View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1453_high_13 (Length: 318)

Name: NF1453_high_13
Description: NF1453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1453_high_13
NF1453_high_13
[»] scaffold0543 (1 HSPs)
scaffold0543 (73-310)||(5240-5479)
[»] scaffold0492 (1 HSPs)
scaffold0492 (73-310)||(6786-7025)
[»] chr2 (11 HSPs)
chr2 (273-310)||(10553150-10553187)
chr2 (273-310)||(33676789-33676826)
chr2 (267-310)||(25915227-25915270)
chr2 (273-310)||(15265542-15265579)
chr2 (273-310)||(21920373-21920410)
chr2 (273-310)||(21925676-21925713)
chr2 (273-310)||(24005153-24005190)
chr2 (273-310)||(24100643-24100680)
chr2 (273-310)||(35190405-35190442)
chr2 (273-309)||(9415109-9415145)
chr2 (273-305)||(36080202-36080234)
[»] chr3 (20 HSPs)
chr3 (273-309)||(30427343-30427379)
chr3 (273-310)||(22102392-22102429)
chr3 (273-310)||(22177340-22177377)
chr3 (273-310)||(25842312-25842349)
chr3 (273-309)||(17438821-17438857)
chr3 (274-310)||(33091421-33091457)
chr3 (276-310)||(38277825-38277859)
chr3 (273-310)||(2454139-2454176)
chr3 (273-310)||(3418764-3418801)
chr3 (273-310)||(5492547-5492584)
chr3 (273-310)||(17476336-17476373)
chr3 (273-310)||(21824485-21824522)
chr3 (273-310)||(26130749-26130786)
chr3 (273-310)||(30102603-30102640)
chr3 (273-310)||(39903972-39904009)
chr3 (273-310)||(41923302-41923339)
chr3 (273-310)||(49429734-49429771)
chr3 (273-310)||(52957657-52957694)
chr3 (273-309)||(25012651-25012687)
chr3 (278-310)||(50098982-50099014)
[»] scaffold0123 (1 HSPs)
scaffold0123 (266-310)||(28704-28749)
[»] scaffold0013 (1 HSPs)
scaffold0013 (273-310)||(41609-41646)
[»] chr8 (15 HSPs)
chr8 (273-310)||(5626203-5626240)
chr8 (273-310)||(15919610-15919647)
chr8 (273-309)||(1526188-1526224)
chr8 (272-310)||(24852448-24852486)
chr8 (273-307)||(30800655-30800689)
chr8 (273-310)||(1170477-1170514)
chr8 (273-310)||(11352784-11352821)
chr8 (273-310)||(23085413-23085450)
chr8 (273-310)||(24024007-24024044)
chr8 (273-310)||(27020556-27020593)
chr8 (273-310)||(33192584-33192621)
chr8 (273-310)||(34966672-34966709)
chr8 (273-310)||(41942544-41942581)
chr8 (273-309)||(23086568-23086604)
chr8 (273-309)||(45488944-45488980)
[»] chr7 (13 HSPs)
chr7 (273-310)||(19371697-19371734)
chr7 (273-310)||(23050839-23050876)
chr7 (273-309)||(5800721-5800757)
chr7 (273-309)||(16683316-16683352)
chr7 (273-309)||(17657552-17657588)
chr7 (273-309)||(21766270-21766306)
chr7 (273-308)||(39465801-39465836)
chr7 (273-310)||(4998161-4998198)
chr7 (273-310)||(27512732-27512769)
chr7 (273-310)||(29366206-29366243)
chr7 (273-310)||(36609899-36609936)
chr7 (273-310)||(48624846-48624883)
chr7 (273-309)||(9334674-9334710)
[»] chr5 (17 HSPs)
chr5 (273-310)||(5025628-5025665)
chr5 (273-310)||(38162425-38162462)
chr5 (273-309)||(1612046-1612082)
chr5 (273-309)||(23270434-23270470)
chr5 (276-310)||(24250919-24250953)
chr5 (273-307)||(26647114-26647148)
chr5 (273-307)||(26918698-26918732)
chr5 (273-310)||(7464162-7464199)
chr5 (273-310)||(12659403-12659440)
chr5 (273-310)||(17210539-17210576)
chr5 (273-310)||(19128659-19128696)
chr5 (273-310)||(19650683-19650720)
chr5 (273-310)||(36226440-36226477)
chr5 (273-310)||(36954084-36954121)
chr5 (273-309)||(16611050-16611086)
chr5 (273-309)||(25782061-25782097)
chr5 (274-310)||(30331880-30331916)
[»] chr4 (14 HSPs)
chr4 (273-310)||(9779241-9779278)
chr4 (273-310)||(27376391-27376428)
chr4 (273-310)||(47931404-47931441)
chr4 (273-309)||(5662081-5662117)
chr4 (273-310)||(1580083-1580120)
chr4 (273-310)||(5498694-5498731)
chr4 (273-310)||(20702328-20702365)
chr4 (273-310)||(20818255-20818292)
chr4 (273-310)||(35447724-35447761)
chr4 (273-310)||(37830906-37830943)
chr4 (273-310)||(38374581-38374618)
chr4 (273-310)||(51400183-51400220)
chr4 (273-309)||(7438313-7438349)
chr4 (273-309)||(27551125-27551161)
[»] chr1 (22 HSPs)
chr1 (273-310)||(11407250-11407287)
chr1 (273-310)||(43575706-43575743)
chr1 (273-310)||(47402861-47402898)
chr1 (273-307)||(773718-773752)
chr1 (271-309)||(21819652-21819690)
chr1 (273-311)||(27307727-27307765)
chr1 (273-310)||(11344911-11344948)
chr1 (273-310)||(12269208-12269245)
chr1 (273-310)||(15597304-15597341)
chr1 (273-310)||(16424456-16424493)
chr1 (273-310)||(19274907-19274944)
chr1 (273-310)||(24005106-24005143)
chr1 (273-310)||(29689374-29689411)
chr1 (273-310)||(33934227-33934264)
chr1 (273-310)||(43577551-43577588)
chr1 (273-310)||(48419961-48419998)
chr1 (274-310)||(4242041-4242077)
chr1 (273-309)||(14386841-14386876)
chr1 (273-309)||(19285513-19285549)
chr1 (273-309)||(32305528-32305564)
chr1 (274-310)||(36605558-36605594)
chr1 (273-309)||(44921994-44922030)
[»] chr6 (8 HSPs)
chr6 (278-310)||(7205285-7205317)
chr6 (273-310)||(10343457-10343494)
chr6 (273-310)||(28712047-28712084)
chr6 (273-309)||(13629261-13629297)
chr6 (273-309)||(13630021-13630057)
chr6 (273-309)||(13698261-13698297)
chr6 (273-309)||(17942721-17942757)
chr6 (273-309)||(32333354-32333390)
[»] scaffold0265 (1 HSPs)
scaffold0265 (271-309)||(13119-13157)
[»] scaffold0068 (1 HSPs)
scaffold0068 (262-310)||(57656-57705)
[»] scaffold0063 (1 HSPs)
scaffold0063 (273-310)||(52185-52222)
[»] scaffold0128 (1 HSPs)
scaffold0128 (273-309)||(43188-43224)
[»] scaffold0037 (2 HSPs)
scaffold0037 (273-309)||(57063-57099)
scaffold0037 (273-309)||(64188-64224)


Alignment Details
Target: scaffold0543 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 5479 - 5240
Alignment:
Q  73 gtgtaaacagtgtatccggaaaaggaatgcaacgccatatagagaggacttatgagctccgaaattgtagagattttatatatagcaacgaaaataaata 172  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5479 gtgtaaaccgtgtatccggaaaaggaatgcaacgccatatagagaggacttatgagctccgaaattgtagagattttatatatagcaacgaaaataaata 5380  T
Q  173 agaaagattgtggatattttgtgatgatctgaaccgaaagattcatg--nnnnnnnnnaatgacacaaacaacaatttcattataaaaataaaataaaat 270  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||           |||||||||||||||||||| |||||||||||||||||||||    
T  5379 agaaagattgtggatattttgtgatgatttgaaccgaaagattcatgtttttttttttaatgacacaaacaacaattttattataaaaataaaataaaat 5280  T
Q  271 tgttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5279 tgttaagggtataattgggataacgaaaaagtaagtataa 5240  T

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Target: scaffold0492 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 7025 - 6786
Alignment:
Q  73 gtgtaaacagtgtatccggaaaaggaatgcaacgccatatagagaggacttatgagctccgaaattgtagagattttatatatagcaacgaaaataaata 172  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7025 gtgtaaaccgtgtatccggaaaaggaatgcaacgccatatagagaggacttatgagctccgaaattgtagagattttatatatagcaacgaaaataaata 6926  T
Q  173 agaaagattgtggatattttgtgatgatctgaaccgaaagattcatg--nnnnnnnnnaatgacacaaacaacaatttcattataaaaataaaataaaat 270  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||           |||||||||||||||||||| |||||||||||||||||||||    
T  6925 agaaagattgtggatattttgtgatgatttgaaccgaaagattcatgtttttttttttaatgacacaaacaacaattttattataaaaataaaataaaat 6826  T
Q  271 tgttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6825 tgttaagggtataattgggataacgaaaaagtaagtataa 6786  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 10553187 - 10553150
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10553187 ttaagggtataattgggataacgaaaaagtaagtataa 10553150  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 33676789 - 33676826
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  33676789 ttaagggtataattgggataatgaaaaagtaagtataa 33676826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 25915227 - 25915270
Alignment:
Q  267 aaattgttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||    
T  25915227 aaattcttaagggtataattgtgataatgaaaaagtaagtataa 25915270  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 15265579 - 15265542
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  15265579 ttaagggtataattgggataacgtaaaagtatgtataa 15265542  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 21920410 - 21920373
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  21920410 ttaagggtataattaggataatgaaaaagtaagtataa 21920373  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 21925713 - 21925676
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  21925713 ttaagggtataattaggataatgaaaaagtaagtataa 21925676  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 24005153 - 24005190
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  24005153 ttaagggtataattggaataatgaaaaagtaagtataa 24005190  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 24100680 - 24100643
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  24100680 ttaagggtataatttggataatgaaaaagtaagtataa 24100643  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 35190405 - 35190442
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  35190405 ttaagggtataattgggataatgaaaaagtaattataa 35190442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 9415109 - 9415145
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  9415109 ttaagggtataattgagataatgaaaaagtaagtata 9415145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 36080234 - 36080202
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaag 305  Q
    ||||||||||||||||||||| |||||||||||    
T  36080234 ttaagggtataattgggataatgaaaaagtaag 36080202  T

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Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 30427379 - 30427343
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||||||||||||||||||||||||||||||||||||    
T  30427379 ttaagggtataattgggataacgaaaaagtaagtata 30427343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 22102429 - 22102392
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22102429 ttaagggtataattgggataatgaaaaagtaagtataa 22102392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 22177377 - 22177340
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22177377 ttaagggtataattgggataatgaaaaagtaagtataa 22177340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 25842349 - 25842312
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25842349 ttaagggtataattgggataatgaaaaagtaagtataa 25842312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 17438821 - 17438857
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17438821 ttaagagtataattgggataacgaaaaagtaagtata 17438857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 33091457 - 33091421
Alignment:
Q  274 taagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  33091457 taagggtataattgggataatgaaaaagtaagtataa 33091421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Original strand, 38277825 - 38277859
Alignment:
Q  276 agggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||||| ||||||||||||||||    
T  38277825 agggtataattgggataatgaaaaagtaagtataa 38277859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 2454176 - 2454139
