View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14537_high_5 (Length: 245)
Name: NF14537_high_5
Description: NF14537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14537_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 34502647 - 34502407
Alignment:
| Q |
1 |
tgttcagccccgttccatttcagccaccaccaccgcctctcgagaccgacgacatttccgaacagaaaacaactgaaacaacaaccgctaccgcctctga |
100 |
Q |
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| T |
34502647 |
tgttcagccccgttccatttcagccaccaccaccgcctctcgagaccgacgacatttccgaacagaaaacaactgaaacaacaaccgctaccgcctctga |
34502548 |
T |
|
| Q |
101 |
acgccttccgagaaaagatcctgttgcaatctttcaaggcgttgtaagggattttctcagacgcctcctttac----------tatgattaattaattgt |
190 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
34502547 |
acgccttccgagaaaagaacctgttgcaatctttcaaggcgttgtaagggattttctcagacgcctcctttaccctaatgatgtatgattaattaattgt |
34502448 |
T |
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| Q |
191 |
gatcttattgcttgcattgtgcttttattgtaatccctatg |
231 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
34502447 |
gatcttattgcttgcattgtgcttttattgtaatccttatg |
34502407 |
T |
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