View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14541_high_14 (Length: 343)

Name: NF14541_high_14
Description: NF14541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14541_high_14
NF14541_high_14
[»] chr5 (18 HSPs)
chr5 (20-331)||(6269121-6269434)
chr5 (20-147)||(24835148-24835276)
chr5 (20-150)||(14343878-14344009)
chr5 (20-147)||(7314374-7314502)
chr5 (20-147)||(11723920-11724048)
chr5 (20-147)||(11766145-11766273)
chr5 (20-147)||(30607825-30607953)
chr5 (20-147)||(33433996-33434124)
chr5 (20-148)||(9403708-9403837)
chr5 (27-147)||(34455583-34455704)
chr5 (19-143)||(34870313-34870437)
chr5 (24-135)||(30422192-30422302)
chr5 (147-219)||(1975311-1975383)
chr5 (160-218)||(1974154-1974212)
chr5 (147-217)||(40008711-40008781)
chr5 (161-218)||(3458012-3458069)
chr5 (56-109)||(42748256-42748309)
chr5 (147-216)||(1145141-1145210)
[»] chr4 (20 HSPs)
chr4 (20-147)||(44432670-44432798)
chr4 (20-147)||(42533590-42533718)
chr4 (20-147)||(5274280-5274408)
chr4 (20-147)||(46692783-46692910)
chr4 (20-147)||(22047136-22047264)
chr4 (20-147)||(4839781-4839909)
chr4 (20-147)||(55326163-55326291)
chr4 (19-147)||(19248427-19248555)
chr4 (27-147)||(6639357-6639478)
chr4 (22-147)||(26069070-26069195)
chr4 (31-147)||(8894226-8894342)
chr4 (32-149)||(35417446-35417563)
chr4 (32-147)||(40996292-40996408)
chr4 (155-216)||(28796620-28796681)
chr4 (147-216)||(40450931-40451000)
chr4 (147-216)||(55523725-55523794)
chr4 (160-216)||(28798167-28798223)
chr4 (27-102)||(30219082-30219156)
chr4 (171-216)||(636617-636662)
chr4 (161-198)||(42099549-42099586)
[»] chr8 (17 HSPs)
chr8 (20-147)||(3298191-3298319)
chr8 (20-147)||(27347436-27347564)
chr8 (20-148)||(22179898-22180027)
chr8 (20-147)||(27353516-27353644)
chr8 (20-147)||(28926788-28926916)
chr8 (20-147)||(8744012-8744140)
chr8 (20-147)||(9068811-9068939)
chr8 (20-145)||(1606594-1606719)
chr8 (20-147)||(36737505-36737632)
chr8 (73-147)||(16957897-16957972)
chr8 (32-147)||(24040002-24040117)
chr8 (68-147)||(4435540-4435620)
chr8 (68-148)||(21687377-21687459)
chr8 (68-148)||(21691701-21691783)
chr8 (91-147)||(28369585-28369642)
chr8 (171-219)||(4640828-4640876)
chr8 (171-219)||(34276189-34276237)
[»] chr2 (15 HSPs)
chr2 (20-147)||(29223103-29223231)
chr2 (20-147)||(29336402-29336530)
chr2 (28-147)||(8684092-8684213)
chr2 (19-147)||(36668483-36668611)
chr2 (20-104)||(32522419-32522503)
chr2 (83-147)||(29226729-29226794)
chr2 (83-147)||(29340028-29340093)
chr2 (147-216)||(22496085-22496154)
chr2 (68-147)||(31757714-31757795)
chr2 (83-135)||(29792584-29792636)
chr2 (160-217)||(18394992-18395049)
chr2 (68-147)||(27256909-27256989)
chr2 (150-225)||(2154253-2154328)
chr2 (147-218)||(11573631-11573702)
chr2 (82-145)||(40199500-40199564)
[»] chr3 (18 HSPs)
chr3 (20-150)||(52308637-52308768)
chr3 (20-147)||(10407594-10407722)
chr3 (20-147)||(3587789-3587917)
chr3 (20-147)||(27031431-27031559)
chr3 (20-147)||(52045527-52045655)
chr3 (20-147)||(4755502-4755630)
chr3 (32-147)||(7653876-7653992)
chr3 (20-147)||(8614914-8615041)
chr3 (20-147)||(36470073-36470201)
chr3 (39-145)||(11263597-11263705)
chr3 (21-147)||(33247298-33247424)
chr3 (147-216)||(42381615-42381684)
chr3 (147-217)||(53827670-53827740)
chr3 (147-216)||(15042015-15042084)
chr3 (147-216)||(19866733-19866802)
chr3 (155-217)||(42994912-42994974)
chr3 (147-216)||(7666971-7667040)
chr3 (68-147)||(45527010-45527090)
[»] chr1 (14 HSPs)
chr1 (20-149)||(16833394-16833524)
chr1 (20-147)||(38122681-38122809)
chr1 (20-147)||(12168820-12168948)
chr1 (20-147)||(13218679-13218807)
chr1 (32-147)||(33492851-33492967)
chr1 (31-150)||(39453343-39453462)
chr1 (32-147)||(16129000-16129115)
chr1 (20-149)||(13829592-13829721)
chr1 (31-148)||(25242405-25242523)
chr1 (147-216)||(33403135-33403204)
chr1 (147-220)||(3792556-3792629)
chr1 (31-109)||(7062712-7062789)
chr1 (147-216)||(50069243-50069312)
chr1 (68-147)||(432869-432949)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-147)||(117275-117403)
[»] chr7 (20 HSPs)
chr7 (20-149)||(31158920-31159050)
chr7 (20-147)||(22817828-22817956)
chr7 (20-147)||(7143047-7143175)
chr7 (20-147)||(10346950-10347078)
chr7 (28-147)||(22322536-22322656)
chr7 (20-147)||(23794483-23794611)
chr7 (32-147)||(2630810-2630926)
chr7 (20-147)||(12183255-12183383)
chr7 (27-147)||(19472911-19473032)
chr7 (20-147)||(45501275-45501404)
chr7 (20-147)||(2477070-2477198)
chr7 (28-147)||(2798193-2798313)
chr7 (20-147)||(31878011-31878139)
chr7 (68-147)||(31001380-31001460)
chr7 (68-148)||(31665267-31665348)
chr7 (63-135)||(8139848-8139920)
chr7 (68-147)||(24169408-24169488)
chr7 (83-147)||(20403075-20403140)
chr7 (147-219)||(1537255-1537327)
chr7 (160-216)||(31823589-31823645)
[»] chr6 (15 HSPs)
chr6 (20-148)||(26511145-26511274)
chr6 (20-148)||(26516261-26516390)
chr6 (20-147)||(9934629-9934757)
chr6 (20-148)||(3538436-3538565)
chr6 (20-147)||(34005894-34006022)
chr6 (20-147)||(24161869-24161996)
chr6 (31-147)||(31131276-31131392)
chr6 (20-127)||(26603636-26603742)
chr6 (20-147)||(15641714-15641841)
chr6 (56-127)||(2298307-2298378)
chr6 (68-149)||(5671728-5671810)
chr6 (147-216)||(14830392-14830461)
chr6 (56-109)||(18751341-18751394)
chr6 (147-219)||(35060904-35060976)
chr6 (68-148)||(24878405-24878486)
[»] scaffold0015 (2 HSPs)
scaffold0015 (20-147)||(174034-174162)
scaffold0015 (20-147)||(185192-185320)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-148)||(354384-354513)
[»] scaffold1494 (1 HSPs)
scaffold1494 (20-147)||(955-1082)
[»] scaffold0014 (1 HSPs)
scaffold0014 (58-147)||(79922-80012)
[»] scaffold0059 (1 HSPs)
scaffold0059 (30-147)||(17127-17245)
[»] scaffold0744 (1 HSPs)
scaffold0744 (19-147)||(1847-1975)
[»] scaffold0458 (1 HSPs)
scaffold0458 (31-150)||(10212-10331)
[»] scaffold0871 (1 HSPs)
scaffold0871 (68-147)||(4327-4407)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 20 - 331
Target Start/End: Complemental strand, 6269434 - 6269121
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaa-tacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacac 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269434 aatcagacatgtaaagcataaatggtaaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacac 6269335  T
Q  119 atgaaatatgttacttt-gagcacttatcacatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 217  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||||||    
T  6269334 atgaaatatgttacttttgagcacttatcacatgcgcagggacattttggacatttacattgaaaatgagcgatactgtttggataatgagcagaattca 6269235  T
Q  218 aagttcaagacatgtaaacccgttttgggattttgctcttttaacttcaaaaattgttatatttaacactccgaaaatagcaaaatacctgcagcagtaa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269234 aagttcaagacatgtaaacccgttttgggattttgctcttttaacttcaaaaattgttatatttaacactccgaaaatagcaaaatacctgcagcagtaa 6269135  T
Q  318 ataatcgccctttg 331  Q
     |||||||||||||    
T  6269134 ttaatcgccctttg 6269121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 24835276 - 24835148
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  24835276 aatcaggcatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 24835177  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  24835176 tgaaatatgttacttttgagcacttatca 24835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 14344009 - 14343878
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  14344009 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 14343910  T
Q  120 tgaaatatgttac-tttgagcacttatcacat 150  Q
    ||||||||||||| ||||||||||||||||||    
T  14343909 tgaaatatgttacttttgagcacttatcacat 14343878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 7314502 - 7314374