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  2454176 ttaagggtataattggaataatgaaaaagtaagtataa 2454139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 3418801 - 3418764
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  3418801 ttaagggtataattggaataatgaaaaagtaagtataa 3418764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 5492547 - 5492584
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  5492547 ttaaaggtataattgggataatgaaaaagtaagtataa 5492584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 17476373 - 17476336
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  17476373 ttaagcgtataattgggataacaaaaaagtaagtataa 17476336  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 21824485 - 21824522
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  21824485 ttaagggtataattgagataatgaaaaagtaagtataa 21824522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 26130786 - 26130749
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  26130786 ttaagggtataattgagataacgcaaaagtaagtataa 26130749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 30102603 - 30102640
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  30102603 ttaagggtataattgagataatgaaaaagtaagtataa 30102640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 39903972 - 39904009
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  39903972 ttaagggtataattgagataatgaaaaagtaagtataa 39904009  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 41923339 - 41923302
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  41923339 ttaagggtataattgagataatgaaaaagtaagtataa 41923302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 49429734 - 49429771
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  49429734 ttaagggtataattgagataatgaaaaagtaagtataa 49429771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 52957657 - 52957694
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  52957657 ttaagggtataattgggataatgaaaaagtaaatataa 52957694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 25012651 - 25012687
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  25012651 ttaagggtataattgagataatgaaaaagtaagtata 25012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 50099014 - 50098982
Alignment:
Q  278 ggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| ||||||||||||||||    
T  50099014 ggtataattgggataatgaaaaagtaagtataa 50098982  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 28704 - 28749
Alignment:
Q  266 aaaattgt-taagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  28704 aaaattgtgtaagggtataattgggataatgaaaaagtaagtataa 28749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 41609 - 41646
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  41609 ttaagggtataattgggataatgaaaaagtaagtataa 41646  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 5626203 - 5626240
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  5626203 ttaagggtataattgggataatgaaaaagtaagtataa 5626240  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 15919610 - 15919647
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15919610 ttaagggtataattgggataatgaaaaagtaagtataa 15919647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 1526188 - 1526224
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1526188 ttaagggtataattgggataatgaaaaagtaagtata 1526224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 24852486 - 24852448
Alignment:
Q  272 gttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  24852486 gttaagggtataactgggataatgaaaaagtaagtataa 24852448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Original strand, 30800655 - 30800689
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagta 307  Q
    ||||||||||||||||||||| |||||||||||||    
T  30800655 ttaagggtataattgggataatgaaaaagtaagta 30800689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 1170514 - 1170477
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  1170514 ttaagggtataattgggataatgaaaaggtaagtataa 1170477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 11352821 - 11352784
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  11352821 ttaagggtataattgcgataatgaaaaagtaagtataa 11352784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 23085450 - 23085413
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  23085450 ttaagggtataattgagataatgaaaaagtaagtataa 23085413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 24024007 - 24024044
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  24024007 ttaagggtataatttggataatgaaaaagtaagtataa 24024044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 27020556 - 27020593
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  27020556 ttaagggtataattgagataatgaaaaagtaagtataa 27020593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 33192584 - 33192621
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  33192584 ttaagagtataattgggataatgaaaaagtaagtataa 33192621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 34966709 - 34966672
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  34966709 ttaagggtataattgagataatgaaaaagtaagtataa 34966672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 41942544 - 41942581
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  41942544 ttaagggtataattgagataatgaaaaagtaagtataa 41942581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 23086604 - 23086568
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||||||||||||||| |||| |||||||||||||||    
T  23086604 ttaagggtataattggaataatgaaaaagtaagtata 23086568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 45488980 - 45488944
