View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1453_high_15 (Length: 298)
Name: NF1453_high_15
Description: NF1453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1453_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 5 - 295
Target Start/End: Complemental strand, 50749242 - 50748952
Alignment:
| Q |
5 |
attaatgtcactttgatcaataataatttacccctttccccaaatatatannnnnnnaaattaccatattcctattaaatatggaaatatcaccctccct |
104 |
Q |
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| T |
50749242 |
attaatgtcactttgatcaataataatttacccctttccccaaatatatatttttttaaattaccatattcctattaaatatggaaatatcaccctccct |
50749143 |
T |
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| Q |
105 |
caatatataatattctcctgtaccttgttttccttttcaatggcaacatttggtccagttggaagagctttatattctcctgaacctaaccaaaaagaaa |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50749142 |
caatatataatattctcctgtaccttgttttccttttcaatggcaacatttggtccagttggaagagctttatattctcctgaacctaaccaaaaagaaa |
50749043 |
T |
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| Q |
205 |
ttgaatacactctgacatcaggaaaaataatggtccaggacaactttattttgttttgggaaaataatcctgaactcaccatttgattctt |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50749042 |
ttgaatacactctgacatcaggaaaaataatggtccaggacaactttattttgttttgggaaaataatcctgaactcaccatttgattctt |
50748952 |
T |
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