View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14556_low_7 (Length: 415)

Name: NF14556_low_7
Description: NF14556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14556_low_7
NF14556_low_7
[»] chr5 (6 HSPs)
chr5 (1-305)||(8938986-8939290)
chr5 (3-192)||(29278862-29279051)
chr5 (344-399)||(8939329-8939384)
chr5 (344-399)||(8946862-8946917)
chr5 (17-117)||(4477288-4477388)
chr5 (17-183)||(19846147-19846313)
[»] chr4 (4 HSPs)
chr4 (1-179)||(10981940-10982117)
chr4 (16-147)||(3982728-3982859)
chr4 (1-112)||(47253352-47253463)
chr4 (16-107)||(39194160-39194251)
[»] chr7 (5 HSPs)
chr7 (2-252)||(9573191-9573442)
chr7 (151-255)||(13159583-13159688)
chr7 (18-247)||(12004549-12004779)
chr7 (77-117)||(16203873-16203913)
chr7 (77-117)||(16204442-16204482)
[»] chr1 (3 HSPs)
chr1 (1-149)||(43344314-43344460)
chr1 (1-60)||(8019023-8019082)
chr1 (61-189)||(18246257-18246387)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-194)||(149221-149414)
[»] chr2 (2 HSPs)
chr2 (1-110)||(45258059-45258168)
chr2 (2-112)||(45715071-45715181)
[»] chr8 (1 HSPs)
chr8 (19-179)||(37709166-37709326)
[»] chr6 (5 HSPs)
chr6 (1-117)||(34572894-34573010)
chr6 (1-60)||(22692167-22692226)
chr6 (1-43)||(9291994-9292036)
chr6 (1-43)||(15480315-15480357)
chr6 (77-117)||(14268582-14268622)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-60)||(18428-18486)


Alignment Details
Target: chr5 (Bit Score: 281; Significance: 1e-157; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 8938986 - 8939290
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  8938986 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatgcggcgtgtgattagggagcggttag 8939085  T
Q  101 aggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcgccttagtcagtgg 200  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8939086 aggacacatgtacggtgtttgatgcacggaggcgtgctctaatgtggtacggtgcactgacgttggcgtgttccttcaggcgatgcgccttagtcagtgg 8939185  T
Q  201 acgtttagtccacgtatcatcgttgtattgaccttctggccggtccagaacagttataacattattttctttgtctagtgttattagttttcataagttt 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8939186 acgtttagtccacgtatcatcgttgtattgaccttctggccagtccagaacagttataacattattttctttgtctagtgttattagttttcataagttt 8939285  T
Q  301 cgaac 305  Q
    |||||    
T  8939286 cgaac 8939290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 29279051 - 29278862
Alignment:
Q  3 gaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagag 102  Q
    ||||||||  |||||||| ||| ||||||||| ||||||||   ||| |||||||||| ||||| |||||||   |||||||||||||| ||||||||||    
T  29279051 gaatcatatcttgagggtaaagttaagtcacccttatataggcgtgtctgagaataaccgcctctgggatatggagcgtgtgattagggagcggttagag 29278952  T
Q  103 gacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcgcctta 192  Q
    ||||  |||| | ||  | |||||| ||||||||| ||| ||||||| |||||||||||| |||||||||| ||||| | ||||| ||||    
T  29278951 gacatgtgtatgatgattaatgcacggaggcgtgccctattgtggtacggtgcactgacgctggcgtgttctttcagacaatgcgtctta 29278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 344 - 399
Target Start/End: Original strand, 8939329 - 8939384
Alignment:
Q  344 caggaactatatggtttaggagctagaaggattggagtaattggtatgccaaatat 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8939329 caggaactatatggtttaggagctagaaggattggagtaattggtatgccaaatat 8939384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 399
Target Start/End: Original strand, 8946862 - 8946917
Alignment:
Q  344 caggaactatatggtttaggagctagaaggattggagtaattggtatgccaaatat 399  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||| ||||    
T  8946862 caggaactttatggtttaggagctagaagaattggagtaattggcatgccatatat 8946917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 4477288 - 4477388
Alignment:
Q  17 gggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggt 116  Q
    |||||||||||||||||| ||||||||   ||||||||||||| || | ||| || ||  |||| |||||||||  || ||| |||||||| ||||||||    
T  4477288 gggtgaagctaagtcacccttatataggcatgtgtgagaataattgtccccgtgagatgtggcgcgtgattaggaggccgttggaggacacgtgtacggt 4477387  T
Q  117 g 117  Q
    |    
T  4477388 g 4477388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 19846147 - 19846313
Alignment:
Q  17 gggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggt 116  Q
    |||||| |||||||||||  |||||||   | ||||||||||| ||||| || || || ||| |||||||||||  ||||||| | | ||  ||||||||    
T  19846147 gggtgatgctaagtcacccatatataggcgtatgtgagaataaatgccttcgtgagatgcggtgtgtgattaggaggcggttaaatggcatgtgtacggt 19846246  T
Q  117 gtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcga 183  Q
    |  ||||| |  | ||||||||||| |   ||| ||||||||||  |||| ||||||||||||||||    
T  19846247 gcttgatgtaaggtggcgtgctctagtcgagtaaggtgcactgatattggtgtgttccttcaggcga 19846313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 10981940 - 10982117
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttag 100  Q
    ||||||||||||||| ||| ||| |||||||||| |||||||||  |||||||||||||| ||||||||||||| |||| ||||||||||| ||||||||    
T  10981940 gtgaatcatacattg-gggagaaactaagtcacccttatatagacgtgtgtgagaataaccgcctccgggatatgcggcttgtgattagggagcggttag 10982038  T
Q  101 aggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcag 179  Q
    |||||||||||| ||||  ||| ||||  |||||||||||||||||| | ||||| | || | || | |||||||||||    
T  10982039 aggacacatgtatggtgattgacgcacgaaggcgtgctctaatgtgggacggtgcgccgaagctgacatgttccttcag 10982117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 3982728 - 3982859
Alignment:
Q  16 agggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacgg 115  Q
    ||||||||||||||||||| || |||||   |||||| ||||||| ||||||  ||||| | |||||||||||||| | | ||||||||| | |||| ||    
T  3982728 agggtgaagctaagtcacccttctataggcgtgtgtgggaataaccgcctccaagatatgcagcgtgtgattagggagtgattagaggacgcgtgtatgg 3982827  T
Q  116 tgtatgatgcacagaggcgtgctctaatgtgg 147  Q
    ||  ||||| | ||||| || |||||||||||    
T  3982828 tgattgatgtatagaggtgtactctaatgtgg 3982859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 47253352 - 47253463
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttag 100  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    |  ||| |||||||| ||||||| | | ||| |||||||||| | ||  ||||    
T  47253352 gtgaatcataccttgagggtgaagctaagtcacccttatataggcgcgcatgataataactgtctccgggttttgcggtgtgtgattagagagcaattag 47253451  T
Q  101 aggacacatgta 112  Q
    ||||||||||||    
T  47253452 aggacacatgta 47253463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 39194160 - 39194251
Alignment:
Q  16 agggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacac 107  Q
    |||||||| |||||||||| |||||||| |    ||||||||||| | |||||  ||||  ||||||||||||||| |||||||||||||||    
T  39194160 agggtgaaactaagtcacccttatataggtgcacgtgagaataaccgtctccgaaatatgtggcgtgtgattagggagcggttagaggacac 39194251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 9573442 - 9573191
Alignment:
Q  2 tgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttaga 101  Q
    ||||||||||||||  ||||||||||||||||| ||||||||   ||||| |||||||||   | || || || |||| ||||||||||  |||||||||    
T  9573442 tgaatcatacattggaggtgaagctaagtcacccttatataggaatgtgtaagaataactattttcgtgagatgcggcatgtgattaggaggcggttaga 9573343  T
Q  102 ggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcgccttagtc-agtgg 200  Q
    |||||| | || ||||  |||||||| ||||| ||||||| ||  ||| |||| ||| |  |||||||| ||||| ||| ||||  ||||||||  ||||    
T  9573342 ggacacctatatggtgcttgatgcacggaggcatgctctagtgaagtaaggtgtactaatattggcgtgctcctttaggggatgaaccttagtctggtgg 9573243  T
Q  201 acgtttagtccacgtatcatcgttgtattgaccttctggccggtccagaaca 252  Q
    ||||||||||||  | ||||| ||| ||||||||||  | ||||||||||||    
T  9573242 acgtttagtccatttgtcatcattggattgaccttcaagacggtccagaaca 9573191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 13159583 - 13159688
Alignment:
Q  151 ggtgcactgacgttggcgtgttccttcaggcgatgcgcctta-gtcagtggacgtttagtccacgtatcatcgttgtattgaccttctggccggtccaga 249  Q
    |||||||||| |||||||||||||||||||||  | |||||| | | ||| | ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  13159583 ggtgcactgatgttggcgtgttccttcaggcgtcgagccttaaggcggtgtatgtttagtccacgtgtcatcgttggattgaccttctggccggtccaga 13159682  T
Q  250 acagtt 255  Q
    ||||||    
T  13159683 acagtt 13159688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 12004779 - 12004549
Alignment:
Q  18 ggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtg 117  Q
    ||||||||||||||||| ||||||||   ||||||||||||||||| ||||  || | ||| | |||||||||   |||||| || | || || | ||||    
T  12004779 ggtgaagctaagtcacccttatataggcgtgtgtgagaataactgcttccgtaatttgcggagcgtgattaggagacggttaaagaatacgtgcatggtg 12004680  T
Q  118 tatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcgccttagtcag-tggacgtttagtccacgta 216  Q
    | ||||||||||| ||| |||||| || |||    |||| |||  ||||||||||||||||||||| | | ||||||| | || | ||||||||||||||    
T  12004679 tctgatgcacagaagcgcgctctagtgaggtgacatgcaatgatattggcgtgttccttcaggcgacgtgtcttagtctgatgaatgtttagtccacgta 12004580  T
Q  217 tcatcgttgtattgaccttctggccggtcca 247  Q
    |||  || | |||||||||||| ||| ||||    
T  12004579 tcacagtggaattgaccttctgaccgatcca 12004549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 16203873 - 16203913
Alignment:
Q  77 ggcgtgtgattagggtgcggttagaggacacatgtacggtg 117  Q
    ||||||||||||||| ||||||||||||||| |||| ||||    
T  16203873 ggcgtgtgattagggagcggttagaggacacgtgtagggtg 16203913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 16204442 - 16204482
Alignment:
Q  77 ggcgtgtgattagggtgcggttagaggacacatgtacggtg 117  Q
    ||||||||||||||| ||||||||||||||| |||| ||||    
T  16204442 ggcgtgtgattagggagcggttagaggacacgtgtagggtg 16204482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 43344460 - 43344314
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttag 100  Q
    |||||||||||||||  ||||||| ||| ||||| |||||||    ||||||||||||||||||||   || || |||||||||| |||| |||||||||    
T  43344460 gtgaatcatacattg--ggtgaagttaactcacccttatataagaatgtgtgagaataactgcctctacgagatgcggcgtgtgactaggatgcggttag 43344363  T
Q  101 aggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggta 149  Q
    || |||| |||||||| | ||||||||  ||| ||||||||||| ||||    
T  43344362 agaacacgtgtacggtatctgatgcacgaaggtgtgctctaatggggta 43344314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8019023 - 8019082
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 60  Q
    ||||||||||| ||| ||||||||||| |||||| ||||||||   ||||||||||||||    
T  8019023 gtgaatcataccttgggggtgaagctatgtcacccttatataggcgtgtgtgagaataac 8019082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 189
Target Start/End: Original strand, 18246257 - 18246387
Alignment:
Q  61 tgcctccgggatatacggcgtgtgattagggtgcggttagagg--acacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcact 158  Q
    |||||||| || || | ||||||||||||   ||||||||||   |||||||||||||   |||||| | ||||||| ||| ||||  ||| |||| |||    
T  18246257 tgcctccgcgagatgcagcgtgtgattagaaggcggttagagagaacacatgtacggtagctgatgcccggaggcgttctcaaatggagtaaggtgtact 18246356  T
Q  159 gacgttggcgtgttccttcaggcgatgcgcc 189  Q
    |   |||||||||||||||||||||||||||    
T  18246357 ggtattggcgtgttccttcaggcgatgcgcc 18246387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 149221 - 149414
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttag 100  Q
    ||||||||||| ||| |||||||| ||||||||| |||||||| | ||||  |||||||| || |||| || || ||| |  ||||||||  |||| |||    
T  149221 gtgaatcataccttgggggtgaagttaagtcacccttatataggtgtgtgctagaataaccgcttccgtgagatgcggagcatgattaggacgcgggtag 149320  T
Q  101 aggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcgccttagt 194  Q
    ||||||| || | |||||  ||||||| | | ||| ||  | || |||| ||||||||||  |||| || ||||||||| ||||||||||||||    
T  149321 aggacacgtgcatggtgtccgatgcacggggacgtacttcagtggggtaaggtgcactgatattggtgtattccttcagtcgatgcgccttagt 149414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45258168 - 45258059
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttag 100  Q
    ||||||||||| ||||||||||||| |||||||| |||||||| |    ||||  ||||| | ||||| | | | |||||||||||||||| ||||||||    
T  45258168 gtgaatcataccttgagggtgaagcaaagtcacccttatataggtcctcgtgacgataaccgtctccgagttttgcggcgtgtgattagggagcggttag 45258069  T
Q  101 aggacacatg 110  Q
    ||||||||||    
T  45258068 aggacacatg 45258059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 45715071 - 45715181
Alignment:
Q  2 tgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttaga 101  Q
    |||||||||| |||| ||||||||||||||||| || ||||     | ||||||||||||| ||| | |||||  ||||||||||||| | || ||||||    
T  45715071 tgaatcataccttgaaggtgaagctaagtcacccttgtataagcacgcgtgagaataactgtctctgagatatgtggcgtgtgattagagagcagttaga 45715170  T
Q  102 ggacacatgta 112  Q
    |||||||||||    
T  45715171 ggacacatgta 45715181  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 37709326 - 37709166
Alignment:
Q  19 gtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtgt 118  Q
    |||||| ||||||||| |||||| ||| | |||||||||||| || | || || ||  ||||  ||||||||  |||||||||||||||||||| |||||    
T  37709326 gtgaagttaagtcacctttatatggatgtatgtgagaataaccgctttcgtgagatgtggcgcatgattaggaggcggttagaggacacatgtatggtgt 37709227  T
Q  119 atgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcag 179  Q
     |||||||| | ||| ||||| | ||  ||| ||||||||||   ||||||||| ||||||    
T  37709226 ctgatgcacgggggcatgctccagtggagtaaggtgcactgatactggcgtgttacttcag 37709166  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34573010 - 34572894
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttag 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    ||||||||||||    ||||  ||||| || ||||||||||||| | | ||||    
T  34573010 gtgaatcatacattgagggtgaagttaagtcacccttatataggcgcgtgtgagaataatcatctccatgatatgcgacgtgtgattagggagtgattag 34572911  T
Q  101 aggacacatgtacggtg 117  Q
    ||||||| |||| ||||    
T  34572910 aggacacgtgtagggtg 34572894  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22692167 - 22692226
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 60  Q
    ||||||||||  |||||||||||||||||||||| |||||||| | ||||||||||||||    
T  22692167 gtgaatcataacttgagggtgaagctaagtcacctttatataggtgtgtgtgagaataac 22692226  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9292036 - 9291994
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatag 43  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||    
T  9292036 gtgaatcataccttgagggtgaagctaactcacctttatatag 9291994  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15480357 - 15480315
Alignment:
Q  1 gtgaatcatacattgagggtgaagctaagtcaccgttatatag 43  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||    
T  15480357 gtgaatcataccttgagagtgaagctaagtcacccttatatag 15480315  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 14268582 - 14268622
Alignment:
Q  77 ggcgtgtgattagggtgcggttagaggacacatgtacggtg 117  Q
    ||||||||||||||| ||||||||||||||| |||| ||||    
T  14268582 ggcgtgtgattagggagcggttagaggacacgtgtaaggtg 14268622  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 18486 - 18428
Alignment:
Q  2 tgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 60  Q
    |||||||||| ||  || ||||||||||||||| |||||||| | ||||||||||||||    
T  18486 tgaatcataccttcgggttgaagctaagtcacccttatataggtgtgtgtgagaataac 18428  T

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