View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14543_low_15 (Length: 212)

Name: NF14543_low_15
Description: NF14543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14543_low_15
NF14543_low_15
[»] chr7 (36 HSPs)
chr7 (14-158)||(17904163-17904307)
chr7 (14-159)||(26770178-26770323)
chr7 (14-158)||(29427297-29427441)
chr7 (14-165)||(46467468-46467619)
chr7 (14-159)||(37179465-37179609)
chr7 (14-159)||(6389731-6389876)
chr7 (14-158)||(6387825-6387969)
chr7 (14-150)||(9876271-9876407)
chr7 (14-158)||(29890959-29891103)
chr7 (14-158)||(41921987-41922131)
chr7 (14-158)||(4405109-4405253)
chr7 (35-154)||(31503091-31503210)
chr7 (49-158)||(19523863-19523974)
chr7 (59-155)||(9332364-9332460)
chr7 (16-143)||(33974506-33974636)
chr7 (14-158)||(12252069-12252216)
chr7 (14-138)||(9215595-9215722)
chr7 (43-158)||(29722955-29723070)
chr7 (43-158)||(43701551-43701666)
chr7 (14-143)||(46689878-46690011)
chr7 (14-158)||(31858225-31858371)
chr7 (43-159)||(33379130-33379245)
chr7 (81-143)||(49011058-49011120)
chr7 (13-158)||(33915717-33915863)
chr7 (14-100)||(48049057-48049146)
chr7 (14-138)||(5514797-5514923)
chr7 (125-161)||(29723381-29723417)
chr7 (125-161)||(37179328-37179364)
chr7 (157-195)||(243339-243377)
chr7 (125-158)||(4405353-4405386)
chr7 (125-158)||(17904407-17904440)
chr7 (125-158)||(29890826-29890859)
chr7 (126-158)||(46467335-46467367)
chr7 (125-160)||(6387690-6387725)
chr7 (14-68)||(22753201-22753257)
chr7 (126-158)||(26770424-26770456)
[»] chr8 (24 HSPs)
chr8 (14-158)||(33837862-33838006)
chr8 (14-158)||(2508929-2509073)
chr8 (14-158)||(28378947-28379091)
chr8 (14-158)||(45334409-45334553)
chr8 (28-153)||(13469652-13469777)
chr8 (14-158)||(25106211-25106355)
chr8 (14-160)||(38495605-38495751)
chr8 (14-158)||(9739985-9740129)
chr8 (35-158)||(27793345-27793468)
chr8 (14-114)||(2626371-2626472)
chr8 (14-158)||(32183614-32183759)
chr8 (89-158)||(27024433-27024502)
chr8 (91-158)||(25978969-25979036)
chr8 (43-158)||(8235162-8235276)
chr8 (43-123)||(3203413-3203492)
chr8 (125-161)||(33837726-33837762)
chr8 (96-143)||(2626667-2626714)
chr8 (126-159)||(9740231-9740264)
chr8 (125-158)||(25106455-25106488)
chr8 (125-158)||(27027655-27027688)
chr8 (125-158)||(28379191-28379224)
chr8 (125-158)||(45334276-45334309)
chr8 (125-160)||(38495470-38495505)
chr8 (126-158)||(13469508-13469540)
[»] chr6 (16 HSPs)
chr6 (14-158)||(27312249-27312393)
chr6 (14-158)||(32274434-32274578)
chr6 (14-156)||(8504835-8504977)
chr6 (14-151)||(5003889-5004026)
chr6 (14-158)||(29452675-29452820)
chr6 (56-158)||(12174700-12174802)
chr6 (14-159)||(31171123-31171268)
chr6 (43-161)||(18741944-18742062)
chr6 (14-97)||(2543142-2543225)
chr6 (14-158)||(7156370-7156502)
chr6 (110-158)||(29302500-29302548)
chr6 (125-158)||(8504733-8504766)
chr6 (125-158)||(27312114-27312147)
chr6 (125-158)||(2543325-2543358)
chr6 (125-158)||(32274678-32274711)
chr6 (126-158)||(18742191-18742223)
[»] chr5 (24 HSPs)
chr5 (14-158)||(12399079-12399223)
chr5 (14-158)||(34208538-34208682)
chr5 (14-158)||(29874954-29875098)
chr5 (14-158)||(23090298-23090442)
chr5 (14-158)||(4145694-4145838)
chr5 (14-160)||(4695295-4695441)
chr5 (19-158)||(3077597-3077736)
chr5 (24-143)||(42757953-42758072)
chr5 (14-93)||(22646042-22646121)
chr5 (43-143)||(12096365-12096466)
chr5 (43-158)||(41610579-41610694)
chr5 (89-160)||(42793038-42793109)
chr5 (91-155)||(4434783-4434847)
chr5 (125-160)||(12398944-12398979)
chr5 (14-137)||(22528023-22528149)
chr5 (125-159)||(42757804-42757838)
chr5 (125-158)||(29875198-29875231)
chr5 (125-158)||(42793562-42793595)
chr5 (126-158)||(23090543-23090575)
chr5 (126-158)||(41610373-41610405)
chr5 (47-158)||(19574686-19574795)
chr5 (109-143)||(594328-594362)
chr5 (89-155)||(8718028-8718094)
chr5 (125-158)||(34208782-34208815)
[»] chr3 (35 HSPs)
chr3 (14-158)||(18996967-18997111)
chr3 (14-158)||(18999506-18999650)
chr3 (14-158)||(29371671-29371815)
chr3 (14-158)||(32677610-32677754)
chr3 (14-158)||(39528749-39528893)
chr3 (15-158)||(1352130-1352273)
chr3 (14-158)||(41349504-41349648)
chr3 (14-168)||(28228426-28228580)
chr3 (14-158)||(39807112-39807256)
chr3 (14-158)||(55365908-55366052)
chr3 (14-155)||(21974152-21974293)
chr3 (14-155)||(21996583-21996724)
chr3 (14-158)||(36737967-36738111)
chr3 (14-152)||(38855323-38855461)
chr3 (14-155)||(22157261-22157402)
chr3 (23-151)||(29014832-29014960)
chr3 (14-143)||(39518422-39518551)
chr3 (14-160)||(32839947-32840092)
chr3 (14-143)||(49040977-49041107)
chr3 (89-161)||(49319344-49319416)
chr3 (125-160)||(1351994-1352029)
chr3 (125-159)||(39528993-39529027)
chr3 (125-158)||(18997211-18997244)
chr3 (125-158)||(18999750-18999783)
chr3 (125-158)||(29014690-29014723)
chr3 (125-158)||(36737834-36737867)
chr3 (125-158)||(38855561-38855594)
chr3 (125-158)||(39518651-39518684)
chr3 (125-158)||(41349371-41349404)
chr3 (126-158)||(46878980-46879012)
chr3 (46-133)||(837370-837455)
chr3 (125-158)||(29371538-29371571)
chr3 (125-158)||(32677477-32677510)
chr3 (125-158)||(39806979-39807012)
chr3 (52-152)||(34667662-34667762)
[»] chr1 (29 HSPs)
chr1 (15-160)||(46220257-46220402)
chr1 (14-158)||(47669119-47669263)
chr1 (14-158)||(10737834-10737978)
chr1 (20-158)||(4817269-4817407)
chr1 (14-159)||(9831502-9831647)
chr1 (14-165)||(18126844-18126994)
chr1 (14-159)||(3384728-3384871)
chr1 (22-158)||(4055484-4055620)
chr1 (14-158)||(48564818-48564961)
chr1 (19-143)||(8889457-8889581)
chr1 (14-157)||(7414208-7414351)
chr1 (56-158)||(1236205-1236307)
chr1 (14-138)||(39241172-39241296)
chr1 (89-161)||(33020203-33020275)
chr1 (79-158)||(1749521-1749600)
chr1 (43-135)||(26842462-26842552)
chr1 (43-158)||(33846820-33846935)
chr1 (43-158)||(33947043-33947158)
chr1 (30-101)||(37875849-37875920)
chr1 (125-158)||(10737701-10737734)
chr1 (125-158)||(46220503-46220536)
chr1 (125-158)||(47669363-47669396)
chr1 (125-157)||(1236071-1236103)
chr1 (127-158)||(48565063-48565094)
chr1 (43-143)||(49112439-49112535)
chr1 (125-155)||(9831747-9831777)
chr1 (125-158)||(8889687-8889720)
chr1 (125-158)||(33023428-33023461)
chr1 (125-158)||(37875727-37875760)
[»] chr2 (15 HSPs)
chr2 (14-156)||(15233757-15233899)
chr2 (14-158)||(43040982-43041126)
chr2 (14-158)||(35793040-35793183)
chr2 (14-158)||(41252415-41252559)
chr2 (20-158)||(31296083-31296221)
chr2 (15-161)||(44104683-44104836)
chr2 (14-158)||(41642891-41643038)
chr2 (14-143)||(31903513-31903641)
chr2 (89-158)||(10118660-10118729)
chr2 (21-143)||(21727684-21727809)
chr2 (125-160)||(43040847-43040882)
chr2 (125-158)||(10112339-10112372)
chr2 (125-158)||(15233999-15234032)
chr2 (89-158)||(36963131-36963200)
chr2 (126-158)||(44104546-44104578)
[»] chr4 (20 HSPs)
chr4 (14-158)||(45590742-45590886)
chr4 (14-158)||(8955909-8956053)
chr4 (14-148)||(34334342-34334476)
chr4 (14-158)||(33288538-33288682)
chr4 (14-152)||(49162108-49162245)
chr4 (14-160)||(18835703-18835851)
chr4 (66-158)||(30469353-30469445)
chr4 (59-155)||(39481906-39482002)
chr4 (14-143)||(50774191-50774325)
chr4 (14-92)||(36971115-36971192)
chr4 (89-158)||(19256186-19256255)
chr4 (43-143)||(26025685-26025784)
chr4 (108-158)||(36016279-36016329)
chr4 (89-143)||(36968353-36968407)
chr4 (14-143)||(33109031-33109163)
chr4 (124-158)||(19257103-19257137)
chr4 (125-155)||(8955779-8955809)
chr4 (125-158)||(45590986-45591019)
chr4 (125-158)||(49162332-49162365)
chr4 (125-157)||(39482106-39482138)
[»] scaffold0103 (1 HSPs)
scaffold0103 (14-158)||(44619-44764)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 17904307 - 17904163
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17904307 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 17904208  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17904207 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 17904163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 26770323 - 26770178
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  26770323 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatt 26770224  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26770223 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 26770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 29427297 - 29427441
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29427297 caaagatcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 29427396  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29427397 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29427441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 46467468 - 46467619
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46467468 caaaggtcgcaactactttaatagtttattgtgttttccaacaaaggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 46467567  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacttcata 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46467568 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactacata 46467619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 37179465 - 37179609
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  37179465 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaactt-agaaaacaataataaattcactaaaacatcaaaagttttggaata 37179563  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37179564 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 37179609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 6389876 - 6389731
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6389876 caaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 6389777  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  6389776 tagttgaagttctaaaacatcaaaacaaaatgaatggagggagtac 6389731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 6387825 - 6387969
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  6387825 caaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgataaaacaataacaaattcactaaaacatcaaaagttttggaata 6387924  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  6387925 tagttgcagttctaaaacatcaaaagaaaaggaatggagggagta 6387969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 9876407 - 9876271
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9876407 caaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataataaattcactaaaacatcaaaagttttggaata 9876308  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatgg 150  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9876307 tagttgaagttttaaaacatcaaaagaaaaggaatgg 9876271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 29890959 - 29891103
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  29890959 caaaagtcacaactactttaatagtttattgtgttttccatcaaggataaacttgagaaaacaatcataaattcactaaaacatcaaaaattttggaata 29891058  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  29891059 tagttgaagttttaaaacatcaaaagaaaaggaatggagggagta 29891103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 41921987 - 41922131
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  41921987 caaaggttgcaactactttaatagtttattgtgtttttcaacaagggtaaacttgataaaacaatattaaattcactaaaacatcaaaagttttggaata 41922086  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  41922087 tagttgaagttctaaaacatcaaaagaaaagaaatagagggagta 41922131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 4405253 - 4405109
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  4405253 caaaggtcacaactactttaataatttatggtgttttccaacaaggataaaattgagaaaacaataataaattcactaaaacatcaaatgttttagaata 4405154  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  4405153 tagttgaagttttaaaacatcaaaagaaaagaaatggagggagta 4405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 31503091 - 31503210
Alignment:
Q  35 tagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 134  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31503091 tagtttatagtgttttccaacaagggtaaacttaagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 31503190  T
Q  135 aaaagaaaaggaatggaggg 154  Q
    ||||||||||||| ||||||    
T  31503191 aaaagaaaaggaacggaggg 31503210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 19523863 - 19523974
Alignment:
Q  49 ttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatca--aaagaaaagga 146  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||    
T  19523863 ttccaacaagggtaaacttgataaaacaataataaattcactaaaacatcaaaaattttggaatatagttgaagttctaaaacatcaacaaaaaaaagga 19523962  T
Q  147 atggagggagta 158  Q
    || |||||||||    
T  19523963 atagagggagta 19523974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 9332460 - 9332364
Alignment:
Q  59 ggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  9332460 ggtaaacctgagaaaacaataataaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaaaaaatggaggga 9332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 33974636 - 33974506
Alignment:
Q  16 aaggtcacaactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaat 112  Q
    |||||||||||| |||||||||||| ||  |||||||| ||||||||||||||||| ||||| |||| ||||| ||||||||||| |||  |||||||||    
T  33974636 aaggtcacaactcctttaatagttttatggtgtgtttttcaacaagggtaaacttgggaaaaaaatattaaatatactaaaacataaaatattttggaat 33974537  T
Q  113 atagttgaagttctaaaacatcaaaagaaaa 143  Q
    ||||||||||||| |||||||||||||||||    
T  33974536 atagttgaagttcgaaaacatcaaaagaaaa 33974506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 12252216 - 12252069
Alignment:
Q  14 caaaggtcacaactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgga 110  Q
    |||| |||| |||| |||||||||||| ||  |||||||| |||| || ||||||||| |||||||| | ||||| || || |||||||||  |||||||    
T  12252216 caaaagtcataactcctttaatagttttatggtgtgtttttcaactagagtaaacttgggaaaacaagattaaatatattagaacatcaaatattttgga 12252117  T
Q  111 atatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||    
T  12252116 atatagttgaagttctaaaacatcaaaagaaaaaaaatggagggagta 12252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 9215595 - 9215722
Alignment:
Q  14 caaaggtcacaactactttaatagttt-attgtgt--tttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgga 110  Q
    |||||||||||||| |||||||| ||| || ||||  ||| ||||||||||||| |||| |||| |||| || || ||||||||||| |||  |||||||    
T  9215595 caaaggtcacaactcctttaataattttatggtgtctttttcaacaagggtaaatttgaaaaaaaaatattacatatactaaaacattaaatattttgga 9215694  T
Q  111 atatagttgaagttctaaaacatcaaaa 138  Q
    ||||||||||||||||||||||||||||    
T  9215695 atatagttgaagttctaaaacatcaaaa 9215722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 29723070 - 29722955
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    |||||||| ||||||||||||| |||   ||| | |||||||  |  |||||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  29723070 tgtgtttttcaacaagggtaaaattggataaaaagtaataaaaattataaaacatcaaaagttttggaataaagtttaagttctaaaatatcaaaagaaa 29722971  T
Q  143 aggaatggagggagta 158  Q
    |||||||||| |||||    
T  29722970 aggaatggagagagta 29722955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 43701666 - 43701551
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    |||||||| ||||||||||||| |||   ||| |||| ||||  | |||||||||||||  |||||||||  |||| |||||||||||||||||||||||    
T  43701666 tgtgtttttcaacaagggtaaaattggataaaaaatattaaaaattctaaaacatcaaattttttggaatgaagtttaagttctaaaacatcaaaagaaa 43701567  T
Q  143 aggaatggagggagta 158  Q
    ||||||||||||||||    
T  43701566 aggaatggagggagta 43701551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 46690011 - 46689878
Alignment:
Q  14 caaaggtcacaactactttaatagttt-attgtgt---tttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgg 109  Q
    |||| ||||||||| |||||||||||| || ||||   ||| ||| ||||||||||||| ||||| |||| |||   ||||||||||||||   ||||||    
T  46690011 caaatgtcacaacttctttaatagttttatcgtgtgttttttcaaaaagggtaaacttgggaaaaaaatattaaccatactaaaacatcaagtattttgg 46689912  T
Q  110 aatatagttgaagttctaaaacatcaaaagaaaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  46689911 aatatagttgaagttctaaaacatcaaaagaaaa 46689878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 31858225 - 31858371
Alignment:
Q  14 caaaggtcacaactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgga 110  Q
    ||||||||||||||  ||||||| ||| ||  |||||||| |||| |||||||| ||| ||||| || | ||||| |||||||||||||||  ||||  |    
T  31858225 caaaggtcacaactcatttaatacttttatgatgtgtttttcaacgagggtaaatttgggaaaaaaa-attaaatatactaaaacatcaaatattttaaa 31858323  T
Q  111 atatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||    
T  31858324 atatagttgaagttgtaaaacatcaaaagaaaaaaaatggagggagta 31858371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 33379130 - 33379245
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    |||||||| ||||||||||||| ||| || || |||| ||||  | |||||||||||||  ||||| |||  ||||||||||||||||||||||||||||    
T  33379130 tgtgtttttcaacaagggtaaaattg-gataaaaatattaaaaatcctaaaacatcaaatattttgaaatcaagttgaagttctaaaacatcaaaagaaa 33379228  T
Q  143 aggaatggagggagtac 159  Q
    || ||||||||||||||    
T  33379229 agaaatggagggagtac 33379245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 49011058 - 49011120
Alignment:
Q  81 taaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 143  Q
    ||||| ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  49011058 taaatatactaaaacatcaaatgttttgaaatatagttgaagtcctaaaacatcaaaagaaaa 49011120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 33915863 - 33915717
Alignment:
Q  13 gcaaaggtcacaactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgg 109  Q
    ||||||||||||||   ||||||||||| ||  |||||||| |||||||| |||||||| ||||| || | ||||| |||||||||||||||  |||||     
T  33915863 gcaaaggtcacaacctatttaatagttttatggtgtgtttttcaacaagg-taaacttgggaaaaaaaaattaaatatactaaaacatcaaatattttga 33915765  T
Q  110 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||| || ||| |||||| ||||||||||  |||||||||||||    
T  33915764 aatatagttaaaattcaaaaacaacaaaagaaaa-aaatggagggagta 33915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 48049146 - 48049057
Alignment:
Q  14 caaaggtcacaactactttaatagttt---attgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaa 100  Q
    |||||||||||||| ||||||||||||   | |||||||| ||||| ||||||||||| ||||| |||| ||||| ||||||||||||||    
T  48049146 caaaggtcacaactcctttaatagttttctagtgtgtttttcaacaggggtaaacttgggaaaaaaatattaaatatactaaaacatcaa 48049057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 5514923 - 5514797
Alignment:
Q  14 caaaggtcacaactactttaatagttt---attgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgga 110  Q
    ||||||||||||||  |||||||||||   | ||||||||  ||||||||||||||||| || | |||| ||||| |||||||  ||||||  |||| ||    
T  5514923 caaaggtcacaactcttttaatagttttatagtgtgttttttaacaagggtaaacttgaaaata-aatattaaatatactaaataatcaaatattttaga 5514825  T
Q  111 atatagttgaagttctaaaacatcaaaa 138  Q
    ||||| || |||||||||||||| ||||    
T  5514824 atatatttaaagttctaaaacattaaaa 5514797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 29723381 - 29723417
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtactt 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  29723381 ctaaaacatcaaaagaaaaggaatggagggagtactt 29723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 37179364 - 37179328
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtactt 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  37179364 ctaaaacatcaaaagaaaaggaatggagggagtactt 37179328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 243339 - 243377
Alignment:
Q  157 tacttcataattggatgtctatttagtgtagtgctagat 195  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  243339 tacttcataattggatgtctatttagtgtagtgttagat 243377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 4405353 - 4405386
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  4405353 ctaaaacatcaaaagaaaaggaatggagggagta 4405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 17904407 - 17904440
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  17904407 ctaaaacatcaaaagaaaaggaatggagggagta 17904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 29890859 - 29890826
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  29890859 ctaaaacatcaaaagaaaaggaatggagggagta 29890826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 46467367 - 46467335
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||    
T  46467367 taaaacatcaaaagaaaaggaatggagggagta 46467335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 6387725 - 6387690
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6387725 ctaaaacatcaaaagaaaaggaatggaggaagtact 6387690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 22753201 - 22753257
Alignment:
Q  14 caaaggtcacaactactttaatagtttat--tgtgttttccaacaagggtaaacttg 68  Q
    ||||||||||||||  |||||||||||||  | |||||||||||||| |||||||||    
T  22753201 caaaggtcacaacttttttaatagtttatagtttgttttccaacaagcgtaaacttg 22753257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 26770424 - 26770456
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||| ||||||||||||||    
T  26770424 taaaacatcaaaagaaaatgaatggagggagta 26770456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 33837862 - 33838006
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  33837862 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 33837961  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33837962 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 33838006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 2508929 - 2509073
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2508929 caaaggtcacaactactttaatagtttactgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 2509028  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2509029 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 2509073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 28379091 - 28378947
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28379091 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 28378992  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  28378991 tagttgaagttctaaaacatcaaaagaaaaataatggagggagta 28378947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 45334409 - 45334553
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  45334409 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgaaaaaacaataacaaattcactaaaacatcaaaagttttggaata 45334508  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  45334509 tagttaaagttctaaaacatcaaaagaaaaggaatggagggagta 45334553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 13469652 - 13469777
Alignment:
Q  28 actttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttcta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13469652 actttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaattataaatttactaaaatatcaaaagttttggaatatagttgaagttcta 13469751  T
Q  128 aaacatcaaaagaaaaggaatggagg 153  Q
    ||||||||||||||||||||||||||    
T  13469752 aaacatcaaaagaaaaggaatggagg 13469777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 25106355 - 25106211
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||    
T  25106355 caaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgaaaaaacaatcataaattcactaaaacatcaaaaattttggaata 25106256  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  25106255 tagttgaagttctaaaacatcaaaagaaaaggaatggagagagta 25106211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 38495605 - 38495751
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| |||||    
T  38495605 caaatgtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcaccaaaacatcaaaaattttagaata 38495704  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  38495705 tagttgaagttctaaaacatcacaagaaaaagaatggaggaagtact 38495751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 9740129 - 9739985
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| | ||||||||||||||||||| ||||    
T  9740129 caaatgtcacaactactttaatagtttattgtgtttttcaacaaggataaacttgagaaagcaataataaattcagtaaaacatcaaaagttttgaaata 9740030  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||  |||||||||||||||||||||||||||||||||||||||||    
T  9740029 tacatgaagttctaaaacatcaaaagaaaaggaatggagggagta 9739985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 27793345 - 27793468
Alignment:
Q  35 tagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 134  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  27793345 tagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacattaaaagttttggaatatagttgaagatctaaaacatc 27793444  T
Q  135 aaaagaaaaggaatggagggagta 158  Q
    ||||||||| ||||||| ||||||    
T  27793445 aaaagaaaatgaatggaaggagta 27793468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 2626371 - 2626472
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaac-aataataaatttactaaaacatcaaaagttttggaat 112  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  2626371 caaaggtcacaattactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaaataataaattcactaaaacatcaaaagttttggaat 2626470  T
Q  113 at 114  Q
    ||    
T  2626471 at 2626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 32183614 - 32183759
Alignment:
Q  14 caaaggtcacaactactttaatagtttat--tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaa 111  Q
    |||||||| ||||| ||| ||||||||||  |||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||  ||||||||    
T  32183614 caaaggtcgcaactcctt-aatagtttatggtgtgttttccaacaagggtaaacttgggaaaaaaatattaaatatactaaaacatcaaatattttggaa 32183712  T
Q  112 tatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||    
T  32183713 tatagttgaagttctaaaacatcaaaagaaaaaaaatgaagggagta 32183759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 27024502 - 27024433
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  27024502 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagta 27024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 25978969 - 25979036
Alignment:
Q  91 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||| |||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  25978969 aaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggagggagta 25979036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 8235276 - 8235162
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    |||||||| ||||||||||||| ||||  ||| |||| ||||  |  |||||||||||| |||||| |||| | ||||||| ||||||||||||||||||    
T  8235276 tgtgtttttcaacaagggtaaaattgaagaaa-aatattaaaaatcttaaaacatcaaatgttttgaaataaaattgaagtcctaaaacatcaaaagaaa 8235178  T
Q  143 aggaatggagggagta 158  Q
    |  |||||||||||||    
T  8235177 ataaatggagggagta 8235162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 3203413 - 3203492
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagt 123  Q
    |||||||| |||||| | |||||||||||||| |||| ||||| |||||||||||||||  ||||  ||||||||||||||    
T  3203413 tgtgtttttcaacaaagataaacttgagaaaa-aatattaaatatactaaaacatcaaatattttaaaatatagttgaagt 3203492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 33837762 - 33837726
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtactt 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  33837762 ctaaaacatcaaaagaaaaggaatggagggagtactt 33837726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 2626667 - 2626714
Alignment:
Q  96 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 143  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  2626667 atcaaaagttttggaatatagttgaagttctaaaatataaaaaaaaaa 2626714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 9740231 - 9740264
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagtac 159  Q
    ||||||||||||||||||||||||||||||||||    
T  9740231 taaaacatcaaaagaaaaggaatggagggagtac 9740264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 25106455 - 25106488
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  25106455 ctaaaacatcaaaagaaaaggaatggagggagta 25106488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 27027655 - 27027688
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  27027655 ctaaaacatcaaaagaaaaggaatggagggagta 27027688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 28379191 - 28379224
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  28379191 ctaaaacatcaaaagaaaaggaatggagggagta 28379224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 45334309 - 45334276
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  45334309 ctaaaacatcaaaagaaaaggaatggagggagta 45334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 38495505 - 38495470
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38495505 ctaaaacatcaaaagaaaatgaatggagggagtact 38495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 13469540 - 13469508
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||| ||||||    
T  13469540 taaaacatcaaaagaaaaggaatggaaggagta 13469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 27312249 - 27312393
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  27312249 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaatgttttggaata 27312348  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27312349 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 27312393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 32274578 - 32274434
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  32274578 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 32274479  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32274478 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 32274434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 8504835 - 8504977
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  8504835 caaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacctgagaaaataataataaattcactaaaacatcaaaagttttgaaata 8504934  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggag 156  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  8504935 tagttgaagttctaaaacatcaaaagaaaatgaatggagggag 8504977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 5004026 - 5003889
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  5004026 caaatgtcaaaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttgaaata 5003927  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatgga 151  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  5003926 tagttgaagttctaaaacatcaaaaaaaaatgaatgga 5003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 29452675 - 29452820
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaa-taataaatttactaaaacatcaaaagttttggaat 112  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |  ||| ||||    
T  29452675 caaaggtcacaactattttaatagtttatggtgttttccaacaagtgtaaacttgagaaaacaagtaataaattcactaaaacatcaagaaatttagaat 29452774  T
Q  113 atagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  29452775 atagttgaagttctaaaacatcagaagaaaagaaatggagggagta 29452820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 12174802 - 12174700
Alignment:
Q  56 aagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  12174802 aagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatatttaaagttctaaaacattaaaagaaaaggaatggaggga 12174703  T
Q  156 gta 158  Q
    |||    
T  12174702 gta 12174700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 31171123 - 31171268
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||| ||||||||||||  ||||||||||| || | |||||||||||||||||||||||||| |||| |||||| || |||||||||||    
T  31171123 caaaggtcacaactattttaatagtttaaggtgttttccaataaagataaacttgagaaaacaataataaattcactacaacatctaatgttttggaata 31171222  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
     | ||||| ||||||| |||||||||||||| ||||||||||||||    
T  31171223 catttgaatttctaaatcatcaaaagaaaagaaatggagggagtac 31171268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 18742062 - 18741944
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    |||||||| ||||||||||||| ||||||| |||||| ||||| ||||||||||||||| |||||| |||| ||||||||| ||||||||||||||||||    
T  18742062 tgtgtttttcaacaagggtaaatttgagaatacaatattaaatatactaaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaa 18741963  T
Q  143 aggaatggagggagtactt 161  Q
    || ||||||||||||||||    
T  18741962 agaaatggagggagtactt 18741944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 2543225 - 2543142
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacat 97  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  2543225 caaatgtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcactaaaacat 2543142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 7156370 - 7156502
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||            |||||||||||||||| ||||||||||| ||||||||||||||    
T  7156370 caaatgtcacaattactttaatagtttatggtgttttccaacaag------------aaaacaataataaattcactaaaacatctaaagttttggaata 7156457  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||   ||||||||||||||||||||| |||||||||||||    
T  7156458 tagttgattgtctaaaacatcaaaagaaaagaaatggagggagta 7156502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 29302500 - 29302548
Alignment:
Q  110 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29302500 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29302548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 8504766 - 8504733
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  8504766 ctaaaacatcaaaagaaaaggaatggagggagta 8504733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 27312147 - 27312114
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  27312147 ctaaaacatcaaaagaaaaggaatggagggagta 27312114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 2543325 - 2543358
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||    
T  2543325 ctaaaacatcaaaagaaaacgaatggagggagta 2543358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 32274678 - 32274711
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||    
T  32274678 ctaaaacatcaaaagaaaatgaatggagggagta 32274711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 18742191 - 18742223
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||| |||||||||||||    
T  18742191 taaaacatcaaaagaaaagaaatggagggagta 18742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 12399079 - 12399223
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  12399079 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 12399178  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12399179 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 12399223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 34208682 - 34208538
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  34208682 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 34208583  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34208582 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 34208538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 29875098 - 29874954
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  29875098 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaatgttttggaata 29874999  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  29874998 tagttgaagttctaaaacatcaaaagaaaaagaatggagggagta 29874954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 23090442 - 23090298
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  23090442 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaaattttggaata 23090343  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  23090342 cagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 23090298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 4145838 - 4145694
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  4145838 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttaagaaaacaataacaaattcactaaaacatcaaaagttttggaata 4145739  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  4145738 tagttaaagttctaaaacatcaaaagaaaaggaatggagcgagta 4145694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 4695295 - 4695441
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  4695295 caaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttgaaata 4695394  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  4695395 tagttgaagttctaaaaaatcaaaagaaaaggaatgaagggagtact 4695441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 3077736 - 3077597
Alignment:
Q  19 gtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagtt 118  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||    
T  3077736 gtcacaactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaataacaaattcactaaaacatcaaaagttttaaaatatagtt 3077637  T
Q  119 gaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||| ||||||||||||||||||||| ||||||||||||||    
T  3077636 gaaattctaaaacatcaaaagaaaatgaatggagggagta 3077597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 42757953 - 42758072
Alignment:
Q  24 aactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagt 123  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||    
T  42757953 aactactttaatagtttatcgtgttttccaacaaggataaacttgagaaaacaataataaattcactaaaacatcaaaagttttgaaaaatagttgaagt 42758052  T
Q  124 tctaaaacatcaaaagaaaa 143  Q
    |||||||||| |||| ||||    
T  42758053 tctaaaacataaaaaaaaaa 42758072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 22646042 - 22646121
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaa 93  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  22646042 caaaagtcacaactactttaatagtttatggtgtttttcaacaaggttaaacttgagaaaacaataataaattcactaaa 22646121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 12096365 - 12096466
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatt-tactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaa 141  Q
    |||||||| ||||||| ||| ||||||||||| |||| |||| | || |||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  12096365 tgtgtttttcaacaagagtacacttgagaaaagaatattaaaatatattaaaacatcaaatgttttggaatatagttgaagtcctaaaacatcaaaagaa 12096464  T
Q  142 aa 143  Q
    ||    
T  12096465 aa 12096466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 41610579 - 41610694
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    ||||||||  |||||||||||| |||   ||| | || |||| || ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  41610579 tgtgttttttaacaagggtaaaattggataaaaagtattaaaatttctaaaacatcaaaagttttggaataaagtttaagttctaaaacatcaaaagaaa 41610678  T
Q  143 aggaatggagggagta 158  Q
    || ||||||| |||||    
T  41610679 agaaatggagagagta 41610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 42793109 - 42793038
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||    
T  42793109 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagtgagtact 42793038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 4434847 - 4434783
Alignment:
Q  91 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    |||||||||||  | ||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  4434847 aaaacatcaaatatcttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggaggga 4434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 12398979 - 12398944
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  12398979 ctaaaacatcaaaagaaaaggaatggagggagtact 12398944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 22528149 - 22528023
Alignment:
Q  14 caaaggtcacaactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgga 110  Q
    ||||||||||||||  ||||||||||| ||  |||||||| |||||| |||||| |||  | || | || ||||| |||||||||||||||  |||||||    
T  22528149 caaaggtcacaactcttttaatagttttatggtgtgtttttcaacaaaggtaaatttggaataaaattattaaatgtactaaaacatcaaatattttgga 22528050  T
Q  111 atatagttgaagttctaaaacatcaaa 137  Q
     |||| ||||||| |||||| ||||||    
T  22528049 gtataattgaagtcctaaaatatcaaa 22528023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 42757838 - 42757804
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
    |||||||||||||||||||||||||||||||||||    
T  42757838 ctaaaacatcaaaagaaaaggaatggagggagtac 42757804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 29875198 - 29875231
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  29875198 ctaaaacatcaaaagaaaaggaatggagggagta 29875231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 42793562 - 42793595
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  42793562 ctaaaacatcaaaagaaaaggaatggagggagta 42793595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 23090543 - 23090575
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||    
T  23090543 taaaacatcaaaagaaaaggaatggagggagta 23090575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 41610405 - 41610373
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||    
T  41610405 taaaacatcaaaagaaaaggaatggagggagta 41610373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 19574795 - 19574686
Alignment:
Q  47 ttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaagga 146  Q
    |||| |||||||||| | |||| ||||| |||| ||||| || |||||||| |||  ||||| ||| || ||||||| |||||||||||||||| ||  |    
T  19574795 tttttcaacaagggtgaccttgggaaaa-aatattaaatatattaaaacattaaatattttgaaatttaattgaagtcctaaaacatcaaaagacaa-aa 19574698  T
Q  147 atggagggagta 158  Q
    ||||||||||||    
T  19574697 atggagggagta 19574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 594328 - 594362
Alignment:
Q  109 gaatatagttgaagttctaaaacatcaaaagaaaa 143  Q
    |||||||||||||||| ||||||||||||||||||    
T  594328 gaatatagttgaagttttaaaacatcaaaagaaaa 594362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 8718094 - 8718028
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    |||||||||||||  ||||| |||| ||||||| |  ||||| ||||||||||||| ||||||||||    
T  8718094 ctaaaacatcaaatattttgaaataaagttgaaatcttaaaatatcaaaagaaaagaaatggaggga 8718028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 34208782 - 34208815
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||| |||||||||||||||||||    
T  34208782 ctaaaacatcaaaaaaaaaggaatggagggagta 34208815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 18997111 - 18996967
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18997111 caaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 18997012  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18997011 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18996967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 18999650 - 18999506
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18999650 caaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 18999551  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18999550 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18999506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 29371671 - 29371815
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29371671 caaaggtcacaagtactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 29371770  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29371771 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29371815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 32677610 - 32677754
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  32677610 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggtata 32677709  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32677710 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 32677754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 39528893 - 39528749
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  39528893 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 39528794  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39528793 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 39528749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 1352130 - 1352273
Alignment:
Q  15 aaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1352130 aaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatat 1352229  T
Q  115 agttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1352230 agttgaagttctaaaacatcaaaagaaaaggaatggagggagta 1352273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 41349504 - 41349648
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  41349504 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttagaata 41349603  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  41349604 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 41349648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 28228580 - 28228426
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28228580 caaatgtcacagctactttaatagtttattgtattttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 28228481  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacttcataatt 168  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  28228480 tagttgaagttctaaaacatcaaaagaaaaggaatggagagagtagttcttaatt 28228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 39807112 - 39807256
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  39807112 caaaggtcacaactactttaatagtttattgtgttttccaacgagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttgtaata 39807211  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  39807212 tagttgaagttctaaaacatcaaaagaaaaggaatggaggaagta 39807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 55366052 - 55365908
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||    
T  55366052 caaaggtcacaactactttaatagtttattgtgttttctaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaaaatttgaaata 55365953  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  55365952 tagttgaagttctaaaacatcaaaagaaaaggaatgaagggagta 55365908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 21974293 - 21974152
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  21974293 caaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcactaaaacatcaaaagttttggaata 21974194  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  21974193 tagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21974152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 21996724 - 21996583
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  21996724 caaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcactaaaacatcaaaagttttggaata 21996625  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  21996624 tagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21996583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 36737967 - 36738111
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  36737967 caaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttaaaata 36738066  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||    
T  36738067 tagttaaagttctaaaacatcaaaagaaaaggaatgaatggagta 36738111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 38855461 - 38855323
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38855461 caaaggtcacaactactttaatagtttatggtgtttttcaacaaggataaaattgagaaaacaataataaattcactaaaacatcaaaagttttggaata 38855362  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggag 152  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  38855361 tagttgatgttttaaaacatcaaaagaaaaggaatggag 38855323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 22157402 - 22157261
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||    
T  22157402 caaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcactaaaatatcaaaagttttagaata 22157303  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  22157302 tagttgaagttctaaaacatcaaaagaaaagaaatggaggga 22157261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 29014832 - 29014960
Alignment:
Q  23 caactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaag 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29014832 caactactttaatagtttaatgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaag 29014931  T
Q  123 ttctaaaacatcaaaagaaaaggaatgga 151  Q
    ||||||||||| |||| |||| |||||||    
T  29014932 ttctaaaacataaaaaaaaaaagaatgga 29014960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 39518551 - 39518422
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  39518551 caaatgtcataactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaataataaattcactaaaatatcaaaagttttgaaata 39518452  T
Q  114 tagttgaagttctaaaacatcaaaagaaaa 143  Q
    ||||||||||| ||||||||||||| ||||    
T  39518451 tagttgaagttttaaaacatcaaaaaaaaa 39518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 32840092 - 32839947
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||  |||||| |||||| |||||||| || |||||||||||||||  |||  ||||    
T  32840092 caaatgtcacaactattttaatagtttattgtgttttctaacaaggacaaacttaagaaaataataataa-ttcactaaaacatcaaaaaatttaaaata 32839994  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  32839993 tagttgaagttctaaaatataaaaagaaaatgaatggagggagtact 32839947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 49040977 - 49041107
Alignment:
Q  14 caaaggtcacaactactttaatagtttattg---tgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgga 110  Q
    |||||||| ||||| ||||||||||||  ||   |||||| |||||||||||||| || |||||  ||| ||||| |||||||||||||||  |||||||    
T  49040977 caaaggtcccaactcctttaatagttttatggtttgtttttcaacaagggtaaacgtgggaaaa--atattaaatatactaaaacatcaaatattttgga 49041074  T
Q  111 atatagttgaagttctaaaacatcaaaagaaaa 143  Q
    | |||||||||||||||||||||||||||||||    
T  49041075 acatagttgaagttctaaaacatcaaaagaaaa 49041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 49319416 - 49319344
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactt 161  Q
    |||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||||| |||||||    
T  49319416 ctaaaacatcaaaatttttagaatgaagtttaagttctaaaacatcaaaagaaaaggaatggaggaagtactt 49319344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 1352029 - 1351994
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  1352029 ctaaaacatcaaaagaaaaggaatggagggagtact 1351994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 39528993 - 39529027
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
    |||||||||||||||||||||||||||||||||||    
T  39528993 ctaaaacatcaaaagaaaaggaatggagggagtac 39529027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 18997211 - 18997244
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  18997211 ctaaaacatcaaaagaaaaggaatggagggagta 18997244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 18999750 - 18999783
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  18999750 ctaaaacatcaaaagaaaaggaatggagggagta 18999783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 29014723 - 29014690
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  29014723 ctaaaacatcaaaagaaaaggaatggagggagta 29014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 36737867 - 36737834
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  36737867 ctaaaacatcaaaagaaaaggaatggagggagta 36737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 38855561 - 38855594
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  38855561 ctaaaacatcaaaagaaaaggaatggagggagta 38855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 39518651 - 39518684
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  39518651 ctaaaacatcaaaagaaaaggaatggagggagta 39518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 41349404 - 41349371
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  41349404 ctaaaacatcaaaagaaaaggaatggagggagta 41349371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 46878980 - 46879012
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||    
T  46878980 taaaacatcaaaagaaaaggaatggagggagta 46879012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 837455 - 837370
Alignment:
Q  46 gttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacat 133  Q
    ||||| |||||  ||||||||||| |||| |||| ||| | |||||||| ||||||| |||| |||| ||||||||||||||||||||    
T  837455 gtttttcaacacaggtaaacttgaaaaaa-aatattaattatactaaaatatcaaaa-ttttagaatttagttgaagttctaaaacat 837370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 29371571 - 29371538
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||    
T  29371571 ctaaaacatcaaaagaaaatgaatggagggagta 29371538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 32677510 - 32677477
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||    
T  32677510 ctaaaacatcaaaagaaaatgaatggagggagta 32677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 39807012 - 39806979
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||| ||||||||    
T  39807012 ctaaaacatcaaaagaaaaggaatgaagggagta 39806979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 34667662 - 34667762
Alignment:
Q  52 caacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgga 151  Q
    ||||||||||||| ||||  ||| ||||  |||  | |||||| ||||||  ||||| | || ||||||||| |||||||||||||||||| | ||||||    
T  34667662 caacaagggtaaaattgaataaaaaatatcaaacattctaaaagatcaaatattttgaattaaagttgaagtcctaaaacatcaaaagaaacgaaatgga 34667761  T
Q  152 g 152  Q
    |    
T  34667762 g 34667762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 6e-70; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 46220402 - 46220257
Alignment:
Q  15 aaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  46220402 aaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatat 46220303  T
Q  115 agttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  46220302 agttgaagttctaaaacatcaaaagaaaaggaatagagggagtact 46220257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 47669263 - 47669119
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  47669263 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaaattttggaata 47669164  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  47669163 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 47669119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 10737834 - 10737978
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  10737834 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttagaata 10737933  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  10737934 tagttgaagttctaaaacattaaaagaaaaggaatgaagggagta 10737978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 4817407 - 4817269
Alignment:
Q  20 tcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttg 119  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  4817407 tcacaactaccttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaatgataaattcactaaaacatcaaaagttttggaatatagttg 4817308  T
Q  120 aagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4817307 aagttctaaaacatcaaaagaaaaggaatggagggagta 4817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 9831647 - 9831502
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  9831647 caaaggtcacaactattttaatagtttattgtgttttccaacaagggtaaacttgagaaaataataacaaattcactaaaacatcaaaagttttggaata 9831548  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  9831547 tagttgaaattctaaaacatcaaaagaaaaggaatggagggagtac 9831502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 18126994 - 18126844
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  18126994 caaaagtcacaactactt-aatagtttgttgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttagaata 18126896  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacttcata 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18126895 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtaattcata 18126844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 3384728 - 3384871
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |    
T  3384728 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttg--aaa 3384825  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 159  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||||    
T  3384826 tagttgaggttctaaaacatcaaaagaaaaagaatgaagggagtac 3384871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 4055620 - 4055484
Alignment:
Q  22 acaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaa 121  Q
    ||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  4055620 acaactactttaacagtgaattgtgttttccaataagggtaaacttgagaaaacaataattaattcactaaaacatcaaaagttttggaatatagttgaa 4055521  T
Q  122 gttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||    
T  4055520 gttctaaaacatcaaaagaaaaggaatggagggagta 4055484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 48564961 - 48564818
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  48564961 caaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaatttttggaata 48564862  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||    
T  48564861 tagttgaagttttaaaacatc-aaagaaaagtaatggagggagta 48564818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 8889581 - 8889457
Alignment:
Q  19 gtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagtt 118  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8889581 gtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagtt 8889482  T
Q  119 gaagttctaaaacatcaaaagaaaa 143  Q
    ||||||||||||||| |||| ||||    
T  8889481 gaagttctaaaacataaaaaaaaaa 8889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 7414351 - 7414208
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||  ||||    
T  7414351 caaatgtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaaaatttaaaata 7414252  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagt 157  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  7414251 tagttgaagttctaaaacatcaaaaaaaaatgaatggagggagt 7414208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 1236205 - 1236307
Alignment:
Q  56 aagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  1236205 aagggtaaacttgagaaaacaataataaattcactaaaccatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaatgaatggaggga 1236304  T
Q  156 gta 158  Q
    |||    
T  1236305 gta 1236307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 39241296 - 39241172
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaa-cttgagaaaacaataataaatttactaaaacatcaaaagttttggaat 112  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||| ||||| ||||| | |||||||||||||| ||| ||||| ||||||||||| |||    
T  39241296 caaaagtcacaactactttaatagtttatggtgtttttcaacaagagtaaaacttgatacaacaataataaattcactgaaacaacaaaagttttgaaat 39241197  T
Q  113 atagttgaagttctaaaacatcaaaa 138  Q
    ||||||||| ||||||||||| ||||    
T  39241196 atagttgaa-ttctaaaacattaaaa 39241172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 33020275 - 33020203
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactt 161  Q
    ||||||||||||||||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  33020275 ctaaaacatcaaaagttttggaaaaaagtttaagctctaaaacatcaaaagaaaaggaatggagggagtactt 33020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 1749521 - 1749600
Alignment:
Q  79 aataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  1749521 aataaattcactaaaacatcaaaagttttggtatataattaaagttctaaaacatcaaaagaaaaggaatagaggaagta 1749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 26842552 - 26842462
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatca 135  Q
    |||||||| |||||||| ||||||||| ||||  ||| ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  26842552 tgtgtttttcaacaaggataaacttgaaaaaa--atattaaatatactaaaacatcaaatattttgaaatatagttgaagttctaaaacatca 26842462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 33846820 - 33846935
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataat-aaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaa 141  Q
    ||||||||  |||||||||||||||||| ||| || ||| |||| |||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||    
T  33846820 tgtgttttttaacaagggtaaacttgaggaaaaaaaaattaaatatactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaa 33846919  T
Q  142 aaggaatggagggagta 158  Q
    ||  |||||||||||||    
T  33846920 aa-aaatggagggagta 33846935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 33947158 - 33947043
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataat-aaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaa 141  Q
    ||||||||  |||||||||||||||||| ||| || ||| |||| |||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||    
T  33947158 tgtgttttttaacaagggtaaacttgaggaaaaaaaaattaaatatactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaa 33947059  T
Q  142 aaggaatggagggagta 158  Q
    ||  |||||||||||||    
T  33947058 aa-aaatggagggagta 33947043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 37875920 - 37875849
Alignment:
Q  30 tttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaa 101  Q
    ||||||||| |  ||| |||| |||||||| ||||||||||||||||| | ||||| |||||||||||||||    
T  37875920 tttaatagtatggtgtatttttcaacaaggataaacttgagaaaacaacattaaatatactaaaacatcaaa 37875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 10737734 - 10737701
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  10737734 ctaaaacatcaaaagaaaaggaatggagggagta 10737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 46220503 - 46220536
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  46220503 ctaaaacatcaaaagaaaaggaatggagggagta 46220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 47669363 - 47669396
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  47669363 ctaaaacatcaaaagaaaaggaatggagggagta 47669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 1236103 - 1236071
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagt 157  Q
    |||||||||||||||||||||||||||||||||    
T  1236103 ctaaaacatcaaaagaaaaggaatggagggagt 1236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 158
Target Start/End: Original strand, 48565063 - 48565094
Alignment:
Q  127 aaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||    
T  48565063 aaaacatcaaaagaaaaggaatggagggagta 48565094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 49112439 - 49112535
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    |||||||| ||||||||||||| ||   ||||||||  ||||| |||||||||||||||  ||||  ||||||||| |||||    ||||||||||||||    
T  49112439 tgtgtttttcaacaagggtaaatttagaaaaacaatgttaaatatactaaaacatcaaatattttaaaatatagttaaagtt----aacatcaaaagaaa 49112534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 9831747 - 9831777
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggaggga 155  Q
    |||||||||||||||||||||||||||||||    
T  9831747 ctaaaacatcaaaagaaaaggaatggaggga 9831777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 8889687 - 8889720
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||| |||||||||||||||||||    
T  8889687 ctaaaacatcaaaataaaaggaatggagggagta 8889720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 33023428 - 33023461
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||| ||||||||||||||||||||||||||    
T  33023428 ctaaaacgtcaaaagaaaaggaatggagggagta 33023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 37875760 - 37875727
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||| |||||||||||||    
T  37875760 ctaaaacatcaaaagaaaagaaatggagggagta 37875727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 15233899 - 15233757
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  15233899 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 15233800  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggag 156  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  15233799 tagttgaagttctaaaacatcaaaagaaaaggaatagagggag 15233757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 43040982 - 43041126
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43040982 caaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataataaattcactaaaacatcaaaagttttggaata 43041081  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  43041082 tagttgaagttttaaaacatcaaaagaaaaggaatggagggagta 43041126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 35793040 - 35793183
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  35793040 caaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttga-aaaacaataataaattctctaaaacatcaaaagttttggaata 35793138  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  35793139 tagttgaagttctaaaacatcaaaagaaaaagaatggagggagta 35793183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 41252559 - 41252415
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  41252559 caaatgtcacaactactttaatagtttattgtattttccaacaaggataaacttgagaacacaataataaattcactaaaacatcaaaagttttggaata 41252460  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    || ||||||||||||||||| ||||||||||||||||||||||||    
T  41252459 tatttgaagttctaaaacataaaaagaaaaggaatggagggagta 41252415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 31296221 - 31296083
Alignment:
Q  20 tcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttg 119  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  31296221 tcacaactactttaatagtttattgtgtttttcaacaaaggtaaatttgagaaaacaataataaattcactaaaacatcaaaagttttagaatatagttg 31296122  T
Q  120 aagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  31296121 aagttctaaaacatcaaaagaaaaagaatggaaggagta 31296083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 44104683 - 44104836
Alignment:
Q  15 aaaggtcacaactactttaatagtttattgtgttttccaacaa-------gggtaaacttgagaaaacaataataaatttactaaaacatcaaaagtttt 107  Q
    ||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  44104683 aaaggtcacaactaccttaatagtttattgtgttttccaacaatttataagggtaaacttgagaaaataataataaattcactaaaacatcaaaagtttt 44104782  T
Q  108 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactt 161  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44104783 gaaatatagttgaagttctaaaacatcaaaagaaaaggaacggagggagtactt 44104836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 41643038 - 41642891
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaa-- 111  Q
    ||||||||||||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  41643038 caaaggtcacaactactttaatagtttatggtgttttccagaaaaggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 41642939  T
Q  112 tatagttgaagttct-aaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||||    
T  41642938 tatagttgaaattctaaaaacatcaaaagaaaagaaatggagggagta 41642891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 31903513 - 31903641
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||    
T  31903513 caaaggtcacaactactttaatagtttatggtgttttccaataagggtaaact-gataaaacaataataaatttactaaaacatcaaaaaatttggaata 31903611  T
Q  114 tagttgaagttctaaaacatcaaaagaaaa 143  Q
    || |||||||||||||||||||||| ||||    
T  31903612 tatttgaagttctaaaacatcaaaaaaaaa 31903641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 10118660 - 10118729
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||    
T  10118660 ctaaaacatcaaaagttttggaataaagtttaagctctaaaatatcaaaagaaaaggaatggagggagta 10118729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 21727809 - 21727684
Alignment:
Q  21 cacaactactttaatagttt-attgtgttttc--caacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagt 117  Q
    ||||||| |||||||||||| ||||||||||   ||||||||||||| ||| | ||| |||| ||  | ||| |||||||||||  ||||| ||||||||    
T  21727809 cacaactcctttaatagttttattgtgtttttttcaacaagggtaaatttggggaaaaaatattagttataccaaaacatcaaatattttgaaatatagt 21727710  T
Q  118 tgaagttctaaaacatcaaaagaaaa 143  Q
    ||||||||||||||||||||||||||    
T  21727709 tgaagttctaaaacatcaaaagaaaa 21727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 43040882 - 43040847
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  43040882 ctaaaacatcaaaagaaaaggaatggagggagtact 43040847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 10112372 - 10112339
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  10112372 ctaaaacatcaaaagaaaaggaatggagggagta 10112339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 15233999 - 15234032
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||    
T  15233999 ctaaaacatcaaaagaaaaggaatggagggagta 15234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 36963200 - 36963131
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||  ||||| |||| |||| || ||||||||||| |||||||||||||| ||| |||||    
T  36963200 ctaaaacatcaaattttttgaaataaagtttaaattctaaaacattaaaagaaaaggaatagagcgagta 36963131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 44104578 - 44104546
Alignment:
Q  126 taaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||    
T  44104578 taaaacatcaaaagaaaaggaatggagggagta 44104546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 45590886 - 45590742
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||    
T  45590886 caaaggtcacaactactttaatagtttattgtgttttccaacaaaggtaaacttgataaaacaataatgaattcactaaaacatcaaaagttttagaata 45590787  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  45590786 tagttgaagttctaaaacatcaaaagaaaatgaatggagggagta 45590742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 8955909 - 8956053
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||    
T  8955909 caaaggtcacaactactttaataatttattgtgttttccaataagggtaaacttgataaaacaataacaaattcactaaaacatcaaaagttttgtaata 8956008  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  8956009 tagttgaagttctaaaacatcaaaaaaaaaggaatggagggagta 8956053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 34334476 - 34334342
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  34334476 caaagatcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaagacaataataaattcactaaagcatcaaaagttttggaata 34334377  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaat 148  Q
    |||||||||||||||||||||||||||||||||||    
T  34334376 tagttgaagttctaaaacatcaaaagaaaaggaat 34334342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 33288538 - 33288682
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    |||| |||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33288538 caaatgtcacaactactttatcagtatattgtgttttccaacatgggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaata 33288637  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    || |||||||||||||| ||||||||||||| |||||||||||||    
T  33288638 taattgaagttctaaaatatcaaaagaaaagaaatggagggagta 33288682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 49162245 - 49162108
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  49162245 caaaggttacaactactttaatagtttatggtgttttccaacaagg-taaaattgagaaaacaataataaattcactaaaacatcaaaaattttggaata 49162147  T
Q  114 tagttgaagttctaaaacatcaaaagaaaaggaatggag 152  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  49162146 tagttgaagttctgaaacatcaaaagaaaatgaatggag 49162108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 18835851 - 18835703
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattt--actaaaacatcaaaagttttggaa 111  Q
    |||| ||||||||||||||||||||||||  ||||||| ||||||| |||| ||||||||||||||||| || |  ||||||||||| ||||||||||||    
T  18835851 caaatgtcacaactactttaatagtttatgatgttttctaacaaggataaatttgagaaaacaataatatatattcactaaaacatcgaaagttttggaa 18835752  T
Q  112 tatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 160  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  18835751 tatagttgaagttctaaaacatcaaaagaaaataaatgaagggagtact 18835703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 30469353 - 30469445
Alignment:
Q  66 ttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30469353 ttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgaagggagta 30469445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 39482002 - 39481906
Alignment:
Q  59 ggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 155  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  39482002 ggtaaacctgagaaaacaataataaatttactaaaacatcaaaagttttggaaaatagttgaagttctaaaacatcaaaagaaaagaaatggaggga 39481906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 50774191 - 50774325
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaa-----catcaaaagttttg 108  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||      |||||||||||||    
T  50774191 caaaagtcacgactaatttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaatactgtatcaaaagttttg 50774290  T
Q  109 gaatatagttgaagttctaaaacatcaaaagaaaa 143  Q
     ||||||||| ||||||||||||||||||| ||||    
T  50774291 aaatatagttaaagttctaaaacatcaaaaaaaaa 50774325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 36971192 - 36971115
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaa 92  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  36971192 caaaggtcacaactattttaatagtttattgtgttttccaacaa-ggtaaacttcagaaaacaataataaattcactaa 36971115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 19256255 - 19256186
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  19256255 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagta 19256186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 26025685 - 26025784
Alignment:
Q  43 tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 142  Q
    |||||||| ||||||||||||||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||||||||| ||||||||||||||||||    
T  26025685 tgtgtttttcaacaagggtaaacttgggaaaa-aatattaaatatactaaaatgtcaaatattttggaatatagttgaagtcctaaaacatcaaaagaaa 26025783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 36016329 - 36016279
Alignment:
Q  108 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36016329 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 36016279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 36968407 - 36968353
Alignment:
Q  89 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36968407 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaaaaaaa 36968353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 33109031 - 33109163
Alignment:
Q  14 caaaggtcacaactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttgga 110  Q
    ||||||||||||||  ||||||||||| ||  ||||||||  ||||||| ||||||| |||||| |||| ||||| ||||||||||||||   ||||  |    
T  33109031 caaaggtcacaactcatttaatagttttatggtgtgttttttaacaaggataaacttaagaaaaaaatattaaatatactaaaacatcaattattttaaa 33109130  T
Q  111 atatagttgaagttctaaaacatcaaaagaaaa 143  Q
    ||||||||||||| ||||||||| |||||||||    
T  33109131 atatagttgaagtcctaaaacattaaaagaaaa 33109163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 158
Target Start/End: Original strand, 19257103 - 19257137
Alignment:
Q  124 tctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||    
T  19257103 tctaaaacatcaaaagaaaaggaatggagggagta 19257137  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 8955809 - 8955779
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggaggga 155  Q
    |||||||||||||||||||||||||||||||    
T  8955809 ctaaaacatcaaaagaaaaggaatggaggga 8955779  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 45590986 - 45591019
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||    
T  45590986 ctaaaacatcaaaagaaaatgaatggagggagta 45591019  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 49162332 - 49162365
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagta 158  Q
    |||||||||||||||||| |||||||||||||||    
T  49162332 ctaaaacatcaaaagaaagggaatggagggagta 49162365  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 157
Target Start/End: Original strand, 39482106 - 39482138
Alignment:
Q  125 ctaaaacatcaaaagaaaaggaatggagggagt 157  Q
    |||||||||||||||||||| ||||||||||||    
T  39482106 ctaaaacatcaaaagaaaagaaatggagggagt 39482138  T

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Target: scaffold0103 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 44764 - 44619
Alignment:
Q  14 caaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  44764 caaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcactaaaacctcaaaagttttggaata 44665  T
Q  114 tagttgaagttctaaaacatca-aaagaaaaggaatggagggagta 158  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||    
T  44664 tagttgaagttctcaaacatcagaaagaaaaggaatgaagggagta 44619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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