View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14556_low_10 (Length: 399)

Name: NF14556_low_10
Description: NF14556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14556_low_10
NF14556_low_10
[»] chr1 (48 HSPs)
chr1 (142-339)||(750209-750406)
chr1 (140-335)||(5489773-5489968)
chr1 (143-335)||(43570994-43571186)
chr1 (141-340)||(48498865-48499064)
chr1 (145-340)||(7447828-7448022)
chr1 (140-337)||(24769405-24769602)
chr1 (143-336)||(50448167-50448360)
chr1 (145-336)||(4401329-4401521)
chr1 (140-335)||(23989431-23989627)
chr1 (143-334)||(37814778-37814969)
chr1 (145-336)||(2497469-2497660)
chr1 (185-336)||(4888085-4888235)
chr1 (143-242)||(48119628-48119727)
chr1 (141-242)||(44112675-44112776)
chr1 (143-242)||(35003294-35003393)
chr1 (143-242)||(38335918-38336017)
chr1 (142-242)||(41065152-41065252)
chr1 (143-242)||(46168383-46168482)
chr1 (142-236)||(38113202-38113296)
chr1 (141-242)||(45639733-45639834)
chr1 (142-242)||(45427746-45427846)
chr1 (263-340)||(35003414-35003491)
chr1 (247-309)||(32813273-32813336)
chr1 (263-338)||(44112797-44112872)
chr1 (142-242)||(45705824-45705924)
chr1 (263-335)||(45705945-45706017)
chr1 (143-242)||(35000114-35000213)
chr1 (263-329)||(48119748-48119814)
chr1 (257-305)||(26440764-26440813)
chr1 (246-309)||(9474886-9474950)
chr1 (263-335)||(35000021-35000093)
chr1 (263-339)||(38113099-38113175)
chr1 (263-335)||(45639640-45639712)
chr1 (247-309)||(2581941-2582004)
chr1 (141-200)||(14427345-14427404)
chr1 (181-224)||(26585500-26585543)
chr1 (263-338)||(26585582-26585657)
chr1 (246-308)||(41758832-41758895)
chr1 (263-314)||(46168503-46168554)
chr1 (247-309)||(50591011-50591074)
chr1 (268-309)||(3000345-3000387)
chr1 (268-309)||(38595180-38595222)
chr1 (266-336)||(45427652-45427722)
chr1 (268-309)||(51898715-51898757)
chr1 (247-311)||(13414785-13414850)
chr1 (263-336)||(41065271-41065344)
chr1 (266-309)||(37649224-37649268)
chr1 (246-309)||(45044570-45044634)
[»] chr3 (46 HSPs)
chr3 (140-336)||(46941050-46941246)
chr3 (141-335)||(40808863-40809057)
chr3 (139-344)||(54237092-54237297)
chr3 (140-335)||(24688310-24688505)
chr3 (144-338)||(42394324-42394518)
chr3 (141-338)||(47190931-47191127)
chr3 (140-337)||(54246054-54246251)
chr3 (142-336)||(25413680-25413874)
chr3 (143-338)||(36150130-36150325)
chr3 (144-335)||(40480750-40480941)
chr3 (145-335)||(53581766-53581956)
chr3 (143-335)||(42100688-42100880)
chr3 (143-335)||(45126836-45127028)
chr3 (185-336)||(52629870-52630021)
chr3 (141-337)||(53273599-53273786)
chr3 (145-337)||(1078229-1078412)
chr3 (145-335)||(27748565-27748746)
chr3 (140-338)||(11064627-11064823)
chr3 (178-284)||(51249343-51249449)
chr3 (140-335)||(9434121-9434316)
chr3 (140-242)||(4190266-4190368)
chr3 (141-242)||(10457893-10457994)
chr3 (142-231)||(25996267-25996356)
chr3 (140-245)||(29558232-29558337)
chr3 (247-309)||(26141543-26141606)
chr3 (245-338)||(29556864-29556956)
chr3 (141-242)||(52627978-52628079)
chr3 (257-340)||(19148882-19148965)
chr3 (143-242)||(34791829-34791928)
chr3 (297-339)||(40488174-40488216)
chr3 (253-309)||(20764932-20764989)
chr3 (263-340)||(51757713-51757789)
chr3 (263-311)||(4190197-4190245)
chr3 (247-309)||(17470431-17470494)
chr3 (247-309)||(33644226-33644289)
chr3 (263-334)||(34791949-34792019)
chr3 (247-309)||(49607440-49607503)
chr3 (247-305)||(51419371-51419430)
chr3 (247-309)||(53982037-53982100)
chr3 (273-328)||(54429180-54429235)
chr3 (263-337)||(10457798-10457872)
chr3 (268-309)||(11095385-11095427)
chr3 (247-309)||(45058564-45058626)
chr3 (268-309)||(52629326-52629368)
chr3 (254-305)||(11347940-11347992)
chr3 (268-307)||(31456717-31456757)
[»] chr4 (58 HSPs)
chr4 (141-339)||(1771170-1771368)
chr4 (143-338)||(27550309-27550504)
chr4 (141-337)||(28982728-28982924)
chr4 (141-335)||(33703139-33703333)
chr4 (140-336)||(23035977-23036173)
chr4 (143-335)||(35017733-35017924)
chr4 (141-335)||(25051691-25051885)
chr4 (132-347)||(55966242-55966457)
chr4 (145-335)||(43514594-43514784)
chr4 (145-335)||(27893750-27893940)
chr4 (146-335)||(23204686-23204875)
chr4 (140-337)||(27864561-27864758)
chr4 (145-335)||(43949709-43949900)
chr4 (143-336)||(27316619-27316813)
chr4 (145-338)||(43735744-43735937)
chr4 (143-335)||(12496956-12497148)
chr4 (145-336)||(31680904-31681095)
chr4 (145-314)||(39631102-39631272)
chr4 (140-340)||(28988470-28988669)
chr4 (18-124)||(5664388-5664494)
chr4 (185-335)||(51512173-51512323)
chr4 (142-329)||(48463364-48463551)
chr4 (142-337)||(21687005-21687200)
chr4 (143-329)||(41847971-41848157)
chr4 (143-329)||(45490227-45490413)
chr4 (144-304)||(41878407-41878567)
chr4 (145-308)||(41327478-41327641)
chr4 (197-336)||(56215805-56215943)
chr4 (143-242)||(17619153-17619252)
chr4 (196-295)||(46412417-46412516)
chr4 (141-242)||(711958-712059)
chr4 (143-242)||(55272377-55272476)
chr4 (145-225)||(3756264-3756344)
chr4 (142-242)||(32728356-32728456)
chr4 (142-242)||(48435580-48435680)
chr4 (140-231)||(35037002-35037093)
chr4 (141-223)||(960890-960972)
chr4 (263-336)||(19880074-19880147)
chr4 (263-335)||(55272284-55272356)
chr4 (335-382)||(5664341-5664388)
chr4 (263-339)||(35037125-35037200)
chr4 (263-313)||(712080-712130)
chr4 (263-337)||(17619058-17619132)
chr4 (176-242)||(19879987-19880053)
chr4 (263-345)||(46827604-46827686)
chr4 (263-336)||(3756159-3756232)
chr4 (140-225)||(46827724-46827809)
chr4 (142-223)||(49229684-49229765)
chr4 (263-335)||(48435487-48435559)
chr4 (266-309)||(50526201-50526245)
chr4 (254-309)||(55475217-55475273)
chr4 (247-309)||(17983754-17983817)
chr4 (247-309)||(29977911-29977974)
chr4 (247-309)||(48183060-48183123)
chr4 (247-309)||(50052439-50052502)
chr4 (263-311)||(960802-960850)
chr4 (247-306)||(29589751-29589811)
chr4 (278-338)||(32728492-32728552)
[»] chr8 (37 HSPs)
chr8 (140-336)||(36743390-36743586)
chr8 (143-330)||(29705362-29705549)
chr8 (143-336)||(11582766-11582959)
chr8 (140-337)||(30660648-30660845)
chr8 (143-331)||(2165875-2166063)
chr8 (142-334)||(42197344-42197536)
chr8 (145-340)||(30912465-30912660)
chr8 (142-335)||(2546995-2547188)
chr8 (144-336)||(45397317-45397508)
chr8 (140-335)||(42295192-42295386)
chr8 (145-329)||(29800864-29801048)
chr8 (145-339)||(20148762-20148956)
chr8 (142-335)||(31384663-31384856)
chr8 (140-312)||(5754900-5755072)
chr8 (145-334)||(26125637-26125825)
chr8 (185-335)||(9241594-9241744)
chr8 (143-338)||(1375542-1375737)
chr8 (178-335)||(3743806-3743963)
chr8 (142-312)||(40528565-40528736)
chr8 (145-239)||(42699259-42699353)
chr8 (140-242)||(35181513-35181615)
chr8 (141-242)||(34304786-34304887)
chr8 (142-242)||(18066719-18066819)
chr8 (142-236)||(16603633-16603727)
chr8 (140-242)||(33629994-33630096)
chr8 (263-337)||(34304908-34304981)
chr8 (263-335)||(10678060-10678132)
chr8 (144-237)||(16358839-16358933)
chr8 (185-242)||(10678153-10678210)
chr8 (263-312)||(35181636-35181685)
chr8 (263-335)||(33629901-33629973)
chr8 (247-309)||(15048193-15048255)
chr8 (247-309)||(15197359-15197422)
chr8 (247-309)||(16383403-16383466)
chr8 (268-309)||(5957856-5957898)
chr8 (268-309)||(37038505-37038547)
chr8 (247-311)||(16056412-16056477)
[»] chr6 (29 HSPs)
chr6 (142-337)||(21279928-21280123)
chr6 (142-337)||(9698239-9698434)
chr6 (140-339)||(26669913-26670112)
chr6 (145-335)||(30735984-30736174)
chr6 (140-337)||(7273241-7273438)
chr6 (145-335)||(24203895-24204085)
chr6 (140-349)||(3213397-3213606)
chr6 (140-345)||(7367546-7367751)
chr6 (140-329)||(7292744-7292933)
chr6 (143-334)||(13743130-13743321)
chr6 (143-334)||(13748630-13748821)
chr6 (140-337)||(26466796-26466993)
chr6 (143-340)||(30014343-30014540)
chr6 (142-336)||(21293584-21293778)
chr6 (145-242)||(27441544-27441641)
chr6 (141-242)||(33242401-33242502)
chr6 (143-242)||(33253913-33254012)
chr6 (142-220)||(31109245-31109323)
chr6 (263-335)||(33242523-33242595)
chr6 (263-337)||(27441662-27441736)
chr6 (247-309)||(22880669-22880732)
chr6 (263-340)||(31109125-31109202)
chr6 (263-336)||(33254034-33254107)
chr6 (247-309)||(4231574-4231637)
chr6 (247-309)||(15508035-15508098)
chr6 (247-309)||(15990053-15990116)
chr6 (247-309)||(30341371-30341434)
chr6 (247-309)||(31976274-31976337)
chr6 (247-309)||(32869704-32869767)
[»] scaffold0119 (1 HSPs)
scaffold0119 (140-339)||(682-881)
[»] chr2 (53 HSPs)
chr2 (142-337)||(30838631-30838826)
chr2 (144-338)||(19047158-19047352)
chr2 (143-335)||(1750414-1750606)
chr2 (140-336)||(4764633-4764829)
chr2 (145-341)||(43490303-43490499)
chr2 (140-336)||(12302160-12302356)
chr2 (143-335)||(16096747-16096940)
chr2 (141-335)||(43335671-43335865)
chr2 (185-334)||(42849768-42849916)
chr2 (144-338)||(34817681-34817875)
chr2 (143-302)||(13780676-13780835)
chr2 (142-330)||(42026766-42026956)
chr2 (181-336)||(39149201-39149354)
chr2 (145-284)||(8896542-8896681)
chr2 (140-242)||(43114554-43114656)
chr2 (145-222)||(33229303-33229381)
chr2 (145-242)||(11825655-11825752)
chr2 (141-242)||(16803966-16804067)
chr2 (141-242)||(16843248-16843349)
chr2 (139-344)||(34895640-34895845)
chr2 (145-242)||(41281975-41282072)
chr2 (143-242)||(12415461-12415560)
chr2 (143-242)||(12427521-12427620)
chr2 (142-236)||(18491704-18491798)
chr2 (141-242)||(966835-966936)
chr2 (247-309)||(40613913-40613976)
chr2 (263-340)||(18491825-18491902)
chr2 (263-340)||(41281877-41281954)
chr2 (263-339)||(6518398-6518474)
chr2 (145-225)||(6518487-6518566)
chr2 (263-335)||(11825562-11825634)
chr2 (271-335)||(12415368-12415432)
chr2 (271-335)||(12427428-12427492)
chr2 (263-339)||(12531567-12531643)
chr2 (181-242)||(4451951-4452012)
chr2 (263-340)||(43114677-43114754)
chr2 (263-335)||(966742-966814)
chr2 (145-225)||(4299438-4299518)
chr2 (253-308)||(38273159-38273215)
chr2 (145-232)||(7070418-7070505)
chr2 (142-225)||(14285675-14285758)
chr2 (247-308)||(7465746-7465808)
chr2 (263-335)||(16804088-16804160)
chr2 (263-335)||(16843370-16843442)
chr2 (246-309)||(17820014-17820078)
chr2 (289-337)||(29739358-29739406)
chr2 (247-309)||(2997498-2997561)
chr2 (247-309)||(28863481-28863544)
chr2 (247-309)||(42257219-42257282)
chr2 (268-309)||(9058506-9058548)
chr2 (263-312)||(4299351-4299400)
chr2 (268-308)||(17473047-17473088)
chr2 (268-311)||(27864728-27864772)
[»] scaffold0038 (1 HSPs)
scaffold0038 (144-338)||(112656-112850)
[»] chr5 (28 HSPs)
chr5 (141-335)||(18033980-18034174)
chr5 (143-336)||(2614556-2614749)
chr5 (141-341)||(33801467-33801667)
chr5 (143-335)||(41334571-41334763)
chr5 (143-310)||(22512305-22512472)
chr5 (140-337)||(7617130-7617327)
chr5 (140-336)||(5256992-5257188)
chr5 (141-329)||(38470577-38470765)
chr5 (145-337)||(25914902-25915085)
chr5 (190-295)||(39122381-39122486)
chr5 (230-338)||(39122261-39122369)
chr5 (143-215)||(33855071-33855143)
chr5 (143-242)||(32473395-32473494)
chr5 (142-242)||(17208073-17208173)
chr5 (140-242)||(30622720-30622821)
chr5 (246-309)||(28177801-28177865)
chr5 (263-335)||(30622627-30622699)
chr5 (263-334)||(32473303-32473374)
chr5 (246-309)||(6679724-6679788)
chr5 (247-309)||(2252179-2252242)
chr5 (247-309)||(3921276-3921339)
chr5 (247-309)||(18520895-18520958)
chr5 (247-309)||(26720542-26720605)
chr5 (247-309)||(26990291-26990354)
chr5 (268-309)||(2740300-2740342)
chr5 (268-309)||(42414334-42414376)
chr5 (247-292)||(15409621-15409666)
chr5 (263-332)||(17208194-17208263)
[»] chr7 (41 HSPs)
chr7 (143-340)||(5810827-5811024)
chr7 (143-336)||(24000919-24001112)
chr7 (143-335)||(42538339-42538531)
chr7 (169-335)||(32029725-32029891)
chr7 (140-329)||(5015392-5015581)
chr7 (142-339)||(35069720-35069917)
chr7 (143-336)||(42972852-42973045)
chr7 (145-338)||(16180262-16180454)
chr7 (145-336)||(44416841-44417032)
chr7 (145-335)||(43343532-43343722)
chr7 (145-339)||(44326180-44326374)
chr7 (146-335)||(26898310-26898499)
chr7 (141-335)||(41861672-41861868)
chr7 (159-332)||(27393171-27393344)
chr7 (173-314)||(38160508-38160649)
chr7 (145-335)||(10573751-10573941)
chr7 (145-336)||(4638106-4638297)
chr7 (143-337)||(45326020-45326214)
chr7 (142-337)||(9216301-9216495)
chr7 (142-310)||(43317442-43317610)
chr7 (142-310)||(5194164-5194332)
chr7 (142-304)||(24280535-24280697)
chr7 (227-339)||(47279628-47279740)
chr7 (143-242)||(31513287-31513386)
chr7 (140-231)||(40236916-40237007)
chr7 (144-242)||(31408634-31408732)
chr7 (263-336)||(40237039-40237112)
chr7 (140-242)||(33384867-33384970)
chr7 (247-309)||(46374813-46374876)
chr7 (140-242)||(27535232-27535334)
chr7 (263-339)||(31408537-31408613)
chr7 (143-210)||(39998408-39998475)
chr7 (244-309)||(32564434-32564500)
chr7 (247-309)||(35522902-35522965)
chr7 (247-309)||(36361924-36361987)
chr7 (263-313)||(27535161-27535211)
chr7 (247-311)||(38267064-38267129)
chr7 (263-339)||(31513407-31513483)
chr7 (263-339)||(33384991-33385067)
chr7 (246-309)||(35137559-35137623)
chr7 (266-309)||(46033831-46033875)
[»] scaffold0187 (2 HSPs)
scaffold0187 (142-335)||(14097-14289)
scaffold0187 (142-335)||(24425-24617)
[»] scaffold0385 (1 HSPs)
scaffold0385 (141-335)||(11249-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (143-335)||(23329-23521)
[»] scaffold0003 (2 HSPs)
scaffold0003 (145-242)||(45720-45817)
scaffold0003 (263-337)||(45625-45699)
[»] scaffold0100 (2 HSPs)
scaffold0100 (143-242)||(35457-35556)
scaffold0100 (278-330)||(35369-35421)


Alignment Details
Target: chr1 (Bit Score: 182; Significance: 3e-98; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 142 - 339
Target Start/End: Complemental strand, 750406 - 750209
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  750406 aggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatct 750307  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  750306 tctatttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 750209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 140 - 335
Target Start/End: Original strand, 5489773 - 5489968
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  5489773 aaaggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 5489872  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5489873 cttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 5489968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 143 - 335
Target Start/End: Complemental strand, 43571186 - 43570994
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43571087  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  43571086 ctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 48499064 - 48498865
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    |||||||||||||||||||||| |||  || |||||| |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  48499064 aaggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatc 48498965  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  48498964 ttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcatttt 48498865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 145 - 340
Target Start/End: Original strand, 7447828 - 7448022
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||| ||||  |||||||| |||||||||||||| ||||||||  ||||||||| ||| ||||||||| ||||||||||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtacaccc-atgtattacagatattttgataagttcatctcacaaccacactttatcttct 7447926  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7447927 atttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggaatggtacatgtatcatcactcttttt 7448022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 140 - 337
Target Start/End: Complemental strand, 24769602 - 24769405
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||| |||||||||| ||  || |||||| ||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||||||||    
T  24769602 aaaggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacactttat 24769503  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24769502 cttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactctt 24769405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 336
Target Start/End: Complemental strand, 50448360 - 50448167
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||||||||| |||  || |||||| ||||||||||||  |||||||||||||||||| |||| ||||||| | ||||||| ||||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatcttacaaccacattttatctt 50448261  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50448260 ctatttttgtgggttccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 50448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 145 - 336
Target Start/End: Original strand, 4401329 - 4401521
Alignment:
Q  145 aaaatgttacatgaacacccttat-ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||| ||||||||||| ||| | |||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatcttc 4401428  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  4401429 tatttgtgtggggtccaatatgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactct 4401521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 140 - 335
Target Start/End: Complemental strand, 23989627 - 23989431
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttat-ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacacttta 238  Q
    ||||||||||||||||||||||||||| | ||| ||||| | |||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  23989627 aaaggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacacttta 23989528  T
Q  239 tcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| || || |||||||||||||| |||||    
T  23989527 tcttctatttgtgtggggtccaggttgccacatgtcagaatcttgtgtgggtgtaaagggtgtattgccatatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 143 - 334
Target Start/End: Original strand, 37814778 - 37814969
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||| |||||||||  ||| |||| | ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    |||||| |||||||||||  |||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  37814878 ctatttatgtggggtccagattgccacgtgtcagaattttatatggatgtaaagggtgtattgccacatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 145 - 336
Target Start/End: Complemental strand, 2497660 - 2497469
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||| ||  ||| ||||  |||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||||| |||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacactttatcatct 2497561  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||| |||||| ||||  ||| |||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||    
T  2497560 atttatgtgggatccagattgtcacgtgtcagaattttatgtgggtataaagggtgtattgccacatggtgtggtacatgtatcaccactct 2497469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 185 - 336
Target Start/End: Original strand, 4888085 - 4888235
Alignment:
Q  185 tacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgt 284  Q
    |||| |||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||||||| |||||  |||||| || ||||||||||||    
T  4888085 tacatcccatgtattagggatattttggtaagtttatctcacaaccacactttattttctatttgtgtggtgtccaaattgccatgtatcagaattttgt 4888184  T
Q  285 gtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||| |||||||| | |||||||||||||| |||||||||||||||||||||    
T  4888185 gtggatgtaaaggatatattgccacatggg-tggtacatgtatcatcactct 4888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 48119628 - 48119727
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || ||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 48119727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 44112675 - 44112776
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||   || ||||||| ||||||||||||||| |||||||| |||||||||| ||||||||| ||||| ||||| ||    
T  44112675 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctc 44112774  T
Q  241 tt 242  Q
    ||    
T  44112775 tt 44112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 35003294 - 35003393
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || ||||||| ||||||||||||||  |||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctt 35003393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 38335918 - 38336017
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || ||||||  |||||||| |||||| |||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 38336017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 41065152 - 41065252
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||   || |||||||  |||||||||||||| |||||||  |||||||||| ||||||||| ||||| ||||| |||    
T  41065152 aggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctct 41065251  T
Q  242 t 242  Q
    |    
T  41065252 t 41065252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 46168383 - 46168482
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || || | || ||||||||||| ||| |||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 46168482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 38113296 - 38113202
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactt 236  Q
    |||||||||||| ||||||||||||   || ||||||| ||||||||||||||| ||||  || |||||||||||||||||||| ||||| ||||    
T  38113296 aggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatactt 38113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 45639834 - 45639733
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    |||||||||||||||||||||| |||   || |||| || ||||||||||||||  |||| |||||||||||||||||||||||| || || ||||| ||    
T  45639834 aaggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctc 45639735  T
Q  241 tt 242  Q
    ||    
T  45639734 tt 45639733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 45427846 - 45427746
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||| ||| ||   || ||||||| ||||||||| ||||| |||||||| |||||||||| ||||||||| ||||| ||||| |||    
T  45427846 aggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctct 45427747  T
Q  242 t 242  Q
    |    
T  45427746 t 45427746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 35003414 - 35003491
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   || ||||||||| ||||||||||    
T  35003414 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtgcatgtatcaccactcttttt 35003491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 32813336 - 32813273
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||| |||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  32813336 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccac 32813273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 44112797 - 44112872
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||     |||||||||||| ||||||||    
T  44112797 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactcttt 44112872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 45705824 - 45705924
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||| ||||||||||||   || ||||  | ||||||||| ||||| |||| ||| |||||| ||||||||||||| ||||| ||||| |||    
T  45705824 aggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctct 45705923  T
Q  242 t 242  Q
    |    
T  45705924 t 45705924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 45705945 - 45706017
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| |||||||||||||||||  |||||||||||||||||    |||||||||||| |||||    
T  45705945 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccactc 45706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 35000213 - 35000114
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||| ||   || ||||| | |||||| ||  ||||||||||||| |||||| |||||| |||||| ||||| ||||| ||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctt 35000114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 48119748 - 48119814
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||| ||||   ||||||||||||    
T  48119748 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacgtgggggtgtacatgtatca 48119814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 26440813 - 26440764
Alignment:
Q  257 tccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattg 305  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26440813 tccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattg 26440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 9474886 - 9474950
Alignment:
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  9474886 tttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 9474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 35000093 - 35000021
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| ||||||| |||||||||  | ||||||||||||||||   |||||||||||| |||||    
T  35000093 ttgccacatgtcaggattttgtatgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 35000021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 38113175 - 38113099
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| |||||| |||||||||||||||||  ||||||||| |||||||    ||||||| |||| |||||||||    
T  38113175 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgtcacatggaggtgtacatgaatcaccactctttt 38113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 45639712 - 45639640
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| ||| || |||||||||||||||||  |||||||||||||| |||   |||||||||||| |||||    
T  45639712 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacaagggggtgtacatgtatcaccactc 45639640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 2582004 - 2581941
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  2582004 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 2581941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 14427345 - 14427404
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtatta 200  Q
    ||||||||||||||||||||||||||   || ||||||| |||||||||| |||| ||||    
T  14427345 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 26585500 - 26585543
Alignment:
Q  181 attgtacaccccatgtattagggatattttggtaaattcatctc 224  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||    
T  26585500 attgtacaccccatgcattaaggatattttagtaaattcatctc 26585543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 26585582 - 26585657
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||||| |||||| ||||||||||| |||||  | ||||||||| ||||||   |||||||||||| ||||||||    
T  26585582 ttgccacatgtcaggattttgtgtggatgtaagagatgtattgccgcatgggggtgtacatgtatcaccactcttt 26585657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 41758895 - 41758832
Alignment:
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 308  Q
    |||||| |||||||||||  | |||||||||| |||||||||| ||| ||||||||||||||||    
T  41758895 tttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgcca 41758832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 46168503 - 46168554
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggg 314  Q
    ||||||| ||||| ||||||||||||||||||  | ||||||||||||||||    
T  46168503 ttgccacatgtcataattttgtgtgggtgtaagagatgtattgccacatggg 46168554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 50591011 - 50591074
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  50591011 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 50591074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 3000387 - 3000345
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  3000387 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 3000345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 38595222 - 38595180
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  38595222 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 38595180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 45427722 - 45427652
Alignment:
Q  266 ccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||| |||||| ||||||||||| || ||  ||||||||||||||||||   |||||||||||| ||||||    
T  45427722 ccacatgtcaggattttgtgtggatggaagaggtgtattgccacatggggatgtacatgtatcaccactct 45427652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 51898715 - 51898757
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  51898715 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 51898757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 13414850 - 13414785
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccacat 311  Q
    |||||||||||||| ||  | |||||| ||| |||||||||||||| ||||||||||||| |||||    
T  13414850 ttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgtcacat 13414785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 41065271 - 41065344
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||| |||||| |||||||| || |||||  ||||||||||||||||||   |||||| ||||| ||||||    
T  41065271 ttgccacatgtcaggattttgtgcggatgtaagaggtgtattgccacatgggggtgtacatatatcaccactct 41065344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 309
Target Start/End: Complemental strand, 37649268 - 37649224
Alignment:
Q  266 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||    
T  37649268 ccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccac 37649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 45044570 - 45044634
Alignment:
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||| ||||||||||| || || ||||||| |||||| ||||||| ||| |||||||||||||    
T  45044570 tttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccac 45044634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 140 - 336
Target Start/End: Original strand, 46941050 - 46941246
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  46941050 aaaggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 46941149  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  46941150 cttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactct 46941246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 40808863 - 40809057
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    |||||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  40808863 aaggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 40808962  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  40808963 ttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactc 40809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 139 - 344
Target Start/End: Original strand, 54237092 - 54237297
Alignment:
Q  139 gaaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacacttta 238  Q
    |||| |||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  54237092 gaaacgaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacacttta 54237191  T
Q  239 tcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  54237192 tcttctatttgtgtggggtccagattgccacgtgtcagaatattgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcatt 54237291  T
Q  339 ttgaaa 344  Q
    | ||||    
T  54237292 tggaaa 54237297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 335
Target Start/End: Complemental strand, 24688505 - 24688310
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  || |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  24688505 aaaggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 24688406  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  24688405 cttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggggtaaatggtgtattgccacatggggtggtacatgtatcatcactc 24688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 144 - 338
Target Start/End: Complemental strand, 42394518 - 42394324
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 42394419  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42394418 tatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 42394324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 141 - 338
Target Start/End: Complemental strand, 47191127 - 47190931
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||||| ||||||||| ||| ||||||||| ||||||||||||||    
T  47191127 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccc-atgtattagagatattttgataagttcatctcacaaccacactttatc 47191029  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47191028 ttctatttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgtaaagggtgtattgccacatggaatggtacatgtatcatcactcttt 47190931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 140 - 337
Target Start/End: Complemental strand, 54246251 - 54246054
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||| |||||||||||||    
T  54246251 aaaggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttat 54246152  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  54246151 cttctatttgtgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaagaatgtattgccacatggggtggtacatgtatcatcactctt 54246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 142 - 336
Target Start/End: Original strand, 25413680 - 25413874
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  25413680 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatct 25413779  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  25413780 tctatttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaagggtgtattgtcatatggggtggtacatgtatcatcactct 25413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 143 - 338
Target Start/End: Original strand, 36150130 - 36150325
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||| ||||||  ||| ||||||||||| ||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatctt 36150229  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  36150230 ctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactcttt 36150325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 144 - 335
Target Start/End: Original strand, 40480750 - 40480941
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||||||||||||||||||||  ||| ||  |||||||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 40480849  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  40480850 tatttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccgcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 145 - 335
Target Start/End: Complemental strand, 53581956 - 53581766
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||||||||| |||  ||| ||||| |||||||||| || ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatcttct 53581857  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  53581856 atttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacaggtatcatcactc 53581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 143 - 335
Target Start/End: Original strand, 42100688 - 42100880
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42100787  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
     ||||||||||| || || ||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||| |||||||    
T  42100788 ttatttgtgtggagttcaggttgccacgtgtcagaattttatgtgggtgtaaagggtgcattgccacatgaggtggtacatgtatgatcactc 42100880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 143 - 335
Target Start/End: Complemental strand, 45127028 - 45126836
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||| |||||||||  ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatttt 45126929  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||| |||||||||||  || |||| || ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  45126928 ctatttatgtggggtccagattaccacatgccagaattttatgtgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 45126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 185 - 336
Target Start/End: Original strand, 52629870 - 52630021
Alignment:
Q  185 tacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgt 284  Q
    ||||||| |||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtagggtccaggttgctacgtgtcagaattttgt 52629969  T
Q  285 gtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52629970 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 52630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 141 - 337
Target Start/End: Complemental strand, 53273786 - 53273599
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||| ||||||| | ||  |||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  53273786 aaggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatc 53273687  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    || ||||| |||||| |||| ||| |||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  53273686 ttttatttatgtgggatccaggttaccacgtatcagaattttgtgt---------aggtgtattgccacatgggatggtacatgtatcatcactctt 53273599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 337
Target Start/End: Original strand, 1078229 - 1078412
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||||||  ||||| |||| |||||||||||  |||||||||| ||||||| |||  ||||||||| ||        ||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtattagg-atatttttgtaggttcatctcacaa--------tatcttct 1078319  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    |||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1078320 atttgtgtggagttcaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactctt 1078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 145 - 335
Target Start/End: Original strand, 27748565 - 27748746
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||| ||  ||| |||||| |||| ||||||  ||||||||||||||||||||||| ||||||||| ||| | ||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatcttct 27748664  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||| |||||||| ||||||||||||||||          |||||||||||||||||| |||||||||||||| |||||    
T  27748665 atttgtgtggggtccaggttgccacatgtcagaattttgtgt---------cggtgtattgccacatggggtggtacatgtatcaccactc 27748746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 140 - 338
Target Start/End: Complemental strand, 11064823 - 11064627
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||||  |||||| | ||  ||| |||||| |||||||||||| |||  |||| ||||||||| | ||||||||||| || |||||||  |    
T  11064823 aaaggaaaatgtta--tgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttgattaattcatctcataatcacacttact 11064726  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||||||||||||||||| |  || |||| ||||| |||||||||||||||||| |||||||||| ||||   ||  |||||||||||| ||||||||    
T  11064725 cttctatttgtgtggggtctagattaccacatgtcaaaattttgtgtgggtgtaaggggtgtattgtcacacaagagtgtacatgtatcaccactcttt 11064627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 51249343 - 51249449
Alignment:
Q  178 cccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcaga 277  Q
    |||||| |||||| |||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||  ||||||| |||||||    
T  51249343 cccattatacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctcttctatttgtgtgggatccagattgccacatgtcaga 51249442  T
Q  278 attttgt 284  Q
    |||||||    
T  51249443 attttgt 51249449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 335
Target Start/End: Original strand, 9434121 - 9434316
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||   || ||||| | ||||||||||||||| |||||||| |||||||||| ||||||||| ||||| ||||| |    
T  9434121 aaaggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttct 9434220  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||  || |        |     ||||||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||| |||||    
T  9434221 ctttcatctcctctcacttttccttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 9434316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 4190368 - 4190266
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||   || ||||||| ||||||||||  ||||||||| ||||||||||||||||||||||| ||||| ||||| |    
T  4190368 aaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttct 4190269  T
Q  240 ctt 242  Q
    |||    
T  4190268 ctt 4190266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 10457994 - 10457893
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||| ||   || ||||||| ||||||||||||||| |||| ||||||||||||||||| |||||| ||||| ||||| ||    
T  10457994 aaggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctc 10457895  T
Q  241 tt 242  Q
    ||    
T  10457894 tt 10457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 25996267 - 25996356
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaacca 231  Q
    |||||||||||||||||||||||||   || |||| |  |||||||||||||| ||||| ||| |||||||||||||||||||| |||||    
T  25996267 aggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaacca 25996356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 29558337 - 29558232
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||| ||||||| ||||||||||||  ||| |||| | |||||||||||| || ||||||| |||| ||||||||||||||||| || |||| |||||    
T  29558337 aaaggacaatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaatcacattttat 29558238  T
Q  240 cttcta 245  Q
     |||||    
T  29558237 tttcta 29558232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 26141543 - 26141606
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    |||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  26141543 ttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccac 26141606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 29556956 - 29556864
Alignment:
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||||||||||| || |||||||| ||||||| |||| | ||||||||||  |||||||||||||||   |||||||||||||| ||||||||    
T  29556956 atttgtgtggggttcaggttgccacatgtcaga-ttttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactcttt 29556864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 52628079 - 52627978
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    |||||||||||||| |||||||||||   || |||| || |||||||||| |||| |||| | |||||||||||||||||||||| || || ||||| ||    
T  52628079 aaggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctc 52627980  T
Q  241 tt 242  Q
    ||    
T  52627979 tt 52627978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 19148882 - 19148965
Alignment:
Q  257 tccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    |||| |||||||  ||||||||||||||||||||||||  ||||||||||||||||||   |||||||| ||| || |||||||    
T  19148882 tccaggttgccatatgtcagaattttgtgtgggtgtaagtggtgtattgccacatgggggtgtacatgtgtcaccattcttttt 19148965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 34791829 - 34791928
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || ||||||  |||||| ||| |||| |||||||| |||||  ||| ||||||||| ||||| ||||| ||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctt 34791928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 40488174 - 40488216
Alignment:
Q  297 ggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  40488174 ggtgtattgccacataggatggtatatgtatcatcactctttt 40488216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 20764932 - 20764989
Alignment:
Q  253 ggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||| ||||||| ||||    
T  20764932 ggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccac 20764989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 51757713 - 51757789
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    ||||||| |||||| ||| |||||||||||||  ||| |||||||||||||| | |||||||||||| ||||| ||||    
T  51757713 ttgccacatgtcaggattgtgtgtgggtgtaagaggtatattgccacatggggt-gtacatgtatcaccactcatttt 51757789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 4190245 - 4190197
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacat 311  Q
    ||||||| |||||| |||||||||||||||||  |||||||||||||||    
T  4190245 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacat 4190197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 17470494 - 17470431
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    |||||||||||||| ||  | |||||||||| ||||||||||||| |||| |||||||||||||    
T  17470494 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccac 17470431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 33644289 - 33644226
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  33644289 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 33644226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 34791949 - 34792019
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    ||||||| |||||| ||||||||||| |||||  |||||||||||| ||||||| ||| |||||||| ||||    
T  34791949 ttgccacatgtcaggattttgtgtggatgtaagaggtgtattgccatatgggat-gtagatgtatcaccact 34792019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 49607503 - 49607440
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||||||| |||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  49607503 ttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 49607440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 51419371 - 51419430
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattg 305  Q
    ||||| |||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  51419371 ttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattg 51419430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 53982100 - 53982037
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  53982100 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 53982037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 54429235 - 54429180
Alignment:
Q  273 tcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatc 328  Q
    ||||||||||||||||||||||  |||||||||||| |||||   |||||||||||    
T  54429235 tcagaattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatc 54429180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 10457872 - 10457798
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||| |||||| ||||||||||| |||||  |||||||||||||||| |    ||||||||||| |||||||    
T  10457872 ttgccacatgtcaggattttgtgtggatgtaagaggtgtattgccacatgagggtatacatgtatcaacactctt 10457798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 11095385 - 11095427
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  11095385 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 11095427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 45058564 - 45058626
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccac 309  Q
    ||||| ||||||||| | | ||| ||||||| |||| ||||||||| ||||||||||||||||    
T  45058564 ttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaagggtgtattgccac 45058626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 52629368 - 52629326
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  52629368 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 52629326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 11347940 - 11347992
Alignment:
Q  254 gggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattg 305  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||||| |||||||    
T  11347940 gggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattg 11347992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 307
Target Start/End: Complemental strand, 31456757 - 31456717
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcc 307  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  31456757 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcc 31456717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 4e-82; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 1771368 - 1771170
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||| ||||||    
T  1771368 aaggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaaccacattttatc 1771269  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1771268 ttctatttatgtggggtccaagttgccacgtctcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactctttt 1771170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 143 - 338
Target Start/End: Original strand, 27550309 - 27550504
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  || |||||| |||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27550409 ctatttatgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 27550504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 141 - 337
Target Start/End: Complemental strand, 28982924 - 28982728
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||  || |||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| |||| |||||||||    
T  28982924 aaggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaaccgcactttatc 28982825  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  28982824 ttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactctt 28982728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 33703139 - 33703333
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||  || ||||| |  ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  33703139 aaggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 33703238  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  33703239 ttctatttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactc 33703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 140 - 336
Target Start/End: Original strand, 23035977 - 23036173
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||  ||||  ||||||||||| ||||||||||| || ||||||||||||||| |||| ||||||||| |||||||||||||    
T  23035977 aaaggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttat 23036076  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  23036077 cttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtgttgccacatggggtggtacatgtatcatcactct 23036173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 143 - 335
Target Start/End: Original strand, 35017733 - 35017924
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||| | | ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgtat-agggatattttggtaagttcatctcacaaccacactttatctt 35017831  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||||||||||||||||    
T  35017832 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaagatgtattgccacatggggtggtacatgtatcatcactc 35017924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 25051691 - 25051885
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||| |||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||    
T  25051691 aaggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatc 25051790  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||| |||| ||||||||||||||||||||    
T  25051791 ttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaatgatgtattgccacgtggggtggtacatgtatcatcactc 25051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 132 - 347
Target Start/End: Complemental strand, 55966457 - 55966242
Alignment:
Q  132 cttttctgaaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaacca 231  Q
    |||||| |||||||||||||||||| |||||||||  ||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  55966457 cttttccgaaaggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaacca 55966358  T
Q  232 cactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatc 331  Q
    || |||||||||||||| ||||||||| |  ||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |    
T  55966357 caatttatcttctatttatgtggggtctagattgccacctgtcagaattttatgtgggtgtaaagggtgtattgccacatggagtggtacatgtatcacc 55966258  T
Q  332 actctttttgaaaata 347  Q
    |||||||  |||||||    
T  55966257 actctttccgaaaata 55966242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 145 - 335
Target Start/End: Complemental strand, 43514784 - 43514594
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||  |||||||||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaaccacaccttatcttct 43514685  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||| | ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  43514684 atttgtgtggggtctaggttgccacgtgtcagaattttttgtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactc 43514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 145 - 335
Target Start/End: Complemental strand, 27893940 - 27893750
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||| ||  ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttct 27893841  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||| ||||||||| |  ||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  27893840 atttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 27893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 146 - 335
Target Start/End: Complemental strand, 23204875 - 23204686
Alignment:
Q  146 aaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttcta 245  Q
    ||||||||||||||||| |||  |||||||| ||||||||||| || |||||||||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatcttcta 23204776  T
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||| ||||||||||| |||||||| |||||||||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  23204775 tttatgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaaggatatattgccacatgggatggtacgtgtatcatcactc 23204686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 140 - 337
Target Start/End: Original strand, 27864561 - 27864758
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||||||| |||||| ||  ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  27864561 aaaggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 27864660  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
     |||||||| |||||||| ||  || |||| |||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  27864661 tttctatttatgtggggttcagattaccacatgtcagaattttatgtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactctt 27864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 145 - 335
Target Start/End: Complemental strand, 43949900 - 43949709
Alignment:
Q  145 aaaatgttacatgaacacccttat-ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||| ||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 43949801  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||| ||| ||||   ||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||||||||||||||||    
T  43949800 tatttgtgcgggatccaatatgccacgtgtcagaattttgtatgggtataaagggtgtattgccaaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 336
Target Start/End: Complemental strand, 27316813 - 27316619
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||| | ||||||||||  |||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatctt 27316714  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaa-ttttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||| | ||| ||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||    
T  27316713 ctatttatttggagtccaagttgccacgtgtcagaatttttgtgtggatgtaaagggtgtattgtcacatgggatgataaatgtatcatcactct 27316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 145 - 338
Target Start/End: Original strand, 43735744 - 43735937
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||| ||||||||||| ||||  |||||||| | |||| ||||  ||||||||||| ||||||||| ||| ||||||||| || |||||||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcacaatcacactttatcttct 43735843  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||||||||| |||| |||| |||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  43735844 atttgtgtgggatccaagttgtcacgtgtcagaattttatgtggatgtaaagggtgtattgccacgtggggtggtacatgtatcatcactcttt 43735937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 335
Target Start/End: Original strand, 12496956 - 12497148
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||| ||||||||||||  ||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||| | || |||||||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 12497055  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||| ||| ||  ||||||||||| |||||||||||||||||||||  |||||||| |||||||| |||| |||||||||| ||||    
T  12497056 ctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtcacatggggtggtgcatgtatcattactc 12497148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 145 - 336
Target Start/End: Original strand, 31680904 - 31681095
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||| | |||||| ||  ||| ||||  |||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatcttct 31681003  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||| ||||||||  |  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  31681004 atttatgtggggtttagattgccacgtgtcagaattttatgtaggtgtaaagggtgtattgccacatgggatgctacatgtatcaccactct 31681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 145 - 314
Target Start/End: Original strand, 39631102 - 39631272
Alignment:
Q  145 aaaatgttacatgaacacccttat-ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||| ||||||||| ||||| | |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 39631201  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggg 314  Q
    |||||||||||||| ||   || ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  39631202 tatttgtgtggggttcaatatgtcacgtgtcagaattttgtgtgggtgtaaaggatgtattgtcacatggg 39631272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 340
Target Start/End: Original strand, 28988470 - 28988669
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  ||| |||||| |||||||||||||||| | |||||| |||||| ||||||||||||| ||||||||||| |    
T  28988470 aaaggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttct 28988569  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||||||||||||||||| |||||||  |||||||||||||| || | |||| |||||||||| |||||| |   |||||||||||| |||||||||    
T  28988570 cttctatttgtgtggggtccaggttgccatatgtcagaattttgtatgag-gtaaggggtgtattgtcacatgagggtgtacatgtatcaccactctttt 28988668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 5664494 - 5664388
Alignment:
Q  18 gatgtaacttgtaaggaccttctggttgtattggctatgcattaggatgttggggtgcttattatgcataggtggtatggtgtcaaatatgtttttggcg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5664494 gatgtaacttgtaaggaccttctggttgtattggctatgcattaggatgttggggtgcttattatgcataggtggtgtggtgtcaaatatgtttttggcg 5664395  T
Q  118 tttatcc 124  Q
    |||||||    
T  5664394 tttatcc 5664388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 185 - 335
Target Start/End: Complemental strand, 51512323 - 51512173
Alignment:
Q  185 tacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgt 284  Q
    ||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  51512323 tacaccccatgtattagagatattttggtaagttcatcttataaccacactttatcttttatttgtgtggggtccaggttgccacgtgtcagaattttgt 51512224  T
Q  285 gtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||| | || | ||||||||||| |||| ||||||||||||||||||||    
T  51512223 gtgggtattaaagatgtattgccacgtggggtggtacatgtatcatcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 142 - 329
Target Start/End: Complemental strand, 48463551 - 48463364
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    ||||||||||||||| |||||| ||  ||| ||||   ||||||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||| |    
T  48463551 aggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttattt 48463452  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    ||||||| |||||||| ||  || |||| |||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||    
T  48463451 tctatttatgtggggttcagattaccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatagagtggtacatgtatca 48463364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 21687005 - 21687200
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||| ||||  ||  ||||||||||| |||| |  |||||||||  ||||||| |||| ||||||||| ||||| |||||||||    
T  21687005 aggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctcataaccatactttatct 21687104  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||| ||| || || ||||||||||||||||||||||||||  |||||||  ||||||||||||| || |||||||| |||||||||||||    
T  21687105 tctatttgtctggagttcaggttgccacgtgtcagaattttgtgtgaatgtaaagaatgtattgccacataggttggtacatatatcatcactctt 21687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 329
Target Start/End: Original strand, 41847971 - 41848157
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||| ||||| |||| ||||  ||||| |||||||||||||||| ||||| || ||||||| ||||||||| || ||||||||||| ||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    ||||||||||||||| ||  ||| ||| ||||||||||||| |||| ||||| |||||||||||||||||||   ||||||||||||    
T  41848071 ctatttgtgtggggttcagattgtcacatgtcagaattttgcgtggatgtaaggggtgtattgccacatgggggtgtacatgtatca 41848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 329
Target Start/End: Complemental strand, 45490413 - 45490227
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||  ||  ||  |||| || |||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatctt 45490314  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    ||||||||  ||| |||| |||||||||||||||||| ||||||||||||||| | | ||||||||||| || |  |||||||||||    
T  45490313 ctatttgtacgggatccaggttgccacgtgtcagaatcttgtgtgggtgtaaatgatatattgccacatagggtactacatgtatca 45490227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 41878407 - 41878567
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    ||||||||||||||||||| |||  ||| |||||| |||||||||||| ||  ||||||||||||||| ||| ||||||||| ||||| || || |||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctcttc 41878506  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtatt 304  Q
    |||||||||||||||||  ||| |||||||||||||||||||| ||||||||| |||||||    
T  41878507 tatttgtgtggggtccagattgtcacgtgtcagaattttgtgttggtgtaaagagtgtatt 41878567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 145 - 308
Target Start/End: Complemental strand, 41327641 - 41327478
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||  ||||||||  |||  |||||||||||||||||  ||| | || ||| |||||||||||||||||||| | ||||||||| |||||     
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctcttca 41327542  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcca 308  Q
    |||||||||||||||| |||||||| ||| |||||||| |||| |||||| |||||||||||||    
T  41327541 atttgtgtggggtccaggttgccacatgttagaattttttgtgagtgtaaggggtgtattgcca 41327478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 56215943 - 56215805
Alignment:
Q  197 attagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaag 296  Q
    ||||| |||||||||| ||||| |||||| ||||||||||| ||| |||||||||||||||| | ||||| |  ||||||||||||||||||||||||      
T  56215943 attagcgatattttggaaaatttatctcacaaccacactttctct-ctatttgtgtggggtctaggttgctatatgtcagaattttgtgtgggtgtaaga 56215845  T
Q  297 ggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||| |||||||||    |||||||||||| ||||||    
T  56215844 ggtgtatggccacatggtggtgtacatgtatcaccactct 56215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 17619252 - 17619153
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||| ||   || ||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 17619153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 46412516 - 46412417
Alignment:
Q  196 tattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaa 295  Q
    |||||| ||||||||||||| ||| ||||| |||||||||||||||||||||| ||||||||  |  |||||||||||||||||||||||| | ||||||    
T  46412516 tattagagatattttggtaagttcttctcacaaccacactttatcttctatttatgtggggtttaaattgccacgtgtcagaattttgtgtagatgtaaa 46412417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 711958 - 712059
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||   || ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||| || || ||||| ||    
T  711958 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctc 712057  T
Q  241 tt 242  Q
    ||    
T  712058 tt 712059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 55272476 - 55272377
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||| ||||   || ||||| | ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 55272377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 3756344 - 3756264
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctca 225  Q
    ||||||||||||||||||||||   || ||||||| ||||||||||||||| |||| ||||||||| ||||||| ||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctca 3756264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 32728356 - 32728456
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||| ||||   || ||||||| ||||||||||||||| |||| ||| ||||| |||||||||||||| || || ||||| |||    
T  32728356 aggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctct 32728455  T
Q  242 t 242  Q
    |    
T  32728456 t 32728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 48435680 - 48435580
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||| ||||||||||||||| ||   ||  |||||| ||||||||||||||| |||||||| || ||||||||||||||||| || || |||||||||    
T  48435680 aggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatct 48435581  T
Q  242 t 242  Q
    |    
T  48435580 t 48435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 35037002 - 35037093
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaacca 231  Q
    |||| |||||||||||||| |||||||    | ||||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  35037002 aaagaaaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaacca 35037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 960972 - 960890
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 223  Q
    ||||||||||||||||||||||||||   || ||||| | ||||||||||| ||  |||||||| ||||||||||||||||||    
T  960972 aaggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 19880074 - 19880147
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   |||||||||||| ||||||    
T  19880074 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 19880147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 55272356 - 55272284
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   |||||||||||| |||||    
T  55272356 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 55272284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 382
Target Start/End: Complemental strand, 5664388 - 5664341
Alignment:
Q  335 ctttttgaaaatacttggtaatgttttgtcatccgactttctagcaca 382  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||    
T  5664388 ctttttgaaaatacttggtaatgttttgttgtccgactttctagcaca 5664341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 35037125 - 35037200
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||| |||  |||||||||||| |||| ||||    
T  35037125 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacat-ggagtgtacatgtatcaccactatttt 35037200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 712080 - 712130
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgg 313  Q
    ||||||| |||||| |||||||||||||||||  |||||||||||||||||    
T  712080 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgg 712130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 17619132 - 17619058
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||  ||||   |||||||||||| |||||||    
T  17619132 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccaggtggggatgtacatgtatcaccactctt 17619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 19879987 - 19880053
Alignment:
Q  176 accccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||| |||||||||||||| ||||| ||| |||||||||||||||||||| || || ||||| ||||    
T  19879987 accctattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctt 19880053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 46827686 - 46827604
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttttgaaaa 345  Q
    ||||||| |||||| |||||||||||||||||  | |||||| ||||||||    |||||||||||| |||||||||| ||||    
T  46827686 ttgccacatgtcaggattttgtgtgggtgtaagagatgtatttccacatggaggtgtacatgtatcaccactcttttttaaaa 46827604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 3756232 - 3756159
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||| |||||  ||||| |||||||||||  | |||||||||||||||||  |||||||||||| ||||||    
T  3756232 ttgccacatgtcatgattttatgtgggtgtaagagttgtattgccacatgggagtgtacatgtatcaccactct 3756159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 46827809 - 46827724
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctca 225  Q
    |||||||||||||||||||||||||||   || ||||| | ||||||||||| ||| |||| | |  |||||||||||| ||||||    
T  46827809 aaaggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctca 46827724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 49229765 - 49229684
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 223  Q
    |||||||||||| ||||||| ||||   || ||||||| |||||||||  |||| |||| ||||||| ||||||||||||||    
T  49229765 aggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 48435559 - 48435487
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| |||||||||||||||||  | ||||||| ||||||||   |||||||||||| |||||    
T  48435559 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgtcacatgggggtgtacatgtatcaccactc 48435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 50526201 - 50526245
Alignment:
Q  266 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  50526201 ccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 50526245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 55475273 - 55475217
Alignment:
Q  254 gggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||| | ||||| ||||||| |||||||||||||| |||||||||||||||||    
T  55475273 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccac 55475217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 17983754 - 17983817
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  17983754 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 17983817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 29977974 - 29977911
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||||||||||||| |  | |||||||||| ||||||||||||| ||| ||||||||||||||    
T  29977974 ttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 29977911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 48183060 - 48183123
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  48183060 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 48183123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 50052439 - 50052502
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  50052439 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 50052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 960850 - 960802
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacat 311  Q
    ||||||| |||||| |||||||||||||||||  ||||||||| |||||    
T  960850 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgtcacat 960802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 29589751 - 29589811
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgc 306  Q
    ||||||||||||||| | ||||| | ||||| |||||||||||||| || |||||||||||    
T  29589751 ttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattgc 29589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 32728492 - 32728552
Alignment:
Q  278 attttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||| |||| ||||||  ||||||||||||||||||   |||||||||||| ||||||||    
T  32728492 attttttgtgcgtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcttt 32728552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 6e-81; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 140 - 336
Target Start/End: Complemental strand, 36743586 - 36743390
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  36743586 aaaggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 36743487  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  36743486 cttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 36743390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 143 - 330
Target Start/End: Original strand, 29705362 - 29705549
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 29705461  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcat 330  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29705462 ctatttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcat 29705549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 143 - 336
Target Start/End: Original strand, 11582766 - 11582959
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  11582866 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactct 11582959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 140 - 337
Target Start/End: Complemental strand, 30660845 - 30660648
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||||    
T  30660845 aaaggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttat 30660746  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  30660745 cttctatttgtgtggggtccaggttgccacgtgtcagaattttatgtggatgtaaagggtgtattgccacataggatgatacatgtatcatcactctt 30660648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 143 - 331
Target Start/End: Complemental strand, 2166063 - 2165875
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||| ||||||||||||| ||  |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatc 331  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2165963 ctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgtcacatgggatggtacatgtatcatc 2165875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 142 - 334
Target Start/End: Complemental strand, 42197536 - 42197344
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||| ||  |||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  42197536 aggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatct 42197437  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42197436 tctatttgtgtggggtccagattgccacgtgtcaaaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 145 - 340
Target Start/End: Complemental strand, 30912660 - 30912465
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| |||| ||| |||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaaccgcaccttatcttct 30912561  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  30912560 atttgtgtggggtctaggttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactcttttt 30912465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 142 - 335
Target Start/End: Original strand, 2546995 - 2547188
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    ||||||||||||||||||||| |||  || |||||| |||||||||||| ||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  2546995 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatct 2547094  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  2547095 tctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactc 2547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 144 - 336
Target Start/End: Original strand, 45397317 - 45397508
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    ||||||||||| |||||||||||  ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||| ||||||| |||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatcttc 45397416  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  45397417 tatttgtgtgggctccagattgccacgtgtcagaattttgtgtgggtgtaaagggtgtgttgccacatggg-tggtacatgtatcatcactct 45397508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 140 - 335
Target Start/End: Original strand, 42295192 - 42295386
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||| ||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  42295192 aaagaaaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttat 42295291  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||| ||| ||||||| |||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||    
T  42295292 cttctatttatgt-gggtccaagttgccacatgtcagaattttgtgtggatgtaaagggtatattgccacataggatggtacatttatcatcactc 42295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 145 - 329
Target Start/End: Complemental strand, 29801048 - 29800864
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||| ||  ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 29800949  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    |||| ||||||||| |  ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  29800948 atttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatca 29800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 145 - 339
Target Start/End: Original strand, 20148762 - 20148956
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||||||  ||| |||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||| |||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatct 20148861  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    |||| |||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  20148862 atttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactctttt 20148956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 142 - 335
Target Start/End: Original strand, 31384663 - 31384856
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||| | ||||||||||||||||  ||| ||||  | |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  31384663 aggaaagtattacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatct 31384762  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||||||||    
T  31384763 tctatttgtgtggggtccaggttgctacgtgtcagaattttatgtggatgtaaagggtatattgccacatggggtggtacatatatcatcactc 31384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 5754900 - 5755072
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||| ||  |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  5754900 aaaggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttat 5754999  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatg 312  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  5755000 cttctatttatgtgggatccaagttgccacgtgttagaattttgtgtgggtgtaaagggtgtattgccccatg 5755072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 145 - 334
Target Start/End: Original strand, 26125637 - 26125825
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||||||  ||| ||||  ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 26125736  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    |||| ||| |||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  26125737 atttatgt-gggtccagattgccacgtgtcagaattttatgcgggtgtaaagggtgtattgccacatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 185 - 335
Target Start/End: Original strand, 9241594 - 9241744
Alignment:
Q  185 tacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgt 284  Q
    ||||||| || ||||||||||||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  9241594 tacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 9241693  T
Q  285 gtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  9241694 gtgggtgcaaagggtgtgttgccacatggggtggtacatgtatcatcactc 9241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 143 - 338
Target Start/End: Original strand, 1375542 - 1375737
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||| ||||||||||||| ||  ||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatctt 1375641  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||||||| || ||  ||||||||||| ||||| ||||||||||||||||  ||||||| ||||| || |||||||||||||| ||||||||    
T  1375642 ctatttgtgtggagttcagattgccacgtgttagaatcttgtgtgggtgtaaagaatgtattgtcacatagggtggtacatgtatcaccactcttt 1375737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 178 - 335
Target Start/End: Original strand, 3743806 - 3743963
Alignment:
Q  178 cccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcaga 277  Q
    |||||| |||||||||| ||||| | |||||||| ||| ||||||||| |||||||||||||||||||||| ||| |||| ||  |||||||||||||||    
T  3743806 cccattatacaccccatatattaagtatattttgataagttcatctcacaaccacactttatcttctatttatgtagggttcagattgccacgtgtcaga 3743905  T
Q  278 attttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  3743906 attttatgtgggtgtaaagggtgtattgctacatggggtggtacatatatcatcactc 3743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 142 - 312
Target Start/End: Complemental strand, 40528736 - 40528565
Alignment:
Q  142 aggaaaatgttacatgaacacccttat-ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||  ||||||||||||||| | |||  | ||||||||||||||||||| ||||||||| |||||| |||||| |||||| ||||||||||| ||    
T  40528736 aggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctc 40528637  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatg 312  Q
    ||||||||||||||||| || |||| ||| ||||| |||||||||||| |||||| | | ||||| ||||||    
T  40528636 ttctatttgtgtggggttcaagttgtcacatgtcataattttgtgtggatgtaaatgatatattgtcacatg 40528565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 42699259 - 42699353
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||  |||||||| ||||||||| |||| ||||||||| |||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 35181513 - 35181615
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||   || ||||||| ||||||||||||||| |||||||| |||||||||| ||||||||| ||||| ||||| |    
T  35181513 aaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttct 35181612  T
Q  240 ctt 242  Q
    |||    
T  35181613 ctt 35181615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 34304786 - 34304887
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||| ||||   || ||||||| ||||||||||||||| |||||||| |||||||||| ||||||||| ||||| ||||| ||    
T  34304786 aaggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctc 34304885  T
Q  241 tt 242  Q
    ||    
T  34304886 tt 34304887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 18066819 - 18066719
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||   || ||||  | |||||||| ||||||||||||||||||||| |||| ||||||||| ||||| ||||| |||    
T  18066819 aggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctct 18066720  T
Q  242 t 242  Q
    |    
T  18066719 t 18066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 16603727 - 16603633
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactt 236  Q
    |||||||||||||||| ||||||||   || ||||||  ||| ||||||||||| ||||  || |||||||||||||||||||| ||||| ||||    
T  16603727 aggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatactt 16603633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 33630096 - 33629994
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||| ||||||||||| ||||||||||   || |||||| |||||||||||| ||| |||||||| ||||| |||| ||||||||| ||| | ||||| |    
T  33630096 aaagaaaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttct 33629997  T
Q  240 ctt 242  Q
    |||    
T  33629996 ctt 33629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 34304908 - 34304981
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||| | |||||||||||| |||||||    
T  34304908 ttgccacatgtcaggattttgtttgggtgtaagaggtgtattgccacatggggt-gtacatgtatcaccactctt 34304981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 10678132 - 10678060
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   |||||||||||| |||||    
T  10678132 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 10678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 16358933 - 16358839
Alignment:
Q  144 gaaaatgttacat-gaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacacttt 237  Q
    ||||||||||||| ||| ||||||   || ||||||| |||||||| |||||| |||| | |||||||| ||||||||||||| ||||| |||||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatacttt 16358839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 10678210 - 10678153
Alignment:
Q  185 tacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||| ||||| ||| |||||||||||||||||||| ||||| ||||| ||||    
T  10678210 tacaccccatatattaaggacattttggtaaattcatctcacaaccatactttctctt 10678153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 35181636 - 35181685
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatg 312  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||    
T  35181636 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatg 35181685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 33629973 - 33629901
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| ||||| |||||||||| |||||||  ||||||||||||||||||   |||||| ||||| |||||    
T  33629973 ttgccacatgtcaaaattttgtgtaggtgtaagaggtgtattgccacatgggggtgtacatatatcaccactc 33629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 15048193 - 15048255
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||||| || |||||||||| |||||||| ||||| |||||||||||||||||    
T  15048193 ttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccac 15048255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 15197422 - 15197359
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  15197422 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 15197359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 16383466 - 16383403
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  16383466 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 16383403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 5957898 - 5957856
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  5957898 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 5957856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 37038547 - 37038505
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  37038547 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 37038505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 16056412 - 16056477
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaaggg-tgtattgccacat 311  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| ||||| ||||||| |||||    
T  16056412 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacat 16056477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 21279928 - 21280123
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||  || |||||  |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21279928 aggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatct 21280027  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  21280028 tctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtatattgccacatggggtggtacatgtatcatcactctt 21280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 142 - 337
Target Start/End: Complemental strand, 9698434 - 9698239
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9698434 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 9698335  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  9698334 tctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactctt 9698239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 26670112 - 26669913
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  26670112 aaaggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttat 26670013  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||    
T  26670012 cttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatcaccgctctttt 26669913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 145 - 335
Target Start/End: Original strand, 30735984 - 30736174
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||  ||  |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| || |||||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatcttct 30736083  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30736084 atttatgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 30736174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 140 - 337
Target Start/End: Complemental strand, 7273438 - 7273241
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||    
T  7273438 aaaggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttat 7273339  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||    
T  7273338 cttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattaccacatggggtggtacatgcatcatcactctt 7273241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 145 - 335
Target Start/End: Complemental strand, 24204085 - 24203895
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||| ||  ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatattct 24203986  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||||    
T  24203985 atttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgtcacatggagtggtacatgtatcatcactc 24203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 140 - 349
Target Start/End: Original strand, 3213397 - 3213606
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||||||| |||||||||  ||| |||| | ||||||||||||||||||||| |||||||||||||||||||| ||| ||||| |||||||    
T  3213397 aaaggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttat 3213496  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |    
T  3213497 cttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactcttat 3213596  T
Q  340 tgaaaatact 349  Q
    | ||||||||    
T  3213597 ttaaaatact 3213606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 140 - 345
Target Start/End: Original strand, 7367546 - 7367751
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||| ||||||| | ||  ||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  7367546 aaaggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacactttat 7367645  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
     |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7367646 tttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcattctttt 7367745  T
Q  340 tgaaaa 345  Q
    | ||||    
T  7367746 ttaaaa 7367751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 140 - 329
Target Start/End: Original strand, 7292744 - 7292933
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||| ||||||| ||  ||| |||||| |||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  7292744 aaaggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 7292843  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  7292844 cttctatttgtgtggggtccaggttgccacgtgtcagaattttgtttgtgtgtaaagggtgtattgccacatggggtggtacatgtatca 7292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 143 - 334
Target Start/End: Complemental strand, 13743321 - 13743130
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||| ||  ||| |||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13743222  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||||||||||||| ||||    
T  13743221 ctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 143 - 334
Target Start/End: Complemental strand, 13748821 - 13748630
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||| ||  ||| |||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13748722  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||||||||||||| ||||    
T  13748721 ctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 140 - 337
Target Start/End: Original strand, 26466796 - 26466993
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  26466796 aaaggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttat 26466895  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||| |||||| || |||||||||| |||| ||||||| |||||||||| ||||||||||||||| || ||||| ||||||||||||||||    
T  26466896 cttctatttgtttggggttcaggttgccacgtatcaggattttgtatgggtgtaaaaggtgtattgccacatagggtggtaaatgtatcatcactctt 26466993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 143 - 340
Target Start/End: Original strand, 30014343 - 30014540
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||||| |||||| |||| ||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    |||||| | ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||    
T  30014443 ctatttatatggggtccaagttaccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtgatacatgtatcatcacttttttt 30014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 142 - 336
Target Start/End: Complemental strand, 21293778 - 21293584
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    ||||||||||||||| |||||||||  ||| ||||   || |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  21293778 aggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatct 21293679  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  21293678 tctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatgaggtggtacatgtatcaccactct 21293584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 27441544 - 27441641
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||   || ||||||| |||||||| || |||||||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 33242401 - 33242502
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||| ||   || ||||||  |||||||||||||||||||| ||| |||||||||||||||||||| || || ||||| ||    
T  33242401 aaggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctc 33242500  T
Q  241 tt 242  Q
    ||    
T  33242501 tt 33242502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 33253913 - 33254012
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||| ||   ||  |||||| ||||||||||||||| |||||||| || ||||||||||||||||| || || ||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 33254012  T

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Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 31109323 - 31109245
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattca 220  Q
    |||||||||||||||||||||||||   || |||| |||||| ||||||||||| | ||||||||||||| ||||||||    
T  31109323 aggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattca 31109245  T

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Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 33242523 - 33242595
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   |||||||||||| |||||    
T  33242523 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 33242595  T

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Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 27441662 - 27441736
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||| |||||| ||||| |||||||||||  ||||||||||||||||||   |||||||||||| |||||||    
T  27441662 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 27441736  T

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Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 22880669 - 22880732
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | ||||||||||||||||||||||||| |||||||||||||||||    
T  22880669 ttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccac 22880732  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 31109202 - 31109125
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||| ||   | |||||| ||| ||||||||||    
T  31109202 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacataggggtgcacatgtgtcaacactcttttt 31109125  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 33254034 - 33254107
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||| |||| | ||||||||||||| |||| |||||||||||||||||    |||||||||||| ||||||    
T  33254034 ttgccacatgtccggattttgtgtgggtataaaaggtgtattgccacatggaggtgtacatgtatcaccactct 33254107  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 4231637 - 4231574
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggt-gtaaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||||||||||| |||||||||||| | || ||||||||||||||    
T  4231637 ttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccac 4231574  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 15508035 - 15508098
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  15508035 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 15508098  T

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Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 15990053 - 15990116
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  15990053 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 15990116  T

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Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 30341371 - 30341434
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  30341371 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 30341434  T

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Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 31976337 - 31976274
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||| ||||| |||||  |||||||||||| ||||||||||||| |||||||| |||||||||    
T  31976337 ttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccac 31976274  T

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Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 32869767 - 32869704
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  32869767 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 32869704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 682 - 881
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  682 aaaggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttat 781  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||    
T  782 cttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatcaccgctctttt 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 5e-78; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 30838631 - 30838826
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||  || ||||| |  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  30838631 aggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 30838730  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  30838731 tctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtaggtgtaaaaggtgtattgccacatggggtggtacatgtatcatcactctt 30838826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 144 - 338
Target Start/End: Original strand, 19047158 - 19047352
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 19047257  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19047258 tatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 19047352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 143 - 335
Target Start/End: Original strand, 1750414 - 1750606
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||  |||||||||||    
T  1750514 ctatttgtgtggggtccagattgccacgtgtcagaattttgtgtgagtgtaaagggtgtgttgccacatggggtggtacaaatatcatcactc 1750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 140 - 336
Target Start/End: Complemental strand, 4764829 - 4764633
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||||||| |||||| ||  ||||||||||| ||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||    
T  4764829 aaaggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttat 4764730  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| | |||||||||||||||||||||    
T  4764729 cttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactct 4764633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 145 - 341
Target Start/End: Complemental strand, 43490499 - 43490303
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||||||  |||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatcttct 43490400  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttttg 341  Q
    |||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  43490399 atttatgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtagcatcactctttttg 43490303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 140 - 336
Target Start/End: Complemental strand, 12302356 - 12302160
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  12302356 aaaggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttat 12302257  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||| ||||||||||| ||| ||| ||||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||| ||||    
T  12302256 cttctatttatgtggggtccaggttaccatgtgtcagaattttgtgtggatgtaaaggatgtattgccacatggggtgatacatgtatcatcgctct 12302160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 143 - 335
Target Start/End: Original strand, 16096747 - 16096940
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| | || |||||| ||||||||||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T
Q  243 ctatttgtgt-ggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||| || ||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  16096847 ctacttatgtgggggtctaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgatgtggtacatgtatcatcactc 16096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 335
Target Start/End: Complemental strand, 43335865 - 43335671
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||| ||||||| | ||  |||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  43335865 aaggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatc 43335766  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||    
T  43335765 ttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtatattgccacatggggtggtacatgtatcatcactc 43335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 185 - 334
Target Start/End: Complemental strand, 42849916 - 42849768
Alignment:
Q  185 tacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgt 284  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  42849916 tacaccccatgtattagggatattttgataagttcatctcacaaccacactttat-ttctatttgtgtggggtccaagttgccacgtgtcagaattttgt 42849818  T
Q  285 gtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42849817 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 144 - 338
Target Start/End: Complemental strand, 34817875 - 34817681
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||||||||||||||||||||  |||  ||||| |||||||||||||||| | || | | |||||||||||||||||||| ||||||||||| |||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctcttc 34817776  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||  ||| |||| |||||||| |||||||||||||| ||||||||| ||| | |||||||||||||   |||||||||||||||||||||    
T  34817775 tatttgtacgggatccaggttgccacatgtcagaattttgtatgggtgtaaggggagcattgccacatgggggtgtacatgtatcatcactcttt 34817681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 143 - 302
Target Start/End: Complemental strand, 13780835 - 13780676
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||| |||||  ||  |||  ||||| |||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 302  Q
    |||||| ||||||||||| |||||||| |||||||||||||| | |||||||||||||||    
T  13780735 ctatttatgtggggtccaggttgccacatgtcagaattttgtataggtgtaaagggtgta 13780676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 142 - 330
Target Start/End: Original strand, 42026766 - 42026956
Alignment:
Q  142 aggaaaatgttacatgaacaccc--ttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||  ||  ||| ||||  |||||||||| |||  | |||||||||||||||| |||||||||||| ||| ||||||| |    
T  42026766 aggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacactttct 42026865  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcat 330  Q
     |||||||||||||||||| | ||||| |  |||||||||||||||||||||||| ||||||||||||||||||    |||||||||||||    
T  42026866 tttctatttgtgtggggtctaggttgcaagatgtcagaattttgtgtgggtgtaaggggtgtattgccacatggaggtgtacatgtatcat 42026956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 39149354 - 39149201
Alignment:
Q  181 attgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaatt 280  Q
    |||||||| || ||||||||| ||||||||||||| |||||| || ||| |||||||||||| ||||||||| ||||| |  || |||||| ||| ||||    
T  39149354 attgtacatcctatgtattagagatattttggtaagttcatcccacaactacactttatcttttatttgtgt-gggtctaaattaccacgtctcataatt 39149256  T
Q  281 ttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  39149255 ttgtgtgggtgtaaaaggtgtattaccacatggg-tggtacatgtatcatcactct 39149201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 145 - 284
Target Start/End: Complemental strand, 8896681 - 8896542
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||||||  |||  |||  ||||||||||||| ||  | |||| |||||||||||||||||||||| || |||||||| | ||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacactttcttttct 8896582  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgt 284  Q
    ||||||||| ||| || |||||||| ||||||||||||||    
T  8896581 atttgtgtgaggttcaggttgccacatgtcagaattttgt 8896542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 43114554 - 43114656
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||   || ||||||| ||||||||||||||| |||||||| |||||||||| ||||||||| ||||| ||||| |    
T  43114554 aaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttct 43114653  T
Q  240 ctt 242  Q
    |||    
T  43114654 ctt 43114656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 33229303 - 33229381
Alignment:
Q  145 aaaatgttacatgaacacccttat-ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatc 222  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 11825752 - 11825655
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||   || ||||||| ||||||||||||||| |||||||| |||||||||| ||||||||| || || ||||| ||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctt 11825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 16803966 - 16804067
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||   || ||||||| |||||||| |||||| |||||||| |||||| ||| ||||||||| ||||| ||||| ||    
T  16803966 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctc 16804065  T
Q  241 tt 242  Q
    ||    
T  16804066 tt 16804067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 16843248 - 16843349
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||   || ||||||| |||||||| |||||| |||||||| |||||| ||| ||||||||| ||||| ||||| ||    
T  16843248 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctc 16843347  T
Q  241 tt 242  Q
    ||    
T  16843348 tt 16843349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 344
Target Start/End: Complemental strand, 34895845 - 34895640
Alignment:
Q  139 gaaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacacttta 238  Q
    ||||||||| ||||||||||||||| ||   ||  |||||| ||||||||||||||| |||||||| || ||||||||||||||||| || || ||||||    
T  34895845 gaaaggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatacttta 34895746  T
Q  239 tcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    ||||  || |        |     ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   |||||||||||| ||||||||    
T  34895745 tctttcatctcctctcccttttccttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcttt 34895646  T
Q  339 ttgaaa 344  Q
    | ||||    
T  34895645 tggaaa 34895640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 41282072 - 41281975
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||   || ||||||| ||||||||||||||| |||||||| |||||| ||| ||||||||| ||||| ||||| ||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctt 41281975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 12415560 - 12415461
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || ||||||  ||||||||||||||| |||||||| |||||||||| || |||||| ||||| ||||| ||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 12427620 - 12427521
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || ||||||  ||||||||||||||| |||||||| |||||||||| || |||||| ||||| ||||| ||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 18491704 - 18491798
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactt 236  Q
    |||||||||||||||||||||||||   || ||||||| |||||||||| |||| |||| | | |||||||||||||||||||| ||||| ||||    
T  18491704 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatactt 18491798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 966936 - 966835
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||   || ||||||| ||||||||||||||| |||| | |  ||||||||||||||||||| || || ||||| ||    
T  966936 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctc 966837  T
Q  241 tt 242  Q
    ||    
T  966836 tt 966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 40613913 - 40613976
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  40613913 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 40613976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 18491825 - 18491902
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    ||||||| ||| || |||||||||||||||||  ||||||||||||||||||   |||||||||||| ||||||||||    
T  18491825 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcttttt 18491902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 41281954 - 41281877
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    ||||||| |||||| |||||||||||||||||  |||||||||||| |||||   |||||||||||| ||||||||||    
T  41281954 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatcaccactcttttt 41281877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 6518474 - 6518398
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| |||||| |||||||||||||||||| ||||||||| |||||||    |||||||||||| |||||||||    
T  6518474 ttgccacatgtcaggattttgtgtgggtgtaaaaggtgtattgacacatggaggtgtacatgtatcaccactctttt 6518398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 6518566 - 6518487
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctca 225  Q
    ||||||||||||||||||| ||| | | ||||| | ||||||||||||||| |||||||| |||||||||| |||||||||    
T  6518566 aaaatgttacatgaacacctttaat-catacactctattgtacaccccatgcattagggacattttggtaatttcatctca 6518487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 11825634 - 11825562
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   |||||||||||| |||||    
T  11825634 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggggatgtacatgtatcaccactc 11825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 12415432 - 12415368
Alignment:
Q  271 tgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||| |||||  |||||||||||||||||||  |||||||||||| |||||    
T  12415432 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12415368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 12427492 - 12427428
Alignment:
Q  271 tgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||| |||||  |||||||||||||||||||  |||||||||||| |||||    
T  12427492 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 12531643 - 12531567
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| |||||| |||||||||||||||||  |||||||||||| ||||    ||||||||||||||||||||||    
T  12531643 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatggaggtgtacatgtatcatcactctttt 12531567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 4452012 - 4451951
Alignment:
Q  181 attgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  4452012 attgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctt 4451951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 43114677 - 43114754
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    ||||||| |||||| |||||||||||||||||  |||||||||||||||| |   |||||||||||| ||||| ||||    
T  43114677 ttgccacttgtcaggattttgtgtgggtgtaagaggtgtattgccacatgagggtgtacatgtatcaccactcatttt 43114754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 966814 - 966742
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| |||||| |||||||||||||||||  |||||||| |||||||||   |||||||||||| |||||    
T  966814 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtatttccacatggggatgtacatgtatcaccactc 966742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 4299518 - 4299438
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctca 225  Q
    ||||||||| ||||||||||||   || ||||||| ||||||||| ||||| ||||  || ||||||||||||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctca 4299438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 38273159 - 38273215
Alignment:
Q  253 ggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 308  Q
    ||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||    
T  38273159 ggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgcca 38273215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 7070418 - 7070505
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccac 232  Q
    ||||||||||||||||||||||  ||| |||| |||||||||  | |||| |||| |||| |||||| ||||||||||| | ||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaaccac 7070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 14285675 - 14285758
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctca 225  Q
    |||||||| |||||  |||||||||   || ||||||| ||||||||||| || |||||  |||||||||||||||||||||||    
T  14285675 aggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 7465746 - 7465808
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 308  Q
    |||||||||||||| ||  | |||||||||| |||||||||||||| ||||||||||||||||    
T  7465746 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 7465808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 16804088 - 16804160
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| || || ||   |||||||||||| |||||    
T  16804088 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16804160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 16843370 - 16843442
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| || || ||   |||||||||||| |||||    
T  16843370 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16843442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 17820014 - 17820078
Alignment:
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||||||||||||| ||  |||| ||||||| |||||||||||||| || ||||||||||||||    
T  17820014 tttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 17820078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 29739406 - 29739358
Alignment:
Q  289 gtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  29739406 gtgtaaagggtatattgccacatatgatggtacatgtatcattactctt 29739358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 2997498 - 2997561
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  2997498 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 2997561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 28863544 - 28863481
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  28863544 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 28863481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 42257282 - 42257219
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||||| ||||||||||||| |||| ||||||||| ||| | |||||||||||    
T  42257282 ttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccac 42257219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 9058548 - 9058506
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  9058548 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 9058506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 4299400 - 4299351
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatg 312  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||    
T  4299400 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatg 4299351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 17473088 - 17473047
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 308  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  17473088 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 17473047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 27864772 - 27864728
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccacat 311  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||    
T  27864772 acgtgtcagatttttgtgtggatgtcaaagggtgtattgccacat 27864728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 144 - 338
Target Start/End: Original strand, 112656 - 112850
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttc 243  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 112755  T
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  112756 tatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 2e-77; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 18033980 - 18034174
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  18033980 aaggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatc 18034079  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  18034080 ttctatttgtgtggggtccaggttgccacgtgtcagaattttatatgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactc 18034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 143 - 336
Target Start/End: Complemental strand, 2614749 - 2614556
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  2614649 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactct 2614556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 33801467 - 33801667
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  33801467 aaggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatc 33801566  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| |||    
T  33801567 ttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacatgggaaggtacatatatcatcactctattt 33801666  T
Q  341 g 341  Q
    |    
T  33801667 g 33801667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 143 - 335
Target Start/End: Complemental strand, 41334763 - 41334571
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  ||| |||||| |||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  41334663 ctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 143 - 310
Target Start/End: Original strand, 22512305 - 22512472
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 22512404  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccaca 310  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22512405 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccaca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 140 - 337
Target Start/End: Original strand, 7617130 - 7617327
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  7617130 aaaggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 7617229  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||| |||||| || | |||| ||| |||||||||||||||| |||||||| |||||||||||||||||| || |||||||||||||||||||    
T  7617230 cttctatttatgtgggatctaagttgtcacatgtcagaattttgtgttggtgtaaaaggtgtattgccacatggggtgatacatgtatcatcactctt 7617327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 140 - 336
Target Start/End: Original strand, 5256992 - 5257188
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||| |||||||||||| |||||| ||  ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  5256992 aaagaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttat 5257091  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||| ||||||||| |  ||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  5257092 cttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactct 5257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 141 - 329
Target Start/End: Original strand, 38470577 - 38470765
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    |||||||||||||||| |||||||||  ||| ||||  |||||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||||    
T  38470577 aaggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatc 38470676  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    |||||||| |||||||||||  || |||||| |||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||    
T  38470677 ttctatttatgtggggtccagattaccacgtatcagaattttatgtgggtgtaaagggtgtattgccatatgaggtggtacatgtatca 38470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 145 - 337
Target Start/End: Complemental strand, 25915085 - 25914902
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||| |||||||||  ||||||| |||  ||||||||| ||        ||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattaga-atatttttgtaggttcatctcataa--------tatcttct 25914995  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  25914994 atttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactctt 25914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 295
Target Start/End: Complemental strand, 39122486 - 39122381
Alignment:
Q  190 cccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtggg 289  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||  | |||||||| ||||||||| ||||||||     
T  39122486 cccatgtattaggaatattttggtaaattcatctcacaactacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtgga 39122387  T
Q  290 tgtaaa 295  Q
    ||||||    
T  39122386 tgtaaa 39122381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 230 - 338
Target Start/End: Complemental strand, 39122369 - 39122261
Alignment:
Q  230 cacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    ||||||||||||||||||||||||||||  | |||||||| ||||||||| |||||||| |||||| | | ||||| |||||||| ||||||||||||||    
T  39122369 cacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcacatggggtggtacatgtatca 39122270  T
Q  330 tcactcttt 338  Q
     ||||||||    
T  39122269 ccactcttt 39122261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 33855143 - 33855071
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaa 215  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| | ||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 32473494 - 32473395
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||   || ||||||  |||||||||| |||| ||||||||||||||||||| ||||||||| ||||| ||||| ||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctt 32473395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 17208073 - 17208173
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    ||||||||||||| |||||||||||   || |||||   ||||||||||||||| |||| ||| |||||||||||||||||||| ||||| ||||| |||    
T  17208073 aggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctct 17208172  T
Q  242 t 242  Q
    |    
T  17208173 t 17208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 30622821 - 30622720
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||| ||||   || ||||||| |||||| | |||||| |||| ||||||||||||||||| |||||| ||||| ||||| |    
T  30622821 aaaggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcacaaccatactttct 30622723  T
Q  240 ctt 242  Q
    |||    
T  30622722 ctt 30622720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 28177865 - 28177801
Alignment:
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||| |||||||||||  |||||||||||| |||||||||||||| |||||||||||||||||    
T  28177865 tttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 28177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 30622699 - 30622627
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||| ||||| ||||||||||||||||||  ||||||||||||||||||   |||||||||||| |||||    
T  30622699 ttgccacatgtcaaaattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 30622627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 32473374 - 32473303
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcact 334  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||||    |||||||||||| ||||    
T  32473374 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccact 32473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 6679788 - 6679724
Alignment:
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||| |||||||||||  |||||||||||| |||||||||||||| ||| |||||||||||||    
T  6679788 tttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccac 6679724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 2252179 - 2252242
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  2252179 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 2252242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 3921276 - 3921339
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  3921276 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 3921339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 18520895 - 18520958
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  18520895 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 18520958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 26720605 - 26720542
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||| ||| ||||||| ||||||||||||| |||| ||| |||| ||||||||||||||||||    
T  26720605 ttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccac 26720542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 26990354 - 26990291
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||| ||| ||||||| ||||||||||||| |||| ||| |||| ||||||||||||||||||    
T  26990354 ttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccac 26990291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 2740342 - 2740300
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  2740342 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 2740300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 42414334 - 42414376
Alignment:
Q  268 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  42414334 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 42414376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 15409621 - 15409666
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt 292  Q
    ||||| ||||||||||| || |||||||||| ||||||||||||||    
T  15409621 ttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgt 15409666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 17208194 - 17208263
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatca 332  Q
    ||||||| |||||| ||||||||||| |||||  ||||||||| ||||| ||   |||||||||||||||    
T  17208194 ttgccacatgtcaggattttgtgtggatgtaagaggtgtattgtcacataggggtgtacatgtatcatca 17208263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 8e-77; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 143 - 340
Target Start/End: Complemental strand, 5811024 - 5810827
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatctt 5810925  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttttt 340  Q
    |||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5810924 ctatttgtgtggggtccaagttgccacatgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttttt 5810827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 143 - 336
Target Start/End: Complemental strand, 24001112 - 24000919
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  24001012 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactct 24000919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 143 - 335
Target Start/End: Complemental strand, 42538531 - 42538339
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42538432  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  42538431 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactc 42538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 169 - 335
Target Start/End: Complemental strand, 32029891 - 32029725
Alignment:
Q  169 ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgcca 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||    
T  32029891 ttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatcttctatttatgtggggtccaagttgcca 32029792  T
Q  269 cgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  32029791 cgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatgactc 32029725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 140 - 329
Target Start/End: Original strand, 5015392 - 5015581
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    ||||||||||||||||||||||| |||  || |||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  5015392 aaaggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttat 5015491  T
Q  240 cttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatca 329  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  5015492 cttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgagtgtaaaaggtgtattgccacatggggtggtacatgtatca 5015581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 142 - 339
Target Start/End: Original strand, 35069720 - 35069917
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    ||||||||||||||||||||| |||  |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  35069720 aggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatct 35069819  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||| | |||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  35069820 tctatttatgtgaggtccaagttgccacgtgtcagaattttgtgtagatgtaaaggatatattgccacataggatggtacatgtatcatcactctttt 35069917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 143 - 336
Target Start/End: Original strand, 42972852 - 42973045
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||| |||||| ||||  ||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42972951  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||    
T  42972952 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacataggatagtacatgtatcattactct 42973045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 145 - 338
Target Start/End: Complemental strand, 16180454 - 16180262
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||| ||  ||||||||||| ||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatcttct 16180356  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactcttt 338  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  16180355 atttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactcttt 16180262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 145 - 336
Target Start/End: Complemental strand, 44417032 - 44416841
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||| | ||  || |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 44416933  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||||||||||    
T  44416932 atttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactct 44416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 145 - 335
Target Start/End: Complemental strand, 43343722 - 43343532
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||| | ||  || |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 43343623  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||| | ||||||||||||||||||||    
T  43343622 atttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactc 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 145 - 339
Target Start/End: Original strand, 44326180 - 44326374
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||||||  ||| |||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||| |||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatct 44326279  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    |||| |||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  44326280 atttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactctttt 44326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 146 - 335
Target Start/End: Complemental strand, 26898499 - 26898310
Alignment:
Q  146 aaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttcta 245  Q
    |||||||||||||||||| ||  ||| ||||||| ||||||||  ||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacactttatattcta 26898400  T
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  26898399 tttgtgtggggtccaggttaccacgtgtcagaattttatgtgggtgtaaaaggtgtattgccacataggatggtacatgtatcaccactc 26898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 41861672 - 41861868
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtatta--gggatattttggtaaattcatctcaaaaccacacttta 238  Q
    ||||||||||||||||||||||||||  ||| ||||||| ||| ||||||| ||||||||  | ||||||||||||| || |||||| ||||||||||||    
T  41861672 aaggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacacttta 41861771  T
Q  239 tcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  41861772 tcttctatttgtatggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 159 - 332
Target Start/End: Complemental strand, 27393344 - 27393171
Alignment:
Q  159 acacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtc 258  Q
    ||||||||  |||||||| || ||||||||| | |||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtc 27393245  T
Q  259 catgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatca 332  Q
    || |||||| | |||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  27393244 caggttgcctcatgtcagaattttatgtgggtgtaaaggatgtattgccacatggggtggtacatgtatcatca 27393171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 38160649 - 38160508
Alignment:
Q  173 tacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttgccacgtg 272  Q
    ||||| |||||||||||||||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||    
T  38160649 tacactccattgtacaccccatgtattagggatattttagtaacttcatctcacaactacactttatcttctatttatgtggggtccaagttgccacgtg 38160550  T
Q  273 tcagaattttgtgtgggtgtaaagggtgtattgccacatggg 314  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  38160549 tcagaattttgtgtgggtgtaaggggtgtattgccacatggg 38160508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 145 - 335
Target Start/End: Original strand, 10573751 - 10573941
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    |||||||||||| |||||||||  ||| |||| || |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatcttct 10573850  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||| ||||||||| |  ||||||| | |||||||||| |||||||||||||| | ||||| |||||| | |||||||||||||| |||||    
T  10573851 atttatgtggggtcaagattgccacatatcagaattttatgtgggtgtaaaggatatattgtcacatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 145 - 336
Target Start/End: Complemental strand, 4638297 - 4638106
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatcttct 244  Q
    ||||||||||||||||||| ||  ||| ||||| | |||||||||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatcttct 4638198  T
Q  245 atttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    |||||||||||||| | ||| |||||||||||||| |||| ||| |||||||||||||||| ||| | || |||||||||||||| ||||||    
T  4638197 atttgtgtggggtctaggttaccacgtgtcagaatcttgtatggatgtaaagggtgtattgtcacgtagggtggtacatgtatcaccactct 4638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 143 - 337
Target Start/End: Original strand, 45326020 - 45326214
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||| |||||||| |||||| ||  ||| |||| | ||||||||||||||| |||||||||||||||||||| ||||||||| || |||||||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatctt 45326119  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    |||||| |||||||||||   | |||| |||||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||| |||||||    
T  45326120 ctatttatgtggggtccagactaccacctgtcagaattttatgtgggtgtaaatggtgtattgtcacatggggtggtacatgtatcaccactctt 45326214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 9216301 - 9216495
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||  |||||| | || ||||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||| |||||||    
T  9216301 aggaaaatgttacatgaacaccctttattcctatatcctattgtacaccc-atgcattagagatattttggtaagttcatctcacaaccacattttatct 9216399  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||||||||||||  | |||||| | |||||||||||||||||| |||||| ||||||||| |||||||| ||||| || ||||||| |||||    
T  9216400 tctatttgtgtggggtttaagttgccgcatgtcagaattttgtgtggatgtaaaaggtgtattgtcacatggggtggtatatatatcatccctctt 9216495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 142 - 310
Target Start/End: Original strand, 43317442 - 43317610
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||| ||  ||| |||||| ||||||||| || |||  |||||||||||||| ||||||||||||| || |||||||  |||    
T  43317442 aggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttactct 43317541  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccaca 310  Q
    ||||||||||||||||| |  ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  43317542 tctatttgtgtggggtctagattgccacatgtcagaattttgtgtgggtgtaaggggtgtattgccaca 43317610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 142 - 310
Target Start/End: Complemental strand, 5194332 - 5194164
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||| ||  ||| |||||| |||||||||||| |||| ||| |||||||||| ||||||||||||| || |||||||  |||    
T  5194332 aggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactct 5194233  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccaca 310  Q
    ||||||||||||||||| |  ||||||| ||||| |||||||||||||||||| || ||||||||||||    
T  5194232 tctatttgtgtggggtctagattgccacatgtcaaaattttgtgtgggtgtaagggttgtattgccaca 5194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 304
Target Start/End: Complemental strand, 24280697 - 24280535
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    ||||||||||||| |||||||||||  ||| ||||||| ||| |||| |||||| | |||  |||||||||||||||||||||| || |||||||| |||    
T  24280697 aggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctct 24280598  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtatt 304  Q
    ||||||||||||||||||| |||||||  | ||||||||||||| | ||||||  ||||||||    
T  24280597 tctatttgtgtggggtccaagttgccatatatcagaattttgtgcgagtgtaagaggtgtatt 24280535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 47279740 - 47279628
Alignment:
Q  227 aaccacactttatcttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgta 326  Q
    |||||||||||||||||||||| | | || ||||  || |||| | |||||||||| ||||||| |||||||||||||| || |||||||||||||||||    
T  47279740 aaccacactttatcttctatttatataggatccagattaccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtacatgta 47279641  T
Q  327 tcatcactctttt 339  Q
    ||| |||||||||    
T  47279640 tcaccactctttt 47279628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 31513287 - 31513386
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||||||||| |||   || ||||||| |||||| |||||||| |||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 31513386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 40236916 - 40237007
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaacca 231  Q
    |||||||||||||||||||||||||||   || |||| || ||||||||||||||| |||||||| |||||||||| ||||||||| |||||    
T  40236916 aaaggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaacca 40237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 31408732 - 31408634
Alignment:
Q  144 gaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||||||||||||   || ||||| | |||||||| |||||| |||| |||||||||||||||||||| ||| ||||| ||||| ||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctt 31408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 40237039 - 40237112
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 336  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   |||||||||||| ||||||    
T  40237039 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 40237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 33384867 - 33384970
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacacccc-attgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacacttta 238  Q
    |||||||||||||||||||||| | ||   || |||||||| |||||| || ||||| |||||||| |||||||||||||||||||| || || |||||     
T  33384867 aaaggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttc 33384966  T
Q  239 tctt 242  Q
    ||||    
T  33384967 tctt 33384970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 46374813 - 46374876
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||    
T  46374813 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccac 46374876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 27535334 - 27535232
Alignment:
Q  140 aaaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttat 239  Q
    |||||||||||||||||||||||||||   || ||||| | ||||||||| |||||| |||  || |||||||||| ||||||||| ||| | ||||| |    
T  27535334 aaaggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttct 27535235  T
Q  240 ctt 242  Q
    |||    
T  27535234 ctt 27535232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 31408613 - 31408537
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| |||||| ||||| |||||||||||  ||||||||| ||||||||   |||||||||||| |||||||||    
T  31408613 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgtcacatgggggtgtacatgtatcaccactctttt 31408537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatatttt 210  Q
    ||||||||||||||||||||  ||   || |||| || ||||||||||||||||||||||||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 32564434 - 32564500
Alignment:
Q  244 tatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||| ||||||||| | ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  32564434 tatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 32564500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 35522965 - 35522902
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    ||||| ||| ||||| | ||||||||||||| ||||||||||||| |||| |||||||||||||    
T  35522965 ttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccac 35522902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 36361924 - 36361987
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||||||||||| ||  | |||||||||| |||||||||||||| ||||| |||||||||||    
T  36361924 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccac 36361987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 27535211 - 27535161
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgg 313  Q
    ||||||| |||||||||||||||||| |||||  | |||||||||||||||    
T  27535211 ttgccacatgtcagaattttgtgtggatgtaagagatgtattgccacatgg 27535161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 38267129 - 38267064
Alignment:
Q  247 ttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccacat 311  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| ||||||||||||| |||||    
T  38267129 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacat 38267064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 31513407 - 31513483
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| |||||| ||||||||| | |||||  |||||||||||||||  |   |||||||||||| |||||||||    
T  31513407 ttgccacatgtcaggattttgtgtagatgtaagaggtgtattgccacataagggtgtacatgtatcaccactctttt 31513483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 33384991 - 33385067
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 339  Q
    ||||||| | |||| ||||||| |||||||||  ||||||||| ||||||||    ||||||||||| |||||||||    
T  33384991 ttgccacatatcaggattttgtatgggtgtaagaggtgtattgtcacatgggggtttacatgtatcaccactctttt 33385067  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 35137623 - 35137559
Alignment:
Q  246 tttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 309  Q
    |||||| |||||||| ||  | |||||| ||| |||||||||||||| |||||||||||||||||    
T  35137623 tttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccac 35137559  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 46033831 - 46033875
Alignment:
Q  266 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 309  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||    
T  46033831 ccacgtgtcagatttttatgtgggtgttaaagggtgtattgccac 46033875  T

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Target: scaffold0187 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 142 - 335
Target Start/End: Complemental strand, 14289 - 14097
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||  || ||||||||||||||||| || |||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  14289 aggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatct 14190  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  14189 tctatttgtgt-gggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 14097  T

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Target: scaffold0187; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 142 - 335
Target Start/End: Complemental strand, 24617 - 24425
Alignment:
Q  142 aggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatct 241  Q
    |||||||||||||||||||||||||  || ||||||||||||||||| || |||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  24617 aggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatct 24518  T
Q  242 tctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24517 tctatttgtgt-gggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 24425  T

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Target: scaffold0385 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 11249 - 11443
Alignment:
Q  141 aaggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatc 240  Q
    ||||||||||| |||||||||| |||  ||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  11249 aaggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatc 11348  T
Q  241 ttctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  11349 ttctattgatgtggggtccaagttgctacgtgtcagaattttgtgtaggtgtaaatagtgtattgccacatgggatggtacatgtatcatcactc 11443  T

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Target: scaffold0157 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 335
Target Start/End: Complemental strand, 23521 - 23329
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||| ||||||||||||  ||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||| | || |||||||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 23422  T
Q  243 ctatttgtgtggggtccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 335  Q
    ||||||||||| ||| ||  ||||||||||| |||||||||||||||||||||  |||||||| |||||||| |||| |||||||||| ||||    
T  23421 ctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtcacatggggtggtgcatgtatcattactc 23329  T

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Target: scaffold0003 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 45817 - 45720
Alignment:
Q  145 aaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    ||||||||||||||||||||||   || ||||||| |||||||| || |||||||| |||||||||||||||||||||||| ||||| ||||| ||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T

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Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 45699 - 45625
Alignment:
Q  263 ttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctt 337  Q
    ||||||| |||||| ||||| |||||||||||  ||||||||||||||||||   |||||||||||| |||||||    
T  45699 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 45625  T

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Target: scaffold0100 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 35556 - 35457
Alignment:
Q  143 ggaaaatgttacatgaacacccttatttcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctcaaaaccacactttatctt 242  Q
    |||||||||||||| |||||| ||   || ||||||  ||||||||||||||| |||||||| || ||||||||||||||||| ||||| ||||| ||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctt 35457  T

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Target: scaffold0100; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 35421 - 35369
Alignment:
Q  278 attttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcat 330  Q
    ||||||| |||||||||  ||||||||||||||||||   |||||||||||||    
T  35421 attttgtatgggtgtaagaggtgtattgccacatgggggtgtacatgtatcat 35369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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