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  7314502 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 7314403  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  7314402 tgaaatatgttacttttgagcacttatca 7314374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 11723920 - 11724048
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  11723920 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 11724019  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  11724020 tgaaatatgttacttttgagcacttatca 11724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 11766273 - 11766145
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  11766273 aatcagacatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacgagtcactaatttgcctaagttaacaca 11766174  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  11766173 tgaaatatgttacttttgagcacttatca 11766145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 30607825 - 30607953
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  30607825 aatcaggcatgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 30607924  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  30607925 tgaaatatgttacttttgagcacttatca 30607953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 33434124 - 33433996
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  33434124 aatcaggcatgtaaagcataaatggtaaaaatacactcaaatggtaacttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 33434025  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| ||| |||||||||||    
T  33434024 tgaaatatgttacttttaagcacttatca 33433996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 9403837 - 9403708
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  9403837 aatcaggcatgtaaagcataaatagtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 9403738  T
Q  120 tgaaatatgttac-tttgagcacttatcac 148  Q
    ||||||||||||| ||||||||||||||||    
T  9403737 tgaaatatgttacttttgagcacttatcac 9403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 34455704 - 34455583
Alignment:
Q  27 catgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaata 126  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  34455704 catgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaata 34455605  T
Q  127 tgttac-tttgagcacttatca 147  Q
    |||||| |||||||||||||||    
T  34455604 tgttacttttgagcacttatca 34455583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 34870313 - 34870437
Alignment:
Q  19 aaatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacac 118  Q
    ||||||||||||||||||||||||||||||||| ||  ||| || ||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  34870313 aaatcagacatgtaaagcataaatggtaaaaatgcaa-caattgatagtttttccttagataacttgcaaaacaagccactaaaatgcctagattaacac 34870411  T
Q  119 atgaaatatgttac-tttgagcactt 143  Q
    || ||||||||||| |||||||||||    
T  34870412 ataaaatatgttacttttgagcactt 34870437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 30422302 - 30422192
Alignment:
Q  24 agacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaa 123  Q
    ||||||||||||||||||||| |||| |||  | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  30422302 agacatgtaaagcataaatggcaaaattacgat-aaatggtagtttttccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaa 30422204  T
Q  124 atatgttacttt 135  Q
    |||| |||||||    
T  30422203 atatattacttt 30422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 1975311 - 1975383
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaa 219  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||  ||||| | ||||||||| ||||||||    
T  1975311 acatgcgcatgggcattttggacatttactttggaaatgagcaatgctgtttagataatgagcagaattcaaa 1975383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 1974212 - 1974154
Alignment:
Q  160 cattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaa 218  Q
    |||||||||||||||| |||| ||||||||||| | | | |||||||||||||||||||    
T  1974212 cattttggacatttactttgggaatgagcgatactatctgggtaatgagcataattcaa 1974154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 40008781 - 40008711
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 217  Q
    ||||||| | || |||||| ||||||||| |||  ||||||||||||||||| ||||||||||| ||||||    
T  40008781 acatgcgcaggggcattttagacatttactttgagaatgagcgataatgtttaggtaatgagcagaattca 40008711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 3458069 - 3458012
Alignment:
Q  161 attttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaa 218  Q
    ||||||||||||||| |||||||||||| |||  |||| ||||||||||| |||||||    
T  3458069 attttggacatttactttggaaatgagcaatacggtttcggtaatgagcagaattcaa 3458012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 42748256 - 42748309
Alignment:
Q  56 tcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgccta 109  Q
    |||||| |||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  42748256 tcaaattgtagcttttccttaaataacttgcaaaacaagtaactaaagtgccta 42748309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 1145210 - 1145141
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    |||||||||  | |||||||| ||||||| |||| ||||||||| | ||||| | |||||||||||||||    
T  1145210 acatgcgtagaggcattttggtcatttactttgggaatgagcgaaactgtttggataatgagcataattc 1145141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 9e-55; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 44432670 - 44432798
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  44432670 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 44432769  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  44432770 tgaaatatgttacttttgagcacttatca 44432798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 42533590 - 42533718
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  42533590 aatcaggcatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttagcaca 42533689  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  42533690 tgaaatatgttacttttgagcacttatca 42533718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 5274280 - 5274408
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  5274280 aatcaggcatgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 5274379  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  5274380 tgaaatatgttacttttgagcacttatca 5274408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 46692783 - 46692910
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  46692783 aatcaggcatgtaaagcataaatggtataaatacactcaaatgatagcttttccttagataacttgcaaaacaagtcactaaaatgcctagattaacaca 46692882  T
Q  120 tgaaatatgttactttgagcacttatca 147  Q
    | |||||| |||||||||||||||||||    
T  46692883 taaaatatattactttgagcacttatca 46692910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 22047264 - 22047136
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  22047264 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaaatcactaatttgcctaagttaacaca 22047165  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  22047164 tgaaatatgttacttttgagcacttatca 22047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 4839781 - 4839909
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||| ||||||| | ||||| |||||||||    
T  4839781 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttcctcagataacttgcaaaacaaatcactaattcgcctaagttaacaca 4839880  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  4839881 tgaaatatgttacttttgagcacttatca 4839909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 55326291 - 55326163
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||||| |||| |||    
