View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14556_low_16 (Length: 327)

Name: NF14556_low_16
Description: NF14556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14556_low_16
NF14556_low_16
[»] chr5 (62 HSPs)
chr5 (138-283)||(132019-132168)
chr5 (1-108)||(132200-132306)
chr5 (1-108)||(35362069-35362175)
chr5 (1-108)||(15178941-15179047)
chr5 (1-108)||(32994298-32994404)
chr5 (138-254)||(25363241-25363358)
chr5 (138-259)||(35361917-35362038)
chr5 (1-104)||(25363103-25363205)
chr5 (141-270)||(35362971-35363101)
chr5 (1-108)||(3539748-3539854)
chr5 (141-260)||(32936203-32936323)
chr5 (138-254)||(32994165-32994279)
chr5 (141-254)||(18485662-18485776)
chr5 (201-259)||(32458076-32458134)
chr5 (1-107)||(20769800-20769905)
chr5 (1-107)||(40834024-40834129)
chr5 (149-254)||(7145775-7145881)
chr5 (141-254)||(40834164-40834278)
chr5 (1-108)||(2094724-2094830)
chr5 (138-254)||(15178792-15178909)
chr5 (162-254)||(19558122-19558215)
chr5 (138-254)||(30370514-30370631)
chr5 (1-107)||(13600598-13600703)
chr5 (144-268)||(3539586-3539712)
chr5 (157-254)||(27843026-27843124)
chr5 (162-259)||(35362167-35362265)
chr5 (149-261)||(2094571-2094684)
chr5 (162-254)||(15179039-15179132)
chr5 (157-254)||(30370756-30370853)
chr5 (201-254)||(2094862-2094915)
chr5 (1-107)||(7145626-7145731)
chr5 (1-107)||(18485812-18485917)
chr5 (141-254)||(20769940-20770055)
chr5 (162-254)||(25363019-25363111)
chr5 (201-254)||(32994444-32994497)
chr5 (149-267)||(13600434-13600555)
chr5 (157-259)||(40833934-40834037)
chr5 (157-254)||(32936450-32936548)
chr5 (49-108)||(35363135-35363194)
chr5 (157-254)||(3539841-3539938)
chr5 (1-107)||(32936358-32936463)
chr5 (201-254)||(35363279-35363332)
chr5 (1-37)||(19558094-19558130)
chr5 (283-318)||(131964-131999)
chr5 (157-254)||(20769715-20769813)
chr5 (1-81)||(27843111-27843189)
chr5 (49-107)||(30370663-30370721)
chr5 (201-262)||(6541467-6541528)
chr5 (201-254)||(7145536-7145589)
chr5 (201-254)||(20339159-20339212)
chr5 (209-254)||(37093741-37093786)
chr5 (214-268)||(1643810-1643864)
chr5 (162-254)||(13600695-13600788)
chr5 (70-108)||(14274391-14274429)
chr5 (201-247)||(18485949-18485995)
chr5 (162-191)||(132298-132327)
chr5 (201-254)||(1098895-1098948)
chr5 (201-258)||(3294323-3294380)
chr5 (201-242)||(13455932-13455973)
chr5 (162-191)||(32994396-32994425)
chr5 (201-249)||(21258336-21258384)
chr5 (45-105)||(42854837-42854897)
[»] chr3 (67 HSPs)
chr3 (1-108)||(44506134-44506240)
chr3 (138-258)||(3612594-3612716)
chr3 (1-108)||(3612748-3612855)
chr3 (149-263)||(25847681-25847796)
chr3 (141-254)||(8851807-8851921)
chr3 (138-254)||(44506271-44506386)
chr3 (141-254)||(11121510-11121625)
chr3 (141-254)||(22975573-22975687)
chr3 (141-254)||(37513319-37513433)
chr3 (141-254)||(9296386-9296499)
chr3 (157-263)||(17574367-17574473)
chr3 (141-254)||(22316948-22317062)
chr3 (144-259)||(36229994-36230111)
chr3 (141-254)||(49621207-49621321)
chr3 (140-254)||(49711404-49711518)
chr3 (1-107)||(22316808-22316913)
chr3 (141-254)||(28829980-28830095)
chr3 (1-107)||(23043342-23043446)
chr3 (162-260)||(44506043-44506142)
chr3 (141-255)||(48433800-48433917)
chr3 (1-108)||(22975433-22975539)
chr3 (157-257)||(36229763-36229864)
chr3 (1-107)||(8851957-8852062)
chr3 (1-107)||(9296534-9296639)
chr3 (1-107)||(28829840-28829945)
chr3 (1-107)||(37513179-37513284)
chr3 (149-254)||(55009334-55009441)
chr3 (1-107)||(17574460-17574563)
chr3 (49-105)||(48433957-48434013)
chr3 (157-254)||(22316723-22316821)
chr3 (49-108)||(49711551-49711610)
chr3 (210-268)||(22975334-22975392)
chr3 (157-254)||(28829756-28829853)
chr3 (201-254)||(10687882-10687935)
chr3 (201-254)||(23043479-23043532)
chr3 (201-254)||(48434092-48434145)
chr3 (1-107)||(49621066-49621171)
chr3 (157-259)||(25847443-25847546)
chr3 (141-259)||(49984709-49984828)
chr3 (141-188)||(23043257-23043304)
chr3 (45-108)||(44991096-44991159)
chr3 (157-262)||(55009094-55009198)
chr3 (49-107)||(55009232-55009290)
chr3 (201-254)||(11220995-11221048)
chr3 (214-267)||(21016911-21016964)
chr3 (1-107)||(25847533-25847638)
chr3 (201-254)||(33491694-33491747)
chr3 (1-107)||(36229851-36229956)
chr3 (1-107)||(49984863-49984968)
chr3 (201-258)||(53712250-53712307)
chr3 (214-254)||(44664892-44664932)
chr3 (57-108)||(35850803-35850854)
chr3 (157-254)||(37513094-37513192)
chr3 (201-259)||(2862699-2862757)
chr3 (201-247)||(8852095-8852141)
chr3 (49-107)||(11121418-11121476)
chr3 (141-175)||(17574598-17574632)
chr3 (201-259)||(29434299-29434357)
chr3 (201-259)||(33491600-33491658)
chr3 (153-187)||(45278482-45278516)
chr3 (214-268)||(50710692-50710746)
chr3 (209-270)||(3612893-3612954)
chr3 (201-258)||(23043182-23043239)
chr3 (209-254)||(49711696-49711741)
chr3 (201-265)||(35747950-35748014)
chr3 (214-254)||(39778550-39778590)
chr3 (214-254)||(45567411-45567451)
[»] chr8 (65 HSPs)
chr8 (1-108)||(44379610-44379716)
chr8 (1-107)||(3691671-3691776)
chr8 (1-107)||(42123854-42123959)
chr8 (1-108)||(4128829-4128935)
chr8 (1-108)||(20223194-20223299)
chr8 (1-108)||(23792732-23792838)
chr8 (1-107)||(7899848-7899953)
chr8 (138-260)||(7899989-7900111)
chr8 (138-254)||(3691811-3691928)
chr8 (138-262)||(4128966-4129093)
chr8 (141-254)||(13327265-13327380)
chr8 (138-254)||(42123705-42123821)
chr8 (141-259)||(2968098-2968217)
chr8 (138-254)||(30928316-30928434)
chr8 (1-108)||(30928465-30928567)
chr8 (141-254)||(10682064-10682177)
chr8 (141-254)||(17875998-17876112)
chr8 (45-108)||(27523107-27523170)
chr8 (141-254)||(35482930-35483044)
chr8 (1-107)||(2967958-2968064)
chr8 (138-254)||(20223330-20223449)
chr8 (1-107)||(30904513-30904618)
chr8 (141-259)||(30904359-30904478)
chr8 (141-254)||(14577092-14577208)
chr8 (141-254)||(27912326-27912440)
chr8 (141-254)||(27958745-27958859)
chr8 (162-259)||(23792830-23792927)
chr8 (157-254)||(30904605-30904702)
chr8 (1-107)||(10682212-10682317)
chr8 (149-244)||(44379763-44379859)
chr8 (162-264)||(44379515-44379618)
chr8 (1-102)||(17844040-17844139)
chr8 (201-259)||(20178369-20178427)
chr8 (201-259)||(20223097-20223155)
chr8 (162-263)||(3691576-3691679)
chr8 (2-104)||(13327418-13327519)
chr8 (201-254)||(17844170-17844223)
chr8 (1-107)||(17875856-17875961)
chr8 (201-254)||(30928602-30928655)
chr8 (157-254)||(17875771-17875869)
chr8 (157-254)||(35482705-35482803)
chr8 (201-268)||(27523244-27523311)
chr8 (162-246)||(4128752-4128837)
chr8 (201-258)||(10682350-10682407)
chr8 (209-254)||(13795517-13795562)
chr8 (1-107)||(35482790-35482895)
chr8 (139-187)||(38464863-38464912)
chr8 (59-107)||(14577010-14577058)
chr8 (45-108)||(34873518-34873581)
chr8 (46-108)||(13795737-13795799)
chr8 (209-255)||(17866345-17866391)
chr8 (201-247)||(27912105-27912151)
chr8 (49-107)||(27912231-27912289)
chr8 (201-247)||(27958524-27958570)
chr8 (49-107)||(27958650-27958708)
chr8 (209-259)||(41850507-41850557)
chr8 (162-191)||(7899827-7899856)
chr8 (201-254)||(26938442-26938495)
chr8 (201-254)||(27712767-27712820)
chr8 (162-191)||(30928559-30928588)
chr8 (162-191)||(42123951-42123980)
chr8 (209-254)||(42124002-42124047)
chr8 (214-258)||(18806016-18806060)
chr8 (157-185)||(31231332-31231360)
chr8 (201-261)||(39198611-39198671)
[»] chr7 (65 HSPs)
chr7 (138-254)||(31894481-31894597)
chr7 (138-254)||(1511193-1511309)
chr7 (1-108)||(44307706-44307811)
chr7 (141-254)||(28408470-28408583)
chr7 (1-107)||(10878715-10878819)
chr7 (141-259)||(7417741-7417859)
chr7 (1-108)||(1511338-1511445)
chr7 (141-261)||(32178083-32178204)
chr7 (141-254)||(32523431-32523545)
chr7 (141-258)||(32832462-32832580)
chr7 (1-108)||(31894344-31894449)
chr7 (153-259)||(2933284-2933391)
chr7 (162-254)||(1511437-1511529)
chr7 (1-107)||(19305896-19306001)
chr7 (1-107)||(32523289-32523394)
chr7 (138-254)||(44307842-44307961)
chr7 (141-262)||(49114090-49114213)
chr7 (141-254)||(8437308-8437422)
chr7 (162-260)||(31894255-31894352)
chr7 (49-107)||(45746876-45746934)
chr7 (1-107)||(7417600-7417705)
chr7 (141-254)||(19305743-19305860)
chr7 (143-246)||(24986729-24986833)
chr7 (1-107)||(32177943-32178048)
chr7 (162-254)||(10878628-10878723)
chr7 (201-259)||(44307609-44307667)
chr7 (1-107)||(8437457-8437562)
chr7 (138-191)||(10878852-10878905)
chr7 (157-259)||(32177853-32177956)
chr7 (149-188)||(37453148-37453187)
chr7 (201-267)||(8437595-8437661)
chr7 (201-254)||(7417514-7417567)
chr7 (201-254)||(8869585-8869638)
chr7 (1-107)||(28408330-28408435)
chr7 (138-187)||(30060474-30060523)
chr7 (1-107)||(49113950-49114054)
chr7 (141-188)||(45746794-45746841)
chr7 (157-254)||(49113865-49113963)
chr7 (157-257)||(32523201-32523302)
chr7 (1-84)||(37453242-37453324)
chr7 (201-279)||(41922260-41922338)
chr7 (201-254)||(8871489-8871542)
chr7 (201-254)||(10878922-10878975)
chr7 (201-254)||(28408245-28408298)
chr7 (45-102)||(29226400-29226457)
chr7 (201-254)||(37453356-37453409)
chr7 (201-260)||(8806002-8806061)
chr7 (201-260)||(21455812-21455871)
chr7 (201-259)||(8522322-8522380)
chr7 (201-258)||(7173189-7173246)
chr7 (201-258)||(8522570-8522627)
chr7 (45-102)||(8869729-8869786)
chr7 (71-108)||(11032496-11032533)
chr7 (201-254)||(29099432-29099485)
chr7 (201-246)||(32832245-32832290)
chr7 (221-270)||(33323112-33323161)
chr7 (201-266)||(42391287-42391352)
chr7 (216-269)||(43267919-43267972)
chr7 (201-254)||(43575308-43575361)
chr7 (201-254)||(45747013-45747066)
chr7 (210-254)||(2731393-2731437)
chr7 (201-257)||(7149291-7149347)
chr7 (210-254)||(8114983-8115027)
chr7 (201-261)||(19125090-19125149)
chr7 (214-254)||(21733071-21733111)
[»] chr4 (92 HSPs)
chr4 (1-108)||(30799409-30799514)
chr4 (1-108)||(25297770-25297876)
chr4 (138-254)||(30055434-30055546)
chr4 (138-255)||(25297906-25298024)
chr4 (141-260)||(33692491-33692610)
chr4 (141-254)||(46143275-46143389)
chr4 (138-254)||(30799545-30799666)
chr4 (149-254)||(42856807-42856912)
chr4 (141-261)||(49621666-49621787)
chr4 (1-107)||(2686069-2686172)
chr4 (1-108)||(30055298-30055404)
chr4 (141-254)||(13294831-13294945)
chr4 (141-254)||(23163284-23163398)
chr4 (141-254)||(52690099-52690212)
chr4 (1-107)||(33369599-33369705)
chr4 (149-259)||(50161113-50161226)
chr4 (1-108)||(3546577-3546683)
chr4 (1-107)||(28458674-28458779)
chr4 (1-107)||(33692350-33692455)
chr4 (201-264)||(30799285-30799348)
chr4 (149-258)||(33369748-33369858)
chr4 (1-108)||(21053447-21053553)
chr4 (1-107)||(48419369-48419474)
chr4 (1-107)||(52690249-52690353)
chr4 (141-260)||(55742836-55742956)
chr4 (1-107)||(55140285-55140389)
chr4 (157-247)||(5260204-5260294)
chr4 (162-259)||(25297678-25297778)
chr4 (201-259)||(21053585-21053643)
chr4 (49-107)||(21707755-21707813)
chr4 (49-107)||(41689527-41689585)
chr4 (141-261)||(41689620-41689741)
chr4 (162-254)||(42857051-42857144)
chr4 (49-107)||(55742743-55742801)
chr4 (162-254)||(2685988-2686077)
chr4 (138-191)||(2686204-2686257)
chr4 (1-107)||(5260281-5260386)
chr4 (141-260)||(20930972-20931092)
chr4 (1-107)||(20931129-20931234)
chr4 (141-254)||(28458524-28458639)
chr4 (201-254)||(37872770-37872823)
chr4 (157-260)||(48419461-48419565)
chr4 (1-106)||(26202610-26202714)
chr4 (157-259)||(49621437-49621540)
chr4 (157-254)||(9526053-9526151)
chr4 (141-188)||(21707672-21707719)
chr4 (157-254)||(23163524-23163622)
chr4 (157-254)||(26202525-26202623)
chr4 (157-254)||(33692265-33692363)
chr4 (157-254)||(50161361-50161459)
chr4 (203-254)||(55742624-55742675)
chr4 (162-254)||(30055211-30055306)
chr4 (149-254)||(9525808-9525917)
chr4 (1-107)||(9525961-9526066)
chr4 (1-107)||(13294691-13294796)
chr4 (1-107)||(23163432-23163537)
chr4 (50-107)||(23549650-23549707)
chr4 (201-254)||(41689392-41689445)
chr4 (50-107)||(42856954-42857011)
chr4 (1-107)||(46143424-46143528)
chr4 (1-107)||(49621527-49621632)
chr4 (1-107)||(50977604-50977709)
chr4 (149-185)||(3546725-3546761)
chr4 (202-254)||(33369512-33369564)
chr4 (52-108)||(37872901-37872957)
chr4 (1-102)||(50161274-50161374)
chr4 (141-254)||(5260421-5260535)
chr4 (149-188)||(21053368-21053407)
chr4 (141-188)||(23549529-23549576)
chr4 (157-254)||(28458766-28458864)
chr4 (45-107)||(22335563-22335625)
chr4 (157-254)||(55140201-55140298)
chr4 (141-254)||(55140426-55140539)
chr4 (201-254)||(2686274-2686327)
chr4 (201-254)||(46143560-46143613)
chr4 (201-254)||(52690387-52690440)
chr4 (202-253)||(23963107-23963158)
chr4 (201-260)||(25331812-25331871)
chr4 (149-188)||(37872999-37873038)
chr4 (141-179)||(23549577-23549615)
chr4 (201-254)||(3546491-3546544)
chr4 (201-254)||(7067500-7067553)
chr4 (201-254)||(16019960-16020013)
chr4 (201-254)||(21360460-21360513)
chr4 (209-258)||(22335682-22335731)
chr4 (162-191)||(30799388-30799417)
chr4 (201-254)||(43914443-43914496)
chr4 (141-185)||(563566-563610)
chr4 (214-254)||(37068688-37068728)
chr4 (214-254)||(45655963-45656003)
chr4 (152-188)||(48419286-48419322)
chr4 (201-257)||(52537879-52537935)
[»] chr1 (59 HSPs)
chr1 (138-254)||(12115177-12115294)
chr1 (138-254)||(19897179-19897296)
chr1 (1-104)||(4969453-4969555)
chr1 (138-265)||(4969590-4969718)
chr1 (1-108)||(12115042-12115147)
chr1 (141-260)||(17985284-17985404)
chr1 (139-264)||(40290006-40290134)
chr1 (141-254)||(40902330-40902444)
chr1 (1-108)||(19897329-19897434)
chr1 (141-254)||(17611428-17611542)
chr1 (141-257)||(30002211-30002328)
chr1 (140-263)||(7113859-7113983)
chr1 (1-107)||(30562871-30562976)
chr1 (141-254)||(2026948-2027062)
chr1 (157-254)||(30002454-30002551)
chr1 (1-107)||(2026809-2026914)
chr1 (201-254)||(12114955-12115008)
chr1 (1-107)||(12139112-12139217)
chr1 (141-254)||(12139252-12139367)
chr1 (141-268)||(30563011-30563140)
chr1 (157-258)||(25780134-25780235)
chr1 (1-107)||(1549415-1549520)
chr1 (1-107)||(7114016-7114121)
chr1 (1-107)||(17611577-17611682)
chr1 (1-107)||(40902480-40902585)
chr1 (157-259)||(2026719-2026822)
chr1 (1-105)||(30002364-30002467)
chr1 (138-187)||(9172152-9172201)
chr1 (138-187)||(9180134-9180183)
chr1 (1-107)||(17985441-17985545)
chr1 (1-106)||(25780043-25780147)
chr1 (157-254)||(1549330-1549428)
chr1 (149-188)||(25779959-25779998)
chr1 (157-254)||(7114108-7114205)
chr1 (162-254)||(17611674-17611767)
chr1 (201-247)||(17985577-17985623)
chr1 (157-254)||(30562787-30562884)
chr1 (201-258)||(8828575-8828632)
chr1 (201-254)||(25779888-25779941)
chr1 (157-259)||(12139022-12139125)
chr1 (201-249)||(44067015-44067063)
chr1 (151-186)||(25267387-25267422)
chr1 (201-259)||(26874485-26874543)
chr1 (214-260)||(33471413-33471459)
chr1 (201-258)||(1501777-1501834)
chr1 (201-254)||(9172848-9172901)
chr1 (201-254)||(9180830-9180883)
chr1 (201-254)||(17504038-17504091)
chr1 (201-254)||(25267184-25267237)
chr1 (201-254)||(25267442-25267495)
chr1 (216-257)||(27546942-27546983)
chr1 (201-246)||(33128411-33128456)
chr1 (201-254)||(35521465-35521518)
chr1 (201-258)||(40902617-40902674)
chr1 (201-254)||(46283660-46283713)
chr1 (201-258)||(48970955-48971012)
chr1 (201-257)||(26874227-26874283)
chr1 (201-257)||(40770398-40770454)
chr1 (201-257)||(40934676-40934732)
[»] scaffold0311 (3 HSPs)
scaffold0311 (1-108)||(12685-12791)
scaffold0311 (138-254)||(12822-12939)
scaffold0311 (162-191)||(12664-12693)
[»] chr2 (62 HSPs)
chr2 (1-108)||(5547231-5547337)
chr2 (1-108)||(30337512-30337618)
chr2 (141-254)||(20363973-20364087)
chr2 (141-259)||(2318719-2318837)
chr2 (141-254)||(27360350-27360464)
chr2 (141-254)||(9319805-9319919)
chr2 (141-262)||(18916853-18916975)
chr2 (1-107)||(10044833-10044938)
chr2 (1-107)||(10108902-10109007)
chr2 (1-107)||(20364123-20364228)
chr2 (157-267)||(17845998-17846109)
chr2 (157-267)||(44536429-44536540)
chr2 (157-258)||(4261152-4261254)
chr2 (141-254)||(17846236-17846350)
chr2 (162-254)||(30337427-30337520)
chr2 (1-107)||(2318580-2318685)
chr2 (138-191)||(30337649-30337702)
chr2 (140-254)||(601557-601675)
chr2 (140-190)||(5547148-5547198)
chr2 (49-107)||(27360256-27360314)
chr2 (1-107)||(4261241-4261345)
chr2 (201-254)||(5547340-5547393)
chr2 (1-107)||(9319955-9320060)
chr2 (157-260)||(9320047-9320151)
chr2 (1-107)||(17846096-17846201)
chr2 (157-247)||(2318503-2318593)
chr2 (149-268)||(4261389-4261512)
chr2 (157-263)||(8322429-8322534)
chr2 (141-188)||(10109043-10109090)
chr2 (157-254)||(18916628-18916726)
chr2 (49-108)||(44536335-44536394)
chr2 (45-107)||(31769938-31770000)
chr2 (201-254)||(10044748-10044801)
chr2 (1-107)||(18916713-18916818)
chr2 (201-254)||(27360122-27360175)
chr2 (201-254)||(40710319-40710372)
chr2 (211-254)||(5547105-5547148)
chr2 (157-254)||(20364215-20364313)
chr2 (201-258)||(3889129-3889186)
chr2 (209-254)||(10108816-10108861)
chr2 (201-254)||(30337718-30337771)
chr2 (210-254)||(981784-981828)
chr2 (45-108)||(8236834-8236898)
chr2 (214-254)||(18449359-18449399)
chr2 (138-186)||(43055821-43055869)
chr2 (141-177)||(44536265-44536301)
chr2 (149-188)||(10044982-10045021)
chr2 (46-101)||(40044458-40044513)
chr2 (141-187)||(8322315-8322361)
chr2 (202-268)||(9912172-9912238)
chr2 (214-264)||(10714279-10714329)
chr2 (157-258)||(13862492-13862593)
chr2 (201-258)||(9911908-9911965)
chr2 (201-254)||(33274655-33274708)
chr2 (149-186)||(40044361-40044398)
chr2 (214-259)||(42950780-42950825)
chr2 (2-107)||(601418-601522)
chr2 (201-245)||(9992071-9992115)
chr2 (201-261)||(13421335-13421395)
chr2 (211-259)||(21251024-21251072)
chr2 (201-280)||(23926649-23926726)
chr2 (149-185)||(37084881-37084917)
[»] scaffold0347 (3 HSPs)
scaffold0347 (138-254)||(11943-12058)
scaffold0347 (1-108)||(12089-12195)
scaffold0347 (201-260)||(12223-12282)
[»] scaffold0029 (2 HSPs)
scaffold0029 (141-254)||(136919-137033)
scaffold0029 (1-107)||(137068-137171)
[»] scaffold0002 (2 HSPs)
scaffold0002 (141-254)||(330200-330314)
scaffold0002 (1-107)||(330349-330452)
[»] chr6 (34 HSPs)
chr6 (141-260)||(23068693-23068813)
chr6 (141-254)||(3218154-3218268)
chr6 (141-254)||(33595548-33595662)
chr6 (141-268)||(4243151-4243279)
chr6 (1-107)||(33595407-33595512)
chr6 (141-254)||(6755145-6755259)
chr6 (1-107)||(6755005-6755110)
chr6 (141-268)||(14763534-14763664)
chr6 (1-107)||(3218294-3218398)
chr6 (141-191)||(10810044-10810094)
chr6 (1-107)||(4243011-4243116)
chr6 (157-254)||(3218385-3218483)
chr6 (201-260)||(3922536-3922595)
chr6 (157-254)||(3922783-3922881)
chr6 (157-254)||(4242926-4243024)
chr6 (157-254)||(33595322-33595420)
chr6 (1-84)||(14763406-14763488)
chr6 (2-108)||(10810128-10810232)
chr6 (214-254)||(10810278-10810318)
chr6 (1-107)||(3922691-3922796)
chr6 (201-258)||(22569021-22569078)
chr6 (1-107)||(23068850-23068955)
chr6 (157-261)||(23068942-23069045)
chr6 (201-265)||(21926056-21926120)
chr6 (202-253)||(7808445-7808496)
chr6 (201-252)||(10027125-10027176)
chr6 (201-259)||(3105862-3105920)
chr6 (201-254)||(9220106-9220159)
chr6 (201-254)||(9546669-9546722)
chr6 (201-254)||(10026143-10026196)
chr6 (201-242)||(13178481-13178522)
chr6 (201-254)||(28852191-28852244)
chr6 (201-254)||(30121586-30121639)
chr6 (214-262)||(8129804-8129852)
[»] scaffold1577 (3 HSPs)
scaffold1577 (141-191)||(940-990)
scaffold1577 (214-258)||(1174-1218)
scaffold1577 (45-108)||(1024-1087)
[»] scaffold0053 (1 HSPs)
scaffold0053 (141-185)||(15112-15156)


Alignment Details
Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 132168 - 132019
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn----taaaggatgaaaatgttacctaaaattaaatta 233  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||              ||||||| |||||||||||||||||||||||||    
T  132168 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttaaaaaaaaaaaaagataaaggacgaaaatgttacctaaaattaaatta 132069  T
Q  234 agggactaattgtgtaattttacctttaatttattttgttaaaatatatt 283  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  132068 agggattaattgtgtaattttacctttaatttattttgttaaaatatatt 132019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 132306 - 132200
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  132306 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 132208  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  132207 ttgatgaa 132200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35362175 - 35362069
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35362175 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 35362077  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  35362076 ttgatgaa 35362069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15179047 - 15178941
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  15179047 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttcttgactagtatgatgaagatttgagtttgtctatgagt 15178949  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  15178948 ttgatgaa 15178941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32994404 - 32994298
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  32994404 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagt 32994306  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  32994305 ttgatgaa 32994298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 25363241 - 25363358
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||| |||||||||||||||||    
T  25363241 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaaattaagg 25363340  T
Q  237 gactaattgtgtaatttt 254  Q
     |||||||||||||||||    
T  25363341 aactaattgtgtaatttt 25363358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 35362038 - 35361917
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||| || |||||||||||||||| |||| ||||||     
T  35362038 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaacaaaaaaaaaatgacgaaaatgttacctaaatttaagttaagga 35361939  T
Q  238 actaattgtgtaattttacctt 259  Q
    ||||||||||||||||| ||||    
T  35361938 actaattgtgtaatttttcctt 35361917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25363103 - 25363205
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||       ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  25363103 ttataaaatgacactattttatcatttttgtttgagatttatt-caatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagt 25363201  T
Q  101 ttga 104  Q
    ||||    
T  25363202 ttga 25363205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 35363101 - 35362971
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  35363101 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaggataaaggacgaaagtgttacctaaaataaagttaagggac 35363002  T
Q  240 taattgtgtaattttacctttaatttatttt 270  Q
    ||||||||||||||| || ||| ||||||||    
T  35363001 taattgtgtaattttgccattattttatttt 35362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3539854 - 3539748
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  3539854 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcctatgagt 3539756  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  3539755 ttgatgaa 3539748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 32936323 - 32936203
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||| |||    
T  32936323 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagtgac 32936224  T
Q  240 taattgtgtaattttaccttt 260  Q
    ||||||||||||||| |||||    
T  32936223 taattgtgtaattttgccttt 32936203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 32994279 - 32994165
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||         ||||||| ||||||||||  ||||||||| ||||  |    
T  32994279 cataaaaaggataactatgttgttattttataacataaaagactaaatcgttac--aaaaaaataaaggacgaaaatgttatttaaaattaagttaaacg 32994182  T
Q  238 actaattgtgtaatttt 254  Q
    |||||||||||||||||    
T  32994181 actaattgtgtaatttt 32994165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 18485776 - 18485662
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||          ||||||| |||| ||||||||||||| || |||||||||    
T  18485776 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 18485677  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  18485676 taattgtgtaatttt 18485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 32458076 - 32458134
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  32458076 taaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctt 32458134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20769800 - 20769905
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| ||||| |||||||||| ||||| ||||||||    
T  20769800 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcctatgagt 20769898  T
Q  101 ttgatga 107  Q
    |||||||    
T  20769899 ttgatga 20769905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40834024 - 40834129
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  40834024 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 40834122  T
Q  101 ttgatga 107  Q
    |||||||    
T  40834123 ttgatga 40834129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 7145775 - 7145881
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| || |||||||| ||||| ||    
T  7145775 taactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattatg 7145874  T
Q  248 taatttt 254  Q
    |||||||    
T  7145875 taatttt 7145881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 40834164 - 40834278
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    |||||||  |||||||||||||||||||||||||||||||||||| || ||          ||||||| |||| ||||||||||||| || |||||||||    
T  40834164 aaaaaggacaactatgttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 40834263  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  40834264 taattgtgtaatttt 40834278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2094830 - 2094724
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||| ||||    
T  2094830 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagt 2094732  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  2094731 ttgatgaa 2094724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 15178909 - 15178792
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||          ||||||| |||||| ||| |||||||||| |||| |    
T  15178909 cataaaaaggataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatattatctaaaattaagttaaag 15178810  T
Q  237 gactaattgtgtaatttt 254  Q
    ||||||| | ||||||||    
T  15178809 gactaatcgcgtaatttt 15178792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 19558122 - 19558215
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||||          ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  19558122 attttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 19558215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 30370631 - 30370514
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||| ||          |||| || |||| ||||||||||||| || ||||||    
T  30370631 cataaaaaagataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagg 30370532  T
Q  237 gactaattgtgtaatttt 254  Q
    ||||||||||||||||||    
T  30370531 gactaattgtgtaatttt 30370514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13600703 - 13600598
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||| | ||| ||||||||||| |||||||       ||| |||||||||||||||||||| ||||||| |||||||| ||||| ||||||||    
T  13600703 ttataaaatgataatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgataaagatttgcgtttgcctatgagt 13600605  T
Q  101 ttgatga 107  Q
    |||||||    
T  13600604 ttgatga 13600598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 3539712 - 3539586
Alignment:
Q  144 aagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggacta 241  Q
    |||| ||||||||||||||||||||||||||||||||||||| || ||           ||||||| |||||||||||||||||| || |||||||| ||    
T  3539712 aaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggatta 3539613  T
Q  242 attgtgtaattttacctttaatttatt 268  Q
    ||||| ||||||| || ||| ||||||    
T  3539612 attgtataatttttccattattttatt 3539586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 27843124 - 27843026
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||| ||||||||||||||          ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  27843124 ttgtcattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaatttt 27843026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 35362167 - 35362265
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||||||||||||||||||||||||||          ||||||| ||||  ||||||||||||||| |||||||||||||||||||||||| ||||    
T  35362167 attttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgcctt 35362265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 2094684 - 2094571
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    ||||| |||||||||||||||||||||||||||||||||| ||          |||||||  ||| ||||||||||||| || |||||||| ||||||||    
T  2094684 taactttgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaagtgttacctaaaataaagttaagggattaattgtg 2094585  T
Q  248 taattttaccttta 261  Q
    ||||||| ||||||    
T  2094584 taattttgccttta 2094571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 15179039 - 15179132
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||||||||||||||||||           ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  15179039 attttataacataaaggactaaatcgttaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 15179132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 30370756 - 30370853
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||| |||| |||||||| || ||||||||||||||||||||||||    
T  30370756 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgtaatttt 30370853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 2094862 - 2094915
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  2094862 taaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 2094915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7145626 - 7145731
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  |||||  |||||||    
T  7145626 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcatatgagt 7145724  T
Q  101 ttgatga 107  Q
    |||||||    
T  7145725 ttgatga 7145731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18485917 - 18485812
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||| |||||||| ||| |||||||||||||||  ||||| ||||||||    
T  18485917 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttctatgcttgtatgatgaagatttacgtttgcctatgagt 18485819  T
Q  101 ttgatga 107  Q
    |||||||    
T  18485818 ttgatga 18485812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 20769940 - 20770055
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| ||           ||||||| | || ||||||||||||| |  ||||||||    
T  20769940 aaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaaggga 20770039  T
Q  239 ctaattgtgtaatttt 254  Q
    ||||||||||||||||    
T  20770040 ctaattgtgtaatttt 20770055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 25363111 - 25363019
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||||         |||| || |||| |||||||||||||||| ||||||||||  ||||||||||||    
T  25363111 attttataacataaaggactaaatcgttacaaaaaaagataaatgacgaaagtgttacctaaaattaagttaagggactgtttgtgtaatttt 25363019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 32994444 - 32994497
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  32994444 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 32994497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 13600555 - 13600434
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttac---nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattg 245  Q
    |||||||||||||||||||||||||||||||||||||||| ||            ||||||| |||| ||||||||||||| ||  ||| ||||||||||    
T  13600555 taactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaaggtaaaggactaattg 13600456  T
Q  246 tgtaattttacctttaatttat 267  Q
    ||||||||| ||| || |||||    
T  13600455 tgtaattttgcctatagtttat 13600434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 40834037 - 40833934
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||     
T  40834037 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40833938  T
Q  256 cctt 259  Q
    ||||    
T  40833937 cctt 40833934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 32936450 - 32936548
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  32936450 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 32936548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 35363194 - 35363135
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||| |||||||||| |||||||||||||||  ||||| ||||||||||||||||    
T  35363194 gaaatttgactttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatgaa 35363135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 3539841 - 3539938
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||| ||||||||||||| |||||| | |||||||||| |||||||    
T  3539841 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaaattatgagactaattgtataatttt 3539938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32936463 - 32936358
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||  |||||||||||||||  ||||| ||||||||    
T  32936463 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagt 32936365  T
Q  101 ttgatga 107  Q
    |||||||    
T  32936364 ttgatga 32936358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35363279 - 35363332
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  35363279 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 35363332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19558130 - 19558094
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgaga 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  19558130 ttataaaatgacactattttatcatttttgtatgaga 19558094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 318
Target Start/End: Complemental strand, 131999 - 131964
Alignment:
Q  283 tgtaattaagatagtcgatagaattgtttttgatga 318  Q
    ||||||||||||||||||||||||||||||||||||    
T  131999 tgtaattaagatagtcgatagaattgtttttgatga 131964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 20769813 - 20769715
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| | ||||||||||| || ||||||||||||||||||||||||    
T  20769813 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaatttt 20769715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27843111 - 27843189
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaaga 81  Q
    ||||||||||||| ||||||||||||||| |||||||       |||||||||||||||||||||| | ||||||||||||    
T  27843111 ttataaaatgacaatattttatcattttt-tatgagatttttc-caatgaaatttgattttctaggtttgtatgatgaaga 27843189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 30370721 - 30370663
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    ||||||||||||| || ||| |||||||||||||||  ||||| |||||||||||||||    
T  30370721 gaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatgagtttgatga 30370663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 6541467 - 6541528
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaa 262  Q
    |||||||| ||| |||||||||||||||| |||| |||||||  |||||||||| |||||||    
T  6541467 taaaggatcaaactgttacctaaaattaagttaaaggactaaaagtgtaattttgcctttaa 6541528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 7145589 - 7145536
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || |||||||||||||||||| |||||    
T  7145589 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttatttt 7145536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 20339212 - 20339159
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || |||||||| |||||||||||||||    
T  20339212 taaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaatttt 20339159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 37093741 - 37093786
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||    
T  37093741 gaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 37093786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 1643810 - 1643864
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttatt 268  Q
    |||||| ||||||||| ||||||||||||  ||||||||||| ||| ||||||||    
T  1643810 tgttacttaaaattaagttaagggactaaaagtgtaattttatcttaaatttatt 1643864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 13600695 - 13600788
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||| ||| || ||||| ||||||||||||||||||    
T  13600695 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctacaataaagttaagagactaattgtgtaatttt 13600788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 108
Target Start/End: Original strand, 14274391 - 14274429
Alignment:
Q  70 gtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  14274391 gtatgatgaagatttgagtttgtttatgagtttgatgaa 14274429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 18485949 - 18485995
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    ||||||| |||| ||||||||||||| || |||||||||||||||||    
T  18485949 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 18485995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Original strand, 132298 - 132327
Alignment:
Q  162 attttataacataaaggactaaatcgttac 191  Q
    ||||||||||||||||||||||||||||||    
T  132298 attttataacataaaggactaaatcgttac 132327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 1098948 - 1098895
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  ||| |||||||| ||||||||||||||||||||  ||||||||||    
T  1098948 taaaggactaaactgttacctgaaattaaattaagggactaaaagtgtaatttt 1098895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 3294380 - 3294323
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||| ||||||| |||| ||| ||||||||||| | ||| ||||||||||||||||||    
T  3294380 taaaagatgaaagtgttgcctgaaattaaattatgagacaaattgtgtaattttacct 3294323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 13455932 - 13455973
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaa 242  Q
    |||||||| ||| |||||||||||||||| ||||||||||||    
T  13455932 taaaggatcaaactgttacctaaaattaagttaagggactaa 13455973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Original strand, 32994396 - 32994425
Alignment:
Q  162 attttataacataaaggactaaatcgttac 191  Q
    ||||||||||||||||||||||||||||||    
T  32994396 attttataacataaaggactaaatcgttac 32994425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 21258384 - 21258336
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgta 249  Q
    |||||||||||| ||||| |||| ||||| ||||||||| |||||||||    
T  21258384 taaaggatgaaagtgttatctaatattaagttaagggacgaattgtgta 21258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 42854837 - 42854897
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgat 105  Q
    ||||||||| ||| ||| |||| | |||||||||||||||  |||||| ||||||||||||    
T  42854837 caatgaaatatgagtttataggtttgtatgatgaagatttaagtttgtttatgagtttgat 42854897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44506134 - 44506240
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44506134 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 44506232  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  44506233 ttgatgaa 44506240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 3612716 - 3612594
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn--taaaggatgaaaatgttacctaaaattaaattaag 235  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||| |||||    
T  3612716 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaaaaataaaggacgaaaatgttacctaaaattaagttaag 3612617  T
Q  236 ggactaattgtgtaattttacct 258  Q
    |||||||||||||||||||||||    
T  3612616 ggactaattgtgtaattttacct 3612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3612855 - 3612748
Alignment:
Q  1 ttataaaatgacactattttatcatttttgt-atgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgag 99  Q
    ||||||||||| ||||||||||||||||| | ||||||       ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3612855 ttataaaatgaaactattttatcattttttttatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttgcgtttgtctatgag 3612757  T
Q  100 tttgatgaa 108  Q
    |||||||||    
T  3612756 tttgatgaa 3612748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 25847681 - 25847796
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  25847681 taactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtg 25847780  T
Q  248 taattttacctttaat 263  Q
    ||||||| ||| ||||    
T  25847781 taattttgcctataat 25847796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 8851921 - 8851807
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  8851921 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 8851822  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  8851821 taattgtgtaatttt 8851807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 44506271 - 44506386
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||| ||||||    
T  44506271 cataaaaaggataact--gttgttattttataacataaaggactaaatcgttacaaaaaaataataaaggacgaaaatgttacctaaaattaagttaagg 44506368  T
Q  237 gactaattgtgtaatttt 254  Q
    || |||||||||||||||    
T  44506369 gattaattgtgtaatttt 44506386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 11121510 - 11121625
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||           ||||||| |||| ||||||||||||| || ||||||||    
T  11121510 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggga 11121609  T
Q  239 ctaattgtgtaatttt 254  Q
    ||||||||||||||||    
T  11121610 ctaattgtgtaatttt 11121625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 22975573 - 22975687
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  22975573 aaaaaggataactttgttgttattttataacataaaggactaaatcgtaacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggac 22975672  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  22975673 taattgtgtaatttt 22975687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 37513319 - 37513433
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  37513319 aaaaaggataactatgttgatattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 37513418  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  37513419 taattgtgtaatttt 37513433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 9296499 - 9296386
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| |||||||||||||||||||||||||| | ||||||||||| ||         ||||||| |||| ||||||||||||| || ||||||||||    
T  9296499 aaaaaggataactatgttgttattttataacatagatgactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggact 9296400  T
Q  241 aattgtgtaatttt 254  Q
    ||||||||| ||||    
T  9296399 aattgtgtagtttt 9296386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 263
Target Start/End: Complemental strand, 17574473 - 17574367
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttac 256  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||| |||||||||||||||| |||| |||| |||||||||||||| |    
T  17574473 ttgtaattttataacataaaggactaaatcgtaacaaaaaaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgc 17574374  T
Q  257 ctttaat 263  Q
    |||||||    
T  17574373 ctttaat 17574367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 22316948 - 22317062
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  22316948 aaaaaggataactttgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 22317047  T
Q  240 taattgtgtaatttt 254  Q
    |||| ||||||||||    
T  22317048 taatcgtgtaatttt 22317062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 259
Target Start/End: Original strand, 36229994 - 36230111
Alignment:
Q  144 aagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggacta 241  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||           ||||||| |||| ||||||||||||| || |||||||| ||    
T  36229994 aaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggatta 36230093  T
Q  242 attgtgtaattttacctt 259  Q
    ||||||||||||| ||||    
T  36230094 attgtgtaatttttcctt 36230111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 49621207 - 49621321
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||| ||          |||| || |||| ||||||||||||| || |||||||||    
T  49621207 aaaaaggataactatgttgttattttataatataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggac 49621306  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  49621307 taattgtgtaatttt 49621321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 49711518 - 49711404
Alignment:
Q  140 taaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||||| |          ||||||| | || ||||||||||||| || |||||||||    
T  49711518 taaaaatgataactatgttgttattttataacataaatgactaaatcgtgataaaaaaagataaaggacgtaagtgttacctaaaataaagttaagggac 49711419  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  49711418 taattgtgtaatttt 49711404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22316808 - 22316913
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||| ||||    
T  22316808 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagt 22316906  T
Q  101 ttgatga 107  Q
    |||||||    
T  22316907 ttgatga 22316913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 28829980 - 28830095
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||           ||||||| |||| ||||| ||||||| || ||||||||    
T  28829980 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttagctaaaataaagttaaggga 28830079  T
Q  239 ctaattgtgtaatttt 254  Q
    ||||||||||||||||    
T  28830080 ctaattgtgtaatttt 28830095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23043446 - 23043342
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| ||||||||||| |||| ||||| ||||||||    
T  23043446 ttataaaatgacaatatcttatcattttt-tatgagatttttt-caaagaaatttgattttctaggcttgtatgatgaaggtttgcgtttgcctatgagt 23043349  T
Q  101 ttgatga 107  Q
    |||||||    
T  23043348 ttgatga 23043342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 44506142 - 44506043
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    ||||||||||||||||||||||||||||||          ||||||| |||| |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  44506142 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaattttaacttt 44506043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 48433917 - 48433800
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac---nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||            ||||||| |||| ||||||||||||| || |||||||    
T  48433917 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggg 48433818  T
Q  238 actaattgtgtaatttta 255  Q
    |||||||| |||||||||    
T  48433817 actaattgcgtaatttta 48433800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22975433 - 22975539
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| |||| |||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||| ||||    
T  22975433 ttataaaatgacaatatcttattattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagt 22975531  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  22975532 ttgatgaa 22975539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 36229864 - 36229763
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||||||||||||||||||    
T  36229864 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttta 36229765  T
Q  256 cc 257  Q
    ||    
T  36229764 cc 36229763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8852062 - 8851957
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| || ||||||||||||  ||||| ||||||||    
T  8852062 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatgagt 8851964  T
Q  101 ttgatga 107  Q
    |||||||    
T  8851963 ttgatga 8851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9296639 - 9296534
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||  |||||||||||||||  ||||| || |||||    
T  9296639 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcatgtatgatgaagatttacgtttgcctgtgagt 9296541  T
Q  101 ttgatga 107  Q
    |||||||    
T  9296540 ttgatga 9296534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28829840 - 28829945
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||| |||||||| ||| |||||||||||||||| ||||  ||||||||    
T  28829840 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttctaagcttgtatgatgaagatttgcgtttacctatgagt 28829938  T
Q  101 ttgatga 107  Q
    |||||||    
T  28829939 ttgatga 28829945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37513179 - 37513284
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||        || |||||||||||||||||||| |||||||||||||||   |||| ||||||||    
T  37513179 ttataaaatgacaatatcttatcattttt-tatgagattttttttaaagaaatttgattttctaggcttgtatgatgaagatttacatttgcctatgagt 37513277  T
Q  101 ttgatga 107  Q
    |||||||    
T  37513278 ttgatga 37513284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 55009334 - 55009441
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgt--tacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgt 246  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||          ||||||| |||| |||||| |||||| || ||||||||||||||||    
T  55009334 taactatgttgttatttgataacataaaggactaaatcgtgataaaaaaaaagataaaggacgaaagtgttacttaaaataaagttaagggactaattgt 55009433  T
Q  247 gtaatttt 254  Q
    ||||||||    
T  55009434 gtaatttt 55009441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17574460 - 17574563
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||| ||| ||||||||||||||| |||||||       ||||| ||||||||||| ||||||  ||||||||| ||||| ||||||||||||||    
T  17574460 ttataaaattacaatattttatcattttt-tatgagattttt--caatgcaatttgattttttaggcttttatgatgaaaatttgcgtttgtctatgagt 17574556  T
Q  101 ttgatga 107  Q
    |||||||    
T  17574557 ttgatga 17574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 48434013 - 48433957
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgat 105  Q
    |||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||    
T  48434013 gaaatttgattttctaggtttgtatgatgaagatttgcgtttgcctatgagtttgat 48433957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 22316821 - 22316723
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  22316821 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 22316723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 49711610 - 49711551
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||||    
T  49711610 gaaatttgattttttaggcttgtatgatgaagatttacgtttgcctatgagtttgatgaa 49711551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 22975392 - 22975334
Alignment:
Q  210 aaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttatt 268  Q
    ||||||||||||||||| || |||||||||||||||||||||||| ||| || ||||||    
T  22975392 aaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctatattttatt 22975334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 28829853 - 28829756
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||| ||||||||||||| || |||| | |||||||||||||||||    
T  28829853 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaagaactaattgtgtaatttt 28829756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 10687882 - 10687935
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  10687882 taaaggatgaaagtgttacctaaaattaagttaagagacgaattgtgtaatttt 10687935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 23043479 - 23043532
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||||||||||||||||| || |||| |||||||||||||||||||    
T  23043479 taaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaatttt 23043532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 48434092 - 48434145
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  48434092 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 48434145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 49621066 - 49621171
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| | ||||||||| |||||||       ||| ||||||||||||| || ||| |||||||||||||||  ||||| ||||||||    
T  49621066 ttataaaatgacaatatctcatcattttt-tatgagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatgagt 49621164  T
Q  101 ttgatga 107  Q
    |||||||    
T  49621165 ttgatga 49621171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 25847546 - 25847443
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||| | |||| ||||||||||||| ||||||||||||||||||| |||||||     
T  25847546 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaaattaagggactaattgtataattttg 25847447  T
Q  256 cctt 259  Q
    ||||    
T  25847446 cctt 25847443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 49984828 - 49984709
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||| | ||||||||||| ||          ||||||| |||||| ||| ||||||| |||||||  |||    
T  49984828 aaaaaggataactatgttgttattttataacatagaagactaaatcgtgacaaaaaaaagataaaggacgaaaatattatctaaaataaaattaaaagac 49984729  T
Q  240 taattgtgtaattttacctt 259  Q
    |||| || ||||||||||||    
T  49984728 taatggtataattttacctt 49984709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 23043304 - 23043257
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  23043304 aaaaaggataactatgtttttattttataacatagaggactaaatcgt 23043257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 44991096 - 44991159
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||||||| |||||| | | |||||||||||||| | |||||| |||||||||||||||    
T  44991096 caatgaaatttgagtttctatgtttgtatgatgaagattcgagtttgtttatgagtttgatgaa 44991159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 55009198 - 55009094
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttac 256  Q
    |||||||||||||||||||||||||||||||| ||         ||||||| |||| ||||||||||||| || ||||  |||||||||||  ||||| |    
T  55009198 ttgttattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa-agactaattgtgctattttgc 55009100  T
Q  257 ctttaa 262  Q
    ||||||    
T  55009099 ctttaa 55009094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 55009232 - 55009290
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||| ||| |||||||||||||||  ||||  |||||||||||||||    
T  55009232 gaaatttgattttctatgcttgtatgatgaagatttacgtttacctatgagtttgatga 55009290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 11221048 - 11220995
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||||||||||| ||||||||||||  ||||||||||    
T  11221048 taaaggatcaaactgttacctaaaattaagttaagggactaaaagtgtaatttt 11220995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 21016964 - 21016911
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttat 267  Q
    |||||||| |||||||||||||||| |||  || ||||||||||||||||||||    
T  21016964 tgttacctgaaattaaattaagggattaaaagtataattttacctttaatttat 21016911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25847533 - 25847638
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||| | || ||  |||||||||||||||  ||||| ||||||||    
T  25847533 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattctatatgcgtgtatgatgaagatttacgtttgcctatgagt 25847631  T
Q  101 ttgatga 107  Q
    |||||||    
T  25847632 ttgatga 25847638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 33491694 - 33491747
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || ||||| ||||||||||||||||||    
T  33491694 taaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaatttt 33491747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36229851 - 36229956
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||  |||||||||||||||  |||||  |||||||    
T  36229851 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcttatgagt 36229949  T
Q  101 ttgatga 107  Q
    |||||||    
T  36229950 ttgatga 36229956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49984968 - 49984863
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| | | |||||||||| ||||  ||||| || |||||    
T  49984968 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaagtttgtatgatgaatatttacgtttgcctgtgagt 49984870  T
Q  101 ttgatga 107  Q
    |||||||    
T  49984869 ttgatga 49984863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 53712307 - 53712250
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||| ||| |||||||||||||||| ||||||||||||   |||||||||||||    
T  53712307 taaaggatcaaactgttacctaaaattaagttaagggactaaaactgtaattttacct 53712250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 44664892 - 44664932
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  44664892 tgttacctaaaattaaattaagggactaaaagtgtaatttt 44664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 35850854 - 35850803
Alignment:
Q  57 attttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    |||||||||| | ||||||||||||||||  ||||| |||||||||||||||    
T  35850854 attttctaggtttgtatgatgaagatttgaatttgtttatgagtttgatgaa 35850803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 37513192 - 37513094
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          |||||||  ||| ||||||||||||| || |||||||||||||||||| |||||    
T  37513192 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgttatttt 37513094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 2862757 - 2862699
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    |||||||  ||| |||||||||||||||| ||||||||||||  |||||||||| ||||    
T  2862757 taaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcctt 2862699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 8852095 - 8852141
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    ||||||| |||| ||||||||||||| || |||||||||||||||||    
T  8852095 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 8852141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 11121418 - 11121476
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||| ||| |||||||||||||||  ||||  |||||||||| ||||    
T  11121418 gaaatttgattttctatgcttgtatgatgaagatttacgtttaactatgagttttatga 11121476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 17574598 - 17574632
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataa 175  Q
    ||||||| |||||||||||||||||||||||||||    
T  17574598 aaaaaggataactatgttgttattttataacataa 17574632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 29434357 - 29434299
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  || ||||||||||||    
T  29434357 taaaggatcaaattgttacctgaaattaagttaagggactaaaagtataattttacctt 29434299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 33491658 - 33491600
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||| |||| ||||||||||||| || |||||| ||||||||||| ||||| ||||    
T  33491658 taaaggacgaaactgttacctaaaataaagttaaggaactaattgtgtcattttgcctt 33491600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 45278516 - 45278482
Alignment:
Q  153 tatgttgttattttataacataaaggactaaatcg 187  Q
    ||||||| |||||||||||||||||||||||||||    
T  45278516 tatgttgatattttataacataaaggactaaatcg 45278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 50710746 - 50710692
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttatt 268  Q
    |||||||| ||||||| ||||||||||||  |||||||| | |||||||||||||    
T  50710746 tgttacctgaaattaagttaagggactaaaagtgtaattctgcctttaatttatt 50710692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 3612893 - 3612954
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttatttt 270  Q
    |||| ||||||||||| |||| |||   ||||||||||||||||||||||  ||||||||||    
T  3612893 gaaagtgttacctaaagttaagttacaagactaattgtgtaattttacctaaaatttatttt 3612954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 23043239 - 23043182
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    ||||||| |||| ||||||||||| | || ||| |||||| |||||||||||||||||    
T  23043239 taaaggacgaaagtgttacctaaagtaaagttatgggacttattgtgtaattttacct 23043182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 49711696 - 49711741
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||| || |||||||||||||| |||||||||    
T  49711696 gaaagtgttacctaaaataaagttaagggactaattatgtaatttt 49711741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 35747950 - 35748014
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaattt 265  Q
    |||||||  ||| |||||||| ||||||| |||||| |||||  |||||||||||||| ||||||    
T  35747950 taaaggaccaaactgttacctgaaattaagttaaggaactaaaagtgtaattttacctataattt 35748014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 39778550 - 39778590
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  39778550 tgttacctaaaattaagttaagggactaaaagtgtaatttt 39778590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 45567451 - 45567411
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  45567451 tgttacctaaaattaagttaagggactaaaagtgtaatttt 45567411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44379610 - 44379716
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44379610 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttgcgtttgtctatgagt 44379708  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  44379709 ttgatgaa 44379716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3691671 - 3691776
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3691671 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttaattttctaggctagtatgatgaagatttgtgtttgtctatgagt 3691769  T
Q  101 ttgatga 107  Q
    |||||||    
T  3691770 ttgatga 3691776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42123959 - 42123854
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  42123959 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttctaggctagtatgatgaaggtttgcgtttgtctatgagt 42123861  T
Q  101 ttgatga 107  Q
    |||||||    
T  42123860 ttgatga 42123854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4128829 - 4128935
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||| ||||||||||||||||| |||||||       ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  4128829 ttataaaatgaaactattttatcatttttttatgagatttttt-caatgaaatttgattttctagactagtatgatgaagatttgcgtttgtctatgagt 4128927  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  4128928 ttgatgaa 4128935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20223194 - 20223299
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20223194 ttataaaatgacactattttatcattttt-tatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttacgtttgtctatgagt 20223291  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  20223292 ttgatgaa 20223299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23792838 - 23792732
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  23792838 ttataaaatgacattattttatcatttttgtatgagatttttt-caatgaaatttgattttcttggctagtatgatgaagatttgcgtttgtctacgagt 23792740  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  23792739 ttgatgaa 23792732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7899848 - 7899953
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||||||||||||||||||| |||||||       |||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  7899848 ttataaaatgacactattttatcatttttttatgagatttttt-caataaaatttgattttctaggctagtatgatgacgatttgcgtttgtctatgagt 7899946  T
Q  101 ttgatga 107  Q
    |||||||    
T  7899947 ttgatga 7899953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 7899989 - 7900111
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||  ||||||||||||||||     
T  7899989 cataaaaaggataacaatgttgttattttataacataaaggactaaatcgttacaaaaaaatataaaggacgaaaatgttagataaaattaaattaagga 7900088  T
Q  238 actaattgtgtaattttaccttt 260  Q
    ||||||| ||||||||| |||||    
T  7900089 actaattctgtaattttgccttt 7900111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 3691811 - 3691928
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||| | ||||    
T  3691811 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagtgaagg 3691910  T
Q  237 gactaattgtgtaatttt 254  Q
    || |||||||||||||||    
T  3691911 gattaattgtgtaatttt 3691928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 262
Target Start/End: Original strand, 4128966 - 4129093
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaatta---aattaa 234  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||         |||||||  ||||||||| |||||||||   | ||||    
T  4128966 cataaaaaggataactatgttgttattttataacataaaggcctaaatcgttacaaaaaaagataaaggacaaaaatgttatctaaaattaattagttaa 4129065  T
Q  235 gggactaattgtgtaattttacctttaa 262  Q
    ||||||||||||||||||||||||||||    
T  4129066 gggactaattgtgtaattttacctttaa 4129093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 13327380 - 13327265
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||           |||||||||||| |||||||||||||||| |||||| |    
T  13327380 aaaaaggataactatgttgttattttataacataaatgactaaatcgttacaaaaaaaaaaataaaggatgaaagtgttacctaaaattaagttaaggaa 13327281  T
Q  239 ctaattgtgtaatttt 254  Q
    ||||||||||||||||    
T  13327280 ctaattgtgtaatttt 13327265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 42123821 - 42123705
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||            |||||||||||||| ||| |||||||||| |||||||    
T  42123821 cataaaaaggataactatgttgttattttataacataaaggactatatcgtacaaaaaaaagataaaggatgaaaatattatctaaaattaagttaaggg 42123722  T
Q  238 actaattgtgtaatttt 254  Q
    |||||||||||||||||    
T  42123721 actaattgtgtaatttt 42123705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 2968098 - 2968217
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  2968098 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 2968197  T
Q  240 taattgtgtaattttacctt 259  Q
    ||||||||||||||| ||||    
T  2968198 taattgtgtaattttgcctt 2968217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 30928434 - 30928316
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn--taaaggatgaaaatgttacctaaaattaaattaag 235  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||||||||           |||||||  |||||||||||||||||||| |||||    
T  30928434 cataaaaaggataactatgttggtattttataacataaaggacaaaatcgttacaaaaaaaataataaaggacaaaaatgttacctaaaattaagttaag 30928335  T
Q  236 ggactaattgtgtaatttt 254  Q
    |||||||||||||||||||    
T  30928334 ggactaattgtgtaatttt 30928316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30928567 - 30928465
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||    ||||||       |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  30928567 ttataaaatgacactattttatcattt----atgagatttttt-caatgaaatttgattttctaggctggtatgatgaagatttgcgtttgtctatgagt 30928473  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  30928472 ttgatgaa 30928465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 10682177 - 10682064
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||         ||||| | |||| ||||||||||||| || |||||||| |    
T  10682177 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgactaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggatt 10682078  T
Q  241 aattgtgtaatttt 254  Q
    ||||||||||||||    
T  10682077 aattgtgtaatttt 10682064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 17875998 - 17876112
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  17875998 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 17876097  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  17876098 taattgtgtaatttt 17876112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 27523170 - 27523107
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  27523170 caatgaaatttgattttctagacttgtatgatgaaaatttgtgtttgtctatgagtttgatgaa 27523107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 35482930 - 35483044
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||          ||||||| |||| ||||||||||||| || |||||||||    
T  35482930 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 35483029  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  35483030 taattgtgtaatttt 35483044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2967958 - 2968064
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| |||  |||||||||||||| |||||| ||||||||    
T  2967958 ttataaaatgacaatatcttatcatttttttatgagatttttttcaaagaaatttgattttctatgcttctatgatgaagatttatgtttgcctatgagt 2968057  T
Q  101 ttgatga 107  Q
    |||||||    
T  2968058 ttgatga 2968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 20223330 - 20223449
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacata--aaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaa 234  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||          ||||| | ||||||||||||||||||||| ||||    
T  20223330 cataaaaaggataactatgttgttattttataacatataaaggactaaattgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaa 20223429  T
Q  235 gggactaattgtgtaatttt 254  Q
    |||| |||||||||||||||    
T  20223430 gggattaattgtgtaatttt 20223449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30904618 - 30904513
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  30904618 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 30904520  T
Q  101 ttgatga 107  Q
    |||||||    
T  30904519 ttgatga 30904513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 30904478 - 30904359
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||          ||||||| |||| ||||||||||||| || ||||||||     
T  30904478 aaaaaggataactatgttgttattttataacataaaggactaaatcctgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggat 30904379  T
Q  240 taattgtgtaattttacctt 259  Q
    ||||||||||||||| ||||    
T  30904378 taattgtgtaattttgcctt 30904359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 14577092 - 14577208
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac---nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||            ||||||| |||| ||||||||||||| || |||||||    
T  14577092 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggg 14577191  T
Q  238 actaattgtgtaatttt 254  Q
    |||||||||||||||||    
T  14577192 actaattgtgtaatttt 14577208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 27912326 - 27912440
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  27912326 aaaaaggataactatcttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 27912425  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  27912426 taattgtgtaatttt 27912440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 27958745 - 27958859
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  27958745 aaaaaggataactatcttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 27958844  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  27958845 taattgtgtaatttt 27958859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 23792830 - 23792927
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||||||||||||||||||||||||||         |||||||  ||| |||||||||||||||| |||||||||||||||||| ||||| ||||    
T  23792830 attttataacataaaggactaaatcgttacaaaaaaagataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgttattttgcctt 23792927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 30904605 - 30904702
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  30904605 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 30904702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10682317 - 10682212
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| | |||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  10682317 ttataaaatgacaatatcttatcattttt-tgtgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 10682219  T
Q  101 ttgatga 107  Q
    |||||||    
T  10682218 ttgatga 10682212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 44379763 - 44379859
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaatt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||| | ||||||||||||||||||||| |||||| |||||||    
T  44379763 taactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaaggaactaatt 44379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 44379618 - 44379515
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    ||||||||||||||||||||||||||||||          ||||||| |||| |||||||||||||||| |||||||| ||||||||||||||| || ||    
T  44379618 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaattttgccatt 44379519  T
Q  261 aatt 264  Q
    ||||    
T  44379518 aatt 44379515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17844139 - 17844040
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||||||||||||| | |||||||       ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||    
T  17844139 ttataaaatgacaatattttatcatttct-tatgagatttttt-caatgaaatttgattttataggcttgtatgatgaagatttgcgtttgtctatgtgt 17844042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 20178427 - 20178369
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  20178427 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctt 20178369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 20223155 - 20223097
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  20223155 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctt 20223097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 3691679 - 3691576
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn--taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||||||||||||||||||||||||||           ||||||| |||| |||||||||||||||  |||||||||||||||||||||||| |||     
T  3691679 attttataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattatgttaagggactaattgtgtaattttgccta 3691580  T
Q  260 taat 263  Q
    ||||    
T  3691579 taat 3691576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 13327519 - 13327418
Alignment:
Q  2 tataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtt 101  Q
    |||||||||| | ||||||||||||||| |||||||       |||| ||||||||||| ||||||| ||||||||||||||||  |||||||||||| |    
T  13327519 tataaaatgataatattttatcattttt-tatgagatttttttcaataaaatttgatttgctaggcttgtatgatgaagatttgcatttgtctatgagat 13327421  T
Q  102 tga 104  Q
    |||    
T  13327420 tga 13327418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 17844170 - 17844223
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  17844170 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 17844223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17875856 - 17875961
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||| ||||||||| || ||||||||||||||||  |||| ||||||||    
T  17875856 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttctagacttgtatgatgaagatttgcatttgcctatgagt 17875954  T
Q  101 ttgatga 107  Q
    |||||||    
T  17875955 ttgatga 17875961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 30928602 - 30928655
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  30928602 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 30928655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 17875869 - 17875771
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  17875869 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 17875771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 35482803 - 35482705
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  35482803 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 35482705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 27523244 - 27523311
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttatt 268  Q
    |||||||||||| ||||| |||||||||| |||| |||| |||||||||||||| |||| || |||||    
T  27523244 taaaggatgaaagtgttaactaaaattaagttaaaggacgaattgtgtaattttgccttaaaattatt 27523311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 4128837 - 4128752
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgt 246  Q
    |||||||||||||||||||||||||||||           ||||||| |||| ||||||||||||||||||||| |||||||||||    
T  4128837 attttataacataaaggactaaatcgttaaaaaaagaagataaaggacgaaagtgttacctaaaattaaattaaaggactaattgt 4128752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 10682350 - 10682407
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    ||||||| |||| |||| |||||||| || ||||||||||||||||||||||| ||||    
T  10682350 taaaggacgaaagtgtttcctaaaataaagttaagggactaattgtgtaatttcacct 10682407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 13795562 - 13795517
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||||    
T  13795562 gaaaatgttagctaaaattaagttaagggacgaattgtgtaatttt 13795517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35482790 - 35482895
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||| |||||| || ||  |||||||||||||||  ||||| ||||||||    
T  35482790 ttataaaatgacaatatcttatcattttt-tatgagatgtttttcaaagaaattcgattttatatgcgtgtatgatgaagatttacgtttgcctatgagt 35482888  T
Q  101 ttgatga 107  Q
    |||||||    
T  35482889 ttgatga 35482895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 38464863 - 38464912
Alignment:
Q  139 ataaaaaggg-taactatgttgttattttataacataaaggactaaatcg 187  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  38464863 ataaaaagggataactatgttgatattttataacataaaagactaaatcg 38464912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 14577010 - 14577058
Alignment:
Q  59 tttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||| |||||||||||||||| ||||| ||||||| |||||||    
T  14577010 tttctaggcttgtatgatgaagatttgcgtttgcctatgagcttgatga 14577058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 34873581 - 34873518
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    |||||||||| || |||||| | | |||||||||||||||  |||||| |||||||||||||||    
T  34873581 caatgaaattcgagtttctatgtttgtatgatgaagatttaggtttgtttatgagtttgatgaa 34873518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 13795799 - 13795737
Alignment:
Q  46 aatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||| |||  |||||| | |||||||||||||||||| |||||| || ||||||||||||    
T  13795799 aatgaaaattgggtttctatgttagtatgatgaagatttgggtttgtttacgagtttgatgaa 13795737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 17866345 - 17866391
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    ||||||||||| ||| ||||| ||||||||| |||||||||||||||    
T  17866345 gaaaatgttacataatattaagttaagggacgaattgtgtaatttta 17866391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 27912151 - 27912105
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    ||||||| |||| ||||||||||||| || |||||||||||||||||    
T  27912151 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 27912105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 27912231 - 27912289
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||| ||| || ||||||||||||  ||||| |||||||| ||||||    
T  27912231 gaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatgagtatgatga 27912289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 27958570 - 27958524
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    ||||||| |||| ||||||||||||| || |||||||||||||||||    
T  27958570 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 27958524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 27958650 - 27958708
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||| ||| || ||||||||||||  ||||| |||||||| ||||||    
T  27958650 gaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatgagtatgatga 27958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 41850557 - 41850507
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||||||| |||||||||||||| |||| |||||| ||||||| ||||    
T  41850557 gaaaatgttacataaaattaaattaaaggacaaattgtataattttccctt 41850507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 7899856 - 7899827
Alignment:
Q  162 attttataacataaaggactaaatcgttac 191  Q
    ||||||||||||||||||||||||||||||    
T  7899856 attttataacataaaggactaaatcgttac 7899827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 26938442 - 26938495
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  ||| |||||||||||||||| ||||||||||||  ||||||||||    
T  26938442 taaaggactaaattgttacctaaaattaagttaagggactaaaagtgtaatttt 26938495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 27712820 - 27712767
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  ||| ||||||||||||| |||||||||||||||  ||||||||||    
T  27712820 taaaggactaaactgttacctaaaataaaattaagggactaaaagtgtaatttt 27712767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Original strand, 30928559 - 30928588
Alignment:
Q  162 attttataacataaaggactaaatcgttac 191  Q
    ||||||||||||||||||||||||||||||    
T  30928559 attttataacataaaggactaaatcgttac 30928588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Original strand, 42123951 - 42123980
Alignment:
Q  162 attttataacataaaggactaaatcgttac 191  Q
    ||||||||||||||||||||||||||||||    
T  42123951 attttataacataaaggactaaatcgttac 42123980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 42124002 - 42124047
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||  | |||||||||||||||    
T  42124002 gaaagtgttacctaaaattaaattaagaaattaattgtgtaatttt 42124047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 18806016 - 18806060
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||||||||||| | ||||||||||  ||||||||||||||    
T  18806016 tgttacctaaaattaagtaaagggactaaaagtgtaattttacct 18806060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 185
Target Start/End: Original strand, 31231332 - 31231360
Alignment:
Q  157 ttgttattttataacataaaggactaaat 185  Q
    |||||||||||||||||||||||||||||    
T  31231332 ttgttattttataacataaaggactaaat 31231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 39198671 - 39198611
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttta 261  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||| ||||||    
T  39198671 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgccttta 39198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 6e-34; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 31894481 - 31894597
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||         ||||||| |||||||||| |||||||||| |||||||    
T  31894481 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaaataaaggacgaaaatgttatctaaaattaagttaaggg 31894580  T
Q  238 actaattgtgtaatttt 254  Q
    |||||||||||||||||    
T  31894581 actaattgtgtaatttt 31894597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 1511309 - 1511193
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||         ||||||| |||||| |||||||||||||| |||||||    
T  1511309 cataaaaaggataattatgttgttattttataacataaaggactaaatcgttacaaaaaaaaataaaggacgaaaatattacctaaaattaagttaaggg 1511210  T
Q  238 actaattgtgtaatttt 254  Q
    |||||||||||||||||    
T  1511209 actaattgtgtaatttt 1511193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44307706 - 44307811
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  44307706 ttataaaatgacactattttatcattttt-tatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttacgtttgtctatgagt 44307803  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  44307804 ttgatgaa 44307811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 28408470 - 28408583
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||         ||||||| |||| ||||||||||||| || ||||||||||    
T  28408470 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggact 28408569  T
Q  241 aattgtgtaatttt 254  Q
    ||||||||||||||    
T  28408570 aattgtgtaatttt 28408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10878715 - 10878819
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||||||||||||||||||| |||||||       |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  10878715 ttataaaatgacactattttatcatttttttatgagatttttt-caatgaaatttgattt-ctaggctagtatgatgacgatttgcgtttgtctatgagt 10878812  T
Q  101 ttgatga 107  Q
    |||||||    
T  10878813 ttgatga 10878819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 7417741 - 7417859
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||| ||         ||||||| |||| ||||||||||||| || ||||||||||    
T  7417741 aaaaaggataactatgttgttattttataacaaaaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggact 7417840  T
Q  241 aattgtgtaattttacctt 259  Q
    |||||||||||||| ||||    
T  7417841 aattgtgtaattttgcctt 7417859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1511445 - 1511338
Alignment:
Q  1 ttataaaatgacactattttatcatttttgt-atgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgag 99  Q
    ||||||||||||||||||||||||||||| | ||||||       |||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  1511445 ttataaaatgacactattttatcattttttttatgagatttttt-caatgaaatttgattttctaggttagtatgatgaagatttacgtttgtctatgag 1511347  T
Q  100 tttgatgaa 108  Q
    |||||||||    
T  1511346 tttgatgaa 1511338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 32178083 - 32178204
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          |||||||  ||| ||||||||||||| || |||||||||    
T  32178083 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaagaaagataaaggacaaaagtgttacctaaaataaagttaagggac 32178182  T
Q  240 taattgtgtaattttaccttta 261  Q
    ||||||||||||||||||||||    
T  32178183 taattgtgtaattttaccttta 32178204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 32523431 - 32523545
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  32523431 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaataaaagataaaggacgaaagtgttacctaaaataaagttaagggac 32523530  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  32523531 taattgtgtaatttt 32523545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 32832462 - 32832580
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| |           ||||||| |||| ||||||||||||| ||||||||||||    
T  32832462 aaaaaggataactatattgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggac 32832561  T
Q  240 taattgtgtaattttacct 258  Q
    |||||||||||||||||||    
T  32832562 taattgtgtaattttacct 32832580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31894344 - 31894449
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||  ||||||       ||||||||||| ||||| | | ||||||||||||||||||| ||||||||||||||    
T  31894344 ttataaaatgacactattttatcattttttaatgagattttt--caatgaaatttaattttattgactagtatgatgaagatttgcgtttgtctatgagt 31894441  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  31894442 ttgatgaa 31894449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 2933391 - 2933284
Alignment:
Q  153 tatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaat 251  Q
    |||||||||||||||||||||||||||||||||||| |           |||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  2933391 tatgttgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaat 2933292  T
Q  252 tttacctt 259  Q
    ||||||||    
T  2933291 tttacctt 2933284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 1511437 - 1511529
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||||         ||||||| |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  1511437 attttataacataaaggactaaatcgttacaaaaaaagataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaatttt 1511529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19306001 - 19305896
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| ||||||||||||||| |||||| ||||||||    
T  19306001 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttatgtttgcctatgagt 19305903  T
Q  101 ttgatga 107  Q
    |||||||    
T  19305902 ttgatga 19305896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 32523289 - 32523394
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  32523289 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 32523387  T
Q  101 ttgatga 107  Q
    |||||||    
T  32523388 ttgatga 32523394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 44307842 - 44307961
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacata--aaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaa 234  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||          ||||| | ||||||||||||||||||||| ||||    
T  44307842 cataaaaaggataactatgttgttattttataacatataaaggactaaattgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaa 44307941  T
Q  235 gggactaattgtgtaatttt 254  Q
    |||| |||||||||||||||    
T  44307942 gggattaattgtgtaatttt 44307961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 49114090 - 49114213
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn--taaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||| ||           ||||||| |||| ||||||||||||| || ||||||||    
T  49114090 aaaaaggataactatgttgttattttataacacagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggga 49114189  T
Q  239 ctaattgtgtaattttacctttaa 262  Q
    |||||||||||||||| |||||||    
T  49114190 ctaattgtgtaattttgcctttaa 49114213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 8437422 - 8437308
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||          ||||||| |||| |||||| |||||| || |||||||||    
T  8437422 aaaaaggataactatgttgttattttataacataaaggactaaatcatgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggac 8437323  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  8437322 taattgtgtaatttt 8437308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 31894352 - 31894255
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    ||||||||||||||||||||||||||||||         ||||||| |||| |||||||||||||||| ||||||||||| |||||||||||| |||||    
T  31894352 attttataacataaaggactaaatcgttacaaaaaaaa-taaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgccttt 31894255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 45746934 - 45746876
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  45746934 gaaatttgattttctaggcttgtatgatgaagatttgcgtttgcctatgagtttgatga 45746876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7417600 - 7417705
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| |||||||||| ||||||||        || ||||||||||||||||| || |||||||||||||||| ||||| ||||||||    
T  7417600 ttataaaatgacaatatcttatcatttt-gtatgagattttttttaaagaaatttgattttctagacttgtatgatgaagatttgcgtttgcctatgagt 7417698  T
Q  101 ttgatga 107  Q
    |||||||    
T  7417699 ttgatga 7417705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 19305860 - 19305743
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac----nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||             ||||||| |||| ||||||||||||| || ||||||    
T  19305860 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 19305761  T
Q  237 gactaattgtgtaatttt 254  Q
    ||||||||||||||||||    
T  19305760 gactaattgtgtaatttt 19305743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 24986833 - 24986729
Alignment:
Q  143 aaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggacta 241  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| ||||||| ||||||    
T  24986833 aaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaaattaaaggacta 24986734  T
Q  242 attgt 246  Q
    |||||    
T  24986733 attgt 24986729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 32177943 - 32178048
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||| | |||||||||||||||  ||||| ||||||||    
T  32177943 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcctatgagt 32178041  T
Q  101 ttgatga 107  Q
    |||||||    
T  32178042 ttgatga 32178048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 10878723 - 10878628
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn---taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||||            ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  10878723 attttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 10878628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 44307667 - 44307609
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  44307667 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctt 44307609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8437562 - 8437457
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||| || ||| ||||||||||| |||||||       ||| ||||||| |||||||||||| |||||||||||||||  ||||| ||||||||    
T  8437562 ttataaaatgccaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcctatgagt 8437464  T
Q  101 ttgatga 107  Q
    |||||||    
T  8437463 ttgatga 8437457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 10878852 - 10878905
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac 191  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  10878852 cataaaaaggataacaatgttgttattttataacataaatgactaaatcgttac 10878905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 32177956 - 32177853
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| || |||| |||||||||||||||||||     
T  32177956 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaattttg 32177857  T
Q  256 cctt 259  Q
    ||||    
T  32177856 cctt 32177853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 37453187 - 37453148
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37453187 taactatgttgttattttataacataaaggactaaatcgt 37453148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 8437595 - 8437661
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttat 267  Q
    ||||||| |||| ||||||||||||| || |||||||||||||| ||||||||| ||||| ||||||    
T  8437595 taaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgccttttatttat 8437661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 7417567 - 7417514
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  7417567 taaaggacgaaaatgttacctaaaataaagttaagggattaattgtgtaatttt 7417514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 8869638 - 8869585
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  |||||||||||||||||||| ||||||||| ||||||||||||||    
T  8869638 taaaggaataaaatgttacctaaaattaagttaagggacgaattgtgtaatttt 8869585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28408330 - 28408435
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||  |||||||||||||||  ||||| ||||||||    
T  28408330 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagt 28408428  T
Q  101 ttgatga 107  Q
    |||||||    
T  28408429 ttgatga 28408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 30060523 - 30060474
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcg 187  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  30060523 cataaaaaggatgactatgttgatattttataacataaaggactaaatcg 30060474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 49113950 - 49114054
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||| ||||| |||||||||||||||  | ||| ||||||||    
T  49113950 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttccaggcttgtatgatgaagatttacg-ttgcctatgagt 49114047  T
Q  101 ttgatga 107  Q
    |||||||    
T  49114048 ttgatga 49114054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 45746841 - 45746794
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  45746841 aaaaaggataactatgttgttattttataacatagaggattaaatcgt 45746794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 49113963 - 49113865
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||| |||||||||||||||||||    
T  49113963 ttgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaatttt 49113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 32523302 - 32523201
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||||||||| | ||||||    
T  32523302 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtattatttta 32523203  T
Q  256 cc 257  Q
    ||    
T  32523202 cc 32523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37453324 - 37453242
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagattt 84  Q
    ||||||||||||| ||| ||||||||||| ||||| |       ||| |||||||||||||||||||| |||||||||||||||    
T  37453324 ttataaaatgacaatatcttatcattttt-tatgaaatttttttcaaagaaatttgattttctaggcttgtatgatgaagattt 37453242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 41922338 - 41922260
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttattttgttaaaata 279  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||| |||||| |||||||| || |||||    
T  41922338 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcctttattttatttttttcaaata 41922260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 8871489 - 8871542
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  8871489 taaaggaataaaatgttacctaaaattaagttaagggacgaattgtggaatttt 8871542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 10878922 - 10878975
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||||| ||| |||||||||| |||||| |||||||||||||||||    
T  10878922 taaaggacgaaaatattagctaaaattaagttaaggtactaattgtgtaatttt 10878975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 28408298 - 28408245
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || ||||||| ||||||||||||||||    
T  28408298 taaaggacgaaagtgttacctaaaataaagttaaggggctaattgtgtaatttt 28408245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 29226400 - 29226457
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagttt 102  Q
    ||||||||||||||||||||   | |||| ||||||||||| ||||||||||||||||    
T  29226400 caatgaaatttgattttctaaaattgtataatgaagatttgcgtttgtctatgagttt 29226457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 37453356 - 37453409
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || |||||||||| |||||||||||||    
T  37453356 taaaggacgaaagtgttacctaaaataaagttaagggactgattgtgtaatttt 37453409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 8806002 - 8806061
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  ||||||||||||||||    
T  8806002 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttaccttt 8806061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 21455812 - 21455871
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    |||||||  ||| ||||||||||||||||||||||| |||||  |||||||||| |||||    
T  21455812 taaaggaccaaattgttacctaaaattaaattaaggaactaaaagtgtaattttgccttt 21455871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 8522380 - 8522322
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    |||||||  |||||||||||| ||||||| ||||||||||||  |||||||||| ||||    
T  8522380 taaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcctt 8522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 7173189 - 7173246
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||| ||| |||||||| ||||||| |||||||| |||  ||||||||||||||    
T  7173189 taaaggatcaaactgttacctgaaattaagttaagggattaaaagtgtaattttacct 7173246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 8522570 - 8522627
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  ||||||||||||||    
T  8522570 taaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttacct 8522627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 8869786 - 8869729
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagttt 102  Q
    ||||||||||||| ||||| |  | |||||||||||||||| |||||| |||||||||    
T  8869786 caatgaaatttgagtttcttgatttgtatgatgaagatttgggtttgtttatgagttt 8869729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 11032533 - 11032496
Alignment:
Q  71 tatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  11032533 tatgatgaagatttgggtttgtttatgagtttgatgaa 11032496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 29099432 - 29099485
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  29099432 taaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 29099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 32832290 - 32832245
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgt 246  Q
    |||| ||| ||| ||||||||||||| |||||||||||||||||||    
T  32832290 taaaagataaaagtgttacctaaaataaaattaagggactaattgt 32832245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 33323161 - 33323112
Alignment:
Q  221 taaaattaaattaagggactaattgtgtaattttacctttaatttatttt 270  Q
    ||||||||||||||| ||| |||||| |||||||||||||| ||| ||||    
T  33323161 taaaattaaattaagagacgaattgtataattttacctttattttttttt 33323112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 42391352 - 42391287
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaattta 266  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||| || ||||||||    
T  42391352 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgccattaattta 42391287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 43267972 - 43267919
Alignment:
Q  216 ttacctaaaattaaattaagggactaattgtgtaattttacctttaatttattt 269  Q
    ||||||||||| ||||||||||| |||  ||||||||||||||| | |||||||    
T  43267972 ttacctaaaataaaattaagggattaaacgtgtaattttaccttaattttattt 43267919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 43575308 - 43575361
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  43575308 taaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaatttt 43575361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 45747013 - 45747066
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| ||||||||  ||||||||| |||||||    
T  45747013 taaaggacgaaagtgttacctaaaataaaattaagaaactaattgtataatttt 45747066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 2731393 - 2731437
Alignment:
Q  210 aaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||||||||||| |||| || |||| |||||||||    
T  2731393 aaaatgttacctaaaattaaatcaaggaacaaattatgtaatttt 2731437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 7149347 - 7149291
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacc 257  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||||||    
T  7149347 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttacc 7149291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 8114983 - 8115027
Alignment:
Q  210 aaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||| | ||||||| ||||||||| ||||||||||||||    
T  8114983 aaaatgttacttgaaattaagttaagggacaaattgtgtaatttt 8115027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 19125090 - 19125149
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttta 261  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||||||||||    
T  19125090 taaaggaccaaactgttacctgaaattaagttaagggactaa-agtgtaattttaccttta 19125149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 21733111 - 21733071
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||||||| ||||||||||||| ||||||||||    
T  21733111 tgttacctgaaattaagttaagggactaatagtgtaatttt 21733071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30799409 - 30799514
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  30799409 ttataaaatgacactattttatcatttttgtatgagattttt--caatgaaatttgattttctaggctagtatgatgaatatttgcgtttgtctatgagt 30799506  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  30799507 ttgatgaa 30799514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25297770 - 25297876
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||| ||||||||||||||||||||||       ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  25297770 ttataaaatgacacaattttatcatttttgtatgagatttttt-caatgaaatctgattttctaggctagtatgacgaagatttgcgtttgtctatgagt 25297868  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  25297869 ttgatgaa 25297876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 30055434 - 30055546
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||          |||||| ||||||||||||||||||||| |||||||    
T  30055434 cataaaaaggataactatgttgttattttataacataaaggactaaattgttacaaaaaa----aaaggacgaaaatgttacctaaaattaagttaaggg 30055529  T
Q  238 actaattgtgtaatttt 254  Q
    |||||||||||||||||    
T  30055530 actaattgtgtaatttt 30055546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 25297906 - 25298024
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||||||          ||||||||||||||||||| ||||||||| ||||||    
T  25297906 cataaaaaggataactatgttgttattttataacataaagaattaaatcgttacaaaaaaaaaataaaggatgaaaatgttacttaaaattaagttaagg 25298005  T
Q  237 gactaattgtgtaatttta 255  Q
    |||||||||||||||||||    
T  25298006 gactaattgtgtaatttta 25298024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 33692491 - 33692610
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||         |||| || |||| ||||||||||||| |||||||||||||    
T  33692491 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaagataaatgacgaaagtgttacctaaaataaaattaagggact 33692590  T
Q  241 aattgtgtaattttaccttt 260  Q
    |||||||||||||| |||||    
T  33692591 aattgtgtaattttgccttt 33692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 46143389 - 46143275
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||          ||||||| |||||||||||||||||| ||||||||||||    
T  46143389 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggac 46143290  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  46143289 taattgtgtaatttt 46143275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 30799545 - 30799666
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-----nnnnnnnnntaaaggatgaaaatgttacctaaaattaaatt 232  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||              ||||||| ||||||||||||||||||||| ||    
T  30799545 cataaaaaggataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaaaaaagataaaggacgaaaatgttacctaaaattaagtt 30799644  T
Q  233 aagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||    
T  30799645 aagggactaattgtgtaatttt 30799666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 42856912 - 42856807
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgt 248  Q
    |||||||||||||||||||||||||||| ||||||||||| ||         ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  42856912 taactatgttgttattttataacataaaagactaaatcgtgaccaaaaaaaataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgt 42856813  T
Q  249 aatttt 254  Q
    ||||||    
T  42856812 aatttt 42856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 49621666 - 49621787
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  49621666 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 49621765  T
Q  240 taattgtgtaattttaccttta 261  Q
    ||||||||||||||| ||||||    
T  49621766 taattgtgtaattttgccttta 49621787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2686069 - 2686172
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||| ||||||||||||||||  ||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  2686069 ttataaaatgacgctattttatcattttt--atgagatttttt-caatgaaatttgattttctaggctagtatgatgacgatttgcgtttgtctatgagt 2686165  T
Q  101 ttgatga 107  Q
    |||||||    
T  2686166 ttgatga 2686172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30055298 - 30055404
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       |||| |||||||||||||| | |||||||||| |||||||| ||||| ||||||||    
T  30055298 ttataaaatgacactattttatcatttttgtatgagatttttt-caataaaatttgattttcttgactagtatgataaagatttgcgtttgcctatgagt 30055396  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  30055397 ttgatgaa 30055404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 13294831 - 13294945
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  13294831 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 13294930  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  13294931 taattgtgtaatttt 13294945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 23163398 - 23163284
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  23163398 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 23163299  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  23163298 taattgtgtaatttt 23163284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 52690212 - 52690099
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||         ||||||| |||||| ||||||||||| || ||||| ||||    
T  52690212 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaagataaaggacgaaaatattacctaaaataaagttaagcgact 52690113  T
Q  241 aattgtgtaatttt 254  Q
    ||||||||||||||    
T  52690112 aattgtgtaatttt 52690099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33369599 - 33369705
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  33369599 ttataaaatgacaatatcttatcatttttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 33369698  T
Q  101 ttgatga 107  Q
    |||||||    
T  33369699 ttgatga 33369705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 50161226 - 50161113
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn---taaaggatgaaaatgttacctaaaattaaattaagggactaattg 245  Q
    |||||||||||||||||||||||||||||||||||||||| ||            ||||||| |||| ||||||||||||| || |||||||||||||||    
T  50161226 taactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 50161127  T
Q  246 tgtaattttacctt 259  Q
    ||||||||||||||    
T  50161126 tgtaattttacctt 50161113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3546577 - 3546683
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  3546577 ttataaaatgacaatatcttatcattttt-tatgagattcttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 3546675  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  3546676 ttgatgaa 3546683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 28458779 - 28458674
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| ||||| |||||||||| ||||| ||||||||    
T  28458779 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcctatgagt 28458681  T
Q  101 ttgatga 107  Q
    |||||||    
T  28458680 ttgatga 28458674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33692350 - 33692455
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| ||||||||||||||||  |||| ||||||||    
T  33692350 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcatttgcctatgagt 33692448  T
Q  101 ttgatga 107  Q
    |||||||    
T  33692449 ttgatga 33692455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 30799348 - 30799285
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatt 264  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  30799348 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttaccttaaatt 30799285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 33369748 - 33369858
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| |||||||||||||  | ||||| |||||||||||    
T  33369748 taactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaatatagttaagagactaattgtg 33369847  T
Q  248 taattttacct 258  Q
    |||||||||||    
T  33369848 taattttacct 33369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21053553 - 21053447
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||| ||||    
T  21053553 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagt 21053455  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  21053454 ttgatgaa 21053447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 48419474 - 48419369
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       |||  ||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  48419474 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaaaaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 48419376  T
Q  101 ttgatga 107  Q
    |||||||    
T  48419375 ttgatga 48419369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 52690353 - 52690249
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||| | ||| ||||||||    
T  52690353 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcg-ttgcctatgagt 52690256  T
Q  101 ttgatga 107  Q
    |||||||    
T  52690255 ttgatga 52690249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 55742836 - 55742956
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||          ||||||| |||| ||||| ||||||| || |||| ||||    
T  55742836 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaaaggac 55742935  T
Q  240 taattgtgtaattttaccttt 260  Q
    ||||||||||||||| |||||    
T  55742936 taattgtgtaattttgccttt 55742956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 55140285 - 55140389
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||| ||||||||||| ||||| ||||||||    
T  55140285 ttataaaatgacaatatcttatcattttt-tatgagatttttt-caaagaaatttgattttctaggcttgtataatgaagatttgcgtttgcctatgagt 55140382  T
Q  101 ttgatga 107  Q
    |||||||    
T  55140383 ttgatga 55140389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 5260294 - 5260204
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||||||||||||||||| || |||||||||||||||||    
T  5260294 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtg 5260204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 25297778 - 25297678
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn---taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    ||||||||||||||||||||||||||||||            ||||||| |||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  25297778 attttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T
Q  259 t 259  Q
    |    
T  25297678 t 25297678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 21053585 - 21053643
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||| ||||    
T  21053585 taaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctt 21053643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 21707813 - 21707755
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  21707813 gaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 21707755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 41689527 - 41689585
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  41689527 gaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 41689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 41689620 - 41689741
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| || ||          ||||||| |||||| |||| |||||| || ||||||| |    
T  41689620 aaaaaggataactatgttgttattttataacataaaggacaaaattgtaacaaaaaaaagataaaggacgaaaatattacttaaaataaagttaaggggc 41689719  T
Q  240 taattgtgtaattttaccttta 261  Q
    |||||||||||||||| |||||    
T  41689720 taattgtgtaattttatcttta 41689741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 42857051 - 42857144
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  42857051 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaatttt 42857144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 55742743 - 55742801
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  55742743 gaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 55742801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 2686077 - 2685988
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||||          ||| || |||| |||||||||||||||| ||||||||||||||||||||||||    
T  2686077 attttataacataaaggactaaatcgttacaaaaaaa---aaaagacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 2685988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 2686204 - 2686257
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac 191  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  2686204 cataaaaaggataacaatgttgttattttataacataaagtactaaatcgttac 2686257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5260281 - 5260386
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  || || ||||||||    
T  5260281 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtctgcctatgagt 5260379  T
Q  101 ttgatga 107  Q
    |||||||    
T  5260380 ttgatga 5260386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 20931092 - 20930972
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    |||||||  |||||| |||||||||||||||||||| |||||||| || ||          ||||||| |||| ||||||||||||| || |||||||||    
T  20931092 aaaaaggacaactatattgttattttataacataaaagactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 20930993  T
Q  240 taattgtgtaattttaccttt 260  Q
    ||||||||||||||| |||||    
T  20930992 taattgtgtaattttgccttt 20930972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20931234 - 20931129
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| ||||| |       ||| |||||||||||||||| ||| |||||||||||||||  ||||| ||||||||    
T  20931234 ttataaaatgacaatatcttatcattttt-tatgatatttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcctatgagt 20931136  T
Q  101 ttgatga 107  Q
    |||||||    
T  20931135 ttgatga 20931129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 28458639 - 28458524
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| ||           ||||||| | || ||||||||||||| |  ||||||||    
T  28458639 aaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaaggga 28458540  T
Q  239 ctaattgtgtaatttt 254  Q
    ||||||||||||||||    
T  28458539 ctaattgtgtaatttt 28458524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 37872823 - 37872770
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  37872823 taaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaatttt 37872770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 48419461 - 48419565
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| || |||||||||||||||||| |||||     
T  48419461 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttg 48419560  T
Q  256 ccttt 260  Q
    |||||    
T  48419561 ccttt 48419565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26202610 - 26202714
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||| ||||||| |||| |||||||||||||||| ||||  ||||||||    
T  26202610 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttcttggcttgtatgatgaagatttgcgtttacctatgagt 26202708  T
Q  101 ttgatg 106  Q
    ||||||    
T  26202709 ttgatg 26202714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 49621540 - 49621437
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||     
T  49621540 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49621441  T
Q  256 cctt 259  Q
    ||||    
T  49621440 cctt 49621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 9526053 - 9526151
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          |||||||||||| ||||||||||||| || |||||||||||||||||| |||||    
T  9526053 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgttatttt 9526151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 21707719 - 21707672
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  21707719 aaaaaggataactatgttgttattttataacataaatgactaaatcgt 21707672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 23163524 - 23163622
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  23163524 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 23163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 26202623 - 26202525
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  26202623 ttgtcattttataacataaaggactaaatcgtgacaagaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 26202525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 33692363 - 33692265
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  33692363 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 33692265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 50161361 - 50161459
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  50161361 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 50161459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 55742675 - 55742624
Alignment:
Q  203 aaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  55742675 aaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaatttt 55742624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 30055306 - 30055211
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn---taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||||            |||||||  ||| |||||||||||||||| ||||||||||||||||||||||||    
T  30055306 attttataacataaaggactaaatcgttacaaaaaaataaaataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 30055211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 9525917 - 9525808
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnnt----aaaggatgaaaatgttacctaaaattaaattaagggactaatt 244  Q
    |||||||||||||||||||||||||||| ||||||||||| ||              |||||| |||| ||||||||||||| || ||||||||||||||    
T  9525917 taactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaaaaggacgaaagtgttacctaaaataaagttaagggactaatt 9525818  T
Q  245 gtgtaatttt 254  Q
    ||||||||||    
T  9525817 gtgtaatttt 9525808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9526066 - 9525961
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||        || ||||||||||||| || ||| |||||||||||||||  ||||| ||||||||    
T  9526066 ttataaaatgacaatatcttatcattttt-tatgagatttttttaaaagaaatttgattttataagcttgtatgatgaagatttacgtttgcctatgagt 9525968  T
Q  101 ttgatga 107  Q
    |||||||    
T  9525967 ttgatga 9525961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13294691 - 13294796
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||   |||| ||||| ||    
T  13294691 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacatttgcctatgtgt 13294789  T
Q  101 ttgatga 107  Q
    |||||||    
T  13294790 ttgatga 13294796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23163537 - 23163432
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||| |||| ||||||||||  ||||| ||||||||    
T  23163537 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatgcttgtataatgaagatttacgtttgcctatgagt 23163439  T
Q  101 ttgatga 107  Q
    |||||||    
T  23163438 ttgatga 23163432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 23549707 - 23549650
Alignment:
Q  50 aaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||| |||||||||||| |||||||||||||||| ||||| |||||| ||||||||    
T  23549707 aaatttaattttctaggcttgtatgatgaagatttgcgtttgcctatgaatttgatga 23549650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 41689445 - 41689392
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  41689445 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 41689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 42857011 - 42856954
Alignment:
Q  50 aaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    ||||||||||||||| ||| |||||||||||||||  ||||| |||||||||||||||    
T  42857011 aaatttgattttctaagcttgtatgatgaagatttacgtttgcctatgagtttgatga 42856954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 46143528 - 46143424
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||| | ||||||||||||||| |||||||       ||| ||||||||||||||||||||  ||||||||||||||  ||||| |||||| |    
T  46143528 ttataaaatgataatattttatcattttt-tatgagatttttttcaaagaaatttgattttctaggctt-tatgatgaagatttacgtttgcctatgaat 46143431  T
Q  101 ttgatga 107  Q
    |||||||    
T  46143430 ttgatga 46143424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 49621527 - 49621632
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||  |||||||||||||||  ||||| ||||||||    
T  49621527 ttataaaatgacaatatcttatcattttt-tatgagatgtttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagt 49621625  T
Q  101 ttgatga 107  Q
    |||||||    
T  49621626 ttgatga 49621632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 50977709 - 50977604
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| |||  |||||||||| |||||||       ||||| ||| ||||||| |||| | |||||||||||||||| |||||| |||||||    
T  50977709 ttataaaatgacaatatcgtatcattttt-tatgagatttttttcaatggaatatgattttttaggtttgtatgatgaagatttgagtttgtttatgagt 50977611  T
Q  101 ttgatga 107  Q
    |||||||    
T  50977610 ttgatga 50977604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 3546725 - 3546761
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaat 185  Q
    |||||||||||||||||||||||||||||||||||||    
T  3546725 taactatgttgttattttataacataaaggactaaat 3546761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 33369564 - 33369512
Alignment:
Q  202 aaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  33369564 aaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 33369512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 37872901 - 37872957
Alignment:
Q  52 atttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||||||||||| |||||||||||||||  ||||| ||| ||||||||||||    
T  37872901 atttgattttctaggcttgtatgatgaagatttacgtttgcctacgagtttgatgaa 37872957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50161374 - 50161274
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||| |||||||||||||||  ||||| ||||||||    
T  50161374 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatgagt 50161276  T
Q  101 tt 102  Q
    ||    
T  50161275 tt 50161274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 5260421 - 5260535
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||| || |||||| | ||          ||||||| |||||||||||||||||| || ||||  |||    
T  5260421 aaaaaggataactatgttgttattttataacataaatgattaaatcatgacaaaacaaagataaaggacgaaaatgttacctaaaataaagttaaaagac 5260520  T
Q  240 taattgtgtaatttt 254  Q
    ||||| |||||||||    
T  5260521 taattatgtaatttt 5260535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 21053407 - 21053368
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  21053407 taactgtgttgttattttataacataaaggactaaatcgt 21053368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 23549576 - 23549529
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  23549576 aaaaaggataactacgttgttattttataacatagaggactaaatcgt 23549529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 28458766 - 28458864
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| | ||||||||||| || ||||||||||||||||||||||||    
T  28458766 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaatttt 28458864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 22335563 - 22335625
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    ||||||||| |||||||||||| | |||||||||||||||| |||||| | ||||||| ||||    
T  22335563 caatgaaatctgattttctaggtttgtatgatgaagatttgggtttgtttgtgagtttaatga 22335625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 55140298 - 55140201
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||| ||||||||||||||||| ||         ||||||| |||| ||||||||||||| || |||||||| |||| ||||||||||    
T  55140298 ttgtcattttataaaataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaatcgtgtaatttt 55140201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 55140426 - 55140539
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||| ||| ||         ||||||| |||| | |||| |||||| || |||| ||| |    
T  55140426 aaaaaggataactattttgttattttatagcataaaggactaaaccgtaacaaaaataaataaaggacgaaagtattacttaaaataaagttaaaggatt 55140525  T
Q  241 aattgtgtaatttt 254  Q
    ||||||||||||||    
T  55140526 aattgtgtaatttt 55140539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 2686274 - 2686327
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||| |||||||||| |||| ||| |||||||||||||||    
T  2686274 taaaagatgaaaatgttagctaaaattaagttaaaggattaattgtgtaatttt 2686327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 46143560 - 46143613
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || |||||| |||||||||||||||||    
T  46143560 taaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaatttt 46143613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 52690387 - 52690440
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || ||||| ||||||||||||||||||    
T  52690387 taaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaatttt 52690440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 23963107 - 23963158
Alignment:
Q  202 aaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattt 253  Q
    |||||| |||| |||||||||||||||| ||||||||||||  |||||||||    
T  23963107 aaaggacgaaattgttacctaaaattaagttaagggactaaaagtgtaattt 23963158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 25331871 - 25331812
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  |||||||||| |||||    
T  25331871 taaaggatcaaattgttacctgaaattaagttaagggactaaaagtgtaattttgccttt 25331812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 37872999 - 37873038
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  37872999 taactttgttgttattttataacataaatgactaaatcgt 37873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 23549615 - 23549577
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaagga 179  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  23549615 aaaaaggataactatgttgttattttataacatagagga 23549577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 3546544 - 3546491
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  ||| ||||||||||||| || |||||||||||||| |||||||||    
T  3546544 taaaggacaaaagtgttacctaaaataaagttaagggactaattatgtaatttt 3546491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 7067500 - 7067553
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  7067500 taaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 7067553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 16020013 - 16019960
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  16020013 taaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 16019960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 21360513 - 21360460
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  |||| ||||||||||||||| ||||||||||| || |||||||||    
T  21360513 taaaggactaaaacgttacctaaaattaagttaagggactatttatgtaatttt 21360460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 22335682 - 22335731
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||| |||||||||||||||||||||  ||| ||| ||||||||||||||    
T  22335682 gaaattgttacctaaaattaaattaatagacgaatcgtgtaattttacct 22335731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 30799417 - 30799388
Alignment:
Q  162 attttataacataaaggactaaatcgttac 191  Q
    ||||||||||||||||||||||||||||||    
T  30799417 attttataacataaaggactaaatcgttac 30799388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 43914496 - 43914443
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||| ||||| ||||| |||| ||||||||| ||||||||||||||    
T  43914496 taaacgatgaaagtgttatctaaatttaagttaagggacaaattgtgtaatttt 43914443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 563610 - 563566
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaat 185  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||||    
T  563610 aaaaaggataactatgttgacattttataacataaaggacaaaat 563566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 37068728 - 37068688
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  37068728 tgttacctaaaattaagttaagggactaaaagtgtaatttt 37068688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 45655963 - 45656003
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  45655963 tgttacctaaaattaagttaagggactaaaagtgtaatttt 45656003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 48419322 - 48419286
Alignment:
Q  152 ctatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  48419322 ctatgttgttattttataacataaatgactaactcgt 48419286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 52537935 - 52537879
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacc 257  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||||||    
T  52537935 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttacc 52537879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 12115177 - 12115294
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||| ||||||    
T  12115177 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagg 12115276  T
Q  237 gactaattgtgtaatttt 254  Q
    ||||||||||||||||||    
T  12115277 gactaattgtgtaatttt 12115294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 19897296 - 19897179
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||          ||||||| ||||||||||||||||||||| ||||||    
T  19897296 cataaaaaggataactatgttgttattttttaacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagg 19897197  T
Q  237 gactaattgtgtaatttt 254  Q
    |||||||||| |||||||    
T  19897196 gactaattgtataatttt 19897179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4969453 - 4969555
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  4969453 ttattaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagt 4969551  T
Q  101 ttga 104  Q
    ||||    
T  4969552 ttga 4969555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 4969590 - 4969718
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||          |||||||  ||||||||| |||||||||| |||||     
T  4969590 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacaaaaatgttatctaaaattaagttaagt 4969689  T
Q  237 gactaattgtgtaattttacctttaattt 265  Q
    |||||||||||||||||| ||||| ||||    
T  4969690 gactaattgtgtaattttgccttttattt 4969718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12115042 - 12115147
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||  ||||||||||||     
T  12115042 ttataaaatgatactattttatcattttt-tatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagatttgcatttgtctatgagc 12115139  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  12115140 ttgatgaa 12115147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 17985404 - 17985284
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||| |||    
T  17985404 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagac 17985305  T
Q  240 taattgtgtaattttaccttt 260  Q
    |||||||||||||||||||||    
T  17985304 taattgtgtaattttaccttt 17985284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 40290006 - 40290134
Alignment:
Q  139 ataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac---nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaag 235  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||            | ||||| ||||||||||||||||||||| |||||    
T  40290006 ataaaaaggataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaaaagattaaggacgaaaatgttacctaaaattaagttaag 40290105  T
Q  236 ggactaattgtgtaattttacctttaatt 264  Q
    ||||||||| ||||||||| |||| ||||    
T  40290106 ggactaattatgtaattttgccttaaatt 40290134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 40902444 - 40902330
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  40902444 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 40902345  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  40902344 taattgtgtaatttt 40902330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19897434 - 19897329
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||| |||||||  ||||||||||||     
T  19897434 ttataaaatgacactattttatcattttt-tatgagattttttt-aatgaaatttgattttctaggctagtatgatgtagatttgcatttgtctatgagc 19897337  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  19897336 ttgatgaa 19897329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 17611542 - 17611428
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| |||||| |||||| || |||||||||    
T  17611542 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggac 17611443  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  17611442 taattgtgtaatttt 17611428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 30002328 - 30002211
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          |||||||  ||| |||||| |||||| || |||||||||    
T  30002328 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacataaaataaagttaagggac 30002229  T
Q  240 taattgtgtaattttacc 257  Q
    ||||||||||||||||||    
T  30002228 taattgtgtaattttacc 30002211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 263
Target Start/End: Complemental strand, 7113983 - 7113859
Alignment:
Q  140 taaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||    
T  7113983 taaaaaggataactatgttgttgttttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggga 7113884  T
Q  239 ctaattgtgtaattttacctttaat 263  Q
    |||||||||||||||| ||| ||||    
T  7113883 ctaattgtgtaattttgcctataat 7113859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30562871 - 30562976
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  30562871 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 30562969  T
Q  101 ttgatga 107  Q
    |||||||    
T  30562970 ttgatga 30562976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 2026948 - 2027062
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||          ||||||| |||| |||||| |||||| || |||||||||    
T  2026948 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacataaaataaagttaagggac 2027047  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  2027048 taattgtgtaatttt 2027062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 30002454 - 30002551
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||||||||||||||||| || |||||||||||||||||| |||||    
T  30002454 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttatttt 30002551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2026809 - 2026914
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||| ||||||||  ||||| ||||||||    
T  2026809 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgaagaagatttacgtttgcctatgagt 2026907  T
Q  101 ttgatga 107  Q
    |||||||    
T  2026908 ttgatga 2026914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 12115008 - 12114955
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  12115008 taaaggatgaaaatgttacctaaaattaagttaagggactaattatgtaatttt 12114955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12139112 - 12139217
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||| |||||||||||| |||||||||||||||| |||||  |||||||    
T  12139112 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcatatgagt 12139210  T
Q  101 ttgatga 107  Q
    |||||||    
T  12139211 ttgatga 12139217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 12139252 - 12139367
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn--taaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||| ||           ||||||| |||| ||||||||||||| || ||||||||    
T  12139252 aaaaaggataactatgatgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggga 12139351  T
Q  239 ctaattgtgtaatttt 254  Q
    ||||||||||||||||    
T  12139352 ctaattgtgtaatttt 12139367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 30563011 - 30563140
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac--nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggga 238  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| ||           ||||| | |||| ||||||||||||| || ||||||||    
T  30563011 aaaaaggaaaactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaaggga 30563110  T
Q  239 ctaattgtgtaattttacctttaatttatt 268  Q
    ||||| |||||||||| ||| || ||||||    
T  30563111 ctaatcgtgtaattttgcctatattttatt 30563140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 25780134 - 25780235
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttac 256  Q
    |||| ||||||||||||||| ||||||||| | ||         ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||    
T  25780134 ttgtcattttataacataaatgactaaatcatgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttac 25780233  T
Q  257 ct 258  Q
    ||    
T  25780234 ct 25780235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1549415 - 1549520
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||        || |||||||||||||||||||| |||||||||||||||  ||||| |||||| |    
T  1549415 ttataaaatgacaatatcttatcattttt-tatgagattttttttaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgaat 1549513  T
Q  101 ttgatga 107  Q
    |||||||    
T  1549514 ttgatga 1549520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7114121 - 7114016
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       |||  |||||||||||| |||||| |||||||||||||||  ||||| ||||||||    
T  7114121 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaataaatttgattttttaggcttgtatgatgaagatttacgtttgcctatgagt 7114023  T
Q  101 ttgatga 107  Q
    |||||||    
T  7114022 ttgatga 7114016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17611682 - 17611577
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||| || ||| ||||||||||| |||||||       ||| ||||||| |||||||||||| |||||||||||||||  ||||| ||||||||    
T  17611682 ttataaaatgtcaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcctatgagt 17611584  T
Q  101 ttgatga 107  Q
    |||||||    
T  17611583 ttgatga 17611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40902585 - 40902480
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||| |||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  ||||| ||||||||    
T  40902585 ttataagatgacaatatcttatcattttt-tatgagattattttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatgagt 40902487  T
Q  101 ttgatga 107  Q
    |||||||    
T  40902486 ttgatga 40902480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 2026822 - 2026719
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||     
T  2026822 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2026723  T
Q  256 cctt 259  Q
    ||||    
T  2026722 cctt 2026719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30002467 - 30002364
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||        || |||||||||||||||||| | |||||||||||||||  ||||| ||||||||    
T  30002467 ttataaaatgacaatatcttatcattttt-tatgagattttttttaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcctatgagt 30002369  T
Q  101 ttgat 105  Q
    |||||    
T  30002368 ttgat 30002364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 9172201 - 9172152
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcg 187  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  9172201 cataaaaaggataactatgttgtcattttataatataaaggactaaatcg 9172152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 9180183 - 9180134
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcg 187  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  9180183 cataaaaaggataactatgttgtcattttataatataaaggactaaatcg 9180134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17985545 - 17985441
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  | ||| ||||||||    
T  17985545 ttataaaatgacaatatcttatcattttt-tatgagatttttt-caaagaaatttgattttctatgcttgtatgatgaagatttacgattgcctatgagt 17985448  T
Q  101 ttgatga 107  Q
    |||||||    
T  17985447 ttgatga 17985441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25780147 - 25780043
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  |||||  ||||| |    
T  25780147 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcatatgaat 25780049  T
Q  101 ttgatg 106  Q
    ||||||    
T  25780048 ttgatg 25780043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 1549428 - 1549330
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||||||||||| |||||    
T  1549428 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttatttt 1549330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 25779998 - 25779959
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  25779998 taactatgttgttattttataacataaagaactaaatcgt 25779959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 7114108 - 7114205
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| |||||||||||||||||||||||| || ||         ||||||| |||| ||||| ||||||| || |||| |||||||||||||||||||    
T  7114108 ttgtcattttataacataaaggactaaattgtgacaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaatggactaattgtgtaatttt 7114205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 17611674 - 17611767
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||||||| |||||||||    
T  17611674 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaatttt 17611767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 17985577 - 17985623
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    ||||||| |||||||||||||||||| || |||||||||||||||||    
T  17985577 taaaggacgaaaatgttacctaaaataaagttaagggactaattgtg 17985623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 30562884 - 30562787
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| |||||||||||||||| || ||||||| ||         ||||||| |||| ||||||||||||| || |||||||||||||||||| |||||    
T  30562884 ttgtcattttataacataaagaaccaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttatttt 30562787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 8828632 - 8828575
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||||||    
T  8828632 taaaggattaaactgttacctgaaattaagttaagggactaaaagtgtaattttacct 8828575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 25779941 - 25779888
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||| ||||||| || ||||||||||||||||||||||||    
T  25779941 taaaggacgaaagtgttatctaaaataaagttaagggactaattgtgtaatttt 25779888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 12139125 - 12139022
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||| | |||| | ||||||||||| |||||||| ||||||||||||||||||     
T  12139125 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaagaacgaaagtattacctaaaataaaattaagagactaattgtgtaattttg 12139026  T
Q  256 cctt 259  Q
    ||||    
T  12139025 cctt 12139022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 44067015 - 44067063
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgta 249  Q
    |||||||||||||||||| |||| ||||| ||||||||| |||||||||    
T  44067015 taaaggatgaaaatgttatctaatattaagttaagggacgaattgtgta 44067063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 186
Target Start/End: Original strand, 25267387 - 25267422
Alignment:
Q  151 actatgttgttattttataacataaaggactaaatc 186  Q
    ||||||||||||||||||||||||||||| ||||||    
T  25267387 actatgttgttattttataacataaaggattaaatc 25267422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 26874485 - 26874543
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    |||||||  ||| ||||||||||||| || ||||||||||||  |||||||||||||||    
T  26874485 taaaggactaaactgttacctaaaataaagttaagggactaaaagtgtaattttacctt 26874543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 33471459 - 33471413
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    |||||||| ||||||| ||||||||||||  ||||||||||||||||    
T  33471459 tgttacctgaaattaagttaagggactaaaagtgtaattttaccttt 33471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 1501777 - 1501834
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||  ||| |||||||| ||||||||||||||||||||  || |||||||||||    
T  1501777 taaaggaccaaactgttacctgaaattaaattaagggactaaaagtataattttacct 1501834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 9172848 - 9172901
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||||||||||| |||| |||  ||||||||||||||    
T  9172848 taaaggattaaagtgttacctaaaattaagttaaaggatgaattgtgtaatttt 9172901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 9180830 - 9180883
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||||||||||| |||| |||  ||||||||||||||    
T  9180830 taaaggattaaagtgttacctaaaattaagttaaaggatgaattgtgtaatttt 9180883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 17504091 - 17504038
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  17504091 taaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 17504038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 25267237 - 25267184
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||| | |||||||    
T  25267237 taaaggacgaaagtgttatctaaaattaaattaagggattaattatataatttt 25267184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 25267442 - 25267495
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||| ||||| |||||||||| ||||| |||| |||| ||||||||    
T  25267442 taaaggatgaaagtgttatctaaaattaagttaagagactgattgcgtaatttt 25267495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 27546983 - 27546942
Alignment:
Q  216 ttacctaaaattaaattaagggactaattgtgtaattttacc 257  Q
    |||||| |||||||||||||||||||| | ||||||||||||    
T  27546983 ttacctgaaattaaattaagggactaaatatgtaattttacc 27546942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 33128411 - 33128456
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgt 246  Q
    |||||||| |||||||||||||||||||| ||||| ||| ||||||    
T  33128411 taaaggataaaaatgttacctaaaattaagttaagagacaaattgt 33128456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35521465 - 35521518
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  ||| |||||||||||||||| ||||||||||||  ||||||||||    
T  35521465 taaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaatttt 35521518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 40902617 - 40902674
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||  ||| ||||||||||||| || |||||||||||||||||  |||||||||    
T  40902617 taaaggacaaaagtgttacctaaaataaagttaagggactaattgtgctattttacct 40902674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 46283660 - 46283713
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| ||||| || ||||||||||||||||||||  ||||||||||    
T  46283660 taaaggatcaaactgttatctgaaattaaattaagggactaaaagtgtaatttt 46283713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 48970955 - 48971012
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||  |||||||||||| ||||||| ||||||||||||   |||||||||||||    
T  48970955 taaaggaccaaaatgttacctgaaattaagttaagggactaaaaatgtaattttacct 48971012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 26874283 - 26874227
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacc 257  Q
    |||||||| ||| ||| |||| |||||||||||||||||||   |||||||||||||    
T  26874283 taaaggattaaactgtaacctgaaattaaattaagggactagaagtgtaattttacc 26874227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 40770398 - 40770454
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacc 257  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||||||    
T  40770398 taaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttacc 40770454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 40934676 - 40934732
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacc 257  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||||||    
T  40934676 taaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttacc 40934732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12685 - 12791
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  12685 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagt 12783  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  12784 ttgatgaa 12791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 12822 - 12939
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagg 236  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||| |||||||||| ||||||    
T  12822 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaagttaagg 12921  T
Q  237 gactaattgtgtaatttt 254  Q
    ||||||||||||||||||    
T  12922 gactaattgtgtaatttt 12939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 12693 - 12664
Alignment:
Q  162 attttataacataaaggactaaatcgttac 191  Q
    ||||||||||||||||||||||||||||||    
T  12693 attttataacataaaggactaaatcgttac 12664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5547337 - 5547231
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||||||||||||||| |||||||       ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  5547337 ttataaaatgacattattttatcatttttttatgagatttttt-caatgaaatttaattttctaggctagtatgatgaagatttgtgtttgtctatgaat 5547239  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  5547238 ttgatgaa 5547231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30337512 - 30337618
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||    
T  30337512 ttataaaatgacactattttatcatttttgtatgagaattttt-caatgaaatttgattttcttgaatagtatgatgaagatttgcgtttgtctatgagt 30337610  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  30337611 ttgatgaa 30337618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 20364087 - 20363973
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| ||||||||||||    
T  20364087 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggac 20363988  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  20363987 taattgtgtaatttt 20363973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 2318719 - 2318837
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggact 240  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| ||         ||||||| |||| ||||||||||||| || ||||||||||    
T  2318719 aaaaaggataactatgttgttattttataacataaaagactaaatcgtgacaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggact 2318818  T
Q  241 aattgtgtaattttacctt 259  Q
    |||||||||||||| ||||    
T  2318819 aattgtgtaattttgcctt 2318837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 27360350 - 27360464
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| || |||||||||    
T  27360350 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggac 27360449  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  27360450 taattgtgtaatttt 27360464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 9319919 - 9319805
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  9319919 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 9319820  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||| ||||    
T  9319819 taattgtgtagtttt 9319805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 18916853 - 18916975
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||| | |||| ||||||||||||| || |||||||||    
T  18916853 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggac 18916952  T
Q  240 taattgtgtaattttacctttaa 262  Q
    ||||| ||||||||| |||||||    
T  18916953 taattatgtaattttgcctttaa 18916975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10044833 - 10044938
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||| ||||| |||||| |    
T  10044833 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcctatgaat 10044931  T
Q  101 ttgatga 107  Q
    |||||||    
T  10044932 ttgatga 10044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10108902 - 10109007
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||| |||||||||||| |||||||||||||||| ||||| ||||||||    
T  10108902 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcctatgagt 10109000  T
Q  101 ttgatga 107  Q
    |||||||    
T  10109001 ttgatga 10109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20364228 - 20364123
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  20364228 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 20364130  T
Q  101 ttgatga 107  Q
    |||||||    
T  20364129 ttgatga 20364123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 17846109 - 17845998
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| || ||||||||||||||||||||||||     
T  17846109 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 17846010  T
Q  256 cctttaatttat 267  Q
    |||||| |||||    
T  17846009 cctttattttat 17845998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 44536429 - 44536540
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          |||||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  44536429 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaatttta 44536528  T
Q  256 cctttaatttat 267  Q
    |||  |||||||    
T  44536529 cctaaaatttat 44536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 4261254 - 4261152
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  4261254 ttgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaatttta 4261155  T
Q  256 cct 258  Q
    |||    
T  4261154 cct 4261152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 17846236 - 17846350
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  17846236 aaaaaggataactatgttgttattttataacatataggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 17846335  T
Q  240 taattgtgtaatttt 254  Q
    ||||||| |||||||    
T  17846336 taattgtataatttt 17846350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 30337520 - 30337427
Alignment:
Q  162 attttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  30337520 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaatttt 30337427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2318580 - 2318685
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  ||||| ||||||||    
T  2318580 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatgagt 2318678  T
Q  101 ttgatga 107  Q
    |||||||    
T  2318679 ttgatga 2318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 30337649 - 30337702
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttac 191  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  30337649 cataaaaaagataactatgttgttattttataacataaaggactaaatcgttac 30337702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 601557 - 601675
Alignment:
Q  140 taaaaagggtaactatgttgttattttataacataaaggactaaatcgttac----nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaag 235  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||             |||||||  ||| ||||||||||||| || |||||    
T  601557 taaaaaggataactatgttgttatttcataacataaaggactaaatcgtgacaaaaaaaataagataaaggacaaaagtgttacctaaaataaagttaag 601656  T
Q  236 ggactaattgtgtaatttt 254  Q
    |||||||||||||||||||    
T  601657 ggactaattgtgtaatttt 601675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 5547198 - 5547148
Alignment:
Q  140 taaaaagggtaactatgttgttattttataacataaaggactaaatcgtta 190  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  5547198 taaaaaggataactatgttgttattttataacataaaagactaaatcgtta 5547148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 27360256 - 27360314
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    |||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  27360256 gaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 27360314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4261241 - 4261345
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||| ||||||||||||| |||||||||||||||| | ||| ||||||||    
T  4261241 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaattagattttctaggcttgtatgatgaagatttgcg-ttgcctatgagt 4261338  T
Q  101 ttgatga 107  Q
    |||||||    
T  4261339 ttgatga 4261345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 5547340 - 5547393
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  5547340 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 5547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9320060 - 9319955
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||||||| || |||||||||||||||  ||||| ||||| ||    
T  9320060 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgcctatgcgt 9319962  T
Q  101 ttgatga 107  Q
    |||||||    
T  9319961 ttgatga 9319955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 9320047 - 9320151
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttta 255  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||     
T  9320047 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 9320146  T
Q  256 ccttt 260  Q
    |||||    
T  9320147 ccttt 9320151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17846096 - 17846201
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||||||| || |||||||||||||||  ||||| ||| ||||    
T  17846096 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgcctaagagt 17846194  T
Q  101 ttgatga 107  Q
    |||||||    
T  17846195 ttgatga 17846201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 2318593 - 2318503
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtg 247  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||| |||| ||||||||||||| || |||||||||||||||||    
T  2318593 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 2318503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 268
Target Start/End: Original strand, 4261389 - 4261512
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgttac----nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaatt 244  Q
    |||||||||||||||||||||||||| ||||||||||||| ||             ||||||| |||| ||||||||||||| || |||| |||||||||    
T  4261389 taactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaacggactaatt 4261488  T
Q  245 gtgtaattttacctttaatttatt 268  Q
    |||||||||| ||| || ||||||    
T  4261489 gtgtaattttgcctatattttatt 4261512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 8322429 - 8322534
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttac 256  Q
    |||| ||||||||||||||||||||||||||| |          ||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||| |    
T  8322429 ttgtcattttataacataaaggactaaatcgtga-aaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttgc 8322527  T
Q  257 ctttaat 263  Q
    || ||||    
T  8322528 ctataat 8322534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 10109043 - 10109090
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgt 188  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  10109043 aaaaaggataactatattgttattttataacataaaggactaaatcgt 10109090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 18916726 - 18916628
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  18916726 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 18916628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 44536394 - 44536335
Alignment:
Q  49 gaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    |||||||||||||||||||| |||||||||||||||   |||| ||||||||||||||||    
T  44536394 gaaatttgattttctaggcttgtatgatgaagatttacatttgcctatgagtttgatgaa 44536335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 31770000 - 31769938
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 107  Q
    ||||||||||||| ||||| | || |||||||||||||||| |||||| ||||||||||||||    
T  31770000 caatgaaatttgagtttcttgacttgtatgatgaagatttgggtttgtttatgagtttgatga 31769938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 10044801 - 10044748
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  10044801 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 10044748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18916713 - 18916818
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||  |||||||||||||||  ||||| ||||||||    
T  18916713 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagt 18916811  T
Q  101 ttgatga 107  Q
    |||||||    
T  18916812 ttgatga 18916818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 27360175 - 27360122
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||||| ||||||||||| || ||||||||||||||||||||||||    
T  27360175 taaaggacgaaaatattacctaaaataaagttaagggactaattgtgtaatttt 27360122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 40710372 - 40710319
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||    
T  40710372 taaaggatgaaaatattacctgaaattaagttaagggacgaattgtgtaatttt 40710319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 5547148 - 5547105
Alignment:
Q  211 aaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  5547148 aaatgttatctaaaattaagttaagggactaattgtgtaatttt 5547105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 20364215 - 20364313
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||| |||||||||||||||||||    
T  20364215 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaatttt 20364313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 3889129 - 3889186
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||||||    
T  3889129 taaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaattttacct 3889186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 10108861 - 10108816
Alignment:
Q  209 gaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||    
T  10108861 gaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 10108816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 30337718 - 30337771
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| || ||||||| |||||||||| |||||||||||||| |||||||||    
T  30337718 taaaggacgataatgttatctaaaattaagttaagggactaattctgtaatttt 30337771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 981828 - 981784
Alignment:
Q  210 aaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  981828 aaaatattacctaaaattaagttaagggacaaattgtgtaatttt 981784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 8236898 - 8236834
Alignment:
Q  45 caatgaaatttgattttc-taggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||| |||||||| |||  | |||||||||||||||| |||||| |||||||||||||||    
T  8236898 caatgaaatatgattttcctagatttgtatgatgaagatttgggtttgtttatgagtttgatgaa 8236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 18449399 - 18449359
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  18449399 tgttacctgaaattaaattaagggactaaatgtgtaatttt 18449359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 43055869 - 43055821
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatc 186  Q
    |||||||||| ||||||||||| |||||||||||||||| || ||||||    
T  43055869 cataaaaaggataactatgttgatattttataacataaatgaataaatc 43055821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 44536301 - 44536265
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaag 177  Q
    ||||||| |||||||||||||||||||||||||||||    
T  44536301 aaaaaggataactatgttgttattttataacataaag 44536265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 10044982 - 10045021
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatcgt 188  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  10044982 taactatgttattattttataacataaaggaataaatcgt 10045021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 40044513 - 40044458
Alignment:
Q  46 aatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtt 101  Q
    |||||||||||||||||| || | ||||||||||||| || |||||| ||||||||    
T  40044513 aatgaaatttgattttctgggtttgtatgatgaagatctgagtttgtttatgagtt 40044458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 8322361 - 8322315
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcg 187  Q
    ||||||| ||| |||||||| ||||||||||||||| ||||||||||    
T  8322361 aaaaaggataattatgttgtcattttataacataaatgactaaatcg 8322315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 9912172 - 9912238
Alignment:
Q  202 aaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttatt 268  Q
    ||||||| ||| |||||||||||||||| |||||||| |||  |||||||||| |||| | ||||||    
T  9912172 aaaggatcaaactgttacctaaaattaagttaagggattaaaagtgtaattttgccttaattttatt 9912238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 10714279 - 10714329
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacctttaatt 264  Q
    |||||||| ||||||| ||||||||||||  |||||||||| |||||||||    
T  10714279 tgttacctgaaattaagttaagggactaaaagtgtaattttgcctttaatt 10714329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 13862593 - 13862492
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttac 256  Q
    |||| |||||||||||||||||||||| |||  ||         ||||||| |||| | |||| ||||||||| |||| |||| ||||||||||||||||    
T  13862593 ttgtcattttataacataaaggactaattcgagacaaaaaaagataaaggacgaaagtattacttaaaattaagttaaaggacgaattgtgtaattttac 13862494  T
Q  257 ct 258  Q
    ||    
T  13862493 ct 13862492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 9911965 - 9911908
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  ||||||||||||||    
T  9911965 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttacct 9911908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 33274655 - 33274708
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  ||| |||||||||||||||| ||||||||||||  ||||||||||    
T  33274655 taaaggaccaaattgttacctaaaattaagttaagggactaaaagtgtaatttt 33274708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 40044398 - 40044361
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaatc 186  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  40044398 taactatgttgatattttataatataaaggactaaatc 40044361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 42950780 - 42950825
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    |||||||| ||||||||||||||||||||  |||||||||| ||||    
T  42950780 tgttacctgaaattaaattaagggactaaaagtgtaattttgcctt 42950825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 601418 - 601522
Alignment:
Q  2 tataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtt 101  Q
    |||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| ||  ||  ||||||||||||||   |||| |||||||||    
T  601418 tataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatacttttatgatgaagatttacatttgcctatgagtt 601516  T
Q  102 tgatga 107  Q
    ||||||    
T  601517 tgatga 601522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 9992071 - 9992115
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattg 245  Q
    |||||||| |||||||||| ||||||||||||||| ||| |||||    
T  9992071 taaaggataaaaatgttacttaaaattaaattaagagacgaattg 9992115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 13421335 - 13421395
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttta 261  Q
    |||||||  ||| |||||||||||||||| ||||||||||||  |||||| ||| ||||||    
T  13421335 taaaggaacaaactgttacctaaaattaagttaagggactaaaagtgtaactttgccttta 13421395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 21251072 - 21251024
Alignment:
Q  211 aaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    ||||||||||||||||||| |||||||| || || ||||||||| ||||    
T  21251072 aaatgttacctaaaattaagttaagggaatatttatgtaattttgcctt 21251024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 23926649 - 23926726
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaatttattttgttaaaatat 280  Q
    |||| ||| ||| |||||||| ||||||| |||||||| |||  ||||||||||||||| |  ||||||| |||||||||    
T  23926649 taaaagatcaaattgttacctgaaattaagttaagggattaaaagtgtaattttaccttga--ttatttttttaaaatat 23926726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 37084881 - 37084917
Alignment:
Q  149 taactatgttgttattttataacataaaggactaaat 185  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  37084881 taactatgttgatattttataacataaaagactaaat 37084917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 12058 - 11943
Alignment:
Q  138 cataaaaagggtaactatgttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||          |||| | ||||||||||||||||||||| |||||||    
T  12058 cataaaaaggataactatgttgttattttataacataaaggactaaatcgataccaaaaaaaa-aaagaacgaaaatgttacctaaaattaagttaaggg 11960  T
Q  238 actaattgtgtaatttt 254  Q
    |||||||||||||||||    
T  11959 actaattgtgtaatttt 11943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12195 - 12089
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||| |||| |||||  |||||||||||||     
T  12195 ttataaaatgacactattttatcatttttgtatgagatttttt-caatgaaatttgattttcttggctagtataatgatgatttccgtttgtctatgagc 12097  T
Q  101 ttgatgaa 108  Q
    ||||||||    
T  12096 ttgatgaa 12089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 12223 - 12282
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    ||||||| |||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttt 12282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 137033 - 136919
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| || |||||||||    
T  137033 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggac 136934  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  136933 taattgtgtaatttt 136919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 137171 - 137068
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| |||||||||||   |||||       ||| ||||||||||||| || ||| |||||||||||||||  ||||| |||| |||    
T  137171 ttataaaatgacaatatcttatcattttt---tgagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctataagt 137075  T
Q  101 ttgatga 107  Q
    |||||||    
T  137074 ttgatga 137068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 330314 - 330200
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||||||||||||||||| || |||||||||    
T  330314 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggac 330215  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  330214 taattgtgtaatttt 330200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 330452 - 330349
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| |||||||||||   |||||       ||| ||||||||||||| || ||| |||||||||||||||  ||||| |||| |||    
T  330452 ttataaaatgacaatatcttatcattttt---tgagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctataagt 330356  T
Q  101 ttgatga 107  Q
    |||||||    
T  330355 ttgatga 330349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 23068813 - 23068693
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  23068813 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 23068714  T
Q  240 taattgtgtaattttaccttt 260  Q
    ||||||||||||||| |||||    
T  23068713 taattgtgtaattttgccttt 23068693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 3218268 - 3218154
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  3218268 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggac 3218169  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  3218168 taattgtgtaatttt 3218154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 33595548 - 33595662
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || |||||||||    
T  33595548 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 33595647  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  33595648 taattgtgtaatttt 33595662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 4243151 - 4243279
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          |||||||  ||| ||||||||||||| || |||||||||    
T  4243151 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggac 4243250  T
Q  240 taattgtgtaattttacctttaatttatt 268  Q
    ||||||||||||||| |||  ||||||||    
T  4243251 taattgtgtaattttgcctaaaatttatt 4243279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33595407 - 33595512
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  33595407 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcctatgagt 33595505  T
Q  101 ttgatga 107  Q
    |||||||    
T  33595506 ttgatga 33595512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 6755145 - 6755259
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac-nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggac 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||          ||||| | |||| ||||||||||||| || |||||||||    
T  6755145 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggac 6755244  T
Q  240 taattgtgtaatttt 254  Q
    |||||||||||||||    
T  6755245 taattgtgtaatttt 6755259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6755005 - 6755110
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  6755005 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 6755103  T
Q  101 ttgatga 107  Q
    |||||||    
T  6755104 ttgatga 6755110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 14763534 - 14763664
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac---nnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaaggg 237  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||| ||            ||||||| |||| | ||||||||||| || |||||||    
T  14763534 aaaaaggataactatgttgttattttataacaaaaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtcttacctaaaataaagttaaggg 14763633  T
Q  238 actaattgtgtaattttacctttaatttatt 268  Q
    ||||||||||||||||| |||||| ||||||    
T  14763634 actaattgtgtaattttgcctttattttatt 14763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3218398 - 3218294
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| |||||||||||  ||||||       ||| |||||||||||||||||||| |||||||||||||||  ||||| ||||||||    
T  3218398 ttataaaatgacaatatcttatcattttt--atgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagt 3218301  T
Q  101 ttgatga 107  Q
    |||||||    
T  3218300 ttgatga 3218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 10810094 - 10810044
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac 191  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  10810094 aaaaaggataactatgttgttattttataacataaatgactaaatcgttac 10810044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4243011 - 4243116
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||  | |||||||||||||||  ||||| ||||||||    
T  4243011 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctagatttgtatgatgaagatttacgtttgcctatgagt 4243109  T
Q  101 ttgatga 107  Q
    |||||||    
T  4243110 ttgatga 4243116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 3218385 - 3218483
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  3218385 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 3218483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 3922595 - 3922536
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttaccttt 260  Q
    ||||||| |||| ||||||||||||| || |||||||||||||||||||||||| |||||    
T  3922595 taaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccttt 3922536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 3922783 - 3922881
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  3922783 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 3922881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 4243024 - 4242926
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||    
T  4243024 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaaggactaattgtgtaatttt 4242926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 33595420 - 33595322
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnn-taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||| ||||||||||||||||||||||||||| ||          ||||| | |||||||||||||||||| || ||||||||||||||||||||||||    
T  33595420 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaaatgttacctaaaataaagttaagggactaattgtgtaatttt 33595322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14763406 - 14763488
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagattt 84  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||||| |||||||||||||||    
T  14763406 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagattt 14763488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 10810232 - 10810128
Alignment:
Q  2 tataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtt 101  Q
    |||||||||||| |||||||| |||||| |||||||       |||||||||||||||||||||| | ||| ||| |||||||| |||||| |||||| |    
T  10810232 tataaaatgacaatattttattattttt-tatgagatttttt-caatgaaatttgattttctagggttgtacgataaagatttgcgtttgtgtatgagat 10810135  T
Q  102 tgatgaa 108  Q
    |||||||    
T  10810134 tgatgaa 10810128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 10810278 - 10810318
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10810278 tgttacctaaaattaaattaaaggactaattgtgtaatttt 10810318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3922796 - 3922691
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||  |||||||||| ||||  ||||| ||||||||    
T  3922796 ttataaaatgacaatatcttatcattttt-tatgagatgtttttcaaagaaatttgattttatatgcgtgtatgatgaaaatttacgtttgcctatgagt 3922698  T
Q  101 ttgatga 107  Q
    |||||||    
T  3922697 ttgatga 3922691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 22569021 - 22569078
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    |||||||  ||| |||||||||||||||| ||||||||||||  ||||||||||||||    
T  22569021 taaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttacct 22569078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23068955 - 23068850
Alignment:
Q  1 ttataaaatgacactattttatcatttttgtatgagannnnnnncaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagt 100  Q
    ||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||| || ||  |||||||||||||||  ||||  ||||||||    
T  23068955 ttataaaatgacaatatcttatcattttt-tatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgttttcctatgagt 23068857  T
Q  101 ttgatga 107  Q
    |||||||    
T  23068856 ttgatga 23068850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 23068942 - 23069045
Alignment:
Q  157 ttgttattttataacataaaggactaaatcgttacnnnnnnnnntaaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttac 256  Q
    |||| |||||||||||||||| |||||||||| ||         |||| || |||| ||||||||||||| || ||||| |||||||||||||||||| |    
T  23068942 ttgtcattttataacataaag-actaaatcgtgacaaaaaaagataaatgacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgc 23069040  T
Q  257 cttta 261  Q
    |||||    
T  23069041 cttta 23069045  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 21926120 - 21926056
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctttaattt 265  Q
    |||||||  ||| |||||||| ||||||| ||||||||||||  |||||||||| ||||||||||    
T  21926120 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcctttaattt 21926056  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 7808496 - 7808445
Alignment:
Q  202 aaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattt 253  Q
    ||||||||||| |||||||||||||| ||||| | ||| |||||||||||||    
T  7808496 aaaggatgaaagtgttacctaaaatttaattacgagacaaattgtgtaattt 7808445  T

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Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 10027125 - 10027176
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatt 252  Q
    |||||||  |||||||||||||||||||| ||||||||||| || |||||||    
T  10027125 taaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaatt 10027176  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 3105862 - 3105920
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaattttacctt 259  Q
    |||||||  ||| |||||||| ||||||||||||||||||||  ||| |||||||||||    
T  3105862 taaaggaccaaactgttacctgaaattaaattaagggactaaaagtgcaattttacctt 3105920  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 9220159 - 9220106
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  9220159 taaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 9220106  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 9546669 - 9546722
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  9546669 taaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 9546722  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 10026196 - 10026143
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  |||| ||||||||||||||| ||||||||||| || |||||||||    
T  10026196 taaaggactaaaacgttacctaaaattaagttaagggactatttatgtaatttt 10026143  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 13178481 - 13178522
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaa 242  Q
    |||||||  |||||||||||||||||||| ||||||||||||    
T  13178481 taaaggaccaaaatgttacctaaaattaagttaagggactaa 13178522  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 28852244 - 28852191
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    |||||||  ||| |||||||||||||||| ||||||||||||  ||||||||||    
T  28852244 taaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaatttt 28852191  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 30121586 - 30121639
Alignment:
Q  201 taaaggatgaaaatgttacctaaaattaaattaagggactaattgtgtaatttt 254  Q
    ||||||| |||| |||||||||||||||| |||| |||| || |||||||||||    
T  30121586 taaaggacgaaagtgttacctaaaattaatttaaaggacgaaatgtgtaatttt 30121639  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 8129804 - 8129852
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacctttaa 262  Q
    |||||||| ||||||| |||||||| ||| ||||||||||| |||||||    
T  8129804 tgttacctgaaattaagttaagggattaaatgtgtaattttgcctttaa 8129852  T

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Target: scaffold1577 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 990 - 940
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaatcgttac 191  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  990 aaaaaggataactatgttgttattttataacataaaggactaaatcgttac 940  T

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Target: scaffold1577; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 1174 - 1218
Alignment:
Q  214 tgttacctaaaattaaattaagggactaattgtgtaattttacct 258  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  1174 tgttacctaaaattaaattaaaggactaattgtgtaattttacct 1218  T

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Target: scaffold1577; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 1087 - 1024
Alignment:
Q  45 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatgaa 108  Q
    ||||||||| |||||||||||| | ||| ||| |||||||| ||||||||||||  ||||||||    
T  1087 caatgaaatgtgattttctagggttgtacgataaagatttgcgtttgtctatgaaattgatgaa 1024  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 15156 - 15112
Alignment:
Q  141 aaaaagggtaactatgttgttattttataacataaaggactaaat 185  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||    
T  15156 aaaaaggataactatgttgatattttataacataaagaactaaat 15112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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