View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14543_low_2 (Length: 497)
Name: NF14543_low_2
Description: NF14543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14543_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 466; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 1 - 482
Target Start/End: Complemental strand, 33033109 - 33032628
Alignment:
| Q |
1 |
tagcataggatgattatgtaattaaatcaaaaaacatggtacataaatgtgtatctatgccaagactaattgtctttcacaaaggagacaaatcatagga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33033109 |
tagcataggatgattatgtaattaaatcaaaaaacatggtaaataaatgtgtatctatgccaagactaattgtctttcacaaaggagacaaatcatagga |
33033010 |
T |
|
| Q |
101 |
tgattatgttcactaacacaataatttcttgttttcatgatatcttcatatgagctcataggttatcctaattgcaggacaaaataaaattttcactgct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33033009 |
tgattatgttcactaacacaataatttcttgttttcatgatatcttcatatgagctcataggttatcctaattgcaggacaaaataaaattttcactgct |
33032910 |
T |
|
| Q |
201 |
aaagcatgaaacaaaacattgatcttgaagtagaagcttgtgcagaatatgaatctgaagttacaagccaacttgattctaatgtatcaactcaagaaac |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
33032909 |
aaagcatgaaacaaaacattgatcttgaagtagaagcttgtgcagaatatgaatctgaagttacaagccaagttgattctaatgtatcaactcaagaaac |
33032810 |
T |
|
| Q |
301 |
cttttacaacatcacaaatcctaattcatatgatatatctcttgacttaagtctaaatttcaagaacagtgagataccaacaacaagagattcaaattca |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33032809 |
cttttacaacatcacaaatcctaattcatatgatatatctcttgacctaagtctaaatttcaagaacagtgagataccaacaacaagagattcaaattca |
33032710 |
T |
|
| Q |
401 |
ataggattctcactttcaagcacttctgagagcagcaatgaacctgcaacagcaacaattccaagagttttctcatgcaatt |
482 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33032709 |
ataggattctcactttcaagcacttctgagagcagtaatgaacctgcaacagcaacaattccaagagttttctcatgcaatt |
33032628 |
T |
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