T  55326291 aatcaggcatgtaaagcgtaaatggtacaaatacactcaaatggtagtttttccttagataacttgcagaacaagtcactaaacttcctagattaataca 55326192  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    | ||||||||||| |||||||||||||||    
T  55326191 taaaatatgttacttttgagcacttatca 55326163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 19248427 - 19248555
Alignment:
Q  19 aaatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacac 118  Q
    ||||||| ||||||||||||||||||||||||| ||  ||| || ||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  19248427 aaatcaggcatgtaaagcataaatggtaaaaatgcaa-caattgatagattttccttagataacttgcaaaacaagccactaaagtgcctagattaacac 19248525  T
Q  119 atgaaatatgttac-tttgagcacttatca 147  Q
    || |||| |||| | |||||||||||||||    
T  19248526 ataaaatgtgttgcttttgagcacttatca 19248555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 6639478 - 6639357
Alignment:
Q  27 catgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaata 126  Q
    ||||||||||||||||||||||| ||||   |  |||||| ||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||    
T  6639478 catgtaaagcataaatggtaaaattacaacaagttggtagcttttccttagataacttgcaaaacaagtcaccaaaatgcctaaattaacacatgaaata 6639379  T
Q  127 tgttact-ttgagcacttatca 147  Q
    | ||||| ||||||||||||||    
T  6639378 tattactcttgagcacttatca 6639357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 26069195 - 26069070
Alignment:
Q  22 tcagacatgtaaagcataaatggtaaaaatacactcaaat-ggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacat 120  Q
    |||| |||||||||||||||||||||||  ||||  || | ||||| |||| ||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  26069195 tcaggcatgtaaagcataaatggtaaaataacac--aattaggtagctttttcttagataacttgcagaacaagtcactaaaatgcctagattaacacat 26069098  T
Q  121 gaaatatgttac-tttgagcacttatca 147  Q
     ||||||||||| |||||||||||||||    
T  26069097 aaaatatgttacttttgagcacttatca 26069070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 8894342 - 8894226
Alignment:
Q  31 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 130  Q
    |||||||||||||| | || |||| |||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||| |     
T  8894342 taaagcataaatggcataattaca-tcaaattgtagctttaccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaaatatatc 8894244  T
Q  131 a-ctttgagcacttatca 147  Q
    |  |||||||||||||||    
T  8894243 agttttgagcacttatca 8894226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 35417446 - 35417563
Alignment:
Q  32 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 131  Q
    |||||||||||||| ||| ||||  |||||| | | |||||||||||||| |||||||||||||||||||| |||||   ||||||||||||| ||  ||    
T  35417446 aaagcataaatggtcaaattacaa-caaatgattgcttttccttagataatttgcaaaacaagtcactaaaatgccttatttaacacatgaaagatagta 35417544  T
Q  132 c-tttgagcacttatcaca 149  Q
    | |||||||||||||||||    
T  35417545 cttttgagcacttatcaca 35417563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 40996292 - 40996408
Alignment:
Q  32 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttg-caaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 130  Q
    |||||||||||||| ||| |||| | ||||| | | |||||||||||||||||| ||||||||||||||||| | ||||  ||||||||||||| ||  |    
T  40996292 aaagcataaatggtcaaattacaat-aaatgattgcttttccttagataacttgacaaaacaagtcactaaaatacctattttaacacatgaaagataat 40996390  T
Q  131 ac-tttgagcacttatca 147  Q
    || |||||||||||||||    
T  40996391 acttttgagcacttatca 40996408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 28796681 - 28796620
Alignment:
Q  155 atggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||||||||||||||| |||  ||||||||||| ||||| ||||||||||| |||||    
T  28796681 atggacattttggacatttactttgagaatgagcgatattgtttgggtaatgagcagaattc 28796620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 40451000 - 40450931
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  40451000 acatgcgtaggggcattttcgacttttactttgggaatgagcgatactgtttaggtaatgagcagaattc 40450931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 55523794 - 55523725
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||| ||| ||||| ||| |||||||||||||||||| | ||||||||| |||||    
T  55523794 acatgcgtaggggcattttcgacttttactttgaaaatgagcgataatgtttggataatgagcagaattc 55523725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 28798167 - 28798223
Alignment:
Q  160 cattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    |||||||||||||||| |||  ||||||||||| ||||| ||||||||||| |||||    
T  28798167 cattttggacatttactttgagaatgagcgatactgtttgggtaatgagcagaattc 28798223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 30219082 - 30219156
Alignment:
Q  27 catgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaa 102  Q
    |||||||||||||||| || ||| ||||  ||| || | | |||||||||||||||||||| ||||||||||||||    
T  30219082 catgtaaagcataaattgtgaaattacaa-caattgattgtttttccttagataacttgcagaacaagtcactaaa 30219156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 636617 - 636662
Alignment:
Q  171 tttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||| |||||||| ||||||| ||||| |||||||||||||||||    
T  636617 tttactttggaaataagcgatactgtttgggtaatgagcataattc 636662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 42099549 - 42099586
Alignment:
Q  161 attttggacatttacattggaaatgagcgataatgttt 198  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  42099549 attttggacatttactttggaaatgagcgatattgttt 42099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 3298319 - 3298191
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  3298319 aatcagacatgtaaagcataaatggtaaaaataaactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 3298220  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  3298219 tgaaatatgttacttttgagcacttatca 3298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 27347564 - 27347436
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27347564 aatcaggcatgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 27347465  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  27347464 tgaaatatgttacttttgagcacttatca 27347436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 22180027 - 22179898
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||    
T  22180027 aatcaggcatgtaaagcataaatggtaaaattacactcaaatggtagattttccttagataacttgcgaaacaagtcactaatttgcctaagttaacgca 22179928  T
Q  120 tgaaatatgttac-tttgagcacttatcac 148  Q
    | ||||||||||| ||||||||||||||||    
T  22179927 taaaatatgttacttttgagcacttatcac 22179898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 27353644 - 27353516
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27353644 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatgatagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 27353545  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  27353544 tgaaatatgttacttttgagcacttatca 27353516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 28926788 - 28926916
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  28926788 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaaaaagtcactaatttgcctaagttaacaca 28926887  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  28926888 tgaaatatgttacttttgagcacttatca 28926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 8744012 - 8744140
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||  ||| | |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  8744012 aatcaggcatgtaaagcataaataataatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcaataatttgcctaagttaacaca 8744111  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  8744112 tgaaatatgttacttttgagcacttatca 8744140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 9068811 - 9068939
