View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14542_high_8 (Length: 225)
Name: NF14542_high_8
Description: NF14542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14542_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 67 - 225
Target Start/End: Complemental strand, 48892386 - 48892228
Alignment:
| Q |
67 |
ttcagagaagaagaccttagtttatctaccaaagcctataagggtcaagaagactttatcatcaataataccaagaactgatataaccttgaatttggaa |
166 |
Q |
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| T |
48892386 |
ttcagagaagaagaccttagtttatctaccaaagcctataagggtcaagaagactttatcatcaataataccaagaactgatataaccttgaatttggaa |
48892287 |
T |
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| Q |
167 |
tacaactcagtaacaacaagccaagaggaagagcaaagaacagaaacaaaagagagaga |
225 |
Q |
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| T |
48892286 |
tacaaatcagtaacaacaagccaagaggaagagcaaagaacagaaacaaaagagagaga |
48892228 |
T |
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