View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14536_high_14 (Length: 237)
Name: NF14536_high_14
Description: NF14536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14536_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 1174325 - 1174545
Alignment:
| Q |
1 |
cagctgtattactaagctgcaatgacaacaagaataatattaataagcagagataatttttgccaaactctatgataacaaaagttgttttgcttgcact |
100 |
Q |
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| T |
1174325 |
cagctgtattactaagctgcaatgacaacaagaataatattaataagcagagataatttttgccaaactctatgataacaaaagttgttttgcttgcact |
1174424 |
T |
|
| Q |
101 |
acaagaaaatcgcagatacggccaaaaacactcgaaaaggcttcatacctcaggaatgataaattttccagtaagcaagcaaacagcaggaagagtacaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1174425 |
acaagaaaatcgcagatacggccaaaaacactcgaaaaggcttcatacctcaggaatgataaattttccagtaagcaagcaaacagcaggaagagtacaa |
1174524 |
T |
|
| Q |
201 |
tatgcaaccaaaggtattgat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
1174525 |
tatgcaaccaaaggtattgat |
1174545 |
T |
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