View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14536_low_11 (Length: 289)
Name: NF14536_low_11
Description: NF14536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14536_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 117 - 283
Target Start/End: Complemental strand, 26881250 - 26881084
Alignment:
| Q |
117 |
tgtgttcttctcttgttccctaattcccgcctggttgcttcctcgattggaacataaactcctattaaaacaacctcctccaccaaaaggagaccggctt |
216 |
Q |
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| T |
26881250 |
tgtgttcttctcttgttccgtaattcccgcctcgttgcttcctcgattagaacataaactcctattaaaacaacctcctcgaccaaaaggagaccggctt |
26881151 |
T |
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| Q |
217 |
tcaccatttctctaagcatcatggccttgggaacaacttcattttggtgagtccacattcctctctg |
283 |
Q |
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| T |
26881150 |
tcaccatttctctaagtatcatggccttgggaacaacttcattttggtgagtccacattcctctctg |
26881084 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 26881291 - 26881255
Alignment:
| Q |
26 |
ttcttgcatcttgattagttttacaatttataaccta |
62 |
Q |
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| T |
26881291 |
ttcttgcatcttgattagttttacaatttataaccta |
26881255 |
T |
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