View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14556_high_15 (Length: 253)
Name: NF14556_high_15
Description: NF14556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14556_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 26672540 - 26672331
Alignment:
| Q |
17 |
cagagacagagctgaacaaaacacagtgtcggaaggaagaaggaatctaaacatccatcattttctcgtgattccctaacccatctacattctcttctct |
116 |
Q |
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| T |
26672540 |
cagagacagagctgaacaaaacacagtgtcggaaggaagaaggaatctaaacatccatcattttctcgtgattccctaacccatctacattctcttctct |
26672441 |
T |
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| Q |
117 |
tctttttattatccttcctcatacacacgcgccattctcattccacgcgccttctcttctttctttcctagctagggtttccttctctcatcatcgcaat |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
26672440 |
tctttttattatccttcctcatacacacgcgccattctcattccacgcgccttctcttctttctttc----ctagggtttccttctctcatcatcgcaat |
26672345 |
T |
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| Q |
217 |
gtccagccccatcg |
230 |
Q |
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|||||||||||||| |
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| T |
26672344 |
gtccagccccatcg |
26672331 |
T |
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