View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14558_low_1 (Length: 495)

Name: NF14558_low_1
Description: NF14558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14558_low_1
NF14558_low_1
[»] scaffold0219 (3 HSPs)
scaffold0219 (240-480)||(15040-15272)
scaffold0219 (1-100)||(14814-14913)
scaffold0219 (116-169)||(14914-14968)
[»] chr5 (45 HSPs)
chr5 (240-358)||(38597566-38597684)
chr5 (250-358)||(7035996-7036104)
chr5 (257-353)||(25979931-25980027)
chr5 (285-340)||(26878325-26878380)
chr5 (240-358)||(13006997-13007115)
chr5 (287-353)||(11977186-11977252)
chr5 (240-344)||(38007140-38007244)
chr5 (285-352)||(15571260-15571327)
chr5 (285-352)||(26825203-26825270)
chr5 (240-358)||(6012340-6012458)
chr5 (291-345)||(13421725-13421779)
chr5 (240-345)||(31391959-31392064)
chr5 (295-350)||(7929975-7930030)
chr5 (248-341)||(6216679-6216773)
chr5 (285-358)||(24230033-24230107)
chr5 (241-337)||(11074103-11074199)
chr5 (240-352)||(9113927-9114039)
chr5 (250-341)||(34945207-34945298)
chr5 (3-68)||(6216975-6217040)
chr5 (4-65)||(11192459-11192520)
chr5 (3-68)||(15571563-15571628)
chr5 (295-340)||(41630297-41630342)
chr5 (285-352)||(4770912-4770979)
chr5 (2-68)||(14082341-14082407)
chr5 (311-353)||(14726741-14726783)
chr5 (2-68)||(31391698-31391764)
chr5 (3-68)||(13007306-13007371)
chr5 (3-68)||(34945470-34945535)
chr5 (7-44)||(39416087-39416124)
chr5 (1-106)||(10722794-10722905)
chr5 (13-68)||(1409575-1409630)
chr5 (1-68)||(7036296-7036363)
chr5 (13-68)||(28540862-28540917)
chr5 (1-68)||(41630579-41630646)
chr5 (296-358)||(8985195-8985257)
chr5 (3-98)||(13421974-13422075)
chr5 (2-68)||(38597874-38597940)
chr5 (108-161)||(11977002-11977055)
chr5 (302-351)||(14664152-14664201)
chr5 (108-161)||(14726528-14726581)
chr5 (11-44)||(17523362-17523395)
chr5 (4-44)||(374530-374570)
chr5 (108-160)||(6012205-6012257)
chr5 (12-44)||(6639242-6639274)
chr5 (1-65)||(26878052-26878116)
[»] scaffold0127 (1 HSPs)
scaffold0127 (240-358)||(15261-15379)
[»] chr8 (61 HSPs)
chr8 (240-353)||(31013771-31013884)
chr8 (250-350)||(27110674-27110774)
chr8 (240-351)||(45446011-45446122)
chr8 (256-353)||(10377473-10377570)
chr8 (240-350)||(37971074-37971181)
chr8 (283-337)||(23230436-23230490)
chr8 (1-160)||(16247165-16247340)
chr8 (240-341)||(17693814-17693914)
chr8 (285-350)||(25191311-25191376)
chr8 (278-339)||(33214869-33214930)
chr8 (288-344)||(3673231-3673287)
chr8 (287-351)||(8412596-8412660)
chr8 (3-161)||(17693558-17693732)
chr8 (278-341)||(7883478-7883541)
chr8 (240-338)||(28897502-28897600)
chr8 (2-68)||(37971363-37971429)
chr8 (288-345)||(27498583-27498640)
chr8 (250-341)||(8980985-8981076)
chr8 (2-68)||(20553184-20553250)
chr8 (2-68)||(20559687-20559753)
chr8 (2-68)||(20571249-20571315)
chr8 (291-341)||(36948688-36948738)
chr8 (240-345)||(40211505-40211611)
chr8 (3-68)||(33214615-33214680)
chr8 (11-68)||(36948389-36948446)
chr8 (243-341)||(1236896-1236994)
chr8 (303-341)||(18537629-18537667)
chr8 (2-68)||(23230723-23230789)
chr8 (287-341)||(24099507-24099561)
chr8 (14-68)||(41896597-41896651)
chr8 (304-341)||(1608242-1608279)
chr8 (250-335)||(14545113-14545198)
chr8 (252-341)||(15344094-15344183)
chr8 (252-341)||(15433159-15433248)
chr8 (252-341)||(15524463-15524552)
chr8 (288-345)||(20559992-20560049)
chr8 (288-345)||(20571554-20571611)
chr8 (278-339)||(29937905-29937966)
chr8 (11-68)||(40619025-40619082)
chr8 (11-67)||(10377770-10377826)
chr8 (285-345)||(20553490-20553550)
chr8 (12-68)||(28086766-28086822)
chr8 (4-68)||(40211247-40211311)
chr8 (297-341)||(41060482-41060526)
chr8 (250-342)||(41684220-41684312)
chr8 (240-339)||(7677480-7677579)
chr8 (21-68)||(18890661-18890708)
chr8 (296-351)||(29617713-29617768)
chr8 (250-340)||(1239613-1239703)
chr8 (3-61)||(3673528-3673586)
chr8 (13-67)||(7198149-7198203)
chr8 (2-44)||(7677226-7677268)
chr8 (2-44)||(9637352-9637394)
chr8 (2-68)||(16928700-16928766)
chr8 (14-68)||(43833951-43834005)
chr8 (11-44)||(10148199-10148232)
chr8 (1-65)||(471108-471172)
chr8 (25-65)||(8443477-8443517)
chr8 (66-110)||(28897741-28897785)
chr8 (3-67)||(31013552-31013616)
chr8 (5-65)||(33347467-33347527)
[»] scaffold0026 (1 HSPs)
scaffold0026 (250-358)||(72076-72184)
[»] chr6 (37 HSPs)
chr6 (240-352)||(33053370-33053482)
chr6 (240-358)||(12170265-12170383)
chr6 (250-353)||(3913786-3913888)
chr6 (250-353)||(32328795-32328898)
chr6 (285-358)||(68247-68320)
chr6 (256-345)||(605987-606076)
chr6 (1-160)||(3355088-3355263)
chr6 (248-345)||(32059692-32059789)
chr6 (240-353)||(34018335-34018448)
chr6 (290-361)||(9719644-9719715)
chr6 (290-345)||(9721762-9721817)
chr6 (1-68)||(29255390-29255457)
chr6 (240-338)||(30894427-30894524)
chr6 (290-359)||(9723631-9723700)
chr6 (3-67)||(606284-606348)
chr6 (240-344)||(23128402-23128506)
chr6 (240-326)||(29320064-29320150)
chr6 (288-345)||(29255692-29255749)
chr6 (1-98)||(127712-127815)
chr6 (1-65)||(4010456-4010520)
chr6 (250-341)||(4010712-4010803)
chr6 (2-106)||(30894635-30894744)
chr6 (2-68)||(7515147-7515213)
chr6 (240-337)||(7515403-7515501)
chr6 (3-106)||(34018595-34018704)
chr6 (3-68)||(23128697-23128762)
chr6 (3-68)||(30608461-30608526)
chr6 (11-44)||(35219747-35219780)
chr6 (14-65)||(1933649-1933700)
chr6 (1-68)||(8102805-8102872)
chr6 (1-68)||(20225930-20225997)
chr6 (1-68)||(22119914-22119981)
chr6 (2-68)||(3913519-3913585)
chr6 (2-68)||(12170547-12170613)
chr6 (14-67)||(546111-546164)
chr6 (298-350)||(11321695-11321747)
chr6 (305-345)||(14846330-14846370)
[»] chr3 (67 HSPs)
chr3 (250-358)||(48650947-48651055)
chr3 (256-358)||(36461649-36461751)
chr3 (240-345)||(33579650-33579755)
chr3 (289-358)||(43488848-43488917)
chr3 (260-353)||(45568666-45568759)
chr3 (240-353)||(47895925-47896038)
chr3 (240-352)||(10232845-10232957)
chr3 (240-352)||(21431400-21431511)
chr3 (248-352)||(35865144-35865247)
chr3 (249-345)||(38545617-38545713)
chr3 (250-345)||(40487107-40487202)
chr3 (240-352)||(9998241-9998354)
chr3 (240-353)||(32701272-32701385)
chr3 (250-359)||(40556479-40556588)
chr3 (260-337)||(12050870-12050947)
chr3 (240-359)||(6954898-6955017)
chr3 (285-352)||(10108013-10108080)
chr3 (285-352)||(10229249-10229316)
chr3 (1-68)||(23799854-23799921)
chr3 (240-355)||(47042254-47042369)
chr3 (240-358)||(12149984-12150102)
chr3 (252-353)||(23800123-23800227)
chr3 (285-341)||(9688481-9688537)
chr3 (285-352)||(43016630-43016697)
chr3 (240-353)||(54148765-54148875)
chr3 (2-68)||(12050593-12050659)
chr3 (291-344)||(9797780-9797833)
chr3 (240-317)||(20609099-20609176)
chr3 (285-345)||(31272054-31272114)
chr3 (278-341)||(21534048-21534111)
chr3 (250-344)||(26276005-26276099)
chr3 (2-68)||(46304465-46304531)
chr3 (250-352)||(50194495-50194597)
chr3 (285-358)||(36910902-36910975)
chr3 (285-334)||(52923362-52923411)
chr3 (4-68)||(45425669-45425733)
chr3 (1-68)||(19339253-19339319)
chr3 (290-353)||(20465219-20465281)
chr3 (303-358)||(20988020-20988075)
chr3 (14-65)||(35175484-35175535)
chr3 (2-68)||(21533754-21533820)
chr3 (248-341)||(629116-629209)
chr3 (285-350)||(953654-953719)
chr3 (3-68)||(7448860-7448925)
chr3 (3-68)||(7457002-7457067)
chr3 (3-68)||(10233147-10233212)
chr3 (11-68)||(32701568-32701625)
chr3 (3-161)||(40556680-40556844)
chr3 (3-68)||(52923063-52923128)
chr3 (4-68)||(45424875-45424939)
chr3 (301-345)||(46220460-46220504)
chr3 (1-64)||(19619795-19619857)
chr3 (1-64)||(20608843-20608906)
chr3 (3-45)||(4711582-4711624)
chr3 (25-67)||(26716075-26716117)
chr3 (287-341)||(29249029-29249083)
chr3 (2-68)||(43016932-43016998)
chr3 (2-44)||(43488535-43488577)
chr3 (66-132)||(46220677-46220743)
chr3 (14-68)||(51303600-51303654)
chr3 (108-161)||(6954763-6954816)
chr3 (3-44)||(21431714-21431755)
chr3 (3-68)||(26275765-26275830)
chr3 (291-351)||(7449155-7449214)
chr3 (291-351)||(7457297-7457356)
chr3 (250-341)||(38142357-38142448)
chr3 (285-341)||(53808109-53808165)
[»] chr4 (54 HSPs)
chr4 (250-341)||(26091125-26091216)
chr4 (240-345)||(2520579-2520684)
chr4 (240-341)||(54021667-54021768)
chr4 (240-351)||(21686443-21686553)
chr4 (240-358)||(53810817-53810935)
chr4 (240-353)||(19853714-19853826)
chr4 (285-353)||(13633908-13633976)
chr4 (250-352)||(9178152-9178254)
chr4 (250-351)||(26633882-26633983)
chr4 (240-352)||(4142956-4143068)
chr4 (250-345)||(10496144-10496239)
chr4 (250-353)||(22300639-22300742)
chr4 (240-353)||(45418323-45418433)
chr4 (250-352)||(48257661-48257763)
chr4 (240-349)||(22558667-22558776)
chr4 (285-358)||(22610973-22611046)
chr4 (285-353)||(5119132-5119200)
chr4 (285-345)||(9165290-9165350)
chr4 (278-341)||(33920858-33920921)
chr4 (240-353)||(24099272-24099386)
chr4 (250-336)||(43510010-43510096)
chr4 (289-358)||(51024712-51024781)
chr4 (240-352)||(35348101-35348213)
chr4 (1-68)||(45418610-45418677)
chr4 (3-68)||(4142698-4142763)
chr4 (3-68)||(22611281-22611346)
chr4 (288-345)||(29961179-29961236)
chr4 (3-68)||(32766612-32766677)
chr4 (3-68)||(53811126-53811191)
chr4 (278-351)||(56156793-56156866)
chr4 (285-341)||(53443932-53443988)
chr4 (1-106)||(54021914-54022025)
chr4 (2-68)||(21662535-21662601)
chr4 (2-68)||(21671299-21671365)
chr4 (2-68)||(24099012-24099078)
chr4 (14-68)||(27652042-27652096)
chr4 (259-353)||(51888437-51888531)
chr4 (13-68)||(21686198-21686253)
chr4 (1-68)||(33921152-33921219)
chr4 (14-65)||(38166187-38166238)
chr4 (294-345)||(52978621-52978672)
chr4 (14-44)||(6082267-6082297)
chr4 (14-44)||(20887594-20887624)
chr4 (21-67)||(29960913-29960959)
chr4 (14-44)||(36124185-36124215)
chr4 (3-65)||(36700377-36700439)
chr4 (2-68)||(56040591-56040657)
chr4 (108-161)||(11300058-11300111)
chr4 (3-68)||(19853458-19853523)
chr4 (250-315)||(29121890-29121954)
chr4 (108-161)||(32766503-32766556)
chr4 (11-44)||(43244215-43244248)
chr4 (285-353)||(9713695-9713763)
chr4 (12-44)||(13634237-13634269)
[»] chr7 (43 HSPs)
chr7 (240-345)||(42978392-42978497)
chr7 (240-353)||(8013667-8013780)
chr7 (240-351)||(13797133-13797244)
chr7 (240-351)||(30757021-30757132)
chr7 (240-345)||(37837660-37837765)
chr7 (285-345)||(45350439-45350499)
chr7 (250-345)||(9450349-9450444)
chr7 (250-353)||(40992958-40993060)
chr7 (240-337)||(12141510-12141607)
chr7 (240-353)||(39171794-39171907)
chr7 (1-110)||(46700067-46700182)
chr7 (290-353)||(4529855-4529918)
chr7 (240-341)||(34899809-34899907)
chr7 (240-341)||(19404956-19405057)
chr7 (278-358)||(39329033-39329113)
chr7 (285-337)||(48061214-48061266)
chr7 (1-68)||(19404701-19404768)
chr7 (2-106)||(37837403-37837513)
chr7 (2-106)||(42978646-42978756)
chr7 (3-68)||(30756765-30756830)
chr7 (240-352)||(19296655-19296767)
chr7 (1-68)||(12141252-12141319)
chr7 (2-68)||(8001491-8001557)
chr7 (3-106)||(13796875-13796984)
chr7 (259-341)||(25287402-25287484)
chr7 (286-359)||(38798562-38798633)
chr7 (2-68)||(39171535-39171601)
chr7 (2-68)||(47590391-47590457)
chr7 (240-345)||(48317014-48317119)
chr7 (257-353)||(25067862-25067958)
chr7 (285-341)||(47590102-47590158)
chr7 (285-332)||(9915941-9915988)
chr7 (285-332)||(9923853-9923900)
chr7 (287-326)||(24770058-24770097)
chr7 (106-161)||(24770217-24770272)
chr7 (285-351)||(5348830-5348896)
chr7 (14-44)||(9785571-9785601)
chr7 (14-68)||(22743024-22743078)
chr7 (14-68)||(24350796-24350850)
chr7 (2-44)||(28044701-28044743)
chr7 (14-68)||(35133027-35133081)
chr7 (11-68)||(19296950-19297007)
chr7 (313-341)||(5078668-5078696)
[»] chr2 (63 HSPs)
chr2 (240-353)||(7646256-7646369)
chr2 (250-360)||(35220108-35220215)
chr2 (240-353)||(36943326-36943439)
chr2 (240-358)||(4778532-4778650)
chr2 (240-358)||(7448027-7448145)
chr2 (240-358)||(12677498-12677616)
chr2 (240-352)||(11985432-11985544)
chr2 (250-358)||(27097617-27097725)
chr2 (250-353)||(4098887-4098990)
chr2 (240-358)||(43397321-43397439)
chr2 (240-341)||(7678080-7678181)
chr2 (240-345)||(31788248-31788353)
chr2 (285-345)||(1421463-1421523)
chr2 (240-340)||(18763265-18763365)
chr2 (282-341)||(42698919-42698978)
chr2 (256-337)||(5428086-5428167)
chr2 (3-68)||(31128727-31128792)
chr2 (281-345)||(29279814-29279877)
chr2 (285-341)||(31128995-31129051)
chr2 (1-68)||(25509013-25509080)
chr2 (240-345)||(9169460-9169564)
chr2 (240-341)||(4904338-4904439)
chr2 (3-68)||(29279517-29279582)
chr2 (4-44)||(15920122-15920162)
chr2 (3-106)||(17994677-17994778)
chr2 (4-68)||(36943069-36943133)
chr2 (250-326)||(37876810-37876886)
chr2 (287-338)||(17149966-17150017)
chr2 (1-68)||(29173665-29173732)
chr2 (13-68)||(30399992-30400047)
chr2 (285-335)||(8809084-8809134)
chr2 (288-350)||(13119995-13120057)
chr2 (287-341)||(41694411-41694465)
chr2 (3-68)||(4778841-4778906)
chr2 (3-44)||(7646590-7646631)
chr2 (301-358)||(17994979-17995036)
chr2 (3-68)||(37876553-37876618)
chr2 (8-45)||(40039145-40039182)
chr2 (291-339)||(4042230-4042278)
chr2 (278-341)||(28872003-28872064)
chr2 (304-339)||(8809001-8809036)
chr2 (14-65)||(10929756-10929807)
chr2 (13-44)||(11580972-11581003)
chr2 (287-338)||(39311143-39311194)
chr2 (2-68)||(1421764-1421830)
chr2 (2-44)||(4041540-4041582)
chr2 (2-68)||(11985179-11985245)
chr2 (1-67)||(14955618-14955684)
chr2 (2-68)||(31788544-31788610)
chr2 (297-350)||(36691653-36691707)
chr2 (288-338)||(37416501-37416551)
chr2 (288-322)||(38444982-38445016)
chr2 (4-61)||(4264567-4264624)
chr2 (3-44)||(7448359-7448400)
chr2 (3-44)||(9169205-9169246)
chr2 (3-68)||(19062299-19062364)
chr2 (11-68)||(33585690-33585747)
chr2 (116-169)||(37416678-37416731)
chr2 (3-68)||(38445254-38445319)
chr2 (12-68)||(7677829-7677885)
chr2 (108-160)||(18763448-18763500)
chr2 (285-345)||(25509314-25509373)
chr2 (290-334)||(36175693-36175737)
[»] chr1 (58 HSPs)
chr1 (255-358)||(35484595-35484698)
chr1 (285-358)||(7337910-7337983)
chr1 (250-358)||(34878483-34878591)
chr1 (250-353)||(51916864-51916967)
chr1 (240-345)||(44915430-44915536)
chr1 (240-345)||(45415344-45415449)
chr1 (250-350)||(10776672-10776772)
chr1 (278-345)||(26535185-26535252)
chr1 (263-345)||(21947843-21947924)
chr1 (285-350)||(27456320-27456385)
chr1 (256-353)||(31983957-31984054)
chr1 (285-349)||(5983617-5983681)
chr1 (250-337)||(11462660-11462747)
chr1 (285-335)||(41176977-41177027)
chr1 (11-106)||(44915676-44915777)
chr1 (240-337)||(29738838-29738935)
chr1 (285-341)||(18939111-18939167)
chr1 (250-341)||(44543062-44543153)
chr1 (250-352)||(3228048-3228150)
chr1 (14-68)||(13075612-13075666)
chr1 (287-341)||(14872428-14872482)
chr1 (250-359)||(1742052-1742161)
chr1 (1-65)||(16262945-16263009)
chr1 (1-61)||(26535437-26535497)
chr1 (262-341)||(940154-940233)
chr1 (1-68)||(51916610-51916676)
chr1 (2-68)||(14872720-14872786)
chr1 (240-338)||(15435074-15435172)
chr1 (108-169)||(940327-940388)
chr1 (3-68)||(5983917-5983982)
chr1 (250-331)||(7836978-7837059)
chr1 (3-68)||(21947564-21947629)
chr1 (2-161)||(23291587-23291762)
chr1 (2-63)||(31984247-31984308)
chr1 (243-352)||(32679304-32679413)
chr1 (15-68)||(36775668-36775721)
chr1 (250-339)||(49626701-49626790)
chr1 (285-341)||(21686662-21686718)
chr1 (250-358)||(45789337-45789445)
chr1 (285-340)||(569031-569085)
chr1 (250-353)||(12634944-12635047)
chr1 (1-68)||(27580072-27580139)
chr1 (262-337)||(31918772-31918847)
chr1 (8-39)||(38783320-38783351)
chr1 (285-340)||(43412162-43412217)
chr1 (2-68)||(3228350-3228416)
chr1 (2-44)||(4413219-4413261)
chr1 (2-68)||(10776406-10776472)
chr1 (14-44)||(47551343-47551373)
chr1 (108-161)||(1742253-1742306)
chr1 (280-337)||(4413097-4413154)
chr1 (4-61)||(32873811-32873868)
chr1 (3-44)||(35461995-35462036)
chr1 (297-358)||(35462297-35462358)
chr1 (108-160)||(7836863-7836915)
chr1 (286-322)||(31317559-31317595)
chr1 (243-311)||(32394818-32394886)
chr1 (12-44)||(46589396-46589428)
[»] scaffold0017 (2 HSPs)
scaffold0017 (240-358)||(32950-33068)
scaffold0017 (1-68)||(32691-32758)
[»] scaffold0884 (2 HSPs)
scaffold0884 (240-337)||(2174-2271)
scaffold0884 (2-68)||(1918-1984)
[»] scaffold0445 (1 HSPs)
scaffold0445 (241-352)||(1119-1230)
[»] scaffold0088 (2 HSPs)
scaffold0088 (240-358)||(50555-50673)
scaffold0088 (3-68)||(50854-50919)
[»] scaffold0634 (1 HSPs)
scaffold0634 (240-358)||(8283-8401)
[»] scaffold0087 (1 HSPs)
scaffold0087 (240-358)||(25531-25649)
[»] scaffold0262 (2 HSPs)
scaffold0262 (3-68)||(1765-1830)
scaffold0262 (285-341)||(2064-2120)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-110)||(71244-71359)
[»] scaffold0154 (1 HSPs)
scaffold0154 (289-336)||(25124-25171)
[»] scaffold0136 (2 HSPs)
scaffold0136 (278-345)||(37814-37881)
scaffold0136 (12-68)||(9997-10053)
[»] scaffold0121 (2 HSPs)
scaffold0121 (1-68)||(31218-31285)
scaffold0121 (287-332)||(31520-31565)
[»] scaffold0009 (1 HSPs)
scaffold0009 (250-341)||(58291-58382)
[»] scaffold0554 (1 HSPs)
scaffold0554 (285-334)||(10672-10721)
[»] scaffold0050 (1 HSPs)
scaffold0050 (3-68)||(65988-66053)
[»] scaffold0064 (1 HSPs)
scaffold0064 (285-341)||(19283-19338)
[»] scaffold0888 (1 HSPs)
scaffold0888 (14-68)||(1635-1689)
[»] scaffold0603 (1 HSPs)
scaffold0603 (250-323)||(7521-7594)


Alignment Details
Target: scaffold0219 (Bit Score: 148; Significance: 7e-78; HSPs: 3)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 240 - 480
Target Start/End: Original strand, 15040 - 15272
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||||| ||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  15040 tgtagagtggtgattctaggtcaaaaaataacctaaccccacacatcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctcac 15139  T
Q  340 tagaaatctagggcgggctgttagtttttcaaacaaatgattttaaaagtatctattacgatnnnnnnnnnnnnnnnngttacttataagttgtagttcc 439  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||||    
T  15140 tagaaatctagggtcggctgttagtttttcaaacaaatgattttaaaagtatctattacgat--------aaaaaaaagttacttataagttgtagttcc 15231  T
Q  440 ttcatttatgtgtgtgaattttttgttactattgttatttc 480  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  15232 ttcatttatgtgtatgaattttttgttactattgttatttc 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14814 - 14913
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttgactgatgtctacctttcaatatgaactaaacg 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||    
T  14814 tctaagtcatcgaaatactcatgtttccggatctgcaatgttgattcctaaatcattgattgaatttgactgatatcgatctttcaatacgaactaaacg 14913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 14914 - 14968
Alignment:
Q  116 aacgtcgc-acaagatgatgaacaataccacacctcacttagacgacagaatcac 169  Q
    |||||||| |||||| |||||||||||| || ||||||||||||||||| |||||    
T  14914 aacgtcgcgacaagacgatgaacaatacaacgcctcacttagacgacagcatcac 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 38597684 - 38597566
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| |||||||||||||||| |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  38597684 tgtagaggggtgattctaggtcaaaaaataacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 38597585  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  38597584 tagaaaactagggccggct 38597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 250 - 358
Target Start/End: Complemental strand, 7036104 - 7035996
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||||||||||||||||| || |||  |||| |  ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  7036104 tgattttaggtcaaaaaatgacctaaaaccaccccaccttgatgaatgaaggagaaagaaagtttagagagaagtttgagtttctctcactagaaaacta 7036005  T
Q  350 gggcgggct 358  Q
    |||| ||||    
T  7036004 gggccggct 7035996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 25980027 - 25979931
Alignment:
Q  257 aggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    |||||||||||| || | |  |||| ||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  25980027 aggtcaaaaaatgacctgaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcgctcactagaaaactagggc 25979931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 285 - 340
Target Start/End: Original strand, 26878325 - 26878380
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26878325 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 26878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 13007115 - 13006997
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  ||||   ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  13007115 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 13007016  T
Q  340 tagaaatctagggcgggct 358  Q
    || ||| ||||||| ||||    
T  13007015 taaaaaactagggccggct 13006997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 11977186 - 11977252
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  11977186 ctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcactagaaaactagggc 11977252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 344
Target Start/End: Complemental strand, 38007244 - 38007140
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | |||||  |||||||||||| || |||  |||| | ||||||||||| ||||||||||||||||||||||||||| |  ||||||||||||    
T  38007244 tgtagaggggtgattcgaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagattgagtttctctcac 38007145  T
Q  340 tagaa 344  Q
    |||||    
T  38007144 tagaa 38007140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 15571327 - 15571260
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctaggg 352  Q
    ||||||||||||||||||||||||||| || ||||||||||  |||||||||||||||||| ||||||    
T  15571327 tcctcgatgaatgaaggagaaagaaagcttggagagaagttagagtttctctcactagaaaactaggg 15571260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 26825270 - 26825203
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctaggg 352  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||    
T  26825270 tcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactaggg 26825203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 6012340 - 6012458
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| || |||||||||| || |||  |||| | ||||| ||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  6012340 tgtagaggggtgattctatgtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 6012439  T
Q  340 tagaaatctagggcgggct 358  Q
    || ||| || |||| ||||    
T  6012440 taaaaaactggggccggct 6012458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 13421779 - 13421725
Alignment:
Q  291 atgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  13421779 atgaatgaagaagaaagaaagtttaaagagaagttgaagtttctctcactagaaa 13421725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 31391959 - 31392064
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| || ||||||||||||||||||||||||||  | ||| ||||||    
T  31391959 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttagaatttttctcac 31392058  T
Q  340 tagaaa 345  Q
    ||||||    
T  31392059 tagaaa 31392064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 7930030 - 7929975
Alignment:
Q  295 atgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctag 350  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  7930030 atgaaggagaaagaaagtttagagagaatttggagtttctctcactagaaaactag 7929975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 341
Target Start/End: Complemental strand, 6216773 - 6216679
Alignment:
Q  248 gatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaag-ttgaagtttctctcacta 341  Q
    ||||||||||||||||| ||| || |||  |||| ||||||||||||| ||| |||||| |||||||||||||||| ||  ||||||||||||||    
T  6216773 gatgattttaggtcaaagaatgacctaaaaccacccatcctcgatgaacgaatgagaaataaagtttagagagaagttttgagtttctctcacta 6216679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 24230033 - 24230107
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagttt-agagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||||||| |||| | ||||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||    
T  24230033 tcctcgatgaacgaagaacaaagaaagttttagagagaagttggagtttctctcactagaaaactagggccggct 24230107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 11074103 - 11074199
Alignment:
Q  241 gtagagtgatgattttaggtcaaaaaataacttaactccactca-tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    |||||||||||||| ||||||||||| |||| |||  |||| |  ||||||||||| || |||||||||||||||||||| |||||| ||||||||||    
T  11074103 gtagagtgatgattctaggtcaaaaa-taacctaaaaccaccctctcctcgatgaacgagggagaaagaaagtttagagaaaagttggagtttctctc 11074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 9113927 - 9114039
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||| ||||||| || |||   ||| | ||||||||||| ||| |||||||||||||||||||||||||  ||||||||  ||    
T  9113927 tgtagaggggtgattctaggttaaaaaatgacctaaaatcacccctcctcgatgaacgaaagagaaagaaagtttagagagaagttagagtttctcctac 9114026  T
Q  340 tagaaatctaggg 352  Q
    |||||| ||||||    
T  9114027 tagaaaactaggg 9114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 34945298 - 34945207
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||| ||||||||||||| || |||  |||  | || |||||||| |||||||||||||||||||||||||| ||| |||||||| |||||    
T  34945298 tgattctaggtcaaaaaatgacctaaaaccatccttcttcgatgaacgaaggagaaagaaagtttagagagaatttggagtttctcccacta 34945207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 6217040 - 6216975
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| ||||| ||||||||||||||  || |||||||||||||||||||    
T  6217040 taagtcaccgaaatacacatgcttccgaatctgcaacgttgacgcccaaatcattgattgaatttg 6216975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 11192520 - 11192459
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    |||| |||||||||||||||||||||||||| |||||||||  || |||||||| |||||||    
T  11192520 aagtgatcgaaatactcatgtttccggatctacaacgttgacacccaaatcatttattgaat 11192459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 15571628 - 15571563
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||  ||| |||||||| ||||||||||||||||||||  || |||||||||||||||||||    
T  15571628 taagtcactgaactactcatgcttccggatctgcaacgttgacacccaaatcattgattgaatttg 15571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 41630342 - 41630297
Alignment:
Q  295 atgaaggagaaagaaagtttagagagaagttgaagtttctctcact 340  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  41630342 atgaatgagaaagaaagcttagagagaagttgaagtttctctcact 41630297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 4770979 - 4770912
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctaggg 352  Q
    |||||||| || |||| ||||||||||||||||||||||||  ||||||||||  |||||| ||||||    
T  4770979 tcctcgattaacgaagaagaaagaaagtttagagagaagttagagtttctctcggtagaaaactaggg 4770912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 14082341 - 14082407
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||| || ||||| ||| ||| |||||    
T  14082341 ctaagtcattgaaatacccatgcttccggatctgcaacgttgatgcccaaatctttggttggatttg 14082407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 353
Target Start/End: Original strand, 14726741 - 14726783
Alignment:
Q  311 gtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  14726741 gtttagagagaagttaaagtttctctcactagaaaactagggc 14726783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 31391698 - 31391764
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||  || ||||||||| |||||||||    
T  31391698 ctaagtcaccgaaatactcatccttctggatctgcaacgttgacgcccaaatcattggttgaatttg 31391764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 13007371 - 13007306
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  13007371 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 13007306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 34945535 - 34945470
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  34945535 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 34945470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 39416087 - 39416124
Alignment:
Q  7 tcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  39416087 tcatcgaaatactcatgtttccggatctgcagcgttga 39416124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10722905 - 10722794
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatt------tgactgatgtctacctttcaatatgaac 94  Q
    ||||||||| |||||||| |||| ||  |||||| |||||||||  || |||||||||||||||||      ||||||| ||| | ||||||||| ||||    
T  10722905 tctaagtcaccgaaatacccatgcttttggatctacaacgttgacgcccaaatcattgattgaatttttaaatgactgaagtcgatctttcaataggaac 10722806  T
Q  95 taaacgtacacc 106  Q
    |||||| |||||    
T  10722805 taaacgaacacc 10722794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 1409630 - 1409575
Alignment:
Q  13 aaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| |||||||| |||||||||||| ||||  | ||||||||||||||||||||    
T  1409630 aaatattcatgttttcggatctgcaacattgacgcataaatcattgattgaatttg 1409575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7036363 - 7036296
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||| |||| || |||||||||||||||||  || ||||||| |||| ||||||    
T  7036363 tctaagtcctcgaaatacccatgctttcggatctgcaacgttgacgcccaaatcatagattcaatttg 7036296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 28540862 - 28540917
Alignment:
Q  13 aaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||| |||| ||| ||||||||||||||||  || |||||||||||||||||||    
T  28540862 aaatacccatgcttctggatctgcaacgttgacgcccaaatcattgattgaatttg 28540917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41630646 - 41630579
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||  ||||||| |||| ||| |||| |||||||||||  || |||||||||||||||||||    
T  41630646 tctaagtcacggaaatacacatgcttctggatgtgcaacgttgacgcccaaatcattgattgaatttg 41630579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 8985195 - 8985257
Alignment:
Q  296 tgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    |||| ||||| ||||  |||||||||||||| |||||||||||||| ||| ||||||| ||||    
T  8985195 tgaaagagaacgaaaacttagagagaagttggagtttctctcactaaaaagctagggccggct 8985257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 13422075 - 13421974
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaacta 96  Q
    ||||||| |||||||| |||| ||| | ||||||||| ||||  || ||||||||||||||||      |||||||||||| | ||||||||| ||||||    
T  13422075 taagtcaccgaaatacacatgcttcagaatctgcaacattgacgcccaaatcattgattgaatttgtaattgactgatgtcgatctttcaataggaacta 13421976  T
Q  97 aa 98  Q
    ||    
T  13421975 aa 13421974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 38597940 - 38597874
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||  ||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  38597940 ctaagtcactgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 38597874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 11977002 - 11977055
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    ||||||||||||||| |||||| || ||||||||| || || ||||||||||||    
T  11977002 cgaaatcaaacgtcgtacaagacgacgaacaatacaacgccacacttagacgac 11977055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 351
Target Start/End: Complemental strand, 14664201 - 14664152
Alignment:
Q  302 agaaagaaagtttagagagaagttgaagtttctctcactagaaatctagg 351  Q
    ||||||| | |||||||||||| ||||||||||||||||| ||| |||||    
T  14664201 agaaagataatttagagagaagatgaagtttctctcactaaaaaactagg 14664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 14726528 - 14726581
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    ||||||||||| |||||||||| || |||||| || ||||| ||||||||||||    
T  14726528 cgaaatcaaacatcgcacaagacgacgaacaacacaacaccgcacttagacgac 14726581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 17523362 - 17523395
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||||| |||||||||||||||||    
T  17523362 cgaaatactcatgttttcggatctgcaacgttga 17523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 374570 - 374530
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  374570 aagtcatcgaaatacttatgttttcggatctacaacgttga 374530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 6012205 - 6012257
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacga 160  Q
    |||||||||||| ||||||||| || |||||| || ||||| |||||||||||    
T  6012205 cgaaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacga 6012257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 6639274 - 6639242
Alignment:
Q  12 gaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||||||||||||||||| |||||||||||    
T  6639274 gaaatactcatgtttccggatgtgcaacgttga 6639242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26878052 - 26878116
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||||||| | |||||| |||| ||| |||||||||| |||||  || ||||||||||||||||    
T  26878052 tctaagtcaccaaaatacccatgcttctggatctgcaatgttgacgcccaaatcattgattgaat 26878116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 15379 - 15261
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  15379 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgaagaacgaaggagaaagaaagtttagagagaagttgaagtttctctcac 15280  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  15279 tagaaaactagggccggct 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 6e-29; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 31013771 - 31013884
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  31013771 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 31013870  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  31013871 tagaaaactagggc 31013884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 350
Target Start/End: Original strand, 27110674 - 27110774
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||||||| ||||||||| || |||  |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  27110674 tgattttagatcaaaaaatgacctaaaaccacccatcttcgatgaatgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaacta 27110773  T
Q  350 g 350  Q
    |    
T  27110774 g 27110774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 45446011 - 45446122
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| ||||||| || |||||||||| || |||  | || | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  45446011 tgtagagagatgattctatgtcaaaaaatgacataaaactacccttcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 45446110  T
Q  340 tagaaatctagg 351  Q
    |||||| |||||    
T  45446111 tagaaaactagg 45446122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 10377570 - 10377473
Alignment:
Q  256 taggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||||||| || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  10377570 taggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagggc 10377473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 37971181 - 37971074
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  ||||||   |||||||||||||| ||||||||| ||||||||||||||| |||||||||||     
T  37971181 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactc---ctcgatgaatgaagaagaaagaaaatttagagagaagttggagtttctctcat 37971085  T
Q  340 tagaaatctag 350  Q
    |||||| ||||    
T  37971084 tagaaaactag 37971074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 23230490 - 23230436
Alignment:
Q  283 catcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  23230490 catcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 23230436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 16247165 - 16247340
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg------actgatgtctacctttcaatatgaac 94  Q
    ||||||||| |||||||| |||| ||||||||||||||| ||||| || |||||||||||||||||||      | ||||||| | ||||| ||| ||||    
T  16247165 tctaagtcagcgaaatacccatgcttccggatctgcaacattgatgcccaaatcattgattgaatttgtaattaattgatgtcgatctttccataggaac 16247264  T
Q  95 taaacgtacaccac----------gaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacga 160  Q
    |||||| ||||| |          ||||||||||||||||||||| ||||||||| || || || |||||||||||    
T  16247265 taaacgaacaccgcgacaagacgtgaaatcaaacgtcgcacaagacgatgaacaacacaacgccgcacttagacga 16247340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 17693814 - 17693914
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| ||||||| ||||||||||| | || |||  | || | ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17693814 tgtagagggatgattctaggtcaaaaa-tgacctaaaacaacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 17693912  T
Q  340 ta 341  Q
    ||    
T  17693913 ta 17693914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 25191311 - 25191376
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctag 350  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  25191311 tcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactaaaaaactag 25191376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 33214869 - 33214930
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  33214869 ccacccatcctcgatgaacgaaggagaaagaaagtttagagagaaattgaagtttgtctcac 33214930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 3673287 - 3673231
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaa 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  3673287 tcgatgaataaaggagaaagaaagtttagagagaagttgaagtttctttcaccagaa 3673231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 8412596 - 8412660
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagg 351  Q
    ||||||||| ||| |||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  8412596 ctcgatgaacgaatgagaaagaaagtttagagagaagttagagtttctctcactagaaaactagg 8412660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 17693558 - 17693732
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaacta 96  Q
    ||||||||||||||||||||| |||||||||||||| |||||  || ||||||||| ||||||      |||||||||||| | |||| |||| ||||||    
T  17693558 taagtcatcgaaatactcatgcttccggatctgcaatgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatcttttaataggaacta 17693657  T
Q  97 aacgtacaccacg----------aaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    |||  ||||| ||          |||||||||| ||||||||| || ||||||||| ||||| ||||||||||||    
T  17693658 aacaaacaccgcgacaaaacgcaaaatcaaacgccgcacaagaagacgaacaatacaacaccgcacttagacgac 17693732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 7883478 - 7883541
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||| |||||||| ||| |||||||||| |||||| |||||||||||||||||||||||    
T  7883478 ccactcatcatcgatgaacgaatgagaaagaaaatttagaaagaagttgaagtttctctcacta 7883541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 28897600 - 28897502
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    ||||||| | ||||||||| ||||||||| ||||||  |||| | ||||||| |||||||| |||| || |||||| | ||||||||||||||||||||    
T  28897600 tgtagaggggtgattttagatcaaaaaatgacttaaaaccacccctcctcgacgaatgaagaagaacgagagtttaaaaagaagttgaagtttctctca 28897502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 37971429 - 37971363
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||||||||||||||||||||||||||||   | ||||||||| |||||||||    
T  37971429 ctaagtcaccgaaatactcatgtttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 37971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 27498583 - 27498640
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||    
T  27498583 tcgatgaatgaaggagaaagaaagcttaaagataagttgaagtttctctcacttgaaa 27498640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 8981076 - 8980985
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||||||||| || |||  |||| | ||||||| || |||| ||||| ||||  |||||||||||||| ||||||||||||||    
T  8981076 tgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgagtgaatgagaacgaaaacttagagagaagttggagtttctctcacta 8980985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 20553184 - 20553250
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  20553184 ctaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 20553250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 20559687 - 20559753
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  20559687 ctaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 20559753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 20571249 - 20571315
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  20571249 ctaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 20571315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 36948688 - 36948738
Alignment:
Q  291 atgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  36948688 atgaataaaggagaaagaaagtttaaagagaagttgaagtttgtctcacta 36948738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 40211505 - 40211611
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaa-taacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    ||||||| | ||||| |||||||||||| | || |||  |||| | |||||||| || |||||||||||||| |||| |||||| ||| |||||||||||    
T  40211505 tgtagaggggtgattctaggtcaaaaaaattacctaaagccacccctcctcgattaacgaaggagaaagaaattttaaagagaaattggagtttctctca 40211604  T
Q  339 ctagaaa 345  Q
    |||||||    
T  40211605 ctagaaa 40211611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 33214615 - 33214680
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||||||| | |||| ||||||||||||||||||||  || ||||||||| |||||||||    
T  33214615 taagtcatcgaaattcacatgcttccggatctgcaacgttgaagcccaaatcattggttgaatttg 33214680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 36948389 - 36948446
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||||||| |||||||| |||||| |||  |||||||||||||||||||||||    
T  36948389 cgaaatactcatgcttccggatttgcaacattgcatcctaaatcattgattgaatttg 36948446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 341
Target Start/End: Original strand, 1236896 - 1236994
Alignment:
Q  243 agagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||| ||| ||||||||||||| ||| || |||  |||| | ||||| ||||  ||| ||||| ||||  |||||||||||||||||||||||||||||    
T  1236896 agagggattattttaggtcaaagaatgacctaaaaccacccctcctcaatgagcgaaagagaaggaaaacttagagagaagttgaagtttctctcacta 1236994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 18537629 - 18537667
Alignment:
Q  303 gaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  18537629 gaaagaaagtttagagaaaagttgaagtttctctcacta 18537667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 23230789 - 23230723
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| |||| ||||||||||||||||||||  || || |||||| |||||||||    
T  23230789 ctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgcccaagtcattggttgaatttg 23230723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 24099507 - 24099561
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||| |||| ||||||||||   ||||||||||||||||||||||||||||    
T  24099507 ctcgatgattgaaagagaaagaaaacctagagagaagttgaagtttctctcacta 24099561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 41896651 - 41896597
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||| |||  |||||||||||||||| ||||||||||| ||||||||||    
T  41896651 aatactcatgcttctagatctgcaacgttgatgcctaaatcattaattgaatttg 41896597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 1608242 - 1608279
Alignment:
Q  304 aaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1608242 aaagaaagtttagagagaagttaaagtttctctcacta 1608279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 14545113 - 14545198
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctc 335  Q
    ||||||||||||||||||| || |||  |||||||||||  | ||||||||||||||     ||||||||||||||| ||||||||    
T  14545113 tgattttaggtcaaaaaatgacctaaaaccactcatccttaacgaatgaaggagaaattttttttagagagaagttggagtttctc 14545198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 341
Target Start/End: Complemental strand, 15344183 - 15344094
Alignment:
Q  252 attttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||| ||| || |||  |||| | |||||||||| |||| |||||  |||  |||||||||||||| ||||||||||||||    
T  15344183 attttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcacta 15344094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 341
Target Start/End: Complemental strand, 15433248 - 15433159
Alignment:
Q  252 attttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||| ||| || |||  |||| | |||||||||| |||| |||||  |||  |||||||||||||| ||||||||||||||    
T  15433248 attttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcacta 15433159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 341
Target Start/End: Complemental strand, 15524552 - 15524463
Alignment:
Q  252 attttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||| ||| || |||  |||| | |||||||||| |||| |||||  |||  |||||||||||||| ||||||||||||||    
T  15524552 attttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcacta 15524463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 20559992 - 20560049
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||| |||| ||||| |||||||||||||||||||  ||||||||| |||||||    
T  20559992 tcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccctagaaa 20560049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 20571554 - 20571611
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||| |||| ||||| |||||||||||||||||||  ||||||||| |||||||    
T  20571554 tcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccctagaaa 20571611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 29937966 - 29937905
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    |||| ||||||| ||||| |||| |||||||||||||| |||||| ||| ||||||||||||    
T  29937966 ccacccatcctcaatgaacgaagtagaaagaaagtttaaagagaaattggagtttctctcac 29937905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 40619025 - 40619082
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||||||| ||| ||||||||||||||||  || |||| ||||||||||||||    
T  40619025 cgaaatactcatgcttctggatctgcaacgttgacgcccaaattattgattgaatttg 40619082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 10377826 - 10377770
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    |||||||| |||| |||||||||||||||||||||  | ||||||||| ||||||||    
T  10377826 cgaaatacccatgcttccggatctgcaacgttgatgtccaaatcattggttgaattt 10377770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 20553490 - 20553550
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||||| |||| ||||| |||||||| ||||||||||  ||||||||| |||||||    
T  20553490 tcctcgatgaacgaagaagaaaaaaagtttaaagagaagttggtgtttctctccctagaaa 20553550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 28086766 - 28086822
Alignment:
Q  12 gaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||  |||||| ||||||||||||||||| | | |||||||||||||||||||    
T  28086766 gaaataccaatgtttacggatctgcaacgttgacttccaaatcattgattgaatttg 28086822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 40211247 - 40211311
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||| ||||||||||||| |||||||||| |||||||||  || ||||||||| | |||||||    
T  40211247 aagtcaacgaaatactcatgcttccggatctacaacgttgacgcccaaatcattggtggaatttg 40211311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 41060482 - 41060526
Alignment:
Q  297 gaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||||||||| |||||||||| | |||||||||||||||||    
T  41060482 gaaggagaaagaaattttagagagatgatgaagtttctctcacta 41060526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 342
Target Start/End: Complemental strand, 41684312 - 41684220
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactag 342  Q
    ||||||||||| ||||| | || |||  ||||| | |||  |||||||||||||||||||||  || || ||||||| |||||||||||||||    
T  41684312 tgattttaggttaaaaactgacctaaaaccacttaccctttatgaatgaaggagaaagaaagcctaaagggaagttggagtttctctcactag 41684220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 7677480 - 7677579
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||| ||||| |||| ||||||||| ||||||||||| ||  ||||| ||||||    
T  7677480 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaagaagaaagaaaatttagagagaaattagagtttatctcac 7677579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 18890661 - 18890708
Alignment:
Q  21 atgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||||||  || |||||||||||||||||||    
T  18890661 atgtttctggatctgcaacgttgacgcccaaatcattgattgaatttg 18890708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 29617713 - 29617768
Alignment:
Q  296 tgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagg 351  Q
    |||| |||||| ||| ||||||||||||||||| |||||||||||| ||| |||||    
T  29617713 tgaaagagaaacaaaatttagagagaagttgaaatttctctcactaaaaaactagg 29617768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 340
Target Start/End: Original strand, 1239613 - 1239703
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 340  Q
    ||||||||||||||| ||  || |||  |||| | ||||||||||  | | ||||| ||||  ||||||||||||||||||||||||||||    
T  1239613 tgattttaggtcaaagaaggacctaaaaccacccctcctcgatgagcggaagagaaggaaaacttagagagaagttgaagtttctctcact 1239703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 3673586 - 3673528
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgatt 61  Q
    |||||||  |||||||||||| ||||||||||||||||||||  || ||| ||||||||    
T  3673586 taagtcactgaaatactcatgcttccggatctgcaacgttgacgcccaaagcattgatt 3673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 7198149 - 7198203
Alignment:
Q  13 aaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    ||||| ||||| ||||||||||||||||||||   | ||||||||||||||||||    
T  7198149 aaatattcatgcttccggatctgcaacgttgacatccaaatcattgattgaattt 7198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 7677226 - 7677268
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||    
T  7677226 ctaagtcaccgaaatattcatgcttccggatctgcaacgttga 7677268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 9637352 - 9637394
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||| | ||||||||||||||||||| ||||||||||||||    
T  9637352 ctaagttaccgaaatactcatgtttccgaatctgcaacgttga 9637394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 16928700 - 16928766
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| || | || ||||||||||||||||||  | ||||||||| |||||||||    
T  16928700 ctaagtcaccgaaatacccacgctttcggatctgcaacgttgatgtccaaatcattggttgaatttg 16928766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 43833951 - 43834005
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||| |||  |||||||||||||||   |||||||||||||||||||||    
T  43833951 aatactcatgcttctagatctgcaacgttgacgtctaaatcattgattgaatttg 43834005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 10148232 - 10148199
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||| |||||||||||||||||||    
T  10148232 cgaaatactcatgtctccggatctgcaacgttga 10148199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 471108 - 471172
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||| |||||  ||||| |||| ||||||||||||||||||||  |  ||||||||||||||||    
T  471108 tctaaatcatcagaatacccatgcttccggatctgcaacgttgacgcacaaatcattgattgaat 471172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 8443477 - 8443517
Alignment:
Q  25 ttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    |||||||||||||||||||||  | ||||||||||||||||    
T  8443477 ttccggatctgcaacgttgatgtccaaatcattgattgaat 8443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 28897785 - 28897741
Alignment:
Q  66 ttgactgatgtctacctttcaatatgaactaaacgtacaccacga 110  Q
    |||||||||||| | ||||||||| |||||||||| |||||||||    
T  28897785 ttgactgatgtcgatctttcaataggaactaaacgaacaccacga 28897741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 31013552 - 31013616
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    |||||||  ||||||| |||| ||||| ||||||||||||||   | ||||||||||||||||||    
T  31013552 taagtcactgaaatacacatgcttccgaatctgcaacgttgacgtccaaatcattgattgaattt 31013616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 33347467 - 33347527
Alignment:
Q  5 agtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||| |||||||| |||| || |||||| ||||||| ||  |||||||||||||||||||    
T  33347467 agtcaccgaaatacccatgctttcggatccgcaacgtcgacgcctaaatcattgattgaat 33347527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 358
Target Start/End: Original strand, 72076 - 72184
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  72076 tgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctcccactagaaaacta 72175  T
Q  350 gggcgggct 358  Q
    |||| ||||    
T  72176 gggccggct 72184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 33053370 - 33053482
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| ||||||| ||||||||||||| || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  33053370 tgtagagggatgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 33053469  T
Q  340 tagaaatctaggg 352  Q
    |||||| ||||||    
T  33053470 tagaaaactaggg 33053482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 12170383 - 12170265
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  12170383 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtctagagagaagttggagtttctctcac 12170284  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  12170283 tagaaaactagggccggct 12170265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 3913786 - 3913888
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  3913786 tgattctaggtcaaaaaatgacctaaaaccaccc-tcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaacta 3913884  T
Q  350 gggc 353  Q
    ||||    
T  3913885 gggc 3913888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 32328795 - 32328898
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||| | ||||||  |||| | ||||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||| |||    
T  32328795 tgattataggtcaaaaactgacttaaaaccacccctcctcgatgaacgaaggagaaagaaagtatagagagaagttagagtttctctcactagaaaacta 32328894  T
Q  350 gggc 353  Q
    ||||    
T  32328895 gggc 32328898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 68247 - 68320
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||  |||| ||| ||||||| ||||    
T  68247 tcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcctactaaaaaactagggccggct 68320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 606076 - 605987
Alignment:
Q  256 taggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||||||| || |||   ||| | ||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  606076 taggtcaaaaaatgacataaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagaaaagttggagtttctcccactagaaa 605987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 3355263 - 3355088
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaattt------gactgatgtctacctttcaatatgaac 94  Q
    |||||||||  |||||||||||| |||||||||||||| |||||   | |||||||| |||||||||      |||||||||| ||||||||||| ||||    
T  3355263 tctaagtcactgaaatactcatgcttccggatctgcaaagttgacgtccaaatcattcattgaatttataattgactgatgtcgacctttcaataggaac 3355164  T
Q  95 taaacgtacacca----------cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacga 160  Q
    |||||| ||||||          |||||||||||||| ||||||| || |||||| || ||||| |||||||||||    
T  3355163 taaacgaacaccacaacaagacgcgaaatcaaacgtcacacaagaggacgaacaacacaacaccgcacttagacga 3355088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 32059789 - 32059692
Alignment:
Q  248 gatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||| ||||||||| ||| ||||||  ||||  |||||||||||||||| ||||||||| ||||| |||||| ||| | ||||||||||||||||    
T  32059789 gatgattctaggtcaaacaatgacttaaaaccacctatcctcgatgaatgaaagagaaagaatgtttaaagagaacttggaatttctctcactagaaa 32059692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 34018448 - 34018335
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  ||   ||||||||||||| ||||||||||||||||||||| | || |||||| |||||||||    
T  34018448 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccttccatcctcgatgaacgaaggagaaagaaagtttagacaaaaattgaagcttctctcac 34018349  T
Q  340 tagaaatctagggc 353  Q
    | |||| |||||||    
T  34018348 tggaaaactagggc 34018335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 9719644 - 9719715
Alignment:
Q  290 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggctgtt 361  Q
    |||||| ||| |||||||||||||||||||||||||| |||||||||||| ||||| ||| ||| |||||||    
T  9719644 gatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcacaagaaaactatggccggctgtt 9719715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 9721762 - 9721817
Alignment:
Q  290 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  9721762 gatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcactagaaa 9721817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29255390 - 29255457
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||  || |||||||||||||||||||    
T  29255390 tctaagtcaccgaaatacccatgtttccggatctgtaacgttgacgcccaaatcattgattgaatttg 29255457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 30894524 - 30894427
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    ||||||| | ||||| ||||||||||||| |  |||  |||| | |||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  30894524 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgattaacgaaggagaaa-aaagtttagagagaagttgaagtttctctca 30894427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 9723631 - 9723700
Alignment:
Q  290 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggctg 359  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||| ||| ||| |||||    
T  9723631 gatgaacgaacgagaaagaaagtttagagagaagttggagtttctttcactagaaaactatggcaggctg 9723700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 606348 - 606284
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    ||||||| |||||||| ||||||||||||||||||||||||||  | ||||||||| ||||||||    
T  606348 taagtcaccgaaatacccatgtttccggatctgcaacgttgatgtccaaatcattggttgaattt 606284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 344
Target Start/End: Complemental strand, 23128506 - 23128402
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  | |  | ||||| ||||| |||||||||||||||||||||||||||||  |||||||| |||    
T  23128506 tgtagaggggtgattctaggtcaaaaaatgacctaaaactatccctcctcaatgaacgaaggagaaagaaagtttagagagaagttagagtttctcccac 23128407  T
Q  340 tagaa 344  Q
    |||||    
T  23128406 tagaa 23128402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 29320064 - 29320150
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttg 326  Q
    ||||||| | ||||| ||| |||||| || || |||  |||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  29320064 tgtagaggggtgattctagatcaaaatatgacctaaaaccacccatcctcgatgaacgaaggagaaagaaagtttaaagagaagttg 29320150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 29255692 - 29255749
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||| |||||||||||| ||||| ||||||||||| | ||||||||||||||||    
T  29255692 tcgatgaacgaaggagaaagagagtttggagagaagttggaatttctctcactagaaa 29255749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 127815 - 127712
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaac 94  Q
    ||||| ||| ||||||||||||| ||||| ||||||||||||||  || ||||||||||| ||||      |||||||||||| | ||||||||| ||||    
T  127815 tctaaatcaccgaaatactcatgcttccgaatctgcaacgttgacgcccaaatcattgatcgaatttgtaattgactgatgtcgatctttcaataggaac 127716  T
Q  95 taaa 98  Q
    ||||    
T  127715 taaa 127712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4010456 - 4010520
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||||||| ||||||||||||| |||||||||||||||||  |  || ||||||||||||||||    
T  4010456 tctaagtcaccgaaatactcatgcttccggatctgcaacgtcaacacccaaatcattgattgaat 4010520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 4010712 - 4010803
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||| ||||||||||||| |  |||   ||||| ||||| || ||| |||||||||||||  ||||||||||| |||||||||||||||||    
T  4010712 tgattctaggtcaaaaaatgatctaaagtcactcctcctcaataaataaaggagaaagaaaacttagagagaagatgaagtttctctcacta 4010803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 30894744 - 30894635
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg------actgatgtctacctttcaatatgaact 95  Q
    |||| |||||||||||| |||| ||| ||||||| ||||||||  || ||||||||| |||||||||      ||||||||| | |||||||||||||||    
T  30894744 ctaattcatcgaaatac-catgcttctggatctgtaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatatgaact 30894646  T
Q  96 aaacgtacacc 106  Q
    ||||| |||||    
T  30894645 aaacgaacacc 30894635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 7515147 - 7515213
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||| |||| |||| |||||||| |||||||||||  |||||||||||| |||||||||    
T  7515147 ctaagtcaccgacatacacatgcttccggatttgcaacgttgacgcctaaatcattggttgaatttg 7515213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 7515403 - 7515501
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaa-taacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||| | ||||| |||||||||||| |||  |||  |||| | ||||||||||| ||| ||||||| |||||||||||||||||| || |||||||    
T  7515403 tgtagaggggtgattctaggtcaaaaaaataatctaaaaccacccctcctcgatgaacgaaagagaaagcaagtttagagagaagttggagcttctctc 7515501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 34018704 - 34018595
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg------actgatgtctacctttcaatatgaacta 96  Q
    |||||||  |||||||||||| ||||||||||||||||||||  || ||||||||  |||||||||      |||||| || | ||||||||| ||||||    
T  34018704 taagtcactgaaatactcatgcttccggatctgcaacgttgacgcccaaatcattagttgaatttgtaattaactgatctcgatctttcaataggaacta 34018605  T
Q  97 aacgtacacc 106  Q
    |||| |||||    
T  34018604 aacgaacacc 34018595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23128762 - 23128697
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| |||||||||| |||||||||   | |||||||||||||||||||    
T  23128762 taagtcaccgaaatacccatgcttccggatctacaacgttgacatccaaatcattgattgaatttg 23128697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 30608461 - 30608526
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| |||| |||||||||||||||  || ||||||||| |||||||||    
T  30608461 taagtcaccgaaatacccatgattccagatctgcaacgttgacacccaaatcattggttgaatttg 30608526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 35219747 - 35219780
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||||||||||||||||||||||||||||||    
T  35219747 cgaaatactcatgtttccggatctgcaacgttga 35219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 1933649 - 1933700
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    |||| ||||||||||||||||||||||||||   | ||||||||||||||||    
T  1933649 aataatcatgtttccggatctgcaacgttgacgtccaaatcattgattgaat 1933700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8102872 - 8102805
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| |||||  |||| ||||||||| ||||||||||||||||  || |||||||||| ||||||||    
T  8102872 tctaaatcatcagaatattcatgtttctggatctgcaacgttgacgcccaaatcattgaatgaatttg 8102805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20225997 - 20225930
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| ||||||||||||||||| ||| | ||||||||||| |   || |||||||||||||||||||    
T  20225997 tctaactcatcgaaatactcatgcttcagaatctgcaacgtcggcgccaaaatcattgattgaatttg 20225930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22119981 - 22119914
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| ||||||||||||||||| ||| | ||||||||||| |   || |||||||||||||||||||    
T  22119981 tctaactcatcgaaatactcatgcttcagaatctgcaacgtcggcgccaaaatcattgattgaatttg 22119914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 3913519 - 3913585
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||| ||| |||||||| |||| ||| ||||||||||||||||   ||||||||||| |||||||||    
T  3913519 ctaaatcaccgaaatacccatgcttctggatctgcaacgttgacgtctaaatcattgcttgaatttg 3913585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 12170613 - 12170547
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  12170613 ctaaatcaccgaaatacccatgcttccggatctgcaacgttgacatccaaatcattgcttgaatttg 12170547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 546164 - 546111
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    ||||| |||| ||| ||||||||||||||||  || ||||||||||||||||||    
T  546164 aatacccatgcttctggatctgcaacgttgacgcccaaatcattgattgaattt 546111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 11321695 - 11321747
Alignment:
Q  298 aaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctag 350  Q
    ||||||| |||||||||| | |||| ||||||||||||||| |||||| ||||    
T  11321695 aaggagagagaaagtttaaacagaaattgaagtttctctcattagaaaactag 11321747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 14846330 - 14846370
Alignment:
Q  305 aagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  14846330 aagaaagttaagagagaagttggagtttcactcactagaaa 14846370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 358
Target Start/End: Original strand, 48650947 - 48651055
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||||||||||||||||| || |||  |||| | ||||||||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| |||    
T  48650947 tgattttaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttggagtttctttcactagaaaacta 48651046  T
Q  350 gggcgggct 358  Q
    |||||||||    
T  48651047 gggcgggct 48651055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 256 - 358
Target Start/End: Original strand, 36461649 - 36461751
Alignment:
Q  256 taggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgg 355  Q
    ||||||||||||| || |||  |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||| |    
T  36461649 taggtcaaaaaatgacctaaaaccactcatcctcgatgaacgaaggagaaagaaagtttagagagaatatgaagtttctcacactagaaaactagggccg 36461748  T
Q  356 gct 358  Q
    |||    
T  36461749 gct 36461751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 33579755 - 33579650
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| ||||||  |||| | || |||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  33579755 tgtagaggggtgattctaggtcaaaaaatgacttaaaaccacccttcttcgatgaacgaaggataaagaaagtttagagagaagttgaagtttctctcac 33579656  T
Q  340 tagaaa 345  Q
    ||||||    
T  33579655 tagaaa 33579650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 43488848 - 43488917
Alignment:
Q  289 cgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  43488848 cgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactaaaaaactagggccggct 43488917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 45568666 - 45568759
Alignment:
Q  260 tcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||| || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  45568666 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagggc 45568759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 47896038 - 47895925
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| |  ||   |||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  47896038 tgtagaggggtgattctaggtcaaaaaatgatctataaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 47895939  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  47895938 tagaaaactagggc 47895925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 10232957 - 10232845
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | |||| |||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  10232957 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 10232858  T
Q  340 tagaaatctaggg 352  Q
    |||||| ||||||    
T  10232857 tagaaaactaggg 10232845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 21431511 - 21431400
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||||||||||||||| | || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  21431511 tgtagaggggtgattttaggtcaaaaa-tgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 21431413  T
Q  340 tagaaatctaggg 352  Q
    |||||| ||||||    
T  21431412 tagaaaactaggg 21431400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 35865144 - 35865247
Alignment:
Q  248 gatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatc 347  Q
    ||||||||||| ||||||| | || |||  |||| | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35865144 gatgattttagatcaaaaa-tgacctaaaaccacccctcctcgaggaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaaac 35865242  T
Q  348 taggg 352  Q
    |||||    
T  35865243 taggg 35865247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 38545713 - 38545617
Alignment:
Q  249 atgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||| ||||||||||||| || |||  ||||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38545713 atgattctaggtcaaaaaatgacctaaaaccaccactcctcaatgaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 38545617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 40487202 - 40487107
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||| ||||||||||||| || |||   ||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40487202 tgattctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaa 40487107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 9998354 - 9998241
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaa-taacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    ||||||| | ||||| |||||||||||| | || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||    
T  9998354 tgtagaggggtgattctaggtcaaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctccca 9998255  T
Q  339 ctagaaatctaggg 352  Q
    ||||||| ||||||    
T  9998254 ctagaaaactaggg 9998241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 32701385 - 32701272
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| ||||||| ||||||||||||| || |||  |||| |  |||||||||| ||||||||||||||||||| |||||||||| |||||||  |||    
T  32701385 tgtagagggatgattctaggtcaaaaaatgacctaaaaccaccccacctcgatgaacgaaggagaaagaaagtttaaagagaagttggagtttcttccac 32701286  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  32701285 tagaaaactagggc 32701272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 359
Target Start/End: Complemental strand, 40556588 - 40556479
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | ||||||||||| ||| ||||||||||||||||| |||||||| |||||||| ||||||||| |||    
T  40556588 tgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaatgagaaagaaagtttagaaagaagttggagtttctcccactagaaaacta 40556489  T
Q  350 gggcgggctg 359  Q
    |||| |||||    
T  40556488 gggccggctg 40556479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 337
Target Start/End: Original strand, 12050870 - 12050947
Alignment:
Q  260 tcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||||||||||||  |||| |||||| |||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  12050870 tcaaaaaataacttaaaaccacacatccttgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctc 12050947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 6954898 - 6955017
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||   ||| | |||||  |||| |||||||||||||||||||||||||||||| |||||||  |||    
T  6954898 tgtagaggggtgattctaggtcaaaaaatgacctaaaatcacccctcctcagtgaacgaaggagaaagaaagtttagagagaagttggagtttcttccac 6954997  T
Q  340 tagaaatctagggcgggctg 359  Q
    |||||| ||||||| |||||    
T  6954998 tagaaaactagggccggctg 6955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 10108080 - 10108013
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctaggg 352  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  10108080 tcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactaggg 10108013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 10229316 - 10229249
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctaggg 352  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||    
T  10229316 tcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactaggg 10229249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23799854 - 23799921
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||| ||||||||||||||| |||||||||||||||||  || |||||||||||||||||||    
T  23799854 tctaagtcattgaaatactcatgttttcggatctgcaacgttgacgccgaaatcattgattgaatttg 23799921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 355
Target Start/End: Original strand, 47042254 - 47042369
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||| ||||||| || |||  |||| | ||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||    
T  47042254 tgtagaggggtgattataggttaaaaaatgacctaaaaccacccctcctcgatgaacgaaggataaataaagtttagagagaagttggagtttctttcac 47042353  T
Q  340 tagaaatctagggcgg 355  Q
    ||||||  ||||||||    
T  47042354 tagaaaattagggcgg 47042369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 12149984 - 12150102
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||||||||||  |||| | |||||||||||   |   ||||||||||||| |||||||||||||| ||||||||    
T  12149984 tgtagaggggtgattataggtcaaaaaataacttaaaaccacccctcctcgatgaacagatttgaaagaaagtttatagagaagttgaagtgtctctcac 12150083  T
Q  340 tagaaatctagggcgggct 358  Q
    || ||| ||||||| ||||    
T  12150084 taaaaaactagggcaggct 12150102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 353
Target Start/End: Original strand, 23800123 - 23800227
Alignment:
Q  252 attttaggtcaaaaaataacttaactccactca--tcctcgatgaatgaaggagaaagaaagtttagagag-aagttgaagtttctctcactagaaatct 348  Q
    |||||||||||||||||||| |||  |||| |   || ||||||||||||||||||| ||| ||||||||| || |||||||||||||||||||||| ||    
T  23800123 attttaggtcaaaaaataacctaaaaccacccccctcttcgatgaatgaaggagaaaaaaaatttagagagaaatttgaagtttctctcactagaaaact 23800222  T
Q  349 agggc 353  Q
    |||||    
T  23800223 agggc 23800227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 9688481 - 9688537
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  9688481 tcctcgctgaatgaagaagaaagaaaatttagagagaagttgaagtttctctcacta 9688537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 43016697 - 43016630
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctaggg 352  Q
    ||||||||||| ||| |||||||||| ||||||||||||||  |||||||||||||||||| ||||||    
T  43016697 tcctcgatgaacgaaagagaaagaaaatttagagagaagttagagtttctctcactagaaaactaggg 43016630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 54148875 - 54148765
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||  | |||||||||||||||||||||||||| |||||   ||||||||    
T  54148875 tgtagaggggtgattgtaggtcaaaaaatgacctaaaaccacccctcctcgattgacgaaggagaaagaaagtttagagagaaattgaa---tctctcac 54148779  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  54148778 tagaaaactagggc 54148765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 12050593 - 12050659
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||  ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||    
T  12050593 ctaagtccccgaaatactcatgtttccggatctgcaacgttgacacccaaatcattggttgaatttg 12050659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 9797780 - 9797833
Alignment:
Q  291 atgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaa 344  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  9797780 atgaacgaaggagaaataaagtttagagagaagttggagtttctctcactagaa 9797833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 20609099 - 20609176
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttaga 317  Q
    ||||||| | ||||||||||||||||||||||||||   ||| | ||||||| ||||||||||||||||||| |||||    
T  20609099 tgtagagggttgattttaggtcaaaaaataacttaaaatcacccctcctcgacgaatgaaggagaaagaaagcttaga 20609176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 31272054 - 31272114
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||||| |||||| |||||||  |||||||||||||| ||||||||||||||||||    
T  31272054 tcctcgatgaacgaaggaaaaagaaaacttagagagaagttggagtttctctcactagaaa 31272114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 21534048 - 21534111
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||| |||||||||| || |||||||||||||||||||||||||| ||  ||||||||||||||    
T  21534048 ccacccatcctcgattaacgaaggagaaagaaagtttagagagaaattagagtttctctcacta 21534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 344
Target Start/End: Original strand, 26276005 - 26276099
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaa 344  Q
    ||||||||||||||||||| || |||  ||||   ||||| |||||| |||||||||||||||||| |||||| ||  |||||||||||| ||||    
T  26276005 tgattttaggtcaaaaaattacctaaaaccacctctcctcaatgaataaaggagaaagaaagtttacagagaaattagagtttctctcaccagaa 26276099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 46304465 - 46304531
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| |||| |||||||||||||| |||||  |||||||||||| |||||||||    
T  46304465 ctaagtcaccgaaatacccatgcttccggatctgcaatgttgacgcctaaatcattggttgaatttg 46304531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 352
Target Start/End: Original strand, 50194495 - 50194597
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||||||||||||||||| |  |||  |||||| | ||||| || |||| ||||| ||||  |||||||||||||| |||||||||||||| ||| |||    
T  50194495 tgattttaggtcaaaaaatgatctaaaaccactccttctcgacgagtgaaagagaacgaaaacttagagagaagttggagtttctctcactaaaaaacta 50194594  T
Q  350 ggg 352  Q
    |||    
T  50194595 ggg 50194597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 36910902 - 36910975
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||||||| | |  ||||| |||||||| |||||||||| |||||||||||||||||| ||||||| ||||    
T  36910902 tcctcgatgaacggaaaagaaaaaaagtttatagagaagttggagtttctctcactagaaaactagggccggct 36910975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 52923362 - 52923411
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttct 334  Q
    ||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  52923362 tcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttct 52923411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 45425733 - 45425669
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||| ||||||||| ||| |||||||||||||| |||||  || |||||||||||||||||||    
T  45425733 aagtcaccgaaatacttatggttccggatctgcaatgttgaagcccaaatcattgattgaatttg 45425669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19339319 - 19339253
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| |||||||| |||| ||| ||||||||||| ||||  ||||||||||||||||||||||    
T  19339319 tctaagtca-cgaaatacccatgcttctggatctgcaacattgacacctaaatcattgattgaatttg 19339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 20465219 - 20465281
Alignment:
Q  290 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||||||||||||||| || | || |||||||||||||||||||| ||||| |||||||    
T  20465219 gatgaatgaaggagaaagaaatttaaaag-gaagttgaagtttctctcacaagaaaactagggc 20465281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 20988020 - 20988075
Alignment:
Q  303 gaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||| |||||||||||||||||| |||||||||||||| ||| ||||||| ||||    
T  20988020 gaaaggaagtttagagagaagttggagtttctctcactaaaaaactagggccggct 20988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 35175535 - 35175484
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||||||||||| ||||||||||||||||||  | ||||||||||||||||    
T  35175535 aatactcatgttttcggatctgcaacgttgatgtccaaatcattgattgaat 35175484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 21533754 - 21533820
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| |||| ||||||||||||||||||||  || |||| |||| |||||||||    
T  21533754 ctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgcccaaattattggttgaatttg 21533820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 629116 - 629209
Alignment:
Q  248 gatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||||||| ||| || |||  |||| | |||||||||| |||| | ||| ||||  |||||||||||||  ||||||||||||||    
T  629116 gatgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagggaaggaaaacttagagagaagttagagtttctctcacta 629209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 953654 - 953719
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctag 350  Q
    ||||| ||||||||||||||||||||  ||||||||||  || |||||||||||||| ||| ||||    
T  953654 tcctcaatgaatgaaggagaaagaaaacttagagagaatgtggagtttctctcactataaaactag 953719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7448860 - 7448925
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||| |||||||| |||||||||||   | ||||||||| |||||||||    
T  7448860 taagtcaccgaaatactcatgcttccggatatgcaacgttgacgtccaaatcattggttgaatttg 7448925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7457002 - 7457067
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||| |||||||| |||||||||||   | ||||||||| |||||||||    
T  7457002 taagtcaccgaaatactcatgcttccggatatgcaacgttgacgtccaaatcattggttgaatttg 7457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 10233212 - 10233147
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||||||| ||||||||||||||     ||||||||||| |||||||||    
T  10233212 taagtcaccgaaatactcatgtttctggatctgcaacgttatcgtctaaatcattggttgaatttg 10233147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 32701625 - 32701568
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||| |||||||||| |||||||||  || |||||||||||||||||||    
T  32701625 cgaaatacccatgcttccggatctacaacgttgacgcccaaatcattgattgaatttg 32701568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 40556844 - 40556680
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg------actgatgtctacctttcaatatgaacta 96  Q
    ||||||| | |||||| |||| |||||||| | |||||||||   | ||||||||| |||||||||      ||||||||  | ||||||| | |||||     
T  40556844 taagtcaccaaaatacacatgcttccggatttacaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaagaggaactg 40556745  T
Q  97 aacgtacaccacgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    |||  ||||| |||||||||||| ||||||||| || |||||| || || || ||||||||||||    
T  40556744 aacaaacaccgcgaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgac 40556680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 52923063 - 52923128
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  52923063 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 52923128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 45424939 - 45424875
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||| |||| ||| |||| |||||||||||||| |||||  || |||||||||||||||||||    
T  45424939 aagtcaccgaagtacccatgattccggatctgcaatgttgacgcccaaatcattgattgaatttg 45424875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 46220504 - 46220460
Alignment:
Q  301 gagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||    
T  46220504 gagaaagaaagtttagagagaagttatagtttctatcactagaaa 46220460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19619857 - 19619795
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaa 64  Q
    ||||||||| |||||| |||||| ||| |||||| |||||||||  ||||||||||||||||||    
T  19619857 tctaagtcaccgaaattctcatgcttc-ggatctacaacgttgacacctaaatcattgattgaa 19619795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20608843 - 20608906
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaa 64  Q
    ||||| ||| |||||| |||||| ||||||||||||||| ||||| |  |||||||||||||||    
T  20608843 tctaaatcaccgaaattctcatgcttccggatctgcaactttgatgctcaaatcattgattgaa 20608906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 4711624 - 4711582
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgat 45  Q
    ||||||| |||||||| |||| |||||||||||||||||||||    
T  4711624 taagtcaccgaaatacccatgcttccggatctgcaacgttgat 4711582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 26716075 - 26716117
Alignment:
Q  25 ttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  26716075 ttccggatctgcaacgttgacgccaaaatcattgattgaattt 26716117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 29249083 - 29249029
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||| |||||||||||||||  ||| |||||||||  ||||||||||||||    
T  29249083 ctcgatgagtgaaggagaaagaaaaattaaagagaagttagagtttctctcacta 29249029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 43016998 - 43016932
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||| | ||||  |||||||||||||||||||  || ||||||||| |||||||||    
T  43016998 ctaagtcaccgaaatgcacatgcatccggatctgcaacgttgacgcccaaatcattggttgaatttg 43016932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43488535 - 43488577
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||    
T  43488535 ctaaatcaccgaaatactcatgcttccggatctgcaacgttga 43488577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 46220743 - 46220677
Alignment:
Q  66 ttgactgatgtctacctttcaatatgaactaaacgtacaccacgaaatcaaacgtcgcacaagatga 132  Q
    |||||||||||  |  |||||||| |||||||||| ||||| ||||||||||| || ||||||||||    
T  46220743 ttgactgatgttgatatttcaataggaactaaacgaacaccgcgaaatcaaacatcacacaagatga 46220677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 51303600 - 51303654
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| |||| ||| ||||||||||||||||  || |||||||||||||||||||    
T  51303600 aatacccatgcttctggatctgcaacgttgacgcccaaatcattgattgaatttg 51303654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 6954763 - 6954816
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    |||||||||||| ||||||||| || ||||||||| || || ||||||||||||    
T  6954763 cgaaatcaaacgccgcacaagacgacgaacaatacaacgccgcacttagacgac 6954816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 21431755 - 21431714
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||| |||||||| |||| ||||||||||||||||||||    
T  21431755 taagtcaccgaaatacccatgcttccggatctgcaacgttga 21431714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 26275765 - 26275830
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||  ||||||||||||||| || |||||||||||| |   | |||||||||||||||||||    
T  26275765 taagtcactgaaatactcatgttttcgaatctgcaacgttaacaacaaaatcattgattgaatttg 26275830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 351
Target Start/End: Original strand, 7449155 - 7449214
Alignment:
Q  291 atgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagg 351  Q
    ||||| ||| |||||| ||||||| ||||||||||| ||||||||||| |||||| |||||    
T  7449155 atgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactagg 7449214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 351
Target Start/End: Original strand, 7457297 - 7457356
Alignment:
Q  291 atgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagg 351  Q
    ||||| ||| |||||| ||||||| ||||||||||| ||||||||||| |||||| |||||    
T  7457297 atgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactagg 7457356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 38142448 - 38142357
Alignment:
Q  250 tgattttaggtcaaaaaat-aacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||||||||| |||| || || |||||| || |||||||||| ||||||||||  ||| | ||||  || ||||||||||||||    
T  38142448 tgattttaggtcaaaaaatgaactaaaatc-actcattcttgatgaatgaaagagaaagaaaacttaaaaagaatgtggagtttctctcacta 38142357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 53808109 - 53808165
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||  ||| ||||| ||||  |||||||||||||| ||||||||||||||    
T  53808109 tcctcgatgagcgaaagagaaggaaaacttagagagaagttggagtttctctcacta 53808165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 9e-28; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 26091125 - 26091216
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||| |||||||||||||||| |||   ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  26091125 tgattctaggtcaaaaaataacctaaaatcactcatcctcgatgaatgaaggagaaagaaggtttagagagaagttggagtttctctcacta 26091216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 2520684 - 2520579
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  2520684 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 2520585  T
Q  340 tagaaa 345  Q
    ||||||    
T  2520584 tagaaa 2520579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 341
Target Start/End: Complemental strand, 54021768 - 54021667
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| |||||||||| |||||||||| || |||  ||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  54021768 tgtagagggatgattttatgtcaaaaaatgacctaaaaccactctccctcgatgaatgaagaagaaagaaagtttagagagaaattgaagtttctctcac 54021669  T
Q  340 ta 341  Q
    ||    
T  54021668 ta 54021667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 21686443 - 21686553
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | |||||||||||||||||| | || ||  |||| | |||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  21686443 tgtagaggggtgattttaggtcaaaaaagacctcaaa-ccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttaaagtttctctcac 21686541  T
Q  340 tagaaatctagg 351  Q
    |||||| |||||    
T  21686542 tagaaaactagg 21686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 53810935 - 53810817
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||    
T  53810935 tgtagaggggtgattataggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaggaagaaagtttagagagaagctggagtttctcccac 53810836  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  53810835 tagaaaactagggctggct 53810817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 19853714 - 19853826
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||| | || |||  |||| | ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||    
T  19853714 tgtagaggggtgattctaggtcaaaaa-tgacctaaaaccacccctcctcgatgaatgaaggggaaagaaagtttagagagaagttggagtttctcccac 19853812  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  19853813 tagaaaactagggc 19853826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 13633976 - 13633908
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  13633976 tcctcgatgagcgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagggc 13633908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 352
Target Start/End: Complemental strand, 9178254 - 9178152
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | |||| ||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||| |||    
T  9178254 tgattctaggtcaaaaaatgacctaagaccacccctccttgatgaatgaaggagaaagaaattttagagagaaactgaagtttctctcaccagaaaacta 9178155  T
Q  350 ggg 352  Q
    |||    
T  9178154 ggg 9178152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 351
Target Start/End: Original strand, 26633882 - 26633983
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | ||||| ||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||| |||    
T  26633882 tgattctaggtcaaaaaatgacctaagaccacccctcctcaatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaaacta 26633981  T
Q  350 gg 351  Q
    ||    
T  26633982 gg 26633983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 4142956 - 4143068
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | |||||||||||  |||||||||||||||||| |||||||||| |||||||| |||    
T  4142956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttatagagaagttggagtttctcccac 4143055  T
Q  340 tagaaatctaggg 352  Q
    || ||| ||||||    
T  4143056 taaaaaactaggg 4143068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 10496239 - 10496144
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||| ||||||||||| | || |||  |||| | ||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  10496239 tgattctaggtcaaaaattgacctaaaaccacacctcctcgatgaacgaaggagtaagaaagtttagaaagaagttggagtttctctcactagaaa 10496144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 22300742 - 22300639
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||||||||||||||||| || |||  |||||| ||||||| || |||| |||||| ||| ||||||||||||||| |||||||||| ||| ||| |||    
T  22300742 tgattttaggtcaaaaaatgacctaaaaccactcctcctcgacgagtgaaagagaaataaaatttagagagaagttggagtttctctctctaaaaaacta 22300643  T
Q  350 gggc 353  Q
    ||||    
T  22300642 gggc 22300639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 45418433 - 45418323
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| ||||||| ||||||||||||| || |||  ||||||   ||||||||||| |||||||| ||  ||||||||||||||||||||| |||| |    
T  45418433 tgtagagggatgattctaggtcaaaaaatgacctaaaaccactc---ctcgatgaatggaggagaaaaaatttttagagagaagttgaagtttttctcgc 45418337  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  45418336 tagaaaactagggc 45418323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 352
Target Start/End: Original strand, 48257661 - 48257763
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | ||||||||| | ||| ||||||||||||||| |||||||||| ||||| |||||||||||| |||    
T  48257661 tgattctaggtcaaaaaatgacataaaaccacccctcctcgatgtacgaatgagaaagaaagtttaaagagaagttggagtttttctcactagaaaacta 48257760  T
Q  350 ggg 352  Q
    |||    
T  48257761 ggg 48257763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 349
Target Start/End: Original strand, 22558667 - 22558776
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| || |||||||||| || |||  |||| | ||||| ||||| |||||||||||||||||||||||||| ||| |||||||||| |    
T  22558667 tgtagagaggtgattctatgtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaaattggagtttctctctc 22558766  T
Q  340 tagaaatcta 349  Q
    || |||||||    
T  22558767 taaaaatcta 22558776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 22611046 - 22610973
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||| ||||    
T  22611046 tcctcgacgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactaaaaaactagggccggct 22610973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 5119200 - 5119132
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    |||| ||||||||||||||||| |||||||||| |||||||||| ||| |||||||||||| |||||||    
T  5119200 tccttgatgaatgaaggagaaataaagtttagaaagaagttgaaatttatctcactagaaaactagggc 5119132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 9165290 - 9165350
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||    
T  9165290 tcctcgatgaatgatggaaaaagaaagtttagagagaagttggagtttctctcacaagaaa 9165350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 33920921 - 33920858
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||| ||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  33920921 ccacccattctcgatgaatgaagaagaaagaaagtttagggaaaagttgaagtttctctcacta 33920858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 24099272 - 24099386
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaa-taacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    ||||||| ||||||| |||||||||||| | || |||  ||||   ||||||||||| | || ||||||||||||||||||||| || |||||||| |||    
T  24099272 tgtagagggatgattctaggtcaaaaaaatgacctaaaaccacctctcctcgatgaacgtagaagaaagaaagtttagagagaatttaaagtttctttca 24099371  T
Q  339 ctagaaatctagggc 353  Q
    ||||||| |||||||    
T  24099372 ctagaaaactagggc 24099386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 43510096 - 43510010
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctct 336  Q
    ||||| ||||||||||||| || |||  |||| | || |||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  43510096 tgattctaggtcaaaaaatgacctaaaaccacccttcttcgatgaacgaaggagaatgaaagtttaaagagaagttgaagtttctct 43510010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 51024712 - 51024781
Alignment:
Q  289 cgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||||  |||||| ||||    
T  51024712 cgatgaacgaaggagaaagaaagtatagagagaagttggagtttctctcactggaaaattagggccggct 51024781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 35348213 - 35348101
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||   ||| | ||| ||||||  |||||||||| |||||||| |||||||||| ||||||| ||||    
T  35348213 tgtagagaggtgattctaggtcaaaaaatgacctaaaatcacccctccacgatgagcgaaggagaaaaaaagtttaaagagaagttggagtttctttcac 35348114  T
Q  340 tagaaatctaggg 352  Q
    |||||| ||||||    
T  35348113 tagaaaactaggg 35348101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45418677 - 45418610
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| |||||||||  || || |||||||||||||||||| || |||||||||||||||||||    
T  45418677 tctaagtcaccgaaatactagtgctttcggatctgcaacgttgatgcccaaatcattgattgaatttg 45418610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 4142698 - 4142763
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||||||| ||||||||||||||||   | ||||||||| |||||||||    
T  4142698 taagtcaccgaaatactcatgtttctggatctgcaacgttgacgtccaaatcattggttgaatttg 4142763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 22611346 - 22611281
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  22611346 taagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 22611281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 29961179 - 29961236
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||  ||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  29961179 tcgatgaacaaaggaaaaagaaagtttagagagaagttggagtttctctcattagaaa 29961236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 32766677 - 32766612
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||||||||||||||||||| ||||   | |||||||||||||||||||    
T  32766677 taagtcaccgaaatacccatgtttccggatctgcaacattgacgtccaaatcattgattgaatttg 32766612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 53811191 - 53811126
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  53811191 taagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 53811126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 56156793 - 56156866
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagg 351  Q
    |||| |||||| |||||| |||  ||||||||||||||||||||||||| ||||||||||| || ||| |||||    
T  56156793 ccacccatccttgatgaacgaataagaaagaaagtttagagagaagttggagtttctctcaataaaaaactagg 56156866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 53443988 - 53443932
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||| ||||| ||| |||||| ||||||||||||||||||||||||| ||||||||    
T  53443988 tcctcaatgaacgaaagagaaaaaaagtttagagagaagttgaagtttatctcacta 53443932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 54022025 - 54021914
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaac 94  Q
    ||||||||| |||||||  ||||||| |||||||||||||||||   | |||||||||||| |||      |||||||||||| | ||||||||| ||||    
T  54022025 tctaagtcaccgaaatatccatgttttcggatctgcaacgttgacatccaaatcattgattcaatttgtaattgactgatgtcgatctttcaataggaac 54021926  T
Q  95 taaacgtacacc 106  Q
    |||||| |||||    
T  54021925 taaacgaacacc 54021914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 21662601 - 21662535
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| |||| ||||||||||||||||||||  |  ||||||||||||| |||||    
T  21662601 ctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattggatttg 21662535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 21671365 - 21671299
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| |||| ||||||||||||||||||||  |  ||||||||||||| |||||    
T  21671365 ctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattggatttg 21671299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 24099012 - 24099078
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||  ||||||| |||||||||||||||||||||||||   | ||||||||| |||||||||    
T  24099012 ctaagtcactgaaatacccatgtttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 24099078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 27652096 - 27652042
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| |||| ||| ||||||||||||||||| || |||||||||||||||||||    
T  27652096 aatacccatgcttctggatctgcaacgttgatacccaaatcattgattgaatttg 27652042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 353
Target Start/End: Original strand, 51888437 - 51888531
Alignment:
Q  259 gtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    |||||||||| || |||  |||| | |||||||||| |||| ||||||||||   |||||| |||||||||||||||||| || ||| |||||||    
T  51888437 gtcaaaaaatgacctaaaaccacccctcctcgatgagtgaaagagaaagaaaacgtagagaaaagttgaagtttctctcaataaaaaactagggc 51888531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 21686198 - 21686253
Alignment:
Q  13 aaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  21686198 aaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 21686253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33921219 - 33921152
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||  ||||||| |||| ||||||||||||||||||||  |  |||| ||||||||||||||    
T  33921219 tctaagtcactgaaatacccatgcttccggatctgcaacgttgacgctcaaattattgattgaatttg 33921152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 38166187 - 38166238
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||||||||| ||||||||||||||||||||  | ||||||||| ||||||    
T  38166187 aatactcatgtctccggatctgcaacgttgatgtccaaatcattgcttgaat 38166238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 52978672 - 52978621
Alignment:
Q  294 aatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||| | ||| ||||||||||||||| ||||||||| ||||||||||||    
T  52978672 aatgaagaaaaaaaaaagtttagagagaaattgaagtttatctcactagaaa 52978621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 6082267 - 6082297
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||||||||||||||||||||    
T  6082267 aatactcatgtttccggatctgcaacgttga 6082297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 20887594 - 20887624
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||||||||||||||||||||    
T  20887594 aatactcatgtttccggatctgcaacgttga 20887624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 29960913 - 29960959
Alignment:
Q  21 atgtttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||||    
T  29960913 atgtttccggatctgcaacgttgatgccaaaatcatcggttgaattt 29960959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 36124185 - 36124215
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||||||||||||||||||||    
T  36124185 aatactcatgtttccggatctgcaacgttga 36124215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 36700439 - 36700377
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    |||||||||||||||| || | |||| ||| |||||||||||  || ||||||||||||||||    
T  36700439 taagtcatcgaaatacccacgcttccagatttgcaacgttgacgcccaaatcattgattgaat 36700377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 56040591 - 56040657
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| |||| ||| |||||||||||||||   || ||||||||| |||||||||    
T  56040591 ctaagtcaccgaaatacccatgcttctggatctgcaacgttgccgcccaaatcattggttgaatttg 56040657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 11300058 - 11300111
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    ||||||||||||| |||||||| || |||||| || ||||| ||||||||||||    
T  11300058 cgaaatcaaacgttgcacaagacgacgaacaacacaacaccgcacttagacgac 11300111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 19853458 - 19853523
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||  |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  19853458 taagtcaccgaaatatccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 19853523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 29121890 - 29121954
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagttta 315  Q
    ||||||||||||||||||| || |||  ||| |||||||||||||| |||||||||| ||| ||||    
T  29121890 tgattttaggtcaaaaaatgacctaaaacca-tcatcctcgatgaacgaaggagaaataaaattta 29121954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 32766556 - 32766503
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    |||||||||||| ||||||||| || |||||| || ||||| ||||||||||||    
T  32766556 cgaaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacgac 32766503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 43244215 - 43244248
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||| |||||||||||||||||||    
T  43244215 cgaaatactcatgtctccggatctgcaacgttga 43244248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 9713763 - 9713695
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    |||||||||| |||| |||||||| |  ||||||||||| |  |||||||||||||| ||| |||||||    
T  9713763 tcctcgatgagtgaaagagaaagagaacttagagagaaggtagagtttctctcactaaaaaactagggc 9713695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 13634269 - 13634237
Alignment:
Q  12 gaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||| |||||||||||||||||||||||||    
T  13634269 gaaatacccatgtttccggatctgcaacgttga 13634237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 42978497 - 42978392
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||||| ||||| ||||||||||||| || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  42978497 tgtagagtggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcac 42978398  T
Q  340 tagaaa 345  Q
    ||||||    
T  42978397 tagaaa 42978392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 8013667 - 8013780
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| |  |||  |||| | |||||||||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  8013667 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgatgaacaaagaagaaagaaagtttagagagaagttgaagtttctctcac 8013766  T
Q  340 tagaaatctagggc 353  Q
    || ||| |||||||    
T  8013767 taaaaaactagggc 8013780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 13797133 - 13797244
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||| ||||||| || |||  |||  ||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||    
T  13797133 tgtagaggggtgattctaggttaaaaaatgacctaaaaccatccatcctcgatgaacgaacgagaaagaaaatttaaagagaagttgaagtttctctcac 13797232  T
Q  340 tagaaatctagg 351  Q
    |||||| |||||    
T  13797233 tagaaaactagg 13797244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 30757021 - 30757132
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||    
T  30757021 tgtagaggggtgattctaggtcaaaaaattacctaaaaccacccctcctcgatgaacgaaagagaaagaaaatttagagagaagttgaagtttctcccac 30757120  T
Q  340 tagaaatctagg 351  Q
    || ||| |||||    
T  30757121 taaaaaactagg 30757132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 37837660 - 37837765
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||     
T  37837660 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaataaagtttagagagaagttggagtttctctcat 37837759  T
Q  340 tagaaa 345  Q
    ||||||    
T  37837760 tagaaa 37837765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 45350439 - 45350499
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45350439 tcctctatgaacgaaggagaaaaaaagtttagagagaagttgaagtttctctcactagaaa 45350499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 345
Target Start/End: Original strand, 9450349 - 9450444
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||| ||||||||||||| || |||  |||  | ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  9450349 tgattctaggtcaaaaaatgacctaaaaccatccctcctcgatgaacgaaggagaaagaaagtttaaaaagaagttggagtttctctcactagaaa 9450444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 40993060 - 40992958
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||||||||||||||||| || |||  | || ||||||||||||| |||| ||||  ||||||||||||||||||| |||||||| ||||||||| |||    
T  40993060 tgattttaggtcaaaaaatgacctaaaactac-catcctcgatgaacgaagaagaactaaagtttagagagaagttggagtttctcccactagaaaacta 40992962  T
Q  350 gggc 353  Q
    ||||    
T  40992961 gggc 40992958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 12141510 - 12141607
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||| | ||||| || |||||||||| || |||  |||| | || |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  12141510 tgtagaggggtgattctatgtcaaaaaatgacctaaaaccacccctcttcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 12141607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 39171794 - 39171907
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || ||   |||| | ||||||||||| |||| |||||||||||||||||| | |||| ||||| ||||||    
T  39171794 tgtagaggggtgattctaggtcaaaaaatgacctacaaccacccctcctcgatgaacgaagaagaaagaaagtttagagatacgttggagtttatctcac 39171893  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  39171894 tagaaaactagggc 39171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 46700182 - 46700067
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaac 94  Q
    ||||||||| |||||||  |||| |||||||||||||||| |||| || ||||||||||||||||      |||||||||||| |  |||||||| ||||    
T  46700182 tctaagtcaccgaaatatccatgcttccggatctgcaacgctgatgcccaaatcattgattgaatttgtagttgactgatgtcgatatttcaataggaac 46700083  T
Q  95 taaacgtacaccacga 110  Q
    |||||| |||||||||    
T  46700082 taaacgaacaccacga 46700067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 4529918 - 4529855
Alignment:
Q  290 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||||||||||||||   ||||||||||| ||||||||||||||||||||| |||||||    
T  4529918 gatgaatgaaggagaaagaagacttagagagaaggtgaagtttctctcactagaaaactagggc 4529855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 34899809 - 34899907
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||||||||   | |||| |||||||||||||||||||||||||||||| |||||||| |||    
T  34899809 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactcatc---ggtgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 34899905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 19404956 - 19405057
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | | ||| |||||| ||||||||||||  ||||||||||||||| ||||||||||||    
T  19404956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccttctcaatgaattaaggagaaagaagatttagagagaagttggagtttctctcac 19405055  T
Q  340 ta 341  Q
    ||    
T  19405056 ta 19405057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 358
Target Start/End: Original strand, 39329033 - 39329113
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    |||||| |||||||||||  |||||||||||||||||||| | |||||  ||||||||||||||||||  |||||| ||||    
T  39329033 ccactcctcctcgatgaacaaaggagaaagaaagtttagaaaaaagtttgagtttctctcactagaaaattagggccggct 39329113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 48061266 - 48061214
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  48061266 tcctcgatgaacgaaggataaagaaagtttagagagaagttggagtttctctc 48061214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19404701 - 19404768
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||  |||||||||||| ||||||||||||||| ||||  || |||||||||||||||||||    
T  19404701 tctaagtcactgaaatactcatgcttccggatctgcaacattgacgcccaaatcattgattgaatttg 19404768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 37837403 - 37837513
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaact 95  Q
    |||||||| |||||| | |||| ||||||||||||||||||||  || ||||||||| ||||||      |||||||||||| | ||||||||| |||||    
T  37837403 ctaagtcaccgaaattcacatgcttccggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaataggaact 37837502  T
Q  96 aaacgtacacc 106  Q
    ||||| |||||    
T  37837503 aaacgaacacc 37837513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 42978756 - 42978646
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaact 95  Q
    |||||||| |||||||| |||  ||||||||||||||||||||  || ||||||||| ||||||      |||||||||||| | ||||||||| |||||    
T  42978756 ctaagtcaccgaaatacccatccttccggatctgcaacgttgacgcccaaatcattggttgaatttgttattgactgatgtcgatctttcaataagaact 42978657  T
Q  96 aaacgtacacc 106  Q
    ||||| |||||    
T  42978656 aaacgaacacc 42978646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 30756765 - 30756830
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||||||||| |||||||||||||||||||||  | |||| |||| |||||||||    
T  30756765 taagtcaccgaaatactcatgcttccggatctgcaacgttgatgtccaaattattggttgaatttg 30756830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 19296767 - 19296655
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| |||||| ||| |||  |||||| ||||||| |||||||| |||    
T  19296767 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggacaaaaaaaaattagagggaagttggagtttctcccac 19296668  T
Q  340 tagaaatctaggg 352  Q
    || ||| ||||||    
T  19296667 taaaaaactaggg 19296655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12141252 - 12141319
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  12141252 tctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 12141319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 8001491 - 8001557
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||   | ||||||||| |||||||||    
T  8001491 ctaagtcaccgaaatactcatgattccgaatctgcaacgttgacgtccaaatcattgcttgaatttg 8001557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 13796875 - 13796984
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaacta 96  Q
    ||||||| | ||||||||||| ||||||||||||||||||||     ||||||||| |||| |      |||||||||||| | ||||||||||||||||    
T  13796875 taagtcacctaaatactcatgcttccggatctgcaacgttgacggtcaaatcattggttgactttgttattgactgatgtcgatctttcaatatgaacta 13796974  T
Q  97 aacgtacacc 106  Q
    |||| |||||    
T  13796975 aacgaacacc 13796984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 341
Target Start/End: Original strand, 25287402 - 25287484
Alignment:
Q  259 gtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||| ||||||||||  ||||   || |||| |||||||||||||||||| |||| |||||||||  ||||||||||||||    
T  25287402 gtcaaataataacttaaaaccacctctcttcgacgaatgaaggagaaagaaaatttatagagaagttatagtttctctcacta 25287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 38798633 - 38798562
Alignment:
Q  286 cctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggctg 359  Q
    |||||||||| ||| ||||||||||||| ||| |||||||| ||||  |||||||||||| ||||||| |||||    
T  38798633 cctcgatgaacgaatgagaaagaaagttcagacagaagttggagtt--tctcactagaaaactagggccggctg 38798562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 39171535 - 39171601
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  39171535 ctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 39171601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 47590457 - 47590391
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||  ||||||||||||| |||||||| |||||||||||  || ||||||||| |||||||||    
T  47590457 ctaagtcgccgaaatactcatgcttccggatgtgcaacgttgacgcccaaatcattggttgaatttg 47590391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 48317014 - 48317119
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| |||||| |||||| || |||  |||| | |||| |||||| ||||||||||| || ||||||||||||||  ||||||| ||||    
T  48317014 tgtagaggggtgattctaggtccaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagcaaatttagagagaagttagagtttctttcac 48317113  T
Q  340 tagaaa 345  Q
    | ||||    
T  48317114 tcgaaa 48317119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 25067958 - 25067862
Alignment:
Q  257 aggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||| || || |||  |||||||| |||||| |||||| || |||||||  |||| |||||| || |||||||||||||| ||| |||||||    
T  25067958 aggtcaaaagatgacataaaaccactcattctcgataaatgaaagaaaaagaaaacttagtgagaaggtggagtttctctcactaaaaaactagggc 25067862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 47590158 - 47590102
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||| ||||| ||| |||||||||| ||||||||||||||| | ||||||||||||    
T  47590158 tcctctatgaacgaatgagaaagaaaatttagagagaagttggaatttctctcacta 47590102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 9915988 - 9915941
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagttt 332  Q
    |||||||| || |||||||||||||||||| ||||||||||| |||||    
T  9915988 tcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9915941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 9923900 - 9923853
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagttt 332  Q
    |||||||| || |||||||||||||||||| ||||||||||| |||||    
T  9923900 tcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 24770097 - 24770058
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttg 326  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  24770097 ctcgatgaacgaatgagaaagaaagtttagagagaagttg 24770058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 24770272 - 24770217
Alignment:
Q  106 cacgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    ||||||||||||||||||| |||| || |||||| || ||||| ||||||||||||    
T  24770272 cacgaaatcaaacgtcgcataagacgacgaacaacacaacaccgcacttagacgac 24770217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 5348830 - 5348896
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagg 351  Q
    |||||||||||| |||||||||||||  ||| | ||||| |||||||||| |||||| ||| |||||    
T  5348830 tcctcgatgaataaaggagaaagaaaacttaaaaagaagatgaagtttctttcactaaaaaactagg 5348896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 9785601 - 9785571
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||||||||||||||||||||    
T  9785601 aatactcatgtttccggatctgcaacgttga 9785571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 22743078 - 22743024
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||| ||| ||||||||||||||||  |  |||||||||||||||||||    
T  22743078 aatactcatgcttctggatctgcaacgttgacgctcaaatcattgattgaatttg 22743024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 24350796 - 24350850
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| |||| ||| ||||||||||||||||  || |||||||||||||||||||    
T  24350796 aatacccatgcttctggatctgcaacgttgacgcccaaatcattgattgaatttg 24350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 28044701 - 28044743
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||| ||| |||||||| |||||||||||||||||||||||||    
T  28044701 ctaaatcaccgaaatacccatgtttccggatctgcaacgttga 28044743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 35133081 - 35133027
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||| ||  ||||||||||||||||  || |||||||||||||||||||    
T  35133081 aatactcatgcttttggatctgcaacgttgacgcccaaatcattgattgaatttg 35133027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 19297007 - 19296950
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  19297007 cgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 19296950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 341
Target Start/End: Original strand, 5078668 - 5078696
Alignment:
Q  313 ttagagagaagttgaagtttctctcacta 341  Q
    |||||||||||||||||||||||||||||    
T  5078668 ttagagagaagttgaagtttctctcacta 5078696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 7646369 - 7646256
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  7646369 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 7646270  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  7646269 tagaaaactagggc 7646256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 35220215 - 35220108
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| |||||||||||||||| |||  ||||    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||    
T  35220215 tgattctaggtcaaaaaataacctaaaaccac---ccctcgatgaatgaaggagaaagaaagtttagagagaggttggagtttctctcactagaaaacta 35220119  T
Q  350 gggcgggctgt 360  Q
    |||| ||||||    
T  35220118 gggccggctgt 35220108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 36943326 - 36943439
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||||| ||||| ||||||||||||| || |||  |||| | |||||||| || ||||||||||||||||||||||| || ||| ||||||||||||    
T  36943326 tgtagagtggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatcaacgaaggagaaagaaagtttagagataaattggagtttctctcac 36943425  T
Q  340 tagaaatctagggc 353  Q
    |||||| |||||||    
T  36943426 tagaaaactagggc 36943439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 4778650 - 4778532
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| ||||||||||||||||||||| |||||||| |||||||| |||    
T  4778650 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 4778551  T
Q  340 tagaaatctagggcgggct 358  Q
    || ||| ||||||| ||||    
T  4778550 taaaaaactagggccggct 4778532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 7448145 - 7448027
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| |||| |||||||| || |||  |||| | ||||||||||| |||||| ||||||||||||||||||||||| |||||||| |||    
T  7448145 tgtagaggggtgattctaggacaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaaaaagaaagtttagagagaagttggagtttctcccac 7448046  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  7448045 tagaaaactagggctggct 7448027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 12677498 - 12677616
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || | |  | || | |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  12677498 tgtagaggggtgattctaggtcaaaaaatgaccttaaactacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcac 12677597  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  12677598 tagaaaactagggccggct 12677616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 11985432 - 11985544
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||| ||||||| ||||||  ||||   ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||     
T  11985432 tgtagaggggtgattctaggttaaaaaatgacttaaaaccaccactcctcgaagaatgaaagagaaagaaagtttagagagaagttggagtttctctcat 11985531  T
Q  340 tagaaatctaggg 352  Q
    |||||| ||||||    
T  11985532 tagaaaactaggg 11985544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 358
Target Start/End: Original strand, 27097617 - 27097725
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||   ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||||| |||    
T  27097617 tgattctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcttccactagaaaacta 27097716  T
Q  350 gggcgggct 358  Q
    |||| ||||    
T  27097717 gggccggct 27097725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 4098990 - 4098887
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | ||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||| ||| |||    
T  4098990 tgattctaggtcaaaaaatgacctaaagccacccttcctcgatgaaggaaagagaaagaaagtttagagagaagttggagtttctcccactaaaaaacta 4098891  T
Q  350 gggc 353  Q
    ||||    
T  4098890 gggc 4098887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 43397321 - 43397439
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | | ||||||||| |||| | |||||||||||| |||||||||| ||||||||||||    
T  43397321 tgtagagaggtgattctaggtcaaaaaatgacctaaaaccaccccttctcgatgaacgaagaaaaaagaaagtttaaagagaagttggagtttctctcac 43397420  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  43397421 tagaaaactagggccggct 43397439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 7678080 - 7678181
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | || ||||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  7678080 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcatcgatcaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 7678179  T
Q  340 ta 341  Q
    ||    
T  7678180 ta 7678181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 31788353 - 31788248
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  || |   ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  31788353 tgtagaggggtgattctaggtcaaaaaattacctaaaaccgcctctcctcgatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcac 31788254  T
Q  340 tagaaa 345  Q
    ||||||    
T  31788253 tagaaa 31788248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 1421523 - 1421463
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  1421523 tcctcgatgaacgaaggagaaagaaagtttagcgagaagttggagtttctctcactagaaa 1421463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 18763365 - 18763265
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  ||||   ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  18763365 tgtagaggggtgattctaggtcaaaaaatgacataaaaccacctctcctcgatggatgaaggtgaaagaaagtttagagagaagttggagtttctctcac 18763266  T
Q  340 t 340  Q
    |    
T  18763265 t 18763265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 42698919 - 42698978
Alignment:
Q  282 tcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  42698919 tcatcctcaatgaataaaggagaaagaaagtttagaaagaagttgaagtttctctcacta 42698978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 5428086 - 5428167
Alignment:
Q  256 taggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||||||| |||| |||  |||| | ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  5428086 taggtcaaaaattaacctaaaaccacccctcctcgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctc 5428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 31128727 - 31128792
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||  |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  31128727 taagtcactgaaatactcatgcttccggatctgcaacgttgacgcctaaatcattgattgaatttg 31128792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 29279814 - 29279877
Alignment:
Q  281 ctcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  29279814 ctcatcctcgatgaatgaag-agaaagaaaggttagagagaagttggagtttctctcacaagaaa 29279877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 31128995 - 31129051
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| ||||||||    
T  31128995 tcctcgatcaacgaaggagaaagaaagtttagagagaagttgaagtttttctcacta 31129051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25509013 - 25509080
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||||||||||| ||||||||||||| |||||||||||  || | |||||||||||||||||    
T  25509013 tctaagtcatcgaaatacccatgtttccggatttgcaacgttgacgcccagatcattgattgaatttg 25509080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 9169460 - 9169564
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||| | || |||  |||| | |||||||| || ||| |||||||||||||||||||||||||| |||||||| |||    
T  9169460 tgtagaggggtgattctaggtcaaaaa-tgacctaaaaccacccctcctcgataaacgaatgagaaagaaagtttagagagaagttggagtttctcccac 9169558  T
Q  340 tagaaa 345  Q
    ||||||    
T  9169559 tagaaa 9169564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 4904338 - 4904439
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    |||| |||| ||||| ||||||||||||| || |||  ||||   || || || || ||| |||||||||||||||||||||||||||||||||||| ||    
T  4904338 tgtaaagtggtgattataggtcaaaaaatgacataaaaccaccactcttcaataaacgaatgagaaagaaagtttagagagaagttgaagtttctcttac 4904437  T
Q  340 ta 341  Q
    ||    
T  4904438 ta 4904439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 29279517 - 29279582
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||  |  |||||||||||||||||||    
T  29279517 taagtcaccgaaaaactcatgtttccggatctgcaacattgacgcacaaatcattgattgaatttg 29279582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 15920162 - 15920122
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  15920162 aagtcttcgaaatactcatgtttccggatctgcaacgttga 15920122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 17994677 - 17994778
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttgactgatgtctacctttcaatatgaactaaacgta 102  Q
    ||||||| ||||||||  ||| |||||||| |||||||||||   | |||||||||||||||||||  ||||||| | |||||||||  ||||||||| |    
T  17994677 taagtcaccgaaatacctatggttccggatgtgcaacgttgacgtccaaatcattgattgaatttg--tgatgtcgatctttcaatagaaactaaacgaa 17994774  T
Q  103 cacc 106  Q
    ||||    
T  17994775 cacc 17994778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 36943069 - 36943133
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||| |||||||| |||||||||||||||||||||||||  || ||||||||| | |||||||    
T  36943069 aagtcaccgaaatacccatgtttccggatctgcaacgttgacgcccaaatcattggtggaatttg 36943133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 37876810 - 37876886
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttg 326  Q
    ||||| ||||||||||| | || |||  |||| | ||||||||||| |||| |||||||||||||||||||||||||    
T  37876810 tgattctaggtcaaaaattgacctaaaaccacccctcctcgatgaacgaagaagaaagaaagtttagagagaagttg 37876886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 17150017 - 17149966
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    |||||||||||||||||||| |||  ||||||||||| ||||||||||||||    
T  17150017 ctcgatgaatgaaggagaaataaaacttagagagaaggtgaagtttctctca 17149966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29173665 - 29173732
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| |||||||| |||| || |||||||||||||||||  || |||| ||||||||||||||    
T  29173665 tctaagtcaccgaaatacccatgctttcggatctgcaacgttgacacccaaataattgattgaatttg 29173732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 30399992 - 30400047
Alignment:
Q  13 aaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||||| || |||||||||||||||||  || |||||||||||||||||||    
T  30399992 aaatactcatgctttcggatctgcaacgttgacgcccaaatcattgattgaatttg 30400047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 8809134 - 8809084
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctc 335  Q
    ||||||| | |||||||||||||||||||||||||||||||  ||||||||    
T  8809134 tcctcgacgtatgaaggagaaagaaagtttagagagaagttagagtttctc 8809084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 13120057 - 13119995
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctag 350  Q
    ||||||||||||| ||||||| |||||| |||||||   ||||||||||||||||||| ||||    
T  13120057 tcgatgaatgaagaagaaagagagtttatagagaaggcaaagtttctctcactagaaaactag 13119995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 41694465 - 41694411
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||| ||||||||| |||||| ||||||||||| |||||||||||| ||||    
T  41694465 ctcgatgagtgaaggagagagaaagcttagagagaaggtgaagtttctcttacta 41694411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 4778906 - 4778841
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  4778906 taagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 4778841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 7646631 - 7646590
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  7646631 taagtcaccgaaatactcatgcttccggatctgcaacgttga 7646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 17994979 - 17995036
Alignment:
Q  301 gagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||||||||||||||||||| |||||||||| ||| |  ||| ||||||||||||    
T  17994979 gagaaagaaagtttagagagaagatgaagtttctgtcattgaaaaactagggcgggct 17995036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 37876553 - 37876618
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| || |||||||||||||||||| || || |||||| |||||||||    
T  37876553 taagtcaccgaaatacccatgctttcggatctgcaacgttgatgcccaagtcattggttgaatttg 37876618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 40039145 - 40039182
Alignment:
Q  8 catcgaaatactcatgtttccggatctgcaacgttgat 45  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40039145 catcgaaatagtcatgtttccggatctgcaacgttgat 40039182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 4042230 - 4042278
Alignment:
Q  291 atgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||||||||    
T  4042230 atgaaggaatgagaaaaaaagtttagagagaagttggagtttctctcac 4042278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 28872003 - 28872064
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||||||||||||||||| |||||| |||  ||||||||||  || ||||||||||||||    
T  28872003 ccactcatcctcgatgaatgaatgagaaaaaaa--ttagagagaatgtggagtttctctcacta 28872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 8809036 - 8809001
Alignment:
Q  304 aaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8809036 aaagaaagtttagagagaagttggagtttctctcac 8809001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 10929807 - 10929756
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||| |||| |||||||||||||||||||||  | ||||||||||||||||    
T  10929807 aatacacatgcttccggatctgcaacgttgatgtccaaatcattgattgaat 10929756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 11580972 - 11581003
Alignment:
Q  13 aaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||||||||||||||||||||||||||||    
T  11580972 aaatactcatgtttccggatctgcaacgttga 11581003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 39311143 - 39311194
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    |||||||||||||| |||||||||| |||||| ||||||  |||||||||||    
T  39311143 ctcgatgaatgaagaagaaagaaagcttagagcgaagttcgagtttctctca 39311194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 1421830 - 1421764
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  1421830 ctaaatcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 1421764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 4041540 - 4041582
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||| ||||||||||||||| || |||||||||||||||||    
T  4041540 ctaagttatcgaaatactcatgctttcggatctgcaacgttga 4041582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 11985179 - 11985245
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||  |||||||||||  ||| ||||||||||||||||  |||||||||||| |||| ||||    
T  11985179 ctaagtcactgaaatactcattcttctggatctgcaacgttgacacctaaatcattggttgagtttg 11985245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14955684 - 14955618
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaattt 67  Q
    ||||| |||||  ||||| |||||||| ||||||||||||||||  |  ||||||||||||||||||    
T  14955684 tctaaatcatcagaatacacatgtttctggatctgcaacgttgacgctcaaatcattgattgaattt 14955618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 31788610 - 31788544
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||  |||||||||||| || |||||||||||||||||   | ||||||||| |||||||||    
T  31788610 ctaagtcactgaaatactcatgctttcggatctgcaacgttgacgtccaaatcattgcttgaatttg 31788544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 36691707 - 36691653
Alignment:
Q  297 gaaggagaaagaaagtttagagagaa-gttgaagtttctctcactagaaatctag 350  Q
    ||||||||||||| ||||||| |||| |||| |||||||||||||||||| ||||    
T  36691707 gaaggagaaagaaggtttagaaagaaagttggagtttctctcactagaaaactag 36691653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 37416551 - 37416501
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    |||| ||||||| || ||| ||| |||||||||||||||||||||||||||    
T  37416551 tcgacgaatgaaagataaaaaaaatttagagagaagttgaagtttctctca 37416501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 38445016 - 38444982
Alignment:
Q  288 tcgatgaatgaaggagaaagaaagtttagagagaa 322  Q
    |||||||| ||||||||||||||||||||||||||    
T  38445016 tcgatgaacgaaggagaaagaaagtttagagagaa 38444982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 4264624 - 4264567
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgatt 61  Q
    ||||||||||||||| |||| |||| ||| || ||| |||| ||||||||||||||||    
T  4264624 aagtcatcgaaatacccatgcttccagatttggaacattgactcctaaatcattgatt 4264567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 7448400 - 7448359
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||||  |||||||||||| ||||||||||||||||||||    
T  7448400 taagtcactgaaatactcatgcttccggatctgcaacgttga 7448359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 9169205 - 9169246
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||| |||||||| |||| ||||||||||||||||||||    
T  9169205 taagtcaccgaaatacccatgcttccggatctgcaacgttga 9169246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 19062299 - 19062364
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| || |||||||| ||||||||   | |||||||||||||||||||    
T  19062299 taagtcaccgaaatacccatgctttcggatctgaaacgttgacgtccaaatcattgattgaatttg 19062364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 33585690 - 33585747
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||| |||||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  33585690 cgaattactcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttg 33585747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 37416731 - 37416678
Alignment:
Q  116 aacgtcgcacaagatgatgaacaataccacacctcacttagacgacagaatcac 169  Q
    |||||||||||||| || |||||| || ||||  ||||||||||||||||||||    
T  37416731 aacgtcgcacaagacgacgaacaacacaacacggcacttagacgacagaatcac 37416678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 38445319 - 38445254
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| || | ||||||||||||||||||||   | ||||||||| |||||||||    
T  38445319 taagtcaccgaaatacccacgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 38445254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 7677829 - 7677885
Alignment:
Q  12 gaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||| || ||||||||||||||||||  | ||||||||| |||||||||    
T  7677829 gaaatacccatgctttcggatctgcaacgttgatgtccaaatcattgcttgaatttg 7677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 18763500 - 18763448
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacga 160  Q
    |||||||||||| ||||||||| || |||||| || ||||| |||||||||||    
T  18763500 cgaaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacga 18763448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 25509314 - 25509373
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||||| |||| |||||||||| ||||||| |||||  ||||| ||||||||||||    
T  25509314 tcctcgatgaacgaagaagaaagaaag-ttagagaaaagtttgagtttttctcactagaaa 25509373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 36175693 - 36175737
Alignment:
Q  290 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttct 334  Q
    |||||||||||||||||||||  ||||||||||  ||||||||||    
T  36175693 gatgaatgaaggagaaagaaaacttagagagaatgtgaagtttct 36175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 35484595 - 35484698
Alignment:
Q  255 ttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcg 354  Q
    |||||||||||||| || ||   |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||     
T  35484595 ttaggtcaaaaaatgacctacaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagggcc 35484694  T
Q  355 ggct 358  Q
    ||||    
T  35484695 ggct 35484698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 7337910 - 7337983
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  7337910 tcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctttcactagaaaactagggccggct 7337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 358
Target Start/End: Original strand, 34878483 - 34878591
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||| | ||||||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||| |||    
T  34878483 tgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaagagaaagaaagtttaaagagaagttggagtttctctcactagaaaacta 34878582  T
Q  350 gggcgggct 358  Q
    |||| ||||    
T  34878583 gggccggct 34878591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 51916864 - 51916967
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    |||||||||||||||||||| | |||  |||| | ||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||| ||| |||    
T  51916864 tgattttaggtcaaaaaatagcctaaaaccacccctcctctatgaacgaaggagaaagaaagtttagagaaaaattgaagtttctctcactaaaaaacta 51916963  T
Q  350 gggc 353  Q
    ||||    
T  51916964 gggc 51916967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 44915536 - 44915430
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactcca-ctcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    |||||||||||||||||| | |||||||| || |||  ||| | | ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  44915536 tgtagagtgatgattttaagccaaaaaatgacctaaaaccaacccctcctcgatgaatgaatgagaaagaaagtttagagagaagttgaaatttttctca 44915437  T
Q  339 ctagaaa 345  Q
    |||||||    
T  44915436 ctagaaa 44915430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 45415449 - 45415344
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||| ||||||||| || |||  |||| | |||||||| || |||| |||||||||||||| |||||||||||||||||||||||    
T  45415449 tgtagaggggtgattctagatcaaaaaatgacctaaaaccacccctcctcgataaacgaagaagaaagaaagtttaaagagaagttgaagtttctctcac 45415350  T
Q  340 tagaaa 345  Q
    ||||||    
T  45415349 tagaaa 45415344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 250 - 350
Target Start/End: Original strand, 10776672 - 10776772
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| |  |||  |||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| |||    
T  10776672 tgattctaggtcaaaaaatgatctaaaaccacccttcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctccctaaaaaacta 10776771  T
Q  350 g 350  Q
    |    
T  10776772 g 10776772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 26535252 - 26535185
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  26535252 ccactcatccttgatgaacgaaggagagagaaagtttagagagaagttagagtttctctcactagaaa 26535185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 21947843 - 21947924
Alignment:
Q  263 aaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||| |||  |||| ||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||    
T  21947843 aaaaataacctaaaaccacccatcctcgatgaacgaag-agaaagaaagtttagagaaaaattgaagtttctctcactagaaa 21947924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 27456385 - 27456320
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctag 350  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||    
T  27456385 tcctcgacgaatgaaggagaaagaaagtttagaaagaagttgaagtttttctcactaaaaaactag 27456320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 31984054 - 31983957
Alignment:
Q  256 taggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggc 353  Q
    ||||||||||||| || |||  ||||   |||| ||||||  ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  31984054 taggtcaaaaaatgacctaaaaccacctctccttgatgaacaaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaatctagggc 31983957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 5983681 - 5983617
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||| |||||||    
T  5983681 tcctcgatgaacgaaggagaaataaagtttagagagaagttaaagtttctctctctaaaaatcta 5983617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 11462660 - 11462747
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||| |||||||||||||||| |||   ||| | || || ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  11462660 tgattctaggtcaaaaaataacctaaaatcacccctcgtcaatgaacgaaggagaaagaaagtttagagagaaattgaagtttctctc 11462747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 41177027 - 41176977
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctc 335  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  41177027 tcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 41176977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 44915777 - 44915676
Alignment:
Q  11 cgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaactaaacgtaca 104  Q
    ||||||||||||| ||||||||||||||| ||||  || ||||||||||||||||      |||||||||||  | |||||||||||||||||||| |||    
T  44915777 cgaaatactcatgcttccggatctgcaacattgacgcccaaatcattgattgaatttgtaattgactgatgttgatctttcaatatgaactaaacgaaca 44915678  T
Q  105 cc 106  Q
    ||    
T  44915677 cc 44915676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 29738838 - 29738935
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||| | ||||| ||||| ||||| | || |||  |||| | ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  29738838 tgtagaggggtgattctaggtaaaaaattgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagatgttggagtttctctc 29738935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 18939167 - 18939111
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||    
T  18939167 tcctcgattaatgaaggagaaagaaaacttagagagaaggtgaagtttctctcacta 18939111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 44543153 - 44543062
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||||| |||||| |||   ||| | |||||||||| |||| ||||| ||||  |||||||||||||| ||||||||||||||    
T  44543153 tgattttaggtcaaagaataacctaaaagcacccttcctcgatgagtgaaagagaaggaaaacttagagagaagttggagtttctctcacta 44543062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 352
Target Start/End: Complemental strand, 3228150 - 3228048
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||| ||||||| || |||  |||| | |||| ||||||||||||||||| ||| ||||| ||||||||| ||||| ||| |||||||| |||    
T  3228150 tgattgtaggttaaaaaatgacctaaaaccacccctccttgatgaatgaaggagaaataaaatttagggagaagttggagtttttctaactagaaaacta 3228051  T
Q  350 ggg 352  Q
    |||    
T  3228050 ggg 3228048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 13075612 - 13075666
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||||| | ||||||||||||||||  |||||||||||||||||||||||    
T  13075612 aatactcatgtcttcggatctgcaacgttgcctcctaaatcattgattgaatttg 13075666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 14872482 - 14872428
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||||||||| |||||||||||| ||| |||||||| ||||||||||||||    
T  14872482 ctcgatgaatgaagaagaaagaaagttcagaaagaagttggagtttctctcacta 14872428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 359
Target Start/End: Complemental strand, 1742161 - 1742052
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  ||||   |||| |||||| ||| ||||||| ||||||||| |||||||  |||||||||||||||||| |||    
T  1742161 tgattctaggtcaaaaaatgacctaaaaccaccattccttgatgaacgaaagagaaaggaagtttagaaagaagtttgagtttctctcactagaaaacta 1742062  T
Q  350 gggcgggctg 359  Q
     ||| |||||    
T  1742061 aggccggctg 1742052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16263009 - 16262945
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat 65  Q
    ||||| |||||  |||||||||| ||||||||||||||||||||| |  ||||||||||||||||    
T  16263009 tctaaatcatcagaatactcatgcttccggatctgcaacgttgatgcacaaatcattgattgaat 16262945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26535497 - 26535437
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgatt 61  Q
    ||||||||| || |||||||||| ||||||||||||||||||||  || ||||||||||||    
T  26535497 tctaagtcaccggaatactcatgcttccggatctgcaacgttgaagcccaaatcattgatt 26535437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 940233 - 940154
Alignment:
Q  262 aaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||| ||||||  ||||||||||||||||||  || |||||||||| ||||||||||| ||  ||||| ||||||||    
T  940233 aaaaaatgacttaaaaccactcatcctcgatgaagaaaagagaaagaaaatttagagagaatttagagtttttctcacta 940154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 51916610 - 51916676
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||  |  |||||||||||||||||||    
T  51916610 tctaagtca-cgaaatactcatgcttccgtatctgcaacgttgacgctcaaatcattgattgaatttg 51916676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 14872786 - 14872720
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| | |||||| |||| ||||||||||||||||||||  || ||||||||| |||||||||    
T  14872786 ctaagtcaccaaaatacccatgcttccggatctgcaacgttgacgcccaaatcattggttgaatttg 14872720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 15435074 - 15435172
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctca 338  Q
    ||||||| | ||||| ||| ||||||||| || |||  || | | |||| ||||||||||| |||||||| |||| ||||||||||| |||||||||||    
T  15435074 tgtagagggttgattctagatcaaaaaatgacctaaaaccgcccctccttgatgaatgaagaagaaagaaggttttgagagaagttggagtttctctca 15435172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 940388 - 940327
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgacagaatcac 169  Q
    |||||||||||||||||||||| ||  ||||| || ||||| |||||||||||| |||||||    
T  940388 cgaaatcaaacgtcgcacaagacgacaaacaacacaacaccgcacttagacgacggaatcac 940327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 5983982 - 5983917
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| ||||||||||||| ||||||  || ||||||||| |||||||||    
T  5983982 taagtcaccgaaatacccatgcttccggatctgcagcgttgacgcccaaatcattggttgaatttg 5983917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 7836978 - 7837059
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtt 331  Q
    ||||| ||| ||||||||| || |||  |||| | ||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  7836978 tgattctagatcaaaaaatgacctaaaaccacccttcctcgatgaacgaaagagaaagaaggtttagagagaagttggagtt 7837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 21947564 - 21947629
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  21947564 taagtcaccgaaatattcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 21947629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 23291587 - 23291762
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg------actgatgtctacctttcaatatgaact 95  Q
    |||||||| |||||| | |||| |||||||||| |||||||||| || ||||||||| |||||||||      ||||||| | | ||||||||| ||| |    
T  23291587 ctaagtcaccgaaattcacatgcttccggatcttcaacgttgatgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaat 23291686  T
Q  96 aaacgtacaccacga----------aatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    ||||| ||||| |||          |||||||||||||||||||| |||||||| || || ||  |||||||||||    
T  23291687 aaacgaacaccgcgacaagaagcgaaatcaaacgtcgcacaagataatgaacaacacaacgccgtacttagacgac 23291762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 31984308 - 31984247
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattga 63  Q
    |||||||| |||||||| |||| |||||||| |||||||||||  || ||||||||||||||    
T  31984308 ctaagtcaccgaaatacccatgcttccggatttgcaacgttgacgcccaaatcattgattga 31984247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 352
Target Start/End: Original strand, 32679304 - 32679413
Alignment:
Q  243 agagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactag 342  Q
    |||| ||||||| || |||||||||| || |||  |||| | ||||||| || |||| ||||||||||  ||||||| |||||| | ||||||||||||     
T  32679304 agagggatgattctatgtcaaaaaatgacataaaaccacccctcctcgacgagtgaaagagaaagaaaacttagagaaaagttggaatttctctcactaa 32679403  T
Q  343 aaatctaggg 352  Q
    ||| ||||||    
T  32679404 aaaactaggg 32679413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 36775668 - 36775721
Alignment:
Q  15 atactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||| |||||||| ||||||||||||||||  || |||||||||||||||||||    
T  36775668 atacccatgtttctggatctgcaacgttgacgcccaaatcattgattgaatttg 36775721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 49626790 - 49626701
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||||||||||| ||| || |||  |||| | |||||||||| |||| ||||| |||   |||||||||||||| ||||||||||||    
T  49626790 tgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaaggaacacttagagagaagttggagtttctctcac 49626701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 21686718 - 21686662
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||| ||| |||||||||| |||||| | |||||| ||||||||||||||    
T  21686718 tcctcgatgaacgaaagagaaagaaaatttagaaaaaagttgcagtttctctcacta 21686662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 358
Target Start/End: Complemental strand, 45789445 - 45789337
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||||||||| || |||  |||   ||||||||||||||||| ||||| ||| |||||||||||  |  |||||||||||||| ||| |||    
T  45789445 tgattctaggtcaaaaaatgacctaaaaccatcaatcctcgatgaatgaagtagaaataaaatttagagagaacgtagagtttctctcactaaaaaacta 45789346  T
Q  350 gggcgggct 358  Q
     ||| ||||    
T  45789345 aggccggct 45789337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 340
Target Start/End: Original strand, 569031 - 569085
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 340  Q
    |||| ||||| |||| |||||||||| |||| ||||||||||||||||||||||||    
T  569031 tcctagatgagtgaaagagaaagaaa-tttatagagaagttgaagtttctctcact 569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 12635047 - 12634944
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatcta 349  Q
    ||||| ||||||| ||||| || |||  |||| ||||||||| || |||| |||||| |||   ||||||||||||  |||||||||||||| ||| |||    
T  12635047 tgattataggtcagaaaatgacctaaaaccacacatcctcgacgagtgaaagagaaaaaaaacatagagagaagtttgagtttctctcactaaaaaacta 12634948  T
Q  350 gggc 353  Q
    ||||    
T  12634947 gggc 12634944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27580072 - 27580139
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| ||||||||||||| || || |||||||| |||||  || |||||||| ||||||||||    
T  27580072 tctaagtcaccgaaatactcatgctttcgaatctgcaatgttgacgcccaaatcatttattgaatttg 27580139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 31918847 - 31918772
Alignment:
Q  262 aaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    |||||| |||||||  |||| | ||||||| |||| || | |||||||||||||||||||| ||||||||| ||||    
T  31918847 aaaaaaaaacttaaaaccacccctcctcgacgaataaatgtgaaagaaagtttagagagaaattgaagtttttctc 31918772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 38783351 - 38783320
Alignment:
Q  8 catcgaaatactcatgtttccggatctgcaac 39  Q
    ||||||||||||||||||||||||||||||||    
T  38783351 catcgaaatactcatgtttccggatctgcaac 38783320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 43412217 - 43412162
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 340  Q
    ||||||||||||||| |||||||| |  ||||||| |||||||||||| |||||||    
T  43412217 tcctcgatgaatgaaagagaaagagaagttagagataagttgaagtttttctcact 43412162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 3228416 - 3228350
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||| |||||||||||  |||| || |||||||||||||||||  || ||||||||||||| |||||    
T  3228416 ctaaatcatcgaaatatccatgatttcggatctgcaacgttgacgcccaaatcattgattgtatttg 3228350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 4413261 - 4413219
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||    
T  4413261 ctaagtcaccgaaatattcatgcttccggatctgcaacgttga 4413219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 10776406 - 10776472
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||| ||||||||||||| ||| |||||||||| |||||   | ||||||||||||| |||||    
T  10776406 ctaagtcaccgaaatactcatgcttctggatctgcaatgttgacgtccaaatcattgattggatttg 10776472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 47551373 - 47551343
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttga 44  Q
    |||||||||||||||||||||||||||||||    
T  47551373 aatactcatgtttccggatctgcaacgttga 47551343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 1742306 - 1742253
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacgac 161  Q
    |||||||||||||||||||||| || |||||| || || || ||||||||||||    
T  1742306 cgaaatcaaacgtcgcacaagacgacgaacaacacaacgccgcacttagacgac 1742253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 4413154 - 4413097
Alignment:
Q  280 actcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    |||| |||||||| || |||| |||||||||||||||||| |||||  ||||||||||    
T  4413154 actcctcctcgataaacgaagaagaaagaaagtttagagaaaagttagagtttctctc 4413097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 32873811 - 32873868
Alignment:
Q  4 aagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgatt 61  Q
    |||| |||||||||| |||||||| ||||||||||| ||||  | |||||||||||||    
T  32873811 aagtgatcgaaatacccatgtttctggatctgcaacattgacgcttaaatcattgatt 32873868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 35461995 - 35462036
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||| |||||||| |||| ||||||||||||||||||||    
T  35461995 taagtcaccgaaatacacatgcttccggatctgcaacgttga 35462036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 35462297 - 35462358
Alignment:
Q  297 gaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaatctagggcgggct 358  Q
    ||||||||||||||||||||||| |||||  |||||||| ||||| ||| ||| ||| ||||    
T  35462297 gaaggagaaagaaagtttagagataagttagagtttctcccactaaaaaactaaggccggct 35462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 7836863 - 7836915
Alignment:
Q  108 cgaaatcaaacgtcgcacaagatgatgaacaataccacacctcacttagacga 160  Q
    |||||||||||||||||||||| || |||||| || || || |||||||||||    
T  7836863 cgaaatcaaacgtcgcacaagacgacgaacaacacaacgccgcacttagacga 7836915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 31317595 - 31317559
Alignment:
Q  286 cctcgatgaatgaaggagaaagaaagtttagagagaa 322  Q
    |||||||||||||| |||||||||| |||||||||||    
T  31317595 cctcgatgaatgaaagagaaagaaaatttagagagaa 31317559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 32394886 - 32394818
Alignment:
Q  243 agagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaag 311  Q
    |||| ||||||| || |||||||||| || |||  |||| | ||||||||||| |||||||||||||||    
T  32394886 agagggatgattctaagtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaag 32394818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 46589428 - 46589396
Alignment:
Q  12 gaaatactcatgtttccggatctgcaacgttga 44  Q
    ||||||||||||| |||||||||||||||||||    
T  46589428 gaaatactcatgtgtccggatctgcaacgttga 46589396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 32950 - 33068
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| || |||||||||| || |||  |||||| |||||||| || |||| ||||||||||||||||||||||||  ||||||||||||    
T  32950 tgtagaggggtgattctatgtcaaaaaatgacctaaaaccactcctcctcgataaacgaagaagaaagaaagtttagagagaagttagagtttctctcac 33049  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||||||||    
T  33050 tagaaaactagggcgggct 33068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32691 - 32758
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||   | ||||||||| |||||||||    
T  32691 tctaagtcaccgaaatactcatgcttccagatctgcaacgttgacgtccaaatcattgcttgaatttg 32758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 2174 - 2271
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 337  Q
    ||||||| | ||||| ||| ||||||||| ||||||  |||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  2174 tgtagaggggtgattctagatcaaaaaatgacttaaaaccactcctcctcgatgaacgaaggagaaaaaaagtttagagagaagttggagtttctctc 2271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 1918 - 1984
Alignment:
Q  2 ctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||| ||| ||||||||| |||||| |||||||||||||||||  || ||| ||||| |||||||||    
T  1918 ctaaatcaccgaaatacttatgttttcggatctgcaacgttgacgcccaaaccattggttgaatttg 1984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 352
Target Start/End: Complemental strand, 1230 - 1119
Alignment:
Q  241 gtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 340  Q
    |||||| | ||||| ||||||||||||| || |||  ||||   ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  1230 gtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaaatttagagagaagttgaagtttcactcact 1131  T
Q  341 agaaatctaggg 352  Q
    | ||| ||||||    
T  1130 aaaaaactaggg 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 50673 - 50555
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| ||||||| ||||||||||| | || |||   ||| | ||||| ||||| ||||||||||||||||||||| |||||||| |||||||| |||    
T  50673 tgtagagggatgattctaggtcaaaaagtgacctaaaatcacccctcctcaatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 50574  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  50573 tagaaaactagggccggct 50555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 50919 - 50854
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||  |||| ||||||||||||||||||||   | ||||||||| |||||||||    
T  50919 taagtcaccgaaatatccatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttg 50854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 8401 - 8283
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||||||||||  |||| | |||||||||||   |   ||||||||||||| |||||||||||||| ||||||||    
T  8401 tgtagaggggtgattataggtcaaaaaataacttaaaaccacccctcctcgatgaacagatttgaaagaaagtttatagagaagttgaagtgtctctcac 8302  T
Q  340 tagaaatctagggcgggct 358  Q
    || ||| ||||||| ||||    
T  8301 taaaaaactagggcaggct 8283  T

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Target: scaffold0087 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 25531 - 25649
Alignment:
Q  240 tgtagagtgatgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcac 339  Q
    ||||||| | ||||| ||||||||||||| || |||  |||| | ||||||||||| ||||||||||     |||||||| |||||||||||||||||||    
T  25531 tgtagaggggtgattataggtcaaaaaatgacataaaaccacccctcctcgatgaacgaaggagaaaatttttttagagaaaagttgaagtttctctcac 25630  T
Q  340 tagaaatctagggcgggct 358  Q
    |||||| ||||||| ||||    
T  25631 tagaaaactagggccggct 25649  T

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Target: scaffold0262 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 1765 - 1830
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    |||||||||||||||| |||| ||||||||||||||||||| | || |||||||||||||||||||    
T  1765 taagtcatcgaaatacccatgcttccggatctgcaacgttggtgcccaaatcattgattgaatttg 1830  T

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Target: scaffold0262; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 2064 - 2120
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||| |||||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  2064 tcctcaatgaatgaagaagaaagaaagttttgaaagaagttggagtttctctcacta 2120  T

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Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 71244 - 71359
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaat------ttgactgatgtctacctttcaatatgaac 94  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||  ||  |||||||||||||||      |||||||||| | | |||| |||| ||||    
T  71244 tctaagtcatcaaaatacccatgcttccggatctgcaacgttgacaccccaatcattgattgaatttataattgactgatgccgatctttaaataggaac 71343  T
Q  95 taaacgtacaccacga 110  Q
    |||||| |||||||||    
T  71344 taaacgaacaccacga 71359  T

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Target: scaffold0154 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 336
Target Start/End: Complemental strand, 25171 - 25124
Alignment:
Q  289 cgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctct 336  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  25171 cgatgaatgaaagagaaagaaagtttagagaaaagttgaagtttctct 25124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 37881 - 37814
Alignment:
Q  278 ccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaa 345  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||| | || ||||||||| ||||||    
T  37881 ccactcatcttcgatgaatgaaggagaaagaaaacttagagagaaggtaaaatttctctcattagaaa 37814  T

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Target: scaffold0136; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 9997 - 10053
Alignment:
Q  12 gaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||||||||||||||| ||  ||||||||| |||||||||    
T  9997 gaaatacacatgtttctggatctgcaacgttgactctcaaatcattggttgaatttg 10053  T

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Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31218 - 31285
Alignment:
Q  1 tctaagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||||| |||||||| |||| ||||||||||||||| ||||| |  ||||| |||||||||||||    
T  31218 tctaagtcaccgaaatacccatgcttccggatctgcaacattgatgctcaaatcgttgattgaatttg 31285  T

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Target: scaffold0121; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 31520 - 31565
Alignment:
Q  287 ctcgatgaatgaaggagaaagaaagtttagagagaagttgaagttt 332  Q
    ||||||||| ||||||||||||||||||| ||| |||||| |||||    
T  31520 ctcgatgaacgaaggagaaagaaagtttaaagaaaagttggagttt 31565  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 58291 - 58382
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    ||||||||||||||||||| || |||  |||| | ||||||| || |||| || || ||||  |||||||||||||| ||||||||||||||    
T  58291 tgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgagtgaaagaaaacgaaaacttagagagaagttggagtttctctcacta 58382  T

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Target: scaffold0554 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 10721 - 10672
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttct 334  Q
    ||||||||||||||||||| ||| |||||||||||||||||  |||||||    
T  10721 tcctcgatgaatgaaggaggaagcaagtttagagagaagttagagtttct 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 65988 - 66053
Alignment:
Q  3 taagtcatcgaaatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||||| |||||||| |||| |||||||||||||||||||   || ||||||||| |||||||||    
T  65988 taagtcaccgaaatacccatgcttccggatctgcaacgttggcacccaaatcattggttgaatttg 66053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 19283 - 19338
Alignment:
Q  285 tcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcacta 341  Q
    |||||||||| |||| |||||||||| || |||||||||||| ||||||||||||||    
T  19283 tcctcgatgagtgaaagagaaagaaaatt-agagagaagttggagtttctctcacta 19338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 1635 - 1689
Alignment:
Q  14 aatactcatgtttccggatctgcaacgttgattcctaaatcattgattgaatttg 68  Q
    ||||| |||||||| |||||| | |||||||| || |||||||||||||||||||    
T  1635 aatacccatgtttctggatctactacgttgatacccaaatcattgattgaatttg 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 7594 - 7521
Alignment:
Q  250 tgattttaggtcaaaaaataacttaactccactcatcctcgatgaatgaaggagaaagaaagtttagagagaag 323  Q
    ||||| ||||||||||||| || |||  |||  | |||||||||||| |||||||||||||  |||||||||||    
T  7594 tgattctaggtcaaaaaatgacctaaaaccatccctcctcgatgaataaaggagaaagaaaacttagagagaag 7521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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