View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14547_low_5 (Length: 208)
Name: NF14547_low_5
Description: NF14547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14547_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 36995167 - 36995336
Alignment:
| Q |
16 |
aatacttttacacgtgtatgctcgatgtctcttgttggttagtaacttgacacgaggtagaggtttaagatgtaaattaggtaaacttaggtattaagta |
115 |
Q |
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| T |
36995167 |
aatacttttacacgtgtatgctcgatgtctcttgttggatagtaacttgacacgaggtagaggtttaagatgtaaattaggtaaacttaggtattaagta |
36995266 |
T |
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| Q |
116 |
ttttaattaaagttgggaagtgttatcggatgtatttggtact----ctcttccattttaaatagtttct |
181 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36995267 |
ttttaattaaagttgggaagtgttatcggatgtatttggtactctagctcttccattttaaatagtttct |
36995336 |
T |
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