccaaccactaggccaaccgaa 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 53015 - 53057
Alignment:
Q  20 cctctgggggagcaaactccaagatcccaagccaatcactagg 62  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  53015 cctctggaggagcaaactccaagatcccaagccaaccactagg 53057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 161866 - 161828
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaa 54  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  161866 gagacctctggaggagcaaactccaagatcccaagccaa 161828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 66819 - 66774
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactag 61  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  66819 gagacctttggaggagcaaactccaagatcccaagccaaccactag 66774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 8319 - 8363
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcacta 60  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||    
T  8319 gagacctctggaggagcaaactccaagatcccgagccaaccacta 8363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 7449 - 7501
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    |||| |||||| |||||||||||||||||||||||||||  |||||| |||||    
T  7449 gagatctctggaggagcaaactccaagatcccaagccaactactaggccaacc 7501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 40382 - 40330
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||||||  ||||||||||||||||||| ||||||| ||||||| |||||    
T  40382 gagacctctgaaggagcaaactccaagatcctaagccaaccactaggccaacc 40330  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 97506 - 97558
Alignment:
Q  16 gagacctctgggggagcaaactccaagatcccaagccaatcactaggtcaacc 68  Q
    ||||||| ||| |||||||||| |||||||||||||||| ||||||| |||||    
T  97506 gagacctttggaggagcaaactacaagatcccaagccaaccactaggccaacc 97558  T

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