View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14538_low_2 (Length: 393)
Name: NF14538_low_2
Description: NF14538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14538_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 51 - 375
Target Start/End: Complemental strand, 45548718 - 45548393
Alignment:
| Q |
51 |
tcgaagaatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt |
150 |
Q |
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| T |
45548718 |
tcgaaaaatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt |
45548619 |
T |
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| Q |
151 |
gaatatgacaaccatactatggaagttttttatgt-atttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt |
249 |
Q |
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| T |
45548618 |
gaatatgacaaccatactatgaaagttttttatgttatttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt |
45548519 |
T |
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| Q |
250 |
tcattagaaagaagagtttcctcctttattaagttactataaaactttaacatggagtaaaatcttttaaattgagtacatttcttataaaatgatttat |
349 |
Q |
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| T |
45548518 |
tcattagaaagaagagtttcctcctttattaagttactataaaactttaacatggagtaaaatcttttaaattgagtacatttcttataaaatgatttat |
45548419 |
T |
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| Q |
350 |
cgacattactttctcatatttgagtt |
375 |
Q |
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| T |
45548418 |
cgacattactttctcatatttgagtt |
45548393 |
T |
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