View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14555_high_7 (Length: 226)
Name: NF14555_high_7
Description: NF14555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14555_high_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 17602358 - 17602577
Alignment:
| Q |
6 |
aataaccaaggtcagaattaattcaaccaatatcttaataaataaagtttcaaagcgacgcaatttcgataatttaaaatactagtttcgtcaatataaa |
105 |
Q |
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| T |
17602358 |
aataaccaaggtcagaattaattcaaccaatatcttaataaataaagtttcaaagcgacgcaatttcgataatttaaaatactagtttcgtcaatataaa |
17602457 |
T |
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| Q |
106 |
aataaagagacatcctttnnnnnnnnnnntacaaagtaaactctcatgatttcatcaaacgctcaatcgacctcaaaattaaaaccgtatacatgagttc |
205 |
Q |
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| T |
17602458 |
aataaagagacatccttt-aaaaaaaaaatacaaagtaaactcttatgatttcatcaaacgctcaatcgacctcaaaattaaaaccgtatacatgagttc |
17602556 |
T |
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| Q |
206 |
tctatttaatcataaggtatt |
226 |
Q |
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| T |
17602557 |
tctatttaatcataaggtatt |
17602577 |
T |
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