View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14541_high_11 (Length: 387)
Name: NF14541_high_11
Description: NF14541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14541_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 9 - 375
Target Start/End: Original strand, 8929567 - 8929932
Alignment:
| Q |
9 |
aaatagctatagtatagtttgaccaaaaattattctacccaataacaccacttattgttaaattaagatacgccacaaacttgtatattaatttgaattg |
108 |
Q |
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| T |
8929567 |
aaataactatagtatagtttgaccaaaaattgttctacctaataacaccactaattgttaaat-aagatacgccacaaacttgtatattaatttgaattg |
8929665 |
T |
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| Q |
109 |
aattattcatcaaaggtttagttatttattcacaatatctcaactattctctctccattacatattattttgatcaagtgctagtatcttgtctttttct |
208 |
Q |
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| T |
8929666 |
aattattcatgaaaggtttagttatttattcacaatatctcaactattctctctccattacatattattttgatcaagtgctggtatcttgtctttttct |
8929765 |
T |
|
| Q |
209 |
ttnnnnnnntagaaattcaatttcatgctcggcaataatcaatgtctctccaatctatcatatcagtttactttctaaagaaggagatatccatttgatt |
308 |
Q |
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| T |
8929766 |
ttaaaaaaatagaaattcaatttcatgctcggcaataatcaatgtctctccaatctatcatatcagtttactttctaaagaaggagatatccatttgatt |
8929865 |
T |
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| Q |
309 |
gctacttgctttctaaattctaagtttctaatttgaggaatcaaaagacacctaataatgacatatt |
375 |
Q |
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| T |
8929866 |
gctacttgctttctaaattctaagtttctaatttgaggaatcaaaagacacctaataatgacatatt |
8929932 |
T |
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