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||  | |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  9068811 aatcaggcatgtaaagcataaatggtaaagttgcactcaaatggtagcttttccttggataacttgcaaaacaagtcactaatttgcctaagttaacaca 9068910  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||| ||||||||||    
T  9068911 tgaaatatgttacttttgggcacttatca 9068939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 1606719 - 1606594
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    ||||||||||||||| |||||||||||||| ||||  ||| ||  || |||| ||||||||||||||| |||||||||||||| ||||||  ||||||||    
T  1606719 aatcagacatgtaaaacataaatggtaaaagtacaa-caattgaaagctttttcttagataacttgcagaacaagtcactaaaatgcctaaattaacaca 1606621  T
Q  120 tgaaatatgttac-tttgagcacttat 145  Q
    |||||||| |||| |||||||||||||    
T  1606620 tgaaatatattacttttgagcacttat 1606594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 36737505 - 36737632
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||| | |||||  ||| || |||  ||||||||||||||||||| |||||||||| ||| ||||||| ||||||||    
T  36737505 aatcaggcatgtaaagcataaatggtatagatacaa-caattgatagcctttccttagataacttgcagaacaagtcaccaaaatgcctagattaacaca 36737603  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    | ||||||| ||| ||| |||||||||||    
T  36737604 taaaatatggtactttttagcacttatca 36737632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 16957972 - 16957897
Alignment:
Q  73 cttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| ||| ||||||||||| |||||||||||||||    
T  16957972 cttagataacttgcaaaacaagtcactaatatgcctagattaacgcataaaatatgttacttttgagcacttatca 16957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 24040117 - 24040002
Alignment:
Q  32 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 131  Q
    |||||||||||||| ||| ||||  |||||| | | ||||||||| ||||||| ||||||||||||||||| ||||||  ||||||||||||| ||  ||    
T  24040117 aaagcataaatggtcaaattacaa-caaatgattgcttttccttatataacttacaaaacaagtcactaaaatgcctattttaacacatgaaagataata 24040019  T
Q  132 c-tttgagcacttatca 147  Q
    | |||||||||||||||    
T  24040018 cttttgagcacttatca 24040002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 4435540 - 4435620
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||| ||||||||||||||||||| |||||||| ||||||  |||||||| ||||||| | || |||||||||||||||    
T  4435540 ttttccatagataacttgcaaaacaaatcactaaagtgcctaaattaacacaagaaatatatcacttttgagcacttatca 4435620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 21687459 - 21687377
Alignment:
Q  68 ttttccttagataa-cttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 148  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||| | || ||||||||||||||||    
T  21687459 ttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatcac 21687377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 21691783 - 21691701
Alignment:
Q  68 ttttccttagataa-cttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 148  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||| | || ||||||||||||||||    
T  21691783 ttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatcac 21691701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 28369642 - 28369585
Alignment:
Q  91 caagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||| || |||| |||||||||||||||||||||| |||||||||||||||    
T  28369642 caagtcactaatttacctaagttaacacatgaaatatgttacttttgagcacttatca 28369585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 4640828 - 4640876
Alignment:
Q  171 tttacattggaaatgagcgataatgttttggtaatgagcataattcaaa 219  Q
    ||||| ||||||||||||||||  |||| ||||||||||| ||||||||    
T  4640828 tttactttggaaatgagcgatacagtttgggtaatgagcagaattcaaa 4640876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 34276237 - 34276189
Alignment:
Q  171 tttacattggaaatgagcgataatgttttggtaatgagcataattcaaa 219  Q
    ||||| |||||||| ||||||| ||||| ||||||||||| ||||||||    
T  34276237 tttactttggaaataagcgatattgtttgggtaatgagcagaattcaaa 34276189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 29223231 - 29223103
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  29223231 aatcaggcatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 29223132  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  29223131 tgaaatatgttacttttgagcacttatca 29223103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 29336530 - 29336402
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  29336530 aatcaggcatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 29336431  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  29336430 tgaaatatgttacttttgagcacttatca 29336402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 8684092 - 8684213
Alignment:
Q  28 atgtaaagcataaatggtaaaa-atacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaata 126  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  8684092 atgtaaagcataaatggtaaaaaatacactcaaacggtagcttttccttagataacttgcaaaacaagtcactaattttcctaagttaacacatgaaata 8684191  T
Q  127 tgttac-tttgagcacttatca 147  Q
    | |||| |||||||||||||||    
T  8684192 ttttacttttgagcacttatca 8684213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 36668483 - 36668611
Alignment:
Q  19 aaatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacac 118  Q
    ||||||| ||||||||||||||||||||||||| ||  ||| || ||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  36668483 aaatcaggcatgtaaagcataaatggtaaaaatgcaa-caattgatagcttttccttagataacttgcaaaacaagccactaaaatgcctagattaacac 36668581  T
Q  119 atgaaatatgttac-tttgagcacttatca 147  Q
    || ||||||||| | |||||||||||||||    
T  36668582 ataaaatatgttgcttttgagcacttatca 36668611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 32522503 - 32522419
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaatt 104  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  32522503 aatcaggcatgtaaagcataaatggtataaatacactcaaatgatagcttttccttagataacttgcaaaacaagtcactaaatt 32522419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 29226794 - 29226729
Alignment:
Q  83 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  29226794 ttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatca 29226729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 29340093 - 29340028
Alignment:
Q  83 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  29340093 ttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatca 29340028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 22496085 - 22496154
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||| ||||||||| ||| |||||||||||| | ||| |||||||||||||||||    
T  22496085 acatgcgtaagggcattttagacatttactttgaaaatgagcgatactatttaggtaatgagcataattc 22496154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 31757795 - 31757714
Alignment:
Q  68 ttttccttagataa-cttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||| | || |||||||||||||||    
T  31757795 ttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatca 31757714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 29792636 - 29792584
Alignment:
Q  83 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttacttt 135  Q
    ||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  29792636 ttgcagaacaagtcactaaaatgcctagattaacacataaaatatgttacttt 29792584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 18394992 - 18395049
Alignment:
Q  160 cattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 217  Q
    ||||||||||| |||| |||| ||||||||||| ||||| ||||||||||| ||||||    
T  18394992 cattttggacaattactttgggaatgagcgatattgtttgggtaatgagcagaattca 18395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 27256989 - 27256909
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||| ||||||||||| | |||||||||||||| ||||||  |||||| | ||||||| | || |||||||||||||||    
