View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14552_high_5 (Length: 226)
Name: NF14552_high_5
Description: NF14552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14552_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 24366493 - 24366706
Alignment:
| Q |
1 |
tcactaccaaattctaatattgttaagacatgaaccataatattctaaatttgtcatgttaaaattcaaatttagagatgatcaagtaaatgacaaaa-a |
99 |
Q |
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| T |
24366493 |
tcactaccaaattctaatattgttaagacatgaaccataatattctaaatttgtcatgttaaagttcaaatttagagatgatcaagtaaatgacaaaaaa |
24366592 |
T |
|
| Q |
100 |
attataagcagcagagcgaatcggatatgtatggacgaatatattcagctggtcctattctatgtgaacaaaactgatatggacagcatgaaataacaaa |
199 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
24366593 |
attataagcagcagagcaaatcggatatgtatggacgaatatattcagctggtcctattctatgtgaacaaatctgatatggacagcatgaaataacaaa |
24366692 |
T |
|
| Q |
200 |
atgaaattgggttc |
213 |
Q |
| |
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|||||||||||||| |
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| T |
24366693 |
atgaaattgggttc |
24366706 |
T |
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