View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14537_low_11 (Length: 236)
Name: NF14537_low_11
Description: NF14537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14537_low_11 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 49814336 - 49814107
Alignment:
| Q |
7 |
atactctctctacttactatttcatcttctccttcttttcttttttcctatttatgttattacattattcattccactaccaacctaaaacatagtgaac |
106 |
Q |
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| T |
49814336 |
atactctctctacgtactatttcatcttctccttcttttcttttttcctatttatgttattacattattcattccactaccaacctaaaacatagtgaac |
49814237 |
T |
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| Q |
107 |
aatttaatagtgacaccacaacagaaagaaaaatcagagaatgaaatatggttggtcttggtgttgtgcttgaagaacaacaaccacataagaaaaagtg |
206 |
Q |
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| T |
49814236 |
aatttaatagtgacaccacaacagaaagaaaaatcagagaatgaaatatggttggtcttggtgttgtgcttgaagaacaacaaccacataagaaaaagtg |
49814137 |
T |
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| Q |
207 |
taatatcaacatcaacaacaacaataacac |
236 |
Q |
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| T |
49814136 |
taatatcaacatcaacaacaacaataacac |
49814107 |
T |
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