T  27256989 ttttccatagataacttgtagaacaagtcactaaaatgcctaaattaacataagaaatatatcacttttgagcacttatca 27256909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 2154328 - 2154253
Alignment:
Q  150 tgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaagttcaa 225  Q
    |||||| ||||||||||  | ||||| |||| ||||||||||| ||||| ||||||||||| ||||| || |||||    
T  2154328 tgcgtagggacattttgatcttttactttgggaatgagcgatattgtttgggtaatgagcagaattccaaattcaa 2154253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 11573702 - 11573631
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaa 218  Q
    |||| |||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||||    
T  11573702 acatacgtaggggcatttttgacttttactttgggaatgagcgatattgtttgggtaatgagcagaattcaa 11573631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 40199564 - 40199500
Alignment:
Q  82 cttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttat 145  Q
    ||||||||||||| ||||||| ||||||   ||||||||||||||| | || |||||||||||||    
T  40199564 cttgcaaaacaaggcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttat 40199500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 8e-52; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 52308637 - 52308768
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  52308637 aatcagacatgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaagcaagtcactaatttgcctaagttaacaca 52308736  T
Q  120 tgaaatatgttac-tttgagcacttatcacat 150  Q
    ||||||||||||| ||||||||||||||||||    
T  52308737 tgaaatatgttacttttgagcacttatcacat 52308768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 10407594 - 10407722
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10407594 aatcaggcatgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 10407693  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  10407694 tgaaatatgttacttttgagcacttatca 10407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 3587917 - 3587789
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  3587917 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 3587818  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  3587817 tgaaatatgttacttttgagcacttatca 3587789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 27031431 - 27031559
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27031431 aatcaggcatgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 27031530  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  27031531 tgaaatatgttacttttgagcacttatca 27031559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 52045527 - 52045655
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  52045527 aatcaggcatgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcacaaatttgcctaagttaacaca 52045626  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  52045627 tgaaatatgttacttttgagcacttatca 52045655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 4755502 - 4755630
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  4755502 aatcaggcatgtaaggcataaatggtaaaaatacactcaaatggtaacttttccttagataacttgcaaaacaagtcactaatttgcctaatttaacaca 4755601  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  4755602 tgaaatatgttacttttgagcacttatca 4755630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 7653876 - 7653992
Alignment:
Q  32 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 131  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  7653876 aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta 7653975  T
Q  132 c-tttgagcacttatca 147  Q
    | |||||||||||||||    
T  7653976 cttttgagcacttatca 7653992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 8615041 - 8614914
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  8615041 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgc-aaacaagtcactaatttgcctaagttaacaca 8614943  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  8614942 tgaaatatgttacttttgagcacttatca 8614914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 36470073 - 36470201
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  36470073 aatcaggcatgtaaagcataattggtataaatacactcaaatggtagcttttccttggataacttgcaaaacaaatcactaaattgcctagattaacaca 36470172  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    | ||||||| ||| |||||||||||||||    
T  36470173 ttaaatatggtacttttgagcacttatca 36470201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 11263597 - 11263705
Alignment:
Q  39 aaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac--tttg 136  Q
    |||||||||||||||||||||||| |||  || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||    
T  11263597 aaatggtaaaaatacactcaaatgctagcgttaccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttactttttg 11263696  T
Q  137 agcacttat 145  Q
    |||||||||    
T  11263697 agcacttat 11263705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 33247424 - 33247298
Alignment:
Q  21 atcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacat 120  Q
    ||||| |||||||||||||||||||||||  ||||  |  | |||| |||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  33247424 atcaggcatgtaaagcataaatggtaaaagaacaca-atttagtagcttttccttagataacttgcagaacaagtcactaaaatgcctagattaacacat 33247326  T
Q  121 gaaatatgttac-tttgagcacttatca 147  Q
     ||||||||||| |||||||||||||||    
T  33247325 aaaatatgttacttttgagcacttatca 33247298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 42381684 - 42381615
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||||||||||||| |||||||||||||||  ||||| ||||||||||| |||||    
T  42381684 acatgcgtaagggcattttggacatttactttggaaatgagcgatgttgtttaggtaatgagcagaattc 42381615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 53827670 - 53827740
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 217  Q
    ||||||||| || |||||||||||||||| |||| ||||||||||| | ||| ||||||||||| ||||||    
T  53827670 acatgcgtaggggcattttggacatttactttgggaatgagcgatactatttaggtaatgagcagaattca 53827740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 15042015 - 15042084
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  15042015 acatgcgtaggggcattttcgacttttactttgggaatgagcgatattgtttgggtaatgagcagaattc 15042084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 19866802 - 19866733
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  19866802 acatgcgtaggggcatttttgacttttactttgggaatgagcgatactgtttgggtaatgagcagaattc 19866733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 42994912 - 42994974
Alignment:
Q  155 atggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 217  Q
    |||| |||||| ||||||||| |||| ||||||||||| | ||| ||||||||||| ||||||    
T  42994912 atgggcattttagacatttactttgggaatgagcgatactatttaggtaatgagcagaattca 42994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 7666971 - 7667040
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||| ||| ||||  |||| ||||||||||| ||||| ||||||||||| |||||    
T  7666971 acatgcgtaggggcatttttgacttttattttgggaatgagcgatactgtttgggtaatgagcaaaattc 7667040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 45527090 - 45527010
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||||||||||| ||| | ||||||||||| || ||| ||  |||||| | ||||||| |||| |||||||||||||||    
T  45527090 ttttccttagataatttgtataacaagtcactgaaatgcatattttaacataagaaatatattacttttgagcacttatca 45527010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 16833394 - 16833524
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  16833394 aatcaggcatgtaaagcataaatggtaaaaatacaatcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 16833493  T
Q  120 tgaaatatgttac-tttgagcacttatcaca 149  Q
    ||||||||||||| |||||||||||||||||    
T  16833494 tgaaatatgttacttttgagcacttatcaca 16833524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 38122681 - 38122809
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  38122681 aatcaggcatgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 38122780  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  38122781 tgaaatatgttacttttgagcacttatca 38122809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 12168820 - 12168948
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  12168820 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaaatcactaatttgcctaagttaacaca 12168919  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  12168920 tgaaatatgttacttttgagcacttatca 12168948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 13218679 - 13218807
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  13218679 aatcaggcatgtaaagcataaatggtataaatacactcaaatggtagcttttccttagataactttcaaaacaagtcactaaattacctagattaacaca 13218778  T
Q  120 tgaaatatgtta-ctttgagcacttatca 147  Q
    ||||||||||||  |||||||| ||||||    
T  13218779 tgaaatatgttagttttgagcagttatca 13218807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 33492851 - 33492967
Alignment:
Q  32 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 131  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  33492851 aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta 33492950  T
Q  132 c-tttgagcacttatca 147  Q
    | |||||||||||||||    
T  33492951 cttttgagcacttatca 33492967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 39453462 - 39453343
Alignment:
Q  31 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 130  Q
    |||||||||||||| |||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||| | ||||  ||||||||| | |||| ||    
T  39453462 taaagcataaatggcaaaattacaa-caaatggtagtttttccttagataacttgcaaaacaagtcactaaaatacctaaattaacacataacatatatt 39453364  T
Q  131 ac-tttgagcacttatcacat 150  Q
    || ||||||||||||||||||    
T  39453363 acttttgagcacttatcacat 39453343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 16129115 - 16129000
Alignment:
Q  32 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 131  Q
    |||||||||||||| ||| ||||  |||||| | | |||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||| ||| ||    
T  16129115 aaagcataaatggtcaaattacaa-caaatgattgcttttccttagataacttgcaaaacaagtcattaaaatgcctattttaacacatgaaagatggta 16129017  T
Q  132 c-tttgagcacttatca 147  Q
    | |||||||||||||||    
T  16129016 cttttgagcacttatca 16129000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 13829721 - 13829592
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||| |||| |||||| |||| | || |||||| ||||||| |||||||||| |  |||||| |||||| ||| ||  ||||||||    
T  13829721 aatcaggcatgtaaagcacaaatagtaaaagtacaat-aattggtagcttttcctcagataacttgtaggacaagttactaaaatgcataatttaacaca 13829623  T
Q  120 tgaaatatgtta-ctttgagcacttatcaca 149  Q
    |||||||| ||| ||||||||||||||||||    
T  13829622 tgaaatatattacctttgagcacttatcaca 13829592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 25242523 - 25242405
Alignment:
Q  31 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 130  Q
    |||||||||||||||||||| |  |   ||| |||| |||||||||||||||||||| ||||||||| |||| ||||||  |||||||||  ||||||||    
T  25242523 taaagcataaatggtaaaaaaatgcaacaatagtagcttttccttagataacttgcagaacaagtcattaaaatgcctaaattaacacatagaatatgtt 25242424  T
Q  131 a-ctttgagcacttatcac 148  Q
    |  ||||||||||||||||    
T  25242423 agttttgagcacttatcac 25242405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 33403135 - 33403204
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| || |||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  33403135 acatgcgtaggggcattttcgacttttactttggaaatgagcgatactgtttgggtaatgagcataattc 33403204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 3792629 - 3792556
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaag 220  Q
    ||||||||| || |||||||||| ||||| |||||||||||||| | | ||| ||||||||||| |||||||||    
T  3792629 acatgcgtaagggcattttggacttttactttggaaatgagcgaaactatttgggtaatgagcagaattcaaag 3792556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 7062789 - 7062712
Alignment:
Q  31 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgccta 109  Q
    ||||||||||||||||   || || |||||| |||| ||||| |||||||||||||||||||||| |||||| ||||||    
T  7062789 taaagcataaatggtatttattca-tcaaattgtagtttttctttagataacttgcaaaacaagtaactaaagtgccta 7062712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 50069243 - 50069312
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||| | || |||||||||||||||| |||| ||||||||||  ||||| ||||||||||| |||||    
T  50069243 acatgcgcaggggcattttggacatttactttgggaatgagcgatgctgtttgggtaatgagcagaattc 50069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 432869 - 432949
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||| ||||||||||| | |||||||||||||| ||||||  |||||| | ||||||| | || |||||||||||||||    
T  432869 ttttccatagataacttgtagaacaagtcactaaaatgcctaaattaacataagaaatatatcacttttgagcacttatca 432949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 117275 - 117403
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  117275 aatcagacatgtaaagcataaatggtataaacacactcaaatggtagcttttccttagataactttcaaaacaagtcactaaattgcctagattaacaca 117374  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  117375 tgaaatatgttacttttgagcacttatca 117403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 8e-49; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 31158920 - 31159050
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  31158920 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 31159019  T
Q  120 tgaaatatgttac-tttgagcacttatcaca 149  Q
    ||||||||||||| |||||||||||||||||    
T  31159020 tgaaatatgttacttttgagcacttatcaca 31159050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 22817956 - 22817828
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||     
T  22817956 aatcaggcatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactattttgcctaagttaacacc 22817857  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  22817856 tgaaatatgttacttttgagcacttatca 22817828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 7143175 - 7143047
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  7143175 aatcaggcatgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaattttcctaagttaacaca 7143076  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  7143075 tgaaatatgttacttttgagcacttatca 7143047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 10346950 - 10347078
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10346950 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 10347049  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||| ||||||| |||||||||||||||    
T  10347050 tgaaaaatgttacttttgagcacttatca 10347078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 22322536 - 22322656
Alignment:
Q  28 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 127  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  22322536 atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcgctaatttgcctaagttaacacatgaaatat 22322635  T
Q  128 gttac-tttgagcacttatca 147  Q
    ||||| |||||||||||||||    
T  22322636 gttacttttgagcacttatca 22322656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 23794611 - 23794483
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  23794611 aatcaggcatgtaaagaataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 23794512  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  23794511 tgaaatatgttacttttgagcacttatca 23794483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 2630926 - 2630810
Alignment:
Q  32 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 131  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  2630926 aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta 2630827  T
Q  132 c-tttgagcacttatca 147  Q
    | |||||||||||||||    
T  2630826 cttttgagcacttatca 2630810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 12183383 - 12183255
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || | || |||||||||    
T  12183383 aatcaggcatgtgaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaggtcactaatttacataagttaacaca 12183284  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  12183283 tgaaatatgttacttttgagcacttatca 12183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 19472911 - 19473032
Alignment:
Q  27 catgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaata 126  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||    
T  19472911 catgtaaagcataaatggtaaaaatacactcaaaaggtagcttttccttagataacttgcaaaataagtcactaatttgcctaaattaacacatgaaata 19473010  T
Q  127 tgttac-tttgagcacttatca 147  Q
    |||||| ||| |||||||||||    
T  19473011 tgttacttttaagcacttatca 19473032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 45501275 - 45501404
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaac-aagtcactaaattgcctaggttaacac 118  Q
    |||||| |||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||| || |||||| ||||||||||||||||||| ||| |||    
T  45501275 aatcaggcatgtaaaacataaatggtataaatacactcaaatgatagcttttccttagataaatttcaaaactaagtcactaaattgcctagattagcac 45501374  T
Q  119 atgaaatatgttac-tttgagcacttatca 147  Q
    |||||||||||||| |||||||||||||||    
T  45501375 atgaaatatgttacttttgagcacttatca 45501404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 2477198 - 2477070
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||| |||||||||||||||||||||||| | |||| |||| ||||||||| |||||||||||||||||||| ||||||||||||| ||    
T  2477198 aatcaggcatgtaaaacataaatggtaaaaatacactcaattagtagctttttcttagataagttgcaaaacaagtcactaaaatgcctaggttaacgca 2477099  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    | ||||||||||| ||||| |||||||||    
T  2477098 taaaatatgttacttttgatcacttatca 2477070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 2798193 - 2798313
Alignment:
Q  28 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 127  Q
    ||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  2798193 atgtaaagcataaatggtataaatacactcaaatgattgtttttccttagataacttgcagaacaagtcactaaattgcctagattaacacataaaatat 2798292  T
Q  128 gtta-ctttgagcacttatca 147  Q
    ||||  ||||| |||||||||    
T  2798293 gttatttttgaacacttatca 2798313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 31878139 - 31878011
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||  | ||||||||||||| ||||  ||||||||    
T  31878139 aatcaggcatgtaaagcataaatggtataaatacactcaaatgatagcttttccctagataacttgcaggataagtcactaaattacctatattaacaca 31878040  T
Q  120 tgaaatatgtt-actttgagcacttatca 147  Q
    | |||||| || ||||| |||||||||||    
T  31878039 taaaatatattaactttaagcacttatca 31878011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 31001380 - 31001460
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||| ||||||||||||| | |||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||||    
T  31001380 tttttcttagataacttggagaacaagtcactaaaatgcctagattaacacataaaatatgttacttttgagcacttatca 31001460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 31665267 - 31665348
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 148  Q
    |||||||||||||||||||| |||||||||||  | ||| ||  |||||||||||||||| |||| ||||||||||||||||    
T  31665267 ttttccttagataacttgcataacaagtcactgtaatgcatattttaacacatgaaatatattacttttgagcacttatcac 31665348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 8139848 - 8139920
Alignment:
Q  63 gtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttacttt 135  Q
    |||| ||||||||||||||| ||||||| ||||||||||| ||||||   ||||||||||||||| |||||||    
T  8139848 gtagcttttccttagataacctgcaaaataagtcactaaagtgcctaaaataacacatgaaatatattacttt 8139920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 24169408 - 24169488
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||||||  ||||||||||||||| |||||||| ||||||   ||| ||||||||||| | || |||||||||||||||    
T  24169408 ttttccttaagtaacttgcaaaacaaatcactaaagtgcctaaaataatacatgaaatatatcacttttgagcacttatca 24169488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 20403140 - 20403075
Alignment:
Q  83 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||| |||||||| ||||||  |||||||| ||||||| | || |||||||||||||||    
T  20403140 ttgcaaaacaaatcactaaagtgcctaaattaacacaagaaatatatcacttttgagcacttatca 20403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 1537255 - 1537327
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaa 219  Q
    ||||||| | || ||||||| |||||||| |||  ||||| ||||| ||||| ||||||||||| ||||||||    
T  1537255 acatgcgcaggggcattttgaacatttactttgagaatgaacgatactgtttgggtaatgagcagaattcaaa 1537327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 31823645 - 31823589
Alignment:
Q  160 cattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||||||| |||||  |||| ||||||||||| ||||| ||||||||||| |||||    
T  31823645 cattttggatatttattttgggaatgagcgatattgtttgggtaatgagcagaattc 31823589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 26511145 - 26511274
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  26511145 aatcaggcatgtaaagcataaatggtaaaattatactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 26511244  T
Q  120 tgaaatatgttac-tttgagcacttatcac 148  Q
    ||||||||||||| ||||||||||||||||    
T  26511245 tgaaatatgttacttttgagcacttatcac 26511274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 26516261 - 26516390
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  26516261 aatcaggcatgtaaagcataaatggtaaaattatactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 26516360  T
Q  120 tgaaatatgttac-tttgagcacttatcac 148  Q
    ||||||||||||| ||||||||||||||||    
T  26516361 tgaaatatgttacttttgagcacttatcac 26516390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 9934629 - 9934757
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  9934629 aatcaggcatgtaaagcataaatggtaaaaatacactcaaatggtagtttttccttagataacttgcaaaacaagtcactaatttacctaagttaacaca 9934728  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| ||| |||||||||||    
T  9934729 tgaaatatgttacttttaagcacttatca 9934757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 3538565 - 3538436
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  3538565 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacgagtcactaatttgcctaagttaacaca 3538466  T
Q  120 tgaaatatgttac-tttgagcacttatcac 148  Q
    ||||||||||||| ||||||||||||||||    
T  3538465 tgaaatatgttacttttgagcacttatcac 3538436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 34006022 - 34005894
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  34006022 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcatttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 34005923  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  34005922 tgaaatatgttacttttgagcacttatca 34005894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 24161869 - 24161996
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaa-atacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacac 118  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||| ||||||||    
T  24161869 aatcaggcatgtaaagcataaatggtaaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtctctaatttgcctaagttaacac 24161968  T
Q  119 atgaaatatgttac-tttgagcacttatca 147  Q
    ||  || ||||||| |||||||||||||||    
T  24161969 at--aaaatgttacttttgagcacttatca 24161996  T

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Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 31131392 - 31131276
Alignment:
Q  31 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 130  Q
    |||||||||||||||| |||||||  ||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  31131392 taaagcataaatggtataaatacaa-caattgatagattttccttagataacttgcaaaacaagtcactaaaatgcctagattaacacataaaatatgtt 31131294  T
Q  131 ac-tttgagcacttatca 147  Q
    || ||| |||||||||||    
T  31131293 acttttaagcacttatca 31131276  T

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Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 26603742 - 26603636
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| ||||  ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  26603742 aatcaggcatgtaaagcataaatggtaaaagtacaa-caattggtacattttccttagataacttgcaaaacaagtcactaaaatgcctaaattaacaca 26603644  T
Q  120 tgaaatat 127  Q
    ||||||||    
T  26603643 tgaaatat 26603636  T

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Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 15641841 - 15641714
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||| |||||||||||||||||||| |||||||||||||| | ||||  |||||| |    
T  15641841 aatcaggcatgtaaagcataaatggtaaaagtacaa-caattggtagcttttccttagataacttgcagaacaagtcactaaaatacctaatttaacata 15641743  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
     ||| ||  |||| |||||||||||||||    
T  15641742 agaattaaattacttttgagcacttatca 15641714  T

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Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 2298378 - 2298307
Alignment:
Q  56 tcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 127  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||    
T  2298378 tcaaattgtagtttttccttagataacttgcaaaacaagtcactaaagtgtctaaaataacacatgaaatat 2298307  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 5671728 - 5671810
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcaca 149  Q
    |||||| ||||||||||| | |||||||||||||| ||||||  |||||| | ||||||| | || |||||||||||||||||    
T  5671728 ttttccatagataacttgtagaacaagtcactaaaatgcctaaattaacataagaaatatatcacttttgagcacttatcaca 5671810  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 14830461 - 14830392
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 216  Q
    ||||| ||| ||||||||||||||||||| |||| ||||||||||| |||||  ||||| | ||||||||    
T  14830461 acatgtgtagggacattttggacatttactttgggaatgagcgatactgtttgagtaataaacataattc 14830392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 18751341 - 18751394
Alignment:
Q  56 tcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgccta 109  Q
    |||||| |||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  18751341 tcaaattgtagtttttccttaaataacttgcaaaacaagtaactaaagtgccta 18751394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 35060904 - 35060976
Alignment:
Q  147 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaa 219  Q
    ||||||||| || |||||||||||||||| |||||||||||||  |   ||| ||||||||||| ||||||||    
T  35060904 acatgcgtaggggcattttggacatttactttggaaatgagcggaatcatttgggtaatgagcagaattcaaa 35060976  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 24878486 - 24878405
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 148  Q
    |||||| ||||||||||| | |||||||||||||| ||||||   ||||| | ||||||| | || ||||||||||||||||    
T  24878486 ttttccatagataacttgtagaacaagtcactaaaatgcctaaactaacataagaaatatatcacttttgagcacttatcac 24878405  T

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Target: scaffold0015 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 174162 - 174034
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  174162 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacaca 174063  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  174062 tgaaatatgttacttttgagcacttatca 174034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 185320 - 185192
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||| ||| || |||| |||||||||    
T  185320 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttatataacttgcaaaacaagtcattaattttcctaagttaacaca 185221  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  185220 tgaaatatgttacttttgagcacttatca 185192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 354384 - 354513
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||||    
T  354384 aatcaggcatgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgtctaagttaacaca 354483  T
Q  120 tgaaatatgttac-tttgagcacttatcac 148  Q
    ||||||||||||| ||||||||||||||||    
T  354484 tgaaatatgttacttttgagcacttatcac 354513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1494 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold1494
Description:

Target: scaffold1494; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 1082 - 955
Alignment:
Q  20 aatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacaca 119  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  1082 aatcaggcatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgc-aaacaagtcactaatttgcctaagttaacaca 984  T
Q  120 tgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||||||| |||||||||||||||    
T  983 tgaaatatgttacttttgagcacttatca 955  T

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Target: scaffold0014 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 79922 - 80012
Alignment:
Q  58 aaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  79922 aaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatca 80012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 17127 - 17245
Alignment:
Q  30 gtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgt 129  Q
    ||||||||||||||||| ||||||| |||  | || | ||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||    
T  17127 gtaaagcataaatggtacaaatacaatcacttagtggcttttccttagataacttgcaaaacaagtcactaacaagcctaggttaacacataaaatatgt 17226  T
Q  130 tac-tttgagcacttatca 147  Q
    ||| |||||||||||||||    
T  17227 tacttttgagcacttatca 17245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 1975 - 1847
Alignment:
Q  19 aaatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacac 118  Q
    ||||||| |||||||||||||||||||||||  ||||  |  |||||| |||||||||||||||||||| ||||||| |||||| ||||||  |||||||    
T  1975 aaatcaggcatgtaaagcataaatggtaaaagaacaca-atttggtagcttttccttagataacttgcagaacaagtaactaaaatgcctaaattaacac 1877  T
Q  119 atgaaatatgttac-tttgagcacttatca 147  Q
    || ||||||||||| |||||||||||||||    
T  1876 ataaaatatgttacttttgagcacttatca 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 10212 - 10331
Alignment:
Q  31 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 130  Q
    |||||||||||||| |||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||| | ||||  ||||||||| | |||| ||    
T  10212 taaagcataaatggcaaaattacaa-caaatggtagtttttccttagataacttgcaaaacaagtcactaaaatacctaaattaacacataacatatatt 10310  T
Q  131 ac-tttgagcacttatcacat 150  Q
    || ||||||||||||||||||    
T  10311 acttttgagcacttatcacat 10331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0871 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 4407 - 4327
Alignment:
Q  68 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 147  Q
    |||||| ||||||||||| ||||  |||||||||| |||||| | ||||||||||||| | | || |||||||||||||||    
T  4407 ttttccatagataacttgtaaaatcagtcactaaaatgcctaagctaacacatgaaatctatcacttttgagcacttatca 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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