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||| | |||||||||||||||    
T  45488980 ttaagggtataattgggatgatgaaaaagtaagtata 45488944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 19371734 - 19371697
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  19371734 ttaagggtataattgggataatgaaaaagtaagtataa 19371697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 23050876 - 23050839
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  23050876 ttaagggtataattgggataatgaaaaagtaagtataa 23050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 5800757 - 5800721
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5800757 ttaagggtataattgggataatgaaaaagtaagtata 5800721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 16683316 - 16683352
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16683316 ttaagggtataattgagataacgaaaaagtaagtata 16683352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 17657552 - 17657588
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17657552 ttaagggtataattgagataacgaaaaagtaagtata 17657588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 21766270 - 21766306
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||||||||||||    
T  21766270 ttaagggtataattgggataatgaaaaagtaagtata 21766306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 39465836 - 39465801
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtat 308  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39465836 ttaagggtataattgggataatgaaaaagtaagtat 39465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 4998198 - 4998161
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  4998198 ttaaggatataattgggataatgaaaaagtaagtataa 4998161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 27512732 - 27512769
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  27512732 ttaagggtataattgagataaggaaaaagtaagtataa 27512769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 29366206 - 29366243
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||||||||  |||||||||||||||    
T  29366206 ttaagggtataattgggataattaaaaagtaagtataa 29366243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 36609899 - 36609936
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  36609899 ttaagggtataattgagataatgaaaaagtaagtataa 36609936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 48624846 - 48624883
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||||||||  |||||||||||||||    
T  48624846 ttaagggtataattgggataataaaaaagtaagtataa 48624883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 9334710 - 9334674
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||||||||||||||||| || |||||||||||||||    
T  9334710 ttaagggtataattgggaaaatgaaaaagtaagtata 9334674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 5025665 - 5025628
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  5025665 ttaagggtataattgggataatgaaaaagtaagtataa 5025628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 38162425 - 38162462
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  38162425 ttaagggtataattgggataatgaaaaagtaagtataa 38162462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 1612046 - 1612082
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1612046 ttaagggtataattgggataatgaaaaagtaagtata 1612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 23270470 - 23270434
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23270470 ttaagggtataattgggataatgaaaaagtaagtata 23270434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Complemental strand, 24250953 - 24250919
Alignment:
Q  276 agggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||||| ||||||||||||||||    
T  24250953 agggtataattgggataaagaaaaagtaagtataa 24250919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 26647148 - 26647114
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagta 307  Q
    |||||||||||||| ||||||||||||||||||||    
T  26647148 ttaagggtataattaggataacgaaaaagtaagta 26647114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 26918732 - 26918698
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagta 307  Q
    |||||||||||||| ||||||||||||||||||||    
T  26918732 ttaagggtataattaggataacgaaaaagtaagta 26918698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 7464162 - 7464199
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  7464162 ttaagggtataattgagataatgaaaaagtaagtataa 7464199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 12659403 - 12659440
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||||||||  |||||||||||||||    
T  12659403 ttaagggtataattgggataattaaaaagtaagtataa 12659440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 17210576 - 17210539
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  17210576 ttaagggtataattgagataatgaaaaagtaagtataa 17210539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 19128659 - 19128696
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  19128659 ttaagggtataattggaataatgaaaaagtaagtataa 19128696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 19650720 - 19650683
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  19650720 ttaaaggtataattgggataatgaaaaagtaagtataa 19650683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 36226477 - 36226440
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  36226477 ttaagggtataattgagataatgaaaaagtaagtataa 36226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 36954084 - 36954121
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  36954084 ttaagagtataattgggataatgaaaaagtaagtataa 36954121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 16611050 - 16611086
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  16611050 ttaagagtataattgggataatgaaaaagtaagtata 16611086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 25782061 - 25782097
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||| | |||||||||||||||    
T  25782061 ttaagggtataattgggatgatgaaaaagtaagtata 25782097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 30331916 - 30331880
Alignment:
Q  274 taagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  30331916 taagtgtataattgggataatgaaaaagtaagtataa 30331880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 9779241 - 9779278
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9779241 ttaagggtataattgggataatgaaaaagtaagtataa 9779278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 27376391 - 27376428
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  27376391 ttaagggtataattgggataatgaaaaagtaagtataa 27376428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 47931404 - 47931441
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  47931404 ttaagggtataattgggataaagaaaaagtaagtataa 47931441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 5662117 - 5662081
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||| ||||||||||||||||||||||||||||||||    
T  5662117 ttaaaggtataattgggataacgaaaaagtaagtata 5662081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 1580083 - 1580120
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  1580083 ttaaaggtataattgggataatgaaaaagtaagtataa 1580120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 5498731 - 5498694
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  5498731 ttaagggtataattggggtaatgaaaaagtaagtataa 5498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 20702365 - 20702328
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  20702365 ttaagggtataattggaataatgaaaaagtaagtataa 20702328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 20818255 - 20818292
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  20818255 ttaagggtataattgggatagtgaaaaagtaagtataa 20818292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 35447724 - 35447761
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  35447724 ttaagggtataattgagataatgaaaaagtaagtataa 35447761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 37830943 - 37830906
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  37830943 ttaagggtataattgggataatgaaaatgtaagtataa 37830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 38374618 - 38374581
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  38374618 ttaagggtataattgggataatgaaaaagtaattataa 38374581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 51400183 - 51400220
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  51400183 ttaatggtataattgggataatgaaaaagtaagtataa 51400220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 7438313 - 7438349
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  7438313 ttaagggtataattgggataatgaaaaaataagtata 7438349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 27551125 - 27551161
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  27551125 ttaagggtataattgggataatgaaaaaataagtata 27551161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 11407287 - 11407250
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  11407287 ttaagggtataattgggataatgaaaaagtaagtataa 11407250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 43575706 - 43575743
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  43575706 ttaagggtataattgggataatgaaaaagtaagtataa 43575743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 47402861 - 47402898
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  47402861 ttaagggtataattgggataatgaaaaagtaagtataa 47402898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 773752 - 773718
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagta 307  Q
    ||||||||||||||||||||| |||||||||||||    
T  773752 ttaagggtataattgggataatgaaaaagtaagta 773718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 21819652 - 21819690
Alignment:
Q  271 tgttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  21819652 tgttaagggtataattgggataatgacaaagtaagtata 21819690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 27307727 - 27307765
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataat 311  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  27307727 ttaagggtataatttggataaagaaaaagtaagtataat 27307765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 11344948 - 11344911
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  11344948 ttaagagtataattgggataatgaaaaagtaagtataa 11344911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 12269245 - 12269208
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12269245 ttaagggtataattggaataatgaaaaagtaagtataa 12269208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 15597341 - 15597304
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  15597341 ttaagggtataattgggatattgaaaaagtaagtataa 15597304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 16424493 - 16424456
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  16424493 ttaagggtataattgtgataacgaacaagtaagtataa 16424456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 19274944 - 19274907
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  19274944 ttaagggtataattgtgataatgaaaaagtaagtataa 19274907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 24005106 - 24005143
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  24005106 ttaagggtataattgggataatgaaaacgtaagtataa 24005143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 29689411 - 29689374
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  29689411 ttaagggtataattgagataatgaaaaagtaagtataa 29689374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 33934227 - 33934264
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  33934227 ttaagggtataattgagataatgaaaaagtaagtataa 33934264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 43577551 - 43577588
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  43577551 ttaagggtataattgggataatgaaaaattaagtataa 43577588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 48419998 - 48419961
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  48419998 ttaatggtataattgggataatgaaaaagtaagtataa 48419961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 4242077 - 4242041
Alignment:
Q  274 taagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  4242077 taagggtataattggaataaagaaaaagtaagtataa 4242041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 14386876 - 14386841
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14386876 ttaagggtataattgg-ataacgaaaaagtaagtata 14386841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 19285513 - 19285549
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  19285513 ttaagggtataattgggataatgaaaaagtaaatata 19285549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 32305564 - 32305528
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||| |||||||||||||||| |||||||||||||||    
T  32305564 ttaatggtataattgggataatgaaaaagtaagtata 32305528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 36605558 - 36605594
Alignment:
Q  274 taagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  36605558 taagagtataattgggataatgaaaaagtaagtataa 36605594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 44921994 - 44922030
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  44921994 ttaagggtataattgagataatgaaaaagtaagtata 44922030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 7205285 - 7205317
Alignment:
Q  278 ggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||||||||||||||||||||    
T  7205285 ggtataattgggataacgaaaaagtaagtataa 7205317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 10343457 - 10343494
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  10343457 ttaagggtataattggaataatgaaaaagtaagtataa 10343494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 28712047 - 28712084
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  28712047 ttaagggtataattgagataatgaaaaagtaagtataa 28712084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 13629297 - 13629261
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||||||||||||||| |||| |||||||||||||||    
T  13629297 ttaagggtataattggaataatgaaaaagtaagtata 13629261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 13630021 - 13630057
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  13630021 ttaagggtataattgggataatgaaaaaataagtata 13630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 13698297 - 13698261
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||||||||||||||| |||| |||||||||||||||    
T  13698297 ttaagggtataattggaataatgaaaaagtaagtata 13698261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 17942757 - 17942721
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||| | |||||||||||||||    
T  17942757 ttaagggtataattgggatgatgaaaaagtaagtata 17942721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 32333354 - 32333390
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    |||||||||||||| |||||| |||||||||||||||    
T  32333354 ttaagggtataattaggataatgaaaaagtaagtata 32333390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 13157 - 13119
Alignment:
Q  271 tgttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  13157 tgttaagggtataattgggataatgacaaagtaagtata 13119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 57656 - 57705
Alignment:
Q  262 aaataaaatt-gttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    |||||||||| |||||| ||||||||||||||| |||||||||| |||||    
T  57656 aaataaaatttgttaagagtataattgggataatgaaaaagtaaatataa 57705  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 52222 - 52185
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtataa 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  52222 ttaagggtataattgagataatgaaaaagtaagtataa 52185  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 43188 - 43224
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  43188 ttaagagtataattaggataacgaaaaagtaagtata 43224  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 57099 - 57063
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  57099 ttaagggtataattgagataatgaaaaagtaagtata 57063  T

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Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 64224 - 64188
Alignment:
Q  273 ttaagggtataattgggataacgaaaaagtaagtata 309  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  64224 ttaagggtataattgagataatgaaaaagtaagtata 64188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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