View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14554_high_10 (Length: 259)
Name: NF14554_high_10
Description: NF14554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14554_high_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 9731722 - 9731980
Alignment:
| Q |
1 |
cagaaacgaaaattatacaaacaaaacgcgaataccttaggaaaacaaaagcatctccggccaccaatcttttggatgcgacaaatgtactccagccggt |
100 |
Q |
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| T |
9731722 |
cagaaacgaaaattatacaaacaaaacccgaataccttaggaaaacaaaagcatctccggccaccaatcttttggatgcgacaaatgtactccagccggt |
9731821 |
T |
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| Q |
101 |
tgtaagcaagtgcctcctcggttgacctgatcacagtagtggaagggatataagaaccatgtcgcttccatttctcattcaatgcaaatcatagaattca |
200 |
Q |
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| T |
9731822 |
tgtaagcaagtgcctcctcggttgacctgatcacagtagtggaagggatataagaaccatgtcacttccatttctcattcaatgcaaatcatagaattca |
9731921 |
T |
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| Q |
201 |
ttcattcaagaatttgaatatgacactaaaattagagaatgaaaataagactacaaatt |
259 |
Q |
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| T |
9731922 |
ttcattcaagaatttgaatatgacactaaaattagagaatgaaaataagactacaaatt |
9731980 |
T |
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