View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14546_high_29 (Length: 211)
Name: NF14546_high_29
Description: NF14546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14546_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 45772407 - 45772583
Alignment:
| Q |
9 |
ccaagctatcaattcggtttaacaaatcacttgtaaaacaagcaagggtctcctttcttcttctccaaaagccattgtcaacaagtgtttttgatcacgt |
108 |
Q |
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| T |
45772407 |
ccaagctatcaattcggtttaacaaatcacttgtaaaacaagcaagggtctcctttcttcttctccaaaagccattgtcaacaagtgtttttgatcacgt |
45772506 |
T |
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| Q |
109 |
ccaacccgcattcatcctcaatgtaattctggaagnnnnnnnntggttgcgaatgcgctagaatacataaagattag |
185 |
Q |
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| T |
45772507 |
ccaacccgcattcatcctcaatgtaattctggaaggaaaaaaatggttgcgaatgcgctagaatacataaagattag |
45772583 |
T |
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