View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14540_low_4 (Length: 325)
Name: NF14540_low_4
Description: NF14540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14540_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 981837 - 981540
Alignment:
| Q |
18 |
gaaagattattgtccgatagatgttgaagaatggtctcaaatgcccaagtcaataaaagacaatttatgagcacttattaaggtaacttctataattttg |
117 |
Q |
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| T |
981837 |
gaaagattattgtccgatagatgttgaagaatggtctcaaatgcccaggtcaataaaagacaacttatgggcacttattaaggtaacttctataattttg |
981738 |
T |
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| Q |
118 |
tgccgtgtagatagtagaatccttcatgcatcagtttttctctaggctgctatcatttggttcatttgttttccaagccattcaatatgaaatcaatttg |
217 |
Q |
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| T |
981737 |
tgccgtgtatatagtagaatccttcatgcatcagttttcctctaggctgctatcatttggttcatttgttttccaagccatttaatatgaaatcaatttg |
981638 |
T |
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| Q |
218 |
tgtctcgcaaatgataagttatttctgattatttattgctcattcggtgcatcttttgtcatgcttccagttcaatcaacattgcattttctattgtt |
315 |
Q |
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||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
981637 |
tgtctcgcaaatgatgagttatttctgattgtttattgttcattcggtgtatcttttgtcatgcttccagttcaatcagcattgcattttctattgtt |
981540 |
T |
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