View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14550_low_1 (Length: 296)
Name: NF14550_low_1
Description: NF14550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14550_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 28 - 279
Target Start/End: Original strand, 7108507 - 7108770
Alignment:
| Q |
28 |
actccaaatgaagttcctaatgcttctctccaaatcttttaacaatgaaaatggcaaaccatataagaacaaattgtgtatcagtattccttgaatcaat |
127 |
Q |
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| T |
7108507 |
actccaaatgaagttcctaatgcttctctccaaatcttttaacaatgaaaatagcaaagcatataaggacaaattgtgtatcagtattccttgaatcaat |
7108606 |
T |
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| Q |
128 |
gagattactatg----------------gttttctggaccccttgataaggtctagcttaccttcatccaccaatctagaaatacttctgctcatcacct |
211 |
Q |
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| T |
7108607 |
gagattactatggttttctggacatatggttttctggaccccttgataaggtctagcttaccttcatccaccaatctagaaatacctctgctcatcacct |
7108706 |
T |
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| Q |
212 |
ctttggcaaaacataaaaggagaggagagatagatacagtattcctgcctcacccctctcttacaatg |
279 |
Q |
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| T |
7108707 |
ctttggcaaaacataaaaggagaggag----agatacagtattcctgcctcacccctctcttacaatg |
7108770 |
T |
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