View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14553_low_2 (Length: 450)
Name: NF14553_low_2
Description: NF14553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14553_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 14 - 428
Target Start/End: Original strand, 2064709 - 2065123
Alignment:
| Q |
14 |
gcaacagagaggaagagaacggaggaggtcggagttacggaactttgataaacagacagcgcaatcagcggcggtgacggcggaggaacgacgggagatg |
113 |
Q |
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| T |
2064709 |
gcaacagagaggaagagaacggaggaggtcggagttacggaactttgataaacagacagcgcagtcagcggcggtgacggcggaggaacgacgggagatg |
2064808 |
T |
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| Q |
114 |
gatgagaatgtgaagagagggagtgagtcgatgacggagggaggtgttgtttctggagagatacgacggctgtgagtgtgaggaggaggttcggtggttg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2064809 |
gatgagaatgtgaagagagggagtgagtcgatgacggagggaggtgttgtttctggagagatacgacggctgtgagtgtgaggaggaggttcggtggttg |
2064908 |
T |
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| Q |
214 |
ttggagatggattacggcggagacggtgacagttgaggtggcggaggaggaagcagattagaagagaaacgatgacggtgacggcgaggattgttataat |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2064909 |
ttggagatggattacggcggagacggtgacagttgaggtggcggaggaggaagcagattagaagagaaacgatgacggtgacggcgaggattgttataat |
2065008 |
T |
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| Q |
314 |
gatgagaatgctagggcttatgttttgtaacggagatgaacggtgtggtgacggtggtgtaaatgtagtatccataacgacgacgtttttgtgaagagaa |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2065009 |
gatgagaatgctagggcttatgttttgtaacggagatgaacggtgtggtgacggtggtgtaaatgtagtatccataacgacgacgtttttgtgaagagaa |
2065108 |
T |
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| Q |
414 |
ggtctagagtattaa |
428 |
Q |
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||||||||||||||| |
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| T |
2065109 |
ggtctagagtattaa |
2065123 |